BLASTX nr result

ID: Ephedra28_contig00015629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00015629
         (476 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001769488.1| predicted protein [Physcomitrella patens] gi...    98   1e-18
ref|XP_001761179.1| predicted protein [Physcomitrella patens] gi...    85   1e-14
ref|XP_001761172.1| predicted protein [Physcomitrella patens] gi...    85   1e-14
ref|XP_002972835.1| hypothetical protein SELMODRAFT_23945 [Selag...    79   5e-13
ref|XP_002984407.1| hypothetical protein SELMODRAFT_24030 [Selag...    79   5e-13
ref|XP_001754325.1| predicted protein [Physcomitrella patens] gi...    74   3e-11
ref|XP_001761253.1| predicted protein [Physcomitrella patens] gi...    70   4e-10
ref|XP_001771909.1| predicted protein [Physcomitrella patens] gi...    67   2e-09
ref|XP_001769183.1| predicted protein [Physcomitrella patens] gi...    63   5e-08
ref|XP_001764615.1| predicted protein [Physcomitrella patens] gi...    62   8e-08
ref|XP_001764506.1| predicted protein [Physcomitrella patens] gi...    60   4e-07
ref|XP_005058204.1| PREDICTED: exostosin-1c-like isoform X1 [Fic...    58   2e-06
ref|XP_005803497.1| PREDICTED: exostosin-1-like [Xiphophorus mac...    56   6e-06
sp|Q5IGR6.1|EXT1C_DANRE RecName: Full=Exostosin-1c; AltName: Ful...    56   6e-06
gb|AAI55813.1| Exostoses (multiple) 1c [Danio rerio]                   56   6e-06
ref|NP_001035420.1| exostosin-1c [Danio rerio] gi|92098257|gb|AA...    56   6e-06

>ref|XP_001769488.1| predicted protein [Physcomitrella patens]
           gi|162679199|gb|EDQ65649.1| predicted protein
           [Physcomitrella patens]
          Length = 344

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 39/71 (54%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
 Frame = -2

Query: 214 WHYPARFPRCTMDVCFNYSRCDNMYELLIYSYNYP-PQLKFLSSIHKTRWHTDNPEKACL 38
           WHYPARFP C+MDVCFNYS+CD   +LLI++YN P P  ++ S I++++++T++P KACL
Sbjct: 2   WHYPARFPLCSMDVCFNYSKCDGSEDLLIFTYNLPAPPKRYFSRINESKYYTNDPAKACL 61

Query: 37  FFLFTETDNPY 5
           F +F + DNP+
Sbjct: 62  FLVFLDGDNPW 72


>ref|XP_001761179.1| predicted protein [Physcomitrella patens]
           gi|162687519|gb|EDQ73901.1| predicted protein
           [Physcomitrella patens]
          Length = 349

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 31/69 (44%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
 Frame = -2

Query: 214 WHYPARFPRCTMDVCFNYSRCDNMYELLIYSYNYPPQLK---FLSSIHKTRWHTDNPEKA 44
           WHYP  FPRC++D CFN+SRC++  E+L+Y+YN P   +   +   +  ++WHT++P++A
Sbjct: 2   WHYPVAFPRCSIDACFNFSRCEHSDEILVYTYNDPEPKQNPTYFELLPSSKWHTNDPQEA 61

Query: 43  CLFFLFTET 17
           CLFF F+++
Sbjct: 62  CLFFYFSDS 70


>ref|XP_001761172.1| predicted protein [Physcomitrella patens]
           gi|162687512|gb|EDQ73894.1| predicted protein
           [Physcomitrella patens]
          Length = 349

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 31/69 (44%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
 Frame = -2

Query: 214 WHYPARFPRCTMDVCFNYSRCDNMYELLIYSYNYPPQLK---FLSSIHKTRWHTDNPEKA 44
           WHYP  FPRC++D CFN+SRC++  E+L+Y+YN P   +   +   +  ++WHT++P++A
Sbjct: 2   WHYPVAFPRCSIDACFNFSRCEHSDEILVYTYNDPEPKQNPTYFELLPSSKWHTNDPQEA 61

Query: 43  CLFFLFTET 17
           CLFF F+++
Sbjct: 62  CLFFYFSDS 70


>ref|XP_002972835.1| hypothetical protein SELMODRAFT_23945 [Selaginella moellendorffii]
           gi|300159436|gb|EFJ26056.1| hypothetical protein
           SELMODRAFT_23945 [Selaginella moellendorffii]
          Length = 305

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 29/64 (45%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
 Frame = -2

Query: 190 RCTMDVCFNYSRCDNMYELLIYSY-NYPPQLKFLSSIHKTRWHTDNPEKACLFFLFTETD 14
           RC+MD CFN+SRC NM  L++++Y ++   +++ + +++TRWHT +PEKAC+F +F +T 
Sbjct: 1   RCSMDACFNFSRCSNMDNLMVFTYEDHNAPVRYFTKLNETRWHTKDPEKACIFMVFLDTS 60

Query: 13  NPYQ 2
           +P+Q
Sbjct: 61  SPWQ 64


>ref|XP_002984407.1| hypothetical protein SELMODRAFT_24030 [Selaginella moellendorffii]
           gi|300147795|gb|EFJ14457.1| hypothetical protein
           SELMODRAFT_24030 [Selaginella moellendorffii]
          Length = 305

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 29/64 (45%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
 Frame = -2

Query: 190 RCTMDVCFNYSRCDNMYELLIYSY-NYPPQLKFLSSIHKTRWHTDNPEKACLFFLFTETD 14
           RC+MD CFN+SRC NM  L++++Y ++   +++ + +++TRWHT +PEKAC+F +F +T 
Sbjct: 1   RCSMDACFNFSRCSNMDNLMVFTYEDHNAPVRYFTKLNETRWHTKDPEKACIFMVFLDTS 60

Query: 13  NPYQ 2
           +P+Q
Sbjct: 61  SPWQ 64


>ref|XP_001754325.1| predicted protein [Physcomitrella patens]
           gi|162694427|gb|EDQ80775.1| predicted protein
           [Physcomitrella patens]
          Length = 308

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 29/62 (46%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
 Frame = -2

Query: 187 CTMDVCFNYSRCDNMYELLIYSYNYP-PQLKFLSSIHKTRWHTDNPEKACLFFLFTETDN 11
           C+MDVCFNY++CD+   LLI++YN P P  ++ S I++++++T++P KACLF +F + D 
Sbjct: 1   CSMDVCFNYTKCDSSENLLIFTYNLPSPPKRYFSRINESKYYTNDPAKACLFLVFLDGDT 60

Query: 10  PY 5
           P+
Sbjct: 61  PW 62


>ref|XP_001761253.1| predicted protein [Physcomitrella patens]
           gi|162687593|gb|EDQ73975.1| predicted protein
           [Physcomitrella patens]
          Length = 336

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/64 (53%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
 Frame = -2

Query: 187 CTMDVCFNYSRCDNMYELLIYSYNYP---PQLKFLSSIHKTRWHTDNPEKACLFFLFTET 17
           C+MD CF+YSRCDN  ELLIY+Y  P   PQ  FL  I+++++HTD+PEKACLF +  + 
Sbjct: 1   CSMDSCFDYSRCDNADELLIYTYYKPGLEPQRYFL-RINESKYHTDDPEKACLFLVPFDN 59

Query: 16  DNPY 5
            +P+
Sbjct: 60  IDPW 63


>ref|XP_001771909.1| predicted protein [Physcomitrella patens]
           gi|162676860|gb|EDQ63338.1| predicted protein
           [Physcomitrella patens]
          Length = 308

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
 Frame = -2

Query: 187 CTMDVCFNYSRCDNMYELLIYSYNYP-PQLKFLSSIHKTRWHTDNPEKACLFFLFTETDN 11
           C+MDVCFNY++CD+  + LI++Y+ P P  ++ S I + +++T++P KACLF +F + D 
Sbjct: 1   CSMDVCFNYTKCDSSEDPLIFTYDLPAPPKRYFSRIGEFKYYTNDPAKACLFLVFLDGDT 60

Query: 10  PY 5
           P+
Sbjct: 61  PW 62


>ref|XP_001769183.1| predicted protein [Physcomitrella patens]
           gi|162679609|gb|EDQ66055.1| predicted protein
           [Physcomitrella patens]
          Length = 433

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = -2

Query: 187 CTMDVCFNYSRCDNMYELLIYSYN--YPPQLKFLSSIHKTRWHTDNPEKACLFFL 29
           C+MD CFNYSRCD M ELL+Y Y+  Y P   F  ++ ++ ++T NP +ACLF +
Sbjct: 86  CSMDNCFNYSRCDKMEELLVYHYDSQYSPDWYFKDALKRSPYYTTNPAEACLFLV 140


>ref|XP_001764615.1| predicted protein [Physcomitrella patens]
           gi|162684193|gb|EDQ70597.1| predicted protein
           [Physcomitrella patens]
          Length = 429

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = -2

Query: 205 PARFPRCTMDVCFNYSRCDNMYELLIYSYNYPPQLK--FLSSIHKTRWHTDNPEKACLFF 32
           P     C+M  CF+YSRCD M ELL+Y Y+ P      F  ++ K+ ++T +P KACLFF
Sbjct: 77  PTESSHCSMGSCFDYSRCDGMEELLVYHYDSPSSQAWYFKQALEKSPYYTVDPSKACLFF 136

Query: 31  LFTET 17
           +  +T
Sbjct: 137 VTVDT 141


>ref|XP_001764506.1| predicted protein [Physcomitrella patens]
           gi|162684370|gb|EDQ70773.1| predicted protein
           [Physcomitrella patens]
          Length = 438

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
 Frame = -2

Query: 199 RFPRCTMDVCFNYSRCDNMYELLIYSYNY--PPQLKFLSSIHKTRWHTDNPEKACLFFL 29
           +F  C+MD CF+YSRCDN  ELLIY Y+        F  ++ ++ ++T +PEKACL+F+
Sbjct: 88  KFSSCSMDSCFDYSRCDNAEELLIYLYDTLDSQTWYFKDALERSPYYTADPEKACLYFV 146


>ref|XP_005058204.1| PREDICTED: exostosin-1c-like isoform X1 [Ficedula albicollis]
           gi|525021414|ref|XP_005058205.1| PREDICTED:
           exostosin-1c-like isoform X2 [Ficedula albicollis]
          Length = 760

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
 Frame = -2

Query: 259 DSSPSSSPWYQQGRAWHYPARFPRCTMDVCFNYSRCDNMYELLIYSYNYPPQ-------- 104
           D  PS     ++  AW    R  RC M+ CF++SRC+  +   +++Y   PQ        
Sbjct: 65  DGDPSLLSPRERRAAWLSIHRSGRCRMETCFDFSRCER-HGFKVFTY---PQERGQPVSE 120

Query: 103 --LKFLSSIHKTRWHTDNPEKACLFFLFTET 17
              K LSSI ++R+HT NPE+ACLF L  +T
Sbjct: 121 TYSKILSSIERSRYHTPNPEEACLFVLSIDT 151


>ref|XP_005803497.1| PREDICTED: exostosin-1-like [Xiphophorus maculatus]
          Length = 607

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
 Frame = -2

Query: 190 RCTMDVCFNYSRCDNMYELLIYSYNYPPQL---------KFLSSIHKTRWHTDNPEKACL 38
           RC M+ CF++SRC + + +    Y YPPQ          K LSSI ++R+HT +P +ACL
Sbjct: 127 RCRMETCFDFSRCQSGFRV----YIYPPQRGDEISETYQKILSSIRESRFHTADPSRACL 182

Query: 37  FFLFTET 17
           F L  +T
Sbjct: 183 FVLAVDT 189


>sp|Q5IGR6.1|EXT1C_DANRE RecName: Full=Exostosin-1c; AltName:
           Full=Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N-
           acetylglucosaminyl-proteoglycan
           4-alpha-N-acetylglucosaminyltransferase 1c; AltName:
           Full=Multiple exostoses protein 1 homolog c
           gi|56785795|gb|AAW29035.1| EXT1c [Danio rerio]
          Length = 737

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
 Frame = -2

Query: 298 PNIPEPQKECPNADSSPSSSPWYQQGRAWHYPARFPRCTMDVCFNYSRCDNMYELLIYSY 119
           PN  E Q +  N    P  SP  Q+ +AW    +  RC MD CF++ RC       +Y  
Sbjct: 55  PNFAE-QLDLQNG-GGPGDSP-RQRKQAWSSIYKDSRCRMDTCFDFGRCQTQSGFRVYI- 110

Query: 118 NYPPQ---------LKFLSSIHKTRWHTDNPEKACLFFLFTET 17
            YPP+          K L+S+ ++R++T +P +ACLF L  +T
Sbjct: 111 -YPPEKGERVSEGYRKILTSVSESRYYTSDPREACLFVLGIDT 152


>gb|AAI55813.1| Exostoses (multiple) 1c [Danio rerio]
          Length = 737

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
 Frame = -2

Query: 298 PNIPEPQKECPNADSSPSSSPWYQQGRAWHYPARFPRCTMDVCFNYSRCDNMYELLIYSY 119
           PN  E Q +  N    P  SP  Q+ +AW    +  RC MD CF++ RC       +Y  
Sbjct: 55  PNFAE-QLDLQNG-GGPGDSP-RQRKQAWSSIYKDSRCRMDTCFDFGRCQTQSGFRVYI- 110

Query: 118 NYPPQ---------LKFLSSIHKTRWHTDNPEKACLFFLFTET 17
            YPP+          K L+S+ ++R++T +P +ACLF L  +T
Sbjct: 111 -YPPEKGERVSESYRKILTSVSESRYYTSDPREACLFVLGIDT 152


>ref|NP_001035420.1| exostosin-1c [Danio rerio] gi|92098257|gb|AAI15217.1| Exostoses
           (multiple) 1c [Danio rerio]
          Length = 737

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
 Frame = -2

Query: 298 PNIPEPQKECPNADSSPSSSPWYQQGRAWHYPARFPRCTMDVCFNYSRCDNMYELLIYSY 119
           PN  E Q +  N    P  SP  Q+ +AW    +  RC MD CF++ RC       +Y  
Sbjct: 55  PNFAE-QLDLQNG-GGPGDSP-RQRKQAWSSIYKDSRCRMDTCFDFGRCQTQSGFRVYI- 110

Query: 118 NYPPQ---------LKFLSSIHKTRWHTDNPEKACLFFLFTET 17
            YPP+          K L+S+ ++R++T +P +ACLF L  +T
Sbjct: 111 -YPPEKGERVSESYRKILTSVSESRYYTSDPREACLFVLGIDT 152


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