BLASTX nr result
ID: Ephedra28_contig00015946
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00015946
(1147 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006659857.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 145 4e-32
ref|XP_006306613.1| hypothetical protein CARUB_v10008128mg [Caps... 144 9e-32
ref|XP_002301895.1| DEAD/DEAH box helicase family protein [Popul... 144 9e-32
ref|XP_002307002.2| hypothetical protein POPTR_0005s27880g [Popu... 141 4e-31
ref|XP_006659123.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 141 6e-31
ref|NP_173516.1| DEAD Box RNA Helicase RCF1 [Arabidopsis thalian... 140 1e-30
ref|XP_006416348.1| hypothetical protein EUTSA_v10006608mg [Eutr... 138 5e-30
gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase fami... 138 5e-30
ref|XP_004972780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 137 6e-30
ref|XP_006349887.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 136 2e-29
ref|XP_004252969.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 136 2e-29
ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putativ... 135 2e-29
gb|ESW29025.1| hypothetical protein PHAVU_002G037900g [Phaseolus... 135 4e-29
ref|XP_002445101.1| hypothetical protein SORBIDRAFT_07g004090 [S... 135 4e-29
gb|EMT07306.1| DEAD-box ATP-dependent RNA helicase 42 [Aegilops ... 134 5e-29
gb|EXB56258.1| DEAD-box ATP-dependent RNA helicase 42 [Morus not... 133 1e-28
gb|EMS64519.1| DEAD-box ATP-dependent RNA helicase 42 [Triticum ... 133 1e-28
ref|NP_187573.1| DEAD-box ATP-dependent RNA helicase 45 [Arabido... 133 1e-28
dbj|BAF01843.1| putative RNA helicase [Arabidopsis thaliana] 133 1e-28
ref|XP_004485495.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 133 2e-28
>ref|XP_006659857.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Oryza
brachyantha]
Length = 1022
Score = 145 bits (365), Expect = 4e-32
Identities = 97/252 (38%), Positives = 125/252 (49%), Gaps = 39/252 (15%)
Frame = -2
Query: 639 SRRKSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDNGGNEAKE- 463
+R + E+ DEE E+R++ E EQ++LDEEME RRRR++EWQEM+R++ + E +E
Sbjct: 118 AREEEEEVDEEEAERRRQKKKEEEQQQLDEEMETRRRRIKEWQEMKRREEETKRREQQES 177
Query: 462 -----------------GKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP 334
GK WTL
Sbjct: 178 GVGTSAAATGADDGGNAGKKWTLDGEESDEEGDKEDAKKSDDNGGSGAGI---------- 227
Query: 333 MDVD-KNGTA---------DDDEIDPLDAFMNSLVVPEATPQENM-----------TKKD 217
MDVD +NG + +DDEIDPLDAFMNS+V+PE E+M + KD
Sbjct: 228 MDVDTQNGDSNANGATAMDEDDEIDPLDAFMNSMVLPEVAKLESMPTANVDDKNDKSVKD 287
Query: 216 VAKDDNKNIPKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIV 37
D +K PK +GRI QGEDSD + D EFMKRVKK+KVEKL+IV
Sbjct: 288 AVTDGDKKGPKKVMGRIIQGEDSDSDYDDDVDDEDGSEDEDDEEFMKRVKKTKVEKLAIV 347
Query: 36 DHSKVQYIPFRK 1
DHSK+ Y PFRK
Sbjct: 348 DHSKIDYQPFRK 359
>ref|XP_006306613.1| hypothetical protein CARUB_v10008128mg [Capsella rubella]
gi|565497950|ref|XP_006306614.1| hypothetical protein
CARUB_v10008128mg [Capsella rubella]
gi|565497952|ref|XP_006306615.1| hypothetical protein
CARUB_v10008128mg [Capsella rubella]
gi|482575324|gb|EOA39511.1| hypothetical protein
CARUB_v10008128mg [Capsella rubella]
gi|482575325|gb|EOA39512.1| hypothetical protein
CARUB_v10008128mg [Capsella rubella]
gi|482575326|gb|EOA39513.1| hypothetical protein
CARUB_v10008128mg [Capsella rubella]
Length = 1171
Score = 144 bits (362), Expect = 9e-32
Identities = 93/244 (38%), Positives = 122/244 (50%), Gaps = 32/244 (13%)
Frame = -2
Query: 636 RRKSEDSDEEAREKR-KKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRK--------KNDN 484
+RKS + D E +EK+ +++++E EQK+LDEE+EKRRRRVQEWQE++RK K D
Sbjct: 255 KRKSVEEDGEKKEKKTREEELEDEQKKLDEEVEKRRRRVQEWQELKRKQEEAENEIKGDG 314
Query: 483 GGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK----- 319
G E K GK WTL ++ +
Sbjct: 315 DGKEPKAGKAWTLDGESDDEEGHQEEKSETEMDVDGESKPESGGDAKIVDLENETATTVP 374
Query: 318 ----NGTADDDEIDPLDAFMNSLVVPEATPQENMTKKDVAKD----------DNKNIPKS 181
+G AD+DEIDPLDAFMN++V+PE N D D+ + PK
Sbjct: 375 ESGGDGAADEDEIDPLDAFMNTMVLPEVEKLSNSAPSPAVNDGILDSKMNGKDSGDQPKK 434
Query: 180 ----KVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKVQYI 13
+GRI QGEDSD + EFMKRVKK+K EKLS+VDHSK++Y
Sbjct: 435 GFNKALGRIIQGEDSDSDYSEPKDDDDPSLEEDDEEFMKRVKKTKAEKLSLVDHSKIEYE 494
Query: 12 PFRK 1
PFRK
Sbjct: 495 PFRK 498
>ref|XP_002301895.1| DEAD/DEAH box helicase family protein [Populus trichocarpa]
gi|222843621|gb|EEE81168.1| DEAD/DEAH box helicase
family protein [Populus trichocarpa]
Length = 1112
Score = 144 bits (362), Expect = 9e-32
Identities = 100/250 (40%), Positives = 125/250 (50%), Gaps = 38/250 (15%)
Frame = -2
Query: 636 RRKSEDSDEEAREK----RKKDD------MEAEQKRLDEEMEKRRRRVQEWQEMRRKKND 487
R S DSD++++++ R++DD +E EQK+LDEEMEKRRRRVQEWQE+RRKK +
Sbjct: 205 RELSSDSDDDSKDRDKKRRRRDDDDYKERLEQEQKKLDEEMEKRRRRVQEWQELRRKKEE 264
Query: 486 NGG---------NEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP 334
NE K GKTWTL
Sbjct: 265 TEREKHGEEADVNEPKTGKTWTLEGESDDEEAPPTGKSETD------------------- 305
Query: 333 MDVDKNGTADDDEIDPLDAFMNSLVVPEATPQENMTKKDVAKDDNKNIPKSK-------- 178
MD+++N D++EIDPLDAFMNS+V+PE + N T DDNK K+K
Sbjct: 306 MDLEENAKPDEEEIDPLDAFMNSMVLPEVE-KLNSTLVTHTADDNKTDLKNKDKKEERIN 364
Query: 177 -----------VGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDH 31
+GRI GEDSD + EFMKRVKK+K EKLSIVDH
Sbjct: 365 GEQRKKGSHKSLGRIVPGEDSDSDYGDLENGEDPLEEEDDDEFMKRVKKTKAEKLSIVDH 424
Query: 30 SKVQYIPFRK 1
SK+ Y PFRK
Sbjct: 425 SKIDYNPFRK 434
>ref|XP_002307002.2| hypothetical protein POPTR_0005s27880g [Populus trichocarpa]
gi|550339899|gb|EEE93998.2| hypothetical protein
POPTR_0005s27880g [Populus trichocarpa]
Length = 1073
Score = 141 bits (356), Expect = 4e-31
Identities = 99/251 (39%), Positives = 123/251 (49%), Gaps = 37/251 (14%)
Frame = -2
Query: 642 NSRRKSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKK----NDNGGN 475
+ +R+ E + RE+R++D++E EQK+LDEEMEKRRRRVQEWQE+RRKK ++ GG
Sbjct: 147 SGKREREREKDRERERREQDELEEEQKKLDEEMEKRRRRVQEWQELRRKKEETESEKGGE 206
Query: 474 EA-----KEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDKNGT 310
EA K GKTWTL +D + + +
Sbjct: 207 EANVDESKSGKTWTLEGESDDEEAPPTGKSDMDIDQEENAIPDKEAGDAMV-VDTENDIS 265
Query: 309 A---------DDDEIDPLDAFMNSLVVPEATPQENMTKKDVAKDDNKNIPKSK------- 178
A D+EIDPLDAFMNS+V+PE N A DDNK K K
Sbjct: 266 APQSEVDAVNGDEEIDPLDAFMNSMVLPEVEMLNNAVVTQTA-DDNKADSKKKDKNDEGI 324
Query: 177 ------------VGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVD 34
+GRI GEDSD + EFMKRVKK+K EKLSIVD
Sbjct: 325 NGGQRKKGSHKSLGRIIPGEDSDSDHGDLENSEVPLEDEDDDEFMKRVKKTKAEKLSIVD 384
Query: 33 HSKVQYIPFRK 1
HSK+ Y PFRK
Sbjct: 385 HSKIDYSPFRK 395
>ref|XP_006659123.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Oryza
brachyantha]
Length = 1068
Score = 141 bits (355), Expect = 6e-31
Identities = 96/257 (37%), Positives = 121/257 (47%), Gaps = 44/257 (17%)
Frame = -2
Query: 639 SRRKSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKND--------- 487
+R E+ DEE E+R++ E EQKRLDEEME RRRRV+EWQEM+R + +
Sbjct: 157 AREVEEEVDEEEAERRRQKRKEEEQKRLDEEMELRRRRVKEWQEMKRLQEEAKRLEQEEE 216
Query: 486 ------------------NGGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361
NG +A GK WTL
Sbjct: 217 ARAGDGASTAAATTTAEANGDGDANAGKKWTLDGEESDEEGSKEDAEKTQDSGGVTTDLP 276
Query: 360 XXXXXXXAPMDVDKNGTA--DDDEIDPLDAFMNSLVVPE------------ATPQENMTK 223
D NG A ++D+IDPLDAFMNS+V+PE +TP NM
Sbjct: 277 NVVN--------DANGAAAMEEDDIDPLDAFMNSMVLPEVAKLETVVASMGSTPAANMDD 328
Query: 222 KD---VAKDDNKNIPKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVE 52
K+ + +K +PK +GRI QG+DSD + D EFMKRVKK+KVE
Sbjct: 329 KNGKSTVSNGDKKVPKKAMGRIMQGDDSDSDYDDDEDDEGGSEDEDDEEFMKRVKKTKVE 388
Query: 51 KLSIVDHSKVQYIPFRK 1
KL IVDHSK+ Y PFRK
Sbjct: 389 KLVIVDHSKIDYQPFRK 405
>ref|NP_173516.1| DEAD Box RNA Helicase RCF1 [Arabidopsis thaliana]
gi|108861895|sp|Q8H0U8.2|RH42_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 42; AltName:
Full=DEAD-box RNA helicase RCF1; AltName: Full=REGULATOR
OF CBF GENE EXPRESSION 1
gi|4836896|gb|AAD30599.1|AC007369_9 Similar to RNA
helicases [Arabidopsis thaliana]
gi|332191919|gb|AEE30040.1| DEAD Box RNA Helicase RCF1
[Arabidopsis thaliana]
Length = 1166
Score = 140 bits (352), Expect = 1e-30
Identities = 90/244 (36%), Positives = 120/244 (49%), Gaps = 32/244 (13%)
Frame = -2
Query: 636 RRKSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKN--------DNG 481
R+ ED+ E+ +K +++++E EQK+LDEE+EKRRRRVQEWQE++RKK D
Sbjct: 249 RKSVEDNGEKKEKKTREEELEDEQKKLDEEVEKRRRRVQEWQELKRKKEEAESESKGDAD 308
Query: 480 GNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK------ 319
GNE K GK WTL ++ +
Sbjct: 309 GNEPKAGKAWTLEGESDDEEGHPEEKSETEMDVDEETKPENDGDAKMVDLENETAATVSE 368
Query: 318 ---NGTADDDEIDPLDAFMNSLVVPEA---------------TPQENMTKKDVAKDDNKN 193
+G D++EIDPLDAFMN++V+PE T M K+ K
Sbjct: 369 SGGDGAVDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNGKESGDRPKKG 428
Query: 192 IPKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKVQYI 13
K+ +GRI QGEDSD + EFMKRVKK+K EKLS+VDHSK++Y
Sbjct: 429 FNKA-LGRIIQGEDSDSDYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYE 487
Query: 12 PFRK 1
PFRK
Sbjct: 488 PFRK 491
>ref|XP_006416348.1| hypothetical protein EUTSA_v10006608mg [Eutrema salsugineum]
gi|567149382|ref|XP_006416349.1| hypothetical protein
EUTSA_v10006608mg [Eutrema salsugineum]
gi|557094119|gb|ESQ34701.1| hypothetical protein
EUTSA_v10006608mg [Eutrema salsugineum]
gi|557094120|gb|ESQ34702.1| hypothetical protein
EUTSA_v10006608mg [Eutrema salsugineum]
Length = 1166
Score = 138 bits (347), Expect = 5e-30
Identities = 96/245 (39%), Positives = 122/245 (49%), Gaps = 33/245 (13%)
Frame = -2
Query: 636 RRKSEDSDEEAREKR-KKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKN--------DN 484
RRK+ + D E +EK+ +++++E EQK+LDEEMEKRRRRVQEWQE++RKK D
Sbjct: 251 RRKTGEEDGEKKEKKTREEELEDEQKKLDEEMEKRRRRVQEWQELKRKKEEAESESKGDA 310
Query: 483 GGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK----- 319
E K GK WTL +DV+
Sbjct: 311 DDKEPKAGKAWTLEGESDDEECHPEEKTETEMDVDGETKPENGGDAKM--VDVENAMSTT 368
Query: 318 ------NGTADDDEIDPLDAFMNSLVVPEATPQENMTK---KDVAKDDNKN------IPK 184
+G AD++EIDPLDAFMN++V+PE N KD D KN PK
Sbjct: 369 VSEKGGDGAADEEEIDPLDAFMNAMVLPEVEKLSNSAPPVVKDGILDSEKNGKERGDQPK 428
Query: 183 S----KVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKVQY 16
+GRI QGEDSD + EFMKRVKK+K EKLS+VDHSK++Y
Sbjct: 429 KGFNKSLGRIMQGEDSDSDYSEPKDDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEY 488
Query: 15 IPFRK 1
FRK
Sbjct: 489 ESFRK 493
>gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 1065
Score = 138 bits (347), Expect = 5e-30
Identities = 94/250 (37%), Positives = 122/250 (48%), Gaps = 37/250 (14%)
Frame = -2
Query: 639 SRRKSEDSDEEA---REKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDNGGNEA 469
SR + E EEA R+++K++DMEAEQ+RLD+EME+RRRRV+EWQE RR++ G+ A
Sbjct: 158 SREEEEVDAEEAERRRQRKKEEDMEAEQQRLDDEMERRRRRVKEWQEKRREQQQQDGSVA 217
Query: 468 --------------KEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPM 331
K GK WTL
Sbjct: 218 SGASAAVAAEADGAKAGKKWTLDGEESDEEEDKEDGKKAEGNGGAGDMDVGLPSGNG--- 274
Query: 330 DVDKNGTAD--DDEIDPLDAFMNSLVVPEATPQENM------------------TKKDVA 211
D NG A+ +DEIDPLDAFMNS+V+PE E+ + KDV
Sbjct: 275 --DANGGAEMEEDEIDPLDAFMNSMVLPEVAKLESAAVAMDTAPAAGADGKNGKSSKDVI 332
Query: 210 KDDNKNIPKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDH 31
+ +K + GRI QG+DSD + D EF+KRVKK+K EKL+IVDH
Sbjct: 333 SNGDKKGSRKATGRIMQGDDSDSDYDDADDDGAGEDDEDDEEFIKRVKKTKAEKLAIVDH 392
Query: 30 SKVQYIPFRK 1
SK+ Y PFRK
Sbjct: 393 SKIDYQPFRK 402
>ref|XP_004972780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform X1
[Setaria italica]
Length = 1065
Score = 137 bits (346), Expect = 6e-30
Identities = 94/249 (37%), Positives = 123/249 (49%), Gaps = 39/249 (15%)
Frame = -2
Query: 630 KSEDSDEEAREKR----KKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKND--NGGNEA 469
+ E+ DEEA E+R K++DMEAEQ+RLD+EME+RRRRV+EWQE RR++ +GG A
Sbjct: 158 REEEVDEEAAERRRQRKKEEDMEAEQQRLDDEMERRRRRVKEWQEKRREQQQQQDGGGAA 217
Query: 468 -------------KEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMD 328
K GK WTL
Sbjct: 218 GTSAAAAAEADVPKVGKKWTLDGEESDEEGDKEDGNKAEENGGAGDMNVDLPNGGG---- 273
Query: 327 VDKNGTA--DDDEIDPLDAFMNSLVVPEATPQENM------------------TKKDVAK 208
D NG A ++DEIDPLDAFMNS+V+PE E+ + KD
Sbjct: 274 -DANGGAAMEEDEIDPLDAFMNSMVLPEVAKMESAAAAMDTAPAEGVDDKNGKSTKDAVS 332
Query: 207 DDNKNIPKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHS 28
+ +K P+ +GRI QG+DS+ + D EF+KRVKK+K EKL+IVDHS
Sbjct: 333 NGDKKGPRRAMGRIMQGDDSESDYDDADNEGAGEEDEDDEEFIKRVKKTKAEKLAIVDHS 392
Query: 27 KVQYIPFRK 1
K+ Y PFRK
Sbjct: 393 KIDYQPFRK 401
>ref|XP_006349887.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Solanum
tuberosum]
Length = 1115
Score = 136 bits (342), Expect = 2e-29
Identities = 94/252 (37%), Positives = 118/252 (46%), Gaps = 38/252 (15%)
Frame = -2
Query: 642 NSRRKSEDSDEEAREKRKK---DDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKN------ 490
N+R + E +DE + EK +K +D+ EQ++LD+EMEKRRRRVQEWQE++RKK
Sbjct: 183 NNRLREESTDEVSAEKDQKSREEDLAEEQRKLDDEMEKRRRRVQEWQELKRKKEESERET 242
Query: 489 ---DNGGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK 319
D G E K GKTWTL +
Sbjct: 243 LGVDAGAEEPKLGKTWTLDGESDDEDAEGKTGMDIDMDDSGKVMDDEIGADKVVSSSIGS 302
Query: 318 N---------GTADDDEIDPLDAFMNSLVVPEATPQENMTKKDVAKDDNKNIP------- 187
+ G DDDEIDPLDAFMN +V+PE E + K V D +N
Sbjct: 303 DSPVIQNGGDGLVDDDEIDPLDAFMNDMVLPEV---EKLNKSVVNSLDGENSSLKEKNGL 359
Query: 186 ----------KSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIV 37
K +GRI GEDSD + EFMKRVKK+K EKLS+V
Sbjct: 360 RKEEKPKMSMKKTMGRIIPGEDSDSDYGNVENDEDPLEEEDDEEFMKRVKKTKAEKLSLV 419
Query: 36 DHSKVQYIPFRK 1
DHSK++Y PFRK
Sbjct: 420 DHSKIEYPPFRK 431
>ref|XP_004252969.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
[Solanum lycopersicum] gi|460415245|ref|XP_004252970.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like
isoform 2 [Solanum lycopersicum]
Length = 1147
Score = 136 bits (342), Expect = 2e-29
Identities = 94/252 (37%), Positives = 118/252 (46%), Gaps = 38/252 (15%)
Frame = -2
Query: 642 NSRRKSEDSDEEAREKRKK---DDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKN------ 490
N+R + E +DE + EK +K +D+ EQ++LD+EMEKRRRRVQEWQE++RKK
Sbjct: 215 NNRLREESTDEVSAEKDQKSREEDLAEEQRKLDDEMEKRRRRVQEWQELKRKKEESERET 274
Query: 489 ---DNGGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK 319
D G E K GKTWTL +
Sbjct: 275 LGVDAGAEEPKLGKTWTLDGESDDEDAEGKTGMDIDRDDTGKVMDDENGAGKVVSSSIGS 334
Query: 318 N---------GTADDDEIDPLDAFMNSLVVPEATPQENMTKKDVAKDDNKNIP------- 187
+ G DDDEIDPLDAFMN +V+PE E + K V D +N
Sbjct: 335 DSPVIQNGGDGLVDDDEIDPLDAFMNDMVLPEV---EKLNKSVVNSLDGENSSMKEKNGP 391
Query: 186 ----------KSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIV 37
K +GRI GEDSD + EFMKRVKK+K EKLS+V
Sbjct: 392 RKEEKPKMSMKKTMGRIIPGEDSDSDYGNVENDEDPLEEEDDEEFMKRVKKTKAEKLSLV 451
Query: 36 DHSKVQYIPFRK 1
DHSK++Y PFRK
Sbjct: 452 DHSKIEYPPFRK 463
>ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 1173
Score = 135 bits (341), Expect = 2e-29
Identities = 92/248 (37%), Positives = 120/248 (48%), Gaps = 36/248 (14%)
Frame = -2
Query: 636 RRKSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDN--------- 484
++ ED ++ +K +++++E EQKRLDEEMEKRRRRVQEWQE+RRKK ++
Sbjct: 245 KKSGEDELDKKEKKTREEELEDEQKRLDEEMEKRRRRVQEWQELRRKKEESEREKHGEAS 304
Query: 483 GGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK-NGTA 307
+E + GKTWTL M VD NGTA
Sbjct: 305 NADEPQTGKTWTLEGESDDEEAPLAGKSETNMDLDENAKPDEEIGDA---MVVDSYNGTA 361
Query: 306 ----------DDDEIDPLDAFMNSLVVPEATPQENMTKKDVAKDDNKNIPKSK------- 178
+D+EIDPLDAFMNS+V+PE N + ++ + K K
Sbjct: 362 TSENGDNDVIEDEEIDPLDAFMNSMVLPEVEKLNNAVITETVDENKVELKKKKEEGNEGE 421
Query: 177 ---------VGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSK 25
+GRI GEDSD + EFMKRVKK+K EKLS+VDHSK
Sbjct: 422 KLKKGSNKSLGRIIPGEDSDSDYGDLENDEGPLDDEDDDEFMKRVKKTKAEKLSVVDHSK 481
Query: 24 VQYIPFRK 1
+ Y PFRK
Sbjct: 482 IDYKPFRK 489
>gb|ESW29025.1| hypothetical protein PHAVU_002G037900g [Phaseolus vulgaris]
gi|561030447|gb|ESW29026.1| hypothetical protein
PHAVU_002G037900g [Phaseolus vulgaris]
Length = 1129
Score = 135 bits (339), Expect = 4e-29
Identities = 94/254 (37%), Positives = 119/254 (46%), Gaps = 42/254 (16%)
Frame = -2
Query: 636 RRKSEDSDEEAREKR----KKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDN----- 484
R+KS D + ++ ++++ME EQKRLDEE+EKRRRRVQEWQE+RRKK +
Sbjct: 203 RKKSVGDDSDTKDGEIKPTREEEMENEQKRLDEEIEKRRRRVQEWQELRRKKEEAEREKH 262
Query: 483 ---GGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDKN- 316
NE + GKTWTL +D D
Sbjct: 263 GEVSANEPESGKTWTLEGESDDEEGPGTEKQDTGMDVDEDDKPADMEPKDVMEVDTDNGT 322
Query: 315 ----------GTADDDEIDPLDAFMNSLVVPEATPQEN------------MTKKDVAKDD 202
GT +DDEIDPLDAFMNS+V+PE N + KD +
Sbjct: 323 IASDLQEGTAGTPEDDEIDPLDAFMNSMVLPEVEKLNNAVTSVISDKAVDIKAKDKGNEQ 382
Query: 201 NKNIPKSK-----VGRIRQGE--DSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLS 43
++ K +GRI GE DSDY D EFMKRVKK+K EKLS
Sbjct: 383 SRGTQSRKGSNKSIGRIIPGEESDSDYADD---EVERDPLDEDDDEFMKRVKKTKAEKLS 439
Query: 42 IVDHSKVQYIPFRK 1
+VDHSK+ Y PF+K
Sbjct: 440 LVDHSKIDYEPFKK 453
>ref|XP_002445101.1| hypothetical protein SORBIDRAFT_07g004090 [Sorghum bicolor]
gi|241941451|gb|EES14596.1| hypothetical protein
SORBIDRAFT_07g004090 [Sorghum bicolor]
Length = 1062
Score = 135 bits (339), Expect = 4e-29
Identities = 94/253 (37%), Positives = 123/253 (48%), Gaps = 40/253 (15%)
Frame = -2
Query: 639 SRRKSEDSDEEA---REKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKN---DNGG 478
SR + E EEA R+++K++DMEAEQ+RLD+EME+RRRRV+EWQE RR++ D GG
Sbjct: 152 SREEEEVDAEEAERRRQRKKEEDMEAEQQRLDDEMERRRRRVKEWQEKRREQQQQQDGGG 211
Query: 477 NEAKE-------------GKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 337
GK WTL
Sbjct: 212 AGGASAAAAAEADGVKVAGKKWTLDGEESDEEGDKEDGKKDEENGGAGDMDVDLPNG--- 268
Query: 336 PMDVDKNGTA--DDDEIDPLDAFMNSLVVPEATPQENM-------------------TKK 220
D D NG A ++DEIDPLDAFMNS+V+PE E+ + K
Sbjct: 269 --DGDANGGAGMEEDEIDPLDAFMNSMVLPEVAKLESAAAAMDTTAPGAGADDKNGKSSK 326
Query: 219 DVAKDDNKNIPKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSI 40
DV + +K + +GRI QG+DS+ + D EF+KRVKK+K EKL+I
Sbjct: 327 DVVSNGDKKGSRKAIGRIMQGDDSESDYDDADDDGAGEDDEDDEEFIKRVKKTKAEKLAI 386
Query: 39 VDHSKVQYIPFRK 1
VDHSK+ Y PFRK
Sbjct: 387 VDHSKIDYQPFRK 399
>gb|EMT07306.1| DEAD-box ATP-dependent RNA helicase 42 [Aegilops tauschii]
Length = 1058
Score = 134 bits (338), Expect = 5e-29
Identities = 92/246 (37%), Positives = 122/246 (49%), Gaps = 33/246 (13%)
Frame = -2
Query: 639 SRRKSEDSDE-EAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKND-----NGG 478
SR + ED++E E R ++K++DMEAEQ+RLD+EME+RRRRV+EWQE +R++ +GG
Sbjct: 159 SREEEEDAEEVERRRQKKEEDMEAEQQRLDDEMERRRRRVKEWQEKKRREQQQEDGASGG 218
Query: 477 NEA-------KEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK 319
A K GK WTL MD
Sbjct: 219 AAAIEADGGGKSGKKWTLDGEESDEEDVKKLEENAGTGAMDVDLPN---------MDNGS 269
Query: 318 NGTA--DDDEIDPLDAFMNSLVVPEATPQENMTK------------------KDVAKDDN 199
N A ++DEIDPLDAFM+S+V+P E+ T KD +++
Sbjct: 270 NSGAGLEEDEIDPLDAFMDSMVLPVVAKLESATTATESVLADNAGGLNDKGVKDATSNED 329
Query: 198 KNIPKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKVQ 19
K +GRI QG+DSD + D EF+KRVKK+K EKL IVDHSK+
Sbjct: 330 KKRQMMAIGRIMQGDDSDSDYDDANNGEAGSDDEDDAEFIKRVKKTKAEKLVIVDHSKID 389
Query: 18 YIPFRK 1
Y PFRK
Sbjct: 390 YQPFRK 395
>gb|EXB56258.1| DEAD-box ATP-dependent RNA helicase 42 [Morus notabilis]
Length = 1140
Score = 133 bits (335), Expect = 1e-28
Identities = 93/249 (37%), Positives = 122/249 (48%), Gaps = 39/249 (15%)
Frame = -2
Query: 630 KSEDSDEEAREK-RKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDN--------GG 478
KS ++++ +K +++++E EQ +LDEEMEKRRRRVQEWQE+RRKK +
Sbjct: 210 KSRSAEDDLDKKPTREEELEEEQHKLDEEMEKRRRRVQEWQELRRKKEEAETEKQGEANA 269
Query: 477 NEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK------- 319
E K GKTWTL M +D
Sbjct: 270 EEPKSGKTWTLEGESDDEEVPSTGKVETAMEIDGEANPNKGVTDE---MAIDSENGSAPS 326
Query: 318 ------NGTADDDEIDPLDAFMNSLVVPEATPQENMTK------------KDVAKDDNKN 193
+GT+ D+EIDPLDAFMNS+V+PE N ++ KD D +K+
Sbjct: 327 ALQNGVDGTSGDEEIDPLDAFMNSMVLPEVEKLNNASEPASIDGKSLDLNKDKKDDQSKD 386
Query: 192 IPKSK-----VGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHS 28
P K +GRI GEDS+ + + EFMKRVKK+K EKLSIVDHS
Sbjct: 387 EPWRKGPNKSMGRIIPGEDSESDYEDVENDGDPLEDEDDDEFMKRVKKTKAEKLSIVDHS 446
Query: 27 KVQYIPFRK 1
K+ YIPFRK
Sbjct: 447 KIDYIPFRK 455
>gb|EMS64519.1| DEAD-box ATP-dependent RNA helicase 42 [Triticum urartu]
Length = 1063
Score = 133 bits (335), Expect = 1e-28
Identities = 91/246 (36%), Positives = 122/246 (49%), Gaps = 33/246 (13%)
Frame = -2
Query: 639 SRRKSEDSDE-EAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKND-----NGG 478
+R + ED++E E R ++K++DMEAEQ+RLD+EME+RRRRV+EWQE +R++ +GG
Sbjct: 164 TREEEEDAEEVERRRQKKEEDMEAEQQRLDDEMERRRRRVKEWQEKKRREQQQEDGASGG 223
Query: 477 NEA-------KEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK 319
A K GK WTL MD
Sbjct: 224 AAAIEADGGGKSGKKWTLDGEESDEEDVKKLEENAGTGAMDVDLPN---------MDNGS 274
Query: 318 NGTA--DDDEIDPLDAFMNSLVVPEATPQENMTK------------------KDVAKDDN 199
N A ++DEIDPLDAFM+S+V+P E+ T KD +++
Sbjct: 275 NSGAGLEEDEIDPLDAFMDSMVLPVVAKLESATTATESVLADNAGGLNDKSVKDATSNED 334
Query: 198 KNIPKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKVQ 19
K +GRI QG+DSD + D EF+KRVKK+K EKL IVDHSK+
Sbjct: 335 KKRQMMAIGRIMQGDDSDSDYDDANNGEAGSDDEDDAEFIKRVKKTKAEKLVIVDHSKID 394
Query: 18 YIPFRK 1
Y PFRK
Sbjct: 395 YQPFRK 400
>ref|NP_187573.1| DEAD-box ATP-dependent RNA helicase 45 [Arabidopsis thaliana]
gi|75337164|sp|Q9SF41.1|RH45_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 45
gi|6682258|gb|AAF23310.1|AC016661_35 putative RNA
helicase [Arabidopsis thaliana]
gi|332641267|gb|AEE74788.1| DEAD-box ATP-dependent RNA
helicase 45 [Arabidopsis thaliana]
Length = 989
Score = 133 bits (335), Expect = 1e-28
Identities = 87/227 (38%), Positives = 115/227 (50%), Gaps = 17/227 (7%)
Frame = -2
Query: 630 KSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDNGGNEAK---EG 460
+S D++ +K + + +E EQK+L EE+EKRRRRVQEWQE++R+ N+ E+K G
Sbjct: 133 RSRHGDDDVEKKTRDEQVEDEQKQLAEEVEKRRRRVQEWQELKRQ-NEEAQIESKGPETG 191
Query: 459 KTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP-MDVDKNG---TADDDEI 292
K WTL + V +NG AD+DEI
Sbjct: 192 KAWTLDGESDDEVKSDSEMDVDRDTKLENGGDAKMVASENETAVTVSENGGDRAADEDEI 251
Query: 291 DPLDAFMNSLVVPEATPQEN----------MTKKDVAKDDNKNIPKSKVGRIRQGEDSDY 142
DPLDAFMN++V+PE N M K+ K K+ +GRI QGEDSD
Sbjct: 252 DPLDAFMNTMVLPEVEKLSNIVIDGILDFKMNGKETGDQAKKGFNKAALGRIIQGEDSDS 311
Query: 141 ESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKVQYIPFRK 1
+ EFMKRVKK+K EKLS+VDHSK++Y PFRK
Sbjct: 312 DYSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRK 358
>dbj|BAF01843.1| putative RNA helicase [Arabidopsis thaliana]
Length = 632
Score = 133 bits (335), Expect = 1e-28
Identities = 87/227 (38%), Positives = 115/227 (50%), Gaps = 17/227 (7%)
Frame = -2
Query: 630 KSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDNGGNEAK---EG 460
+S D++ +K + + +E EQK+L EE+EKRRRRVQEWQE++R+ N+ E+K G
Sbjct: 99 RSRHGDDDVEKKTRDEQVEDEQKQLAEEVEKRRRRVQEWQELKRQ-NEEAQIESKGPETG 157
Query: 459 KTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP-MDVDKNG---TADDDEI 292
K WTL + V +NG AD+DEI
Sbjct: 158 KAWTLDGESDDEVKSDSEMDVDRDTKLENGGDAKMVASENETAVTVSENGGDRAADEDEI 217
Query: 291 DPLDAFMNSLVVPEATPQEN----------MTKKDVAKDDNKNIPKSKVGRIRQGEDSDY 142
DPLDAFMN++V+PE N M K+ K K+ +GRI QGEDSD
Sbjct: 218 DPLDAFMNTMVLPEVEKLSNIVIDGILDFKMNGKETGDQAKKGFNKAALGRIIQGEDSDS 277
Query: 141 ESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKVQYIPFRK 1
+ EFMKRVKK+K EKLS+VDHSK++Y PFRK
Sbjct: 278 DYSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRK 324
>ref|XP_004485495.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform X1
[Cicer arietinum]
Length = 1140
Score = 133 bits (334), Expect = 2e-28
Identities = 100/254 (39%), Positives = 118/254 (46%), Gaps = 42/254 (16%)
Frame = -2
Query: 636 RRKSEDSDEEAREKRKK----DDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKND-----N 484
RRKS+ D + ++K K ++ME EQ+RLDEEMEKRRRRVQEWQE+RRKK +
Sbjct: 214 RRKSDIDDSDNKDKEDKPSREEEMEDEQRRLDEEMEKRRRRVQEWQELRRKKEEAEREKQ 273
Query: 483 GGNEAKE----GKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDKN 316
G A E GK WTL MDVD
Sbjct: 274 GEASATEPESGGKAWTLDGEESDDEEGTGKHTTMDVDEDDKLADKEPGDSMA--MDVDNG 331
Query: 315 -----------GTADDDEIDPLDAFMNSLVVPEATPQENM---TKKDVAKD--------- 205
G +DDEIDPLDAFMNS+V+PE N T D A D
Sbjct: 332 TVASDLQNGDAGAMEDDEIDPLDAFMNSMVLPEVEKLNNAVSSTPLDKASDLKPKDKGDE 391
Query: 204 ------DNKNIPKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLS 43
+K +GRI GE+SD + EFMKRVKK+K EKLS
Sbjct: 392 RSNGGGQSKKGSNKSIGRIIPGEESDSDY-ADPEVEGDPLDEDDDEFMKRVKKTKAEKLS 450
Query: 42 IVDHSKVQYIPFRK 1
IVDHSK+ YIPFRK
Sbjct: 451 IVDHSKIDYIPFRK 464