BLASTX nr result

ID: Ephedra28_contig00015797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00015797
         (573 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40971.1| unknown [Picea sitchensis]                              72   1e-10
ref|XP_006852323.1| hypothetical protein AMTR_s00049p00203600 [A...    58   1e-06

>gb|ACN40971.1| unknown [Picea sitchensis]
          Length = 924

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 36/83 (43%), Positives = 55/83 (66%)
 Frame = -2

Query: 251 KGAVVNAKVVVMFRRSVYESPVNKIQLLWEALLDVLGFHVSLQFVSKEIDPGTKSGKVSN 72
           KGA++N K V +FR+ + E   +KI+  W +LLDV+G +V L+ VS +IDP T  GK S 
Sbjct: 84  KGAMINVKAVAIFRKRLKEDMKDKIENQWVSLLDVIGQNVLLELVSVDIDPETSCGKRSK 143

Query: 71  ECILKGWMQESIVDDGDDFIKCT 3
           E  LKGW+ ++  +  D+ ++CT
Sbjct: 144 ESALKGWLLQAARE--DNMMECT 164


>ref|XP_006852323.1| hypothetical protein AMTR_s00049p00203600 [Amborella trichopoda]
           gi|548855927|gb|ERN13790.1| hypothetical protein
           AMTR_s00049p00203600 [Amborella trichopoda]
          Length = 912

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/86 (36%), Positives = 48/86 (55%)
 Frame = -2

Query: 305 IDQEVPVEKKATIYEDPRKGAVVNAKVVVMFRRSVYESPVNKIQLLWEALLDVLGFHVSL 126
           I Q+ P E   ++   P +   ++ K V+  R+ + E    KI+  +E+ L+ +G  + L
Sbjct: 56  ISQDKPSEPVTSL---PNQATGIDVKAVITIRKKIKEKLTEKIEDQFESFLNGIGRGIVL 112

Query: 125 QFVSKEIDPGTKSGKVSNECILKGWM 48
           Q VS EIDP TKSGK S E   +GW+
Sbjct: 113 QLVSNEIDPTTKSGKRSRESAARGWL 138


Top