BLASTX nr result
ID: Ephedra28_contig00015804
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00015804
(489 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006307233.1| hypothetical protein CARUB_v10008838mg [Caps... 58 1e-06
gb|AAF78422.1|AC018748_1 Contains similarity to RNA-binding prot... 58 1e-06
ref|NP_564639.1| hydroxyproline-rich glycoprotein family protein... 58 1e-06
gb|AAM65660.1| Contains similarity to RNA-binding protein from A... 58 1e-06
ref|XP_002894457.1| predicted protein [Arabidopsis lyrata subsp.... 58 1e-06
ref|XP_002274822.2| PREDICTED: uncharacterized protein LOC100253... 57 3e-06
emb|CBI17195.3| unnamed protein product [Vitis vinifera] 57 3e-06
ref|XP_006392772.1| hypothetical protein EUTSA_v10011382mg [Eutr... 56 6e-06
gb|EXB62642.1| hypothetical protein L484_023937 [Morus notabilis] 55 7e-06
ref|XP_006392774.1| hypothetical protein EUTSA_v10012156mg [Eutr... 55 7e-06
ref|XP_003629502.1| hypothetical protein MTR_8g078230 [Medicago ... 55 7e-06
>ref|XP_006307233.1| hypothetical protein CARUB_v10008838mg [Capsella rubella]
gi|482575944|gb|EOA40131.1| hypothetical protein
CARUB_v10008838mg [Capsella rubella]
Length = 525
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/76 (36%), Positives = 42/76 (55%)
Frame = -3
Query: 484 LRILVKKYAGKPKYTAFKENRMLDNAAHRLSPEAPDYAKEFMERCLITLKKNPGWQVKEK 305
++ +V Y+G + TA K+N LD A L APD K F +R +TLK NPGW +K
Sbjct: 450 MKEIVDHYSGPDRVTAKKQNEELDRIATTLPKSAPDSVKRFADRAALTLKSNPGWGFDKK 509
Query: 304 ERLLNKLATTLNNHSK 257
+ ++KL ++ K
Sbjct: 510 YQFMDKLVLEVSQSYK 525
>gb|AAF78422.1|AC018748_1 Contains similarity to RNA-binding protein from Arabidopsis
thaliana gi|2129727 and contains RNA recognition
PF|00076 domain. ESTs gb|H37317, gb|F14415, gb|AA651290
come from this gene [Arabidopsis thaliana]
Length = 829
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/76 (36%), Positives = 42/76 (55%)
Frame = -3
Query: 484 LRILVKKYAGKPKYTAFKENRMLDNAAHRLSPEAPDYAKEFMERCLITLKKNPGWQVKEK 305
++ +V Y+G + TA K+N LD A L APD K F +R +TLK NPGW +K
Sbjct: 754 MKEIVDHYSGPDRVTAKKQNEELDRIATTLPASAPDSVKRFADRAALTLKSNPGWGFDKK 813
Query: 304 ERLLNKLATTLNNHSK 257
+ ++KL ++ K
Sbjct: 814 YQFMDKLVLEVSQSYK 829
>ref|NP_564639.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
thaliana] gi|12324041|gb|AAG51990.1|AC024260_28 unknown
protein; 43598-45751 [Arabidopsis thaliana]
gi|16323139|gb|AAL15304.1| At1g53640/F22G10.8
[Arabidopsis thaliana] gi|23506017|gb|AAN28868.1|
At1g53640/F22G10.8 [Arabidopsis thaliana]
gi|110740318|dbj|BAF02054.1| hypothetical protein
[Arabidopsis thaliana] gi|332194854|gb|AEE32975.1|
hydroxyproline-rich glycoprotein family protein
[Arabidopsis thaliana]
Length = 523
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/76 (36%), Positives = 42/76 (55%)
Frame = -3
Query: 484 LRILVKKYAGKPKYTAFKENRMLDNAAHRLSPEAPDYAKEFMERCLITLKKNPGWQVKEK 305
++ +V Y+G + TA K+N LD A L APD K F +R +TLK NPGW +K
Sbjct: 448 MKEIVDHYSGPDRVTAKKQNEELDRIATTLPASAPDSVKRFADRAALTLKSNPGWGFDKK 507
Query: 304 ERLLNKLATTLNNHSK 257
+ ++KL ++ K
Sbjct: 508 YQFMDKLVLEVSQSYK 523
>gb|AAM65660.1| Contains similarity to RNA-binding protein from Arabidopsis
thaliana gi|2129727 and contains RNA recognition
PF|00076 domain [Arabidopsis thaliana]
Length = 523
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/76 (36%), Positives = 42/76 (55%)
Frame = -3
Query: 484 LRILVKKYAGKPKYTAFKENRMLDNAAHRLSPEAPDYAKEFMERCLITLKKNPGWQVKEK 305
++ +V Y+G + TA K+N LD A L APD K F +R +TLK NPGW +K
Sbjct: 448 MKEIVDHYSGPDRVTAKKQNEELDRIATTLPASAPDSVKRFADRAALTLKSNPGWGFDKK 507
Query: 304 ERLLNKLATTLNNHSK 257
+ ++KL ++ K
Sbjct: 508 YQFMDKLVLEVSQSYK 523
>ref|XP_002894457.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340299|gb|EFH70716.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 769
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = -3
Query: 484 LRILVKKYAGKPKYTAFKENRMLDNAAHRLSPEAPDYAKEFMERCLITLKKNPGWQVKEK 305
++ +V Y+G + TA K+N LD+ A + APD K F +R +TLK NPGW +K
Sbjct: 694 MKEIVDHYSGPDRVTAKKQNEELDSIATTIPASAPDSVKRFADRAALTLKSNPGWGFDKK 753
Query: 304 ERLLNKLATTLNNHSK 257
+ ++KL ++ K
Sbjct: 754 YQFMDKLVLEVSQSYK 769
>ref|XP_002274822.2| PREDICTED: uncharacterized protein LOC100253300 [Vitis vinifera]
Length = 482
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/77 (35%), Positives = 44/77 (57%)
Frame = -3
Query: 487 YLRILVKKYAGKPKYTAFKENRMLDNAAHRLSPEAPDYAKEFMERCLITLKKNPGWQVKE 308
YL+ LV Y+G + TA K+ L+ A L AP+ K F +R +++L+ NPGW +
Sbjct: 406 YLKELVDYYSGPDRVTAKKQQEELERVAKTLPETAPNSVKRFTDRAILSLQSNPGWGFDK 465
Query: 307 KERLLNKLATTLNNHSK 257
K + ++KL ++ H K
Sbjct: 466 KCQFMDKLVWEVSQHYK 482
>emb|CBI17195.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/77 (35%), Positives = 44/77 (57%)
Frame = -3
Query: 487 YLRILVKKYAGKPKYTAFKENRMLDNAAHRLSPEAPDYAKEFMERCLITLKKNPGWQVKE 308
YL+ LV Y+G + TA K+ L+ A L AP+ K F +R +++L+ NPGW +
Sbjct: 133 YLKELVDYYSGPDRVTAKKQQEELERVAKTLPETAPNSVKRFTDRAILSLQSNPGWGFDK 192
Query: 307 KERLLNKLATTLNNHSK 257
K + ++KL ++ H K
Sbjct: 193 KCQFMDKLVWEVSQHYK 209
>ref|XP_006392772.1| hypothetical protein EUTSA_v10011382mg [Eutrema salsugineum]
gi|557089350|gb|ESQ30058.1| hypothetical protein
EUTSA_v10011382mg [Eutrema salsugineum]
Length = 531
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = -3
Query: 484 LRILVKKYAGKPKYTAFKENRMLDNAAHRLSPEAPDYAKEFMERCLITLKKNPGWQVKEK 305
++ +V Y+G + TA K+N LD A + APD K F +R ++LK NPGW +K
Sbjct: 456 IKEIVDHYSGPDRVTAKKQNEELDRIATTVPKSAPDSVKRFADRAALSLKSNPGWGFDKK 515
Query: 304 ERLLNKLATTLNNHSK 257
+ ++KL ++ K
Sbjct: 516 YQFMDKLVAEVSQSYK 531
>gb|EXB62642.1| hypothetical protein L484_023937 [Morus notabilis]
Length = 442
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/76 (32%), Positives = 43/76 (56%)
Frame = -3
Query: 484 LRILVKKYAGKPKYTAFKENRMLDNAAHRLSPEAPDYAKEFMERCLITLKKNPGWQVKEK 305
L+ +V Y+G + T K+++ LD L AP+ K+F ER +++L+ NPGW K
Sbjct: 367 LKEIVDHYSGPNRVTVKKQHQELDRVTKTLPASAPNSVKQFTERAVLSLQNNPGWGFHRK 426
Query: 304 ERLLNKLATTLNNHSK 257
+ ++KL ++ H K
Sbjct: 427 CQFMDKLVARMSQHYK 442
>ref|XP_006392774.1| hypothetical protein EUTSA_v10012156mg [Eutrema salsugineum]
gi|557089352|gb|ESQ30060.1| hypothetical protein
EUTSA_v10012156mg [Eutrema salsugineum]
Length = 106
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = -3
Query: 484 LRILVKKYAGKPKYTAFKENRMLDNAAHRLSPEAPDYAKEFMERCLITLKKNPGWQVKEK 305
++ +V Y+G + TA K+N LD A + APD K F +R ++LK NPGW +K
Sbjct: 31 IKEIVDHYSGPDRVTAKKQNEELDRIATTVPKSAPDSVKRFADRAALSLKSNPGWGFDKK 90
Query: 304 ERLLNKLATTLNNHSK 257
+ + KL ++ K
Sbjct: 91 YQFMEKLVAEVSQSYK 106
>ref|XP_003629502.1| hypothetical protein MTR_8g078230 [Medicago truncatula]
gi|355523524|gb|AET03978.1| hypothetical protein
MTR_8g078230 [Medicago truncatula]
Length = 502
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = -3
Query: 484 LRILVKKYAGKPKYTAFKENRMLDNAAHRLSPEAPDYAKEFMERCLITLKKNPGWQVKEK 305
L+ +V Y+G + TA K+ L+ A L AP KEF R +++L+ NPGW +K
Sbjct: 427 LKKIVDHYSGPDRVTAKKQQEELERVAKTLPTSAPSSVKEFTNRAVVSLQSNPGWGFDKK 486
Query: 304 ERLLNKLATTLNNHSK 257
+ ++KL ++ H K
Sbjct: 487 CQFMDKLVFEVSQHHK 502