BLASTX nr result
ID: Ephedra28_contig00015635
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00015635
(439 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK26221.1| unknown [Picea sitchensis] 113 2e-23
ref|XP_003540046.1| PREDICTED: glycine-rich RNA-binding protein ... 107 1e-21
gb|ESW05028.1| hypothetical protein PHAVU_011G145700g [Phaseolus... 106 3e-21
gb|EOY12680.1| RNA-binding family protein [Theobroma cacao] 105 5e-21
gb|AFK44512.1| unknown [Medicago truncatula] 105 6e-21
ref|XP_006659102.1| PREDICTED: glycine-rich RNA-binding protein ... 104 1e-20
ref|XP_004972888.1| PREDICTED: nucleolin-like [Setaria italica] 104 1e-20
gb|EPS66753.1| hypothetical protein M569_08025, partial [Genlise... 103 2e-20
ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium dist... 103 2e-20
ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [S... 102 5e-20
ref|NP_001150207.1| LOC100283837 [Zea mays] gi|195621336|gb|ACG3... 102 5e-20
ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein ... 102 7e-20
ref|XP_004505422.1| PREDICTED: nucleolysin TIA-1 isoform p40-lik... 101 1e-19
ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sa... 101 1e-19
ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein ... 101 1e-19
gb|ACN41115.1| unknown [Picea sitchensis] 100 2e-19
ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group] g... 100 2e-19
ref|XP_006360109.1| PREDICTED: glycine-rich RNA-binding protein ... 100 2e-19
ref|XP_004244174.1| PREDICTED: nucleolin-like isoform 1 [Solanum... 100 2e-19
ref|XP_002531336.1| RNA binding protein, putative [Ricinus commu... 100 2e-19
>gb|ABK26221.1| unknown [Picea sitchensis]
Length = 151
Score = 113 bits (283), Expect = 2e-23
Identities = 52/90 (57%), Positives = 69/90 (76%)
Frame = +1
Query: 49 PEHRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGATKYYGFVTYATQE 228
P PKL+++GLS++TT+E LR AF KFG V++AR+V DK G +K + FV YATQE
Sbjct: 42 PADPSPKLFVSGLSKRTTDEGLREAFSKFGRVLEARVVTDK--MNGVSKGFAFVRYATQE 99
Query: 229 EADKGRKGMDSKYLDGWVIFPEYVKP*PPK 318
EADKG++GMD K+LDGWVIF +Y +P PP+
Sbjct: 100 EADKGKEGMDGKFLDGWVIFADYARPRPPR 129
>ref|XP_003540046.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Glycine max]
Length = 145
Score = 107 bits (268), Expect = 1e-21
Identities = 56/104 (53%), Positives = 70/104 (67%)
Frame = +1
Query: 4 TSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKT 183
T P P PT+P + P L+++GLS++TT E LR F KFG VV AR+V D R +
Sbjct: 31 TPPPGATPTPTRPTAEPN--PNLFVSGLSKRTTTERLREEFAKFGEVVHARVVTD--RVS 86
Query: 184 GATKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
G +K +GFV YAT EEA KG +GMD K+LDGWVIF EY +P PP
Sbjct: 87 GYSKGFGFVQYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPP 130
>gb|ESW05028.1| hypothetical protein PHAVU_011G145700g [Phaseolus vulgaris]
Length = 144
Score = 106 bits (265), Expect = 3e-21
Identities = 55/104 (52%), Positives = 69/104 (66%)
Frame = +1
Query: 4 TSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKT 183
T PL P P +P + L+++GLS++TT E LR F KFG VV AR+V D R +
Sbjct: 31 TPPLGAVPSPARPTAEPNN--NLFVSGLSKRTTTEKLREEFSKFGEVVHARVVTD--RVS 86
Query: 184 GATKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
G +K +GFV YAT EEA KG +GMD K+LDGWVIF EY +P PP
Sbjct: 87 GYSKGFGFVQYATLEEAAKGIEGMDGKFLDGWVIFAEYARPRPP 130
>gb|EOY12680.1| RNA-binding family protein [Theobroma cacao]
Length = 156
Score = 105 bits (263), Expect = 5e-21
Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 9/114 (7%)
Frame = +1
Query: 4 TSPLANAPPPTQPLLPEHRCP---------KLYINGLSRKTTEETLRAAFEKFGTVVDAR 156
TSP + PPP + P L+++GL+++TT E LR AF +FG VVDAR
Sbjct: 27 TSPNSFMPPPITAMGNGEGTPGREQAPPSTNLFVSGLNKRTTMEKLREAFSQFGQVVDAR 86
Query: 157 IVADKNRKTGATKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PPK 318
+V D R +G +K +GFV YAT EEA+KGR+GMD K+LDGWVIF EY +P P +
Sbjct: 87 VVTD--RVSGYSKGFGFVRYATLEEAEKGREGMDGKFLDGWVIFAEYARPRPER 138
>gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 105 bits (262), Expect = 6e-21
Identities = 56/112 (50%), Positives = 77/112 (68%), Gaps = 8/112 (7%)
Frame = +1
Query: 4 TSPLANAP--------PPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARI 159
T+P+A++P PP+ + E L+++GLS++TT ETLR AF+KFG VV AR+
Sbjct: 24 TNPIASSPAFPSFSSSPPSARQMAEPST-NLFVSGLSKRTTTETLREAFQKFGEVVHARV 82
Query: 160 VADKNRKTGATKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
V D R +G +K +GFV YAT E+A KG +GMD K+L+GWVIF EY +P PP
Sbjct: 83 VTD--RVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLEGWVIFAEYARPRPP 132
>ref|XP_006659102.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Oryza brachyantha]
Length = 141
Score = 104 bits (259), Expect = 1e-20
Identities = 53/97 (54%), Positives = 69/97 (71%)
Frame = +1
Query: 28 PPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGATKYYGF 207
PPT P + P L+++GLS++TT + LR AF KFG V+ AR+V D R TG +K +GF
Sbjct: 25 PPTPPPKADPS-PNLFVSGLSKRTTTDGLREAFAKFGEVLHARVVTD--RVTGFSKGFGF 81
Query: 208 VTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PPK 318
V YAT E+A KG +GMD K+LDGWVIF EY +P PP+
Sbjct: 82 VRYATVEDAAKGIEGMDGKFLDGWVIFAEYARPRPPQ 118
>ref|XP_004972888.1| PREDICTED: nucleolin-like [Setaria italica]
Length = 140
Score = 104 bits (259), Expect = 1e-20
Identities = 56/101 (55%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Frame = +1
Query: 16 ANAPP-PTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGAT 192
A APP P P P L+++GLS++TT E LR AF FG VV AR+V D R +G +
Sbjct: 18 AFAPPKPPVPRPQADPSPNLFVSGLSKRTTTEGLREAFAAFGEVVHARVVTD--RVSGFS 75
Query: 193 KYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
K +GFV YAT E+A KG +GMD K+LDGWVIF EY KP PP
Sbjct: 76 KGFGFVRYATVEDATKGIEGMDGKFLDGWVIFAEYAKPRPP 116
>gb|EPS66753.1| hypothetical protein M569_08025, partial [Genlisea aurea]
Length = 151
Score = 103 bits (258), Expect = 2e-20
Identities = 52/97 (53%), Positives = 68/97 (70%)
Frame = +1
Query: 25 PPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGATKYYG 204
PPP +P L+++GLS++TT E LR AF KFG VV+AR+V D R +G +K +G
Sbjct: 46 PPPAEP------STNLFVSGLSKRTTTEGLRDAFAKFGEVVNARVVTD--RVSGHSKGFG 97
Query: 205 FVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
FV YAT E+A+ G KGMD ++LDGWVIF EY +P PP
Sbjct: 98 FVKYATLEDAESGIKGMDGQFLDGWVIFAEYARPRPP 134
>ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 103 bits (257), Expect = 2e-20
Identities = 52/98 (53%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Frame = +1
Query: 28 PPTQPLLPEHR--CPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGATKYY 201
PP+ P P P L+++GLS++TT + LR AF KFG V+ AR+V D R TG +K +
Sbjct: 34 PPSPPTPPPKADPSPNLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTD--RVTGFSKGF 91
Query: 202 GFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
GFV YA+ E+A KG +GMD K+LDGWVIF EY +P PP
Sbjct: 92 GFVRYASVEDASKGIEGMDGKFLDGWVIFAEYARPRPP 129
>ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein
SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 102 bits (254), Expect = 5e-20
Identities = 55/101 (54%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Frame = +1
Query: 16 ANAPPPTQPLLPE-HRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGAT 192
A APP P+ P L+++GLS++TT E LR AF KFG VV AR+V D R +G +
Sbjct: 18 AFAPPKAPAPRPQADPSPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTD--RVSGFS 75
Query: 193 KYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
K +GFV YAT EEA KG +GMD K+LDGWVIF EY +P P
Sbjct: 76 KGFGFVRYATTEEATKGIEGMDGKFLDGWVIFAEYARPRAP 116
>ref|NP_001150207.1| LOC100283837 [Zea mays] gi|195621336|gb|ACG32498.1| nucleolin [Zea
mays] gi|195637560|gb|ACG38248.1| nucleolin [Zea mays]
gi|223948323|gb|ACN28245.1| unknown [Zea mays]
gi|413917478|gb|AFW57410.1| nucleolin [Zea mays]
Length = 140
Score = 102 bits (254), Expect = 5e-20
Identities = 54/101 (53%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Frame = +1
Query: 16 ANAPPPTQPLLPE-HRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGAT 192
A APP P+ P L+++GLS++TT E LR AF +FG V+ AR+V D R +G +
Sbjct: 18 AFAPPKAPAARPKADPSPNLFVSGLSKRTTSEGLREAFAEFGEVLHARVVTD--RVSGFS 75
Query: 193 KYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
K +GFV YAT EEA KG +G D K+LDGWVIF EY KP PP
Sbjct: 76 KGFGFVRYATTEEAAKGIEGKDGKFLDGWVIFAEYAKPRPP 116
>ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|147854770|emb|CAN78606.1| hypothetical protein
VITISV_024164 [Vitis vinifera]
gi|302143178|emb|CBI20473.3| unnamed protein product
[Vitis vinifera]
Length = 135
Score = 102 bits (253), Expect = 7e-20
Identities = 52/102 (50%), Positives = 68/102 (66%)
Frame = +1
Query: 10 PLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGA 189
P+ A P T P P L+++GLS++TT E L AF KFG VV+AR+V D R +G
Sbjct: 26 PITAATPATPPAEPS---TNLFVSGLSKRTTSEGLHEAFSKFGQVVNARVVTD--RVSGY 80
Query: 190 TKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
+K +GFV Y + E+A +G KGMD K+LDGWVIF EY +P PP
Sbjct: 81 SKGFGFVRYVSLEDAAEGIKGMDGKFLDGWVIFAEYARPRPP 122
>ref|XP_004505422.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cicer arietinum]
Length = 142
Score = 101 bits (251), Expect = 1e-19
Identities = 52/108 (48%), Positives = 72/108 (66%), Gaps = 4/108 (3%)
Frame = +1
Query: 4 TSPLANAPPPTQPLLPEHRCPK----LYINGLSRKTTEETLRAAFEKFGTVVDARIVADK 171
T+P +++P P + + L+++GLS++TT E LR F+KFG VV AR+V D
Sbjct: 22 TNPTSSSPXXXSGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTD- 80
Query: 172 NRKTGATKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
R +G +K +GFV YAT E+A KG +GMD K+LDGWVIF EY +P PP
Sbjct: 81 -RVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPP 127
>ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin
TIAR-like [Cucumis sativus]
Length = 174
Score = 101 bits (251), Expect = 1e-19
Identities = 52/101 (51%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Frame = +1
Query: 25 PPPTQPLLPEHRCPK----LYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGAT 192
PPP P + + L+++GLS++TT E L AF KFG V AR+V D R TG +
Sbjct: 62 PPPLPPSAQQREVAEPSTNLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTD--RVTGYS 119
Query: 193 KYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
K +GFV YAT E+A KG +GMD K+LDGWVIF EY +P PP
Sbjct: 120 KGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPP 160
>ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Glycine max]
Length = 145
Score = 101 bits (251), Expect = 1e-19
Identities = 53/104 (50%), Positives = 68/104 (65%)
Frame = +1
Query: 4 TSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKT 183
T P P PT+P + L+++GLS++T E LR F KFG VV AR+V D R +
Sbjct: 31 TLPPGATPAPTRPTAEPNT--NLFVSGLSKRTNTERLREEFAKFGEVVHARVVTD--RVS 86
Query: 184 GATKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
G +K +GFV YAT E+A KG +GMD K+LDGWVIF EY +P PP
Sbjct: 87 GYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPP 130
>gb|ACN41115.1| unknown [Picea sitchensis]
Length = 149
Score = 100 bits (250), Expect = 2e-19
Identities = 48/84 (57%), Positives = 66/84 (78%)
Frame = +1
Query: 67 KLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGATKYYGFVTYATQEEADKGR 246
KL+I+GLSR+TT+E LRA F +FG +V+AR+V D R +G ++ +GFV YAT E+A KG+
Sbjct: 45 KLFISGLSRQTTDEGLRAKFSEFGQLVEARVVTD--RISGRSRGFGFVRYATLEDAAKGK 102
Query: 247 KGMDSKYLDGWVIFPEYVKP*PPK 318
+GMD K+LDGWVIF ++ KP PK
Sbjct: 103 EGMDGKFLDGWVIFADFAKPREPK 126
>ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition
motif (RRM)-containing protein [Oryza sativa Japonica
Group] gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza
sativa Japonica Group] gi|215767574|dbj|BAG99802.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein
OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 100 bits (250), Expect = 2e-19
Identities = 52/96 (54%), Positives = 67/96 (69%)
Frame = +1
Query: 28 PPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGATKYYGF 207
PPT P + P L+I+GLS++TT + L+ AF KFG V+ AR+V D R TG +K +GF
Sbjct: 25 PPTPPPKADPS-PNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTD--RVTGFSKGFGF 81
Query: 208 VTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
V YAT E+A KG +GMD K+LDGWVIF EY +P P
Sbjct: 82 VRYATVEDAAKGIEGMDGKFLDGWVIFAEYARPRTP 117
>ref|XP_006360109.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Solanum tuberosum]
Length = 157
Score = 100 bits (249), Expect = 2e-19
Identities = 51/97 (52%), Positives = 66/97 (68%)
Frame = +1
Query: 25 PPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGATKYYG 204
PPP +P L+++GLS++TT E LR AF K G VV AR+V D R +G +K +G
Sbjct: 45 PPPAEP------STNLFVSGLSKRTTSEGLREAFVKHGEVVHARVVTD--RVSGYSKGFG 96
Query: 205 FVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
FV YAT E+A+ G KGMD ++LDGWVIF EY +P PP
Sbjct: 97 FVRYATLEDAEAGIKGMDGQFLDGWVIFAEYARPRPP 133
>ref|XP_004244174.1| PREDICTED: nucleolin-like isoform 1 [Solanum lycopersicum]
Length = 151
Score = 100 bits (249), Expect = 2e-19
Identities = 51/97 (52%), Positives = 66/97 (68%)
Frame = +1
Query: 25 PPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGATKYYG 204
PPP +P L+++GLS++TT E LR AF K G VV AR+V D R +G +K +G
Sbjct: 39 PPPAEP------STNLFVSGLSKRTTSEGLREAFVKHGEVVHARVVTD--RVSGYSKGFG 90
Query: 205 FVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 315
FV YAT E+A+ G KGMD ++LDGWVIF EY +P PP
Sbjct: 91 FVRYATLEDAEAGIKGMDGQFLDGWVIFAEYARPRPP 127
>ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
gi|223529058|gb|EEF31043.1| RNA binding protein,
putative [Ricinus communis]
Length = 144
Score = 100 bits (249), Expect = 2e-19
Identities = 45/82 (54%), Positives = 65/82 (79%)
Frame = +1
Query: 61 CPKLYINGLSRKTTEETLRAAFEKFGTVVDARIVADKNRKTGATKYYGFVTYATQEEADK 240
CP+L+++GLSR TT+E L+ AF FG +VDA+++ D R +G +K +GF+TYAT EEA+K
Sbjct: 35 CPRLFVSGLSRLTTDEKLKEAFSPFGQLVDAKVIID--RASGRSKGFGFITYATIEEAEK 92
Query: 241 GRKGMDSKYLDGWVIFPEYVKP 306
R+GM++K+LDGWVIF + KP
Sbjct: 93 AREGMNAKFLDGWVIFVDPAKP 114