BLASTX nr result

ID: Ephedra28_contig00016139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00016139
         (468 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317765.2| hypothetical protein POPTR_0012s01870g [Popu...    59   9e-07
ref|XP_002333423.1| predicted protein [Populus trichocarpa] gi|5...    57   3e-06
ref|XP_006848274.1| hypothetical protein AMTR_s00013p00075010 [A...    55   7e-06

>ref|XP_002317765.2| hypothetical protein POPTR_0012s01870g [Populus trichocarpa]
           gi|550326179|gb|EEE95985.2| hypothetical protein
           POPTR_0012s01870g [Populus trichocarpa]
          Length = 441

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
 Frame = +3

Query: 135 IDVEEL-QEIRQKRTGGLRISF-ANVCIFEVPTSLKDLKKDVYVPKVVGLGPLHHDDTLP 308
           I +E+L Q+I       L  SF +  CI+EVPT+L+D K+D Y P+V+ +GP+HH     
Sbjct: 12  IPIEKLRQDILIIIRDDLETSFRSEQCIYEVPTALRDRKEDAYTPRVISIGPIHHYSEKL 71

Query: 309 RVNQLKKEAVLRTLIKIYRSDTLPNALEKLRNEVMMMKEQIQDCY 443
              +++K   L+   ++         LE L   +   ++ I+ CY
Sbjct: 72  VAMEIQKRRYLKEFCRLRVEKEQEELLETLLRTISSQEDHIRRCY 116


>ref|XP_002333423.1| predicted protein [Populus trichocarpa]
           gi|566258883|ref|XP_006389013.1| hypothetical protein
           POPTR_0061s00220g [Populus trichocarpa]
           gi|550311587|gb|ERP47927.1| hypothetical protein
           POPTR_0061s00220g [Populus trichocarpa]
          Length = 441

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
 Frame = +3

Query: 135 IDVEEL-QEIRQKRTGGLRISF-ANVCIFEVPTSLKDLKKDVYVPKVVGLGPLHHDDTLP 308
           I +E+L Q+I       L  SF +  CI+EVP++L+D K+D Y P+V+ +GP+HH     
Sbjct: 12  IPIEKLRQDILIIIRDDLETSFRSEQCIYEVPSALRDRKEDAYTPRVISIGPIHHYSEKL 71

Query: 309 RVNQLKKEAVLRTLIKIYRSDTLPNALEKLRNEVMMMKEQIQDCY 443
              +++K   L+   ++         LE L   +   ++ I+ CY
Sbjct: 72  VAMEIQKRRYLKEFCRLRVEKEQEELLETLLRTISSQEDHIRRCY 116


>ref|XP_006848274.1| hypothetical protein AMTR_s00013p00075010 [Amborella trichopoda]
           gi|548851580|gb|ERN09855.1| hypothetical protein
           AMTR_s00013p00075010 [Amborella trichopoda]
          Length = 432

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
 Frame = +3

Query: 207 CIFEVPTSLKDLKKDVYVPKVVGLGPLHHDDT-LPRVNQLKKEAVLRTLIKIYRSDTLPN 383
           CI++VP  LK+L K+ ++P+VV LGP HH    L  + Q K+ A+L  L      D   +
Sbjct: 37  CIYKVPGFLKELHKEAFIPRVVSLGPFHHGSPHLQPMEQHKRRALLHFL------DRSNH 90

Query: 384 ALEKLRNEVMMMKEQIQDCYETPFSFDP 467
            L+     +   ++ I+DCYE P    P
Sbjct: 91  PLQVYLTALQAKEQVIRDCYEWPNDLAP 118


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