BLASTX nr result

ID: Ephedra28_contig00015596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00015596
         (533 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17591.1| unknown [Picea sitchensis]                              71   1e-10
ref|XP_004973483.1| PREDICTED: protein TIFY 6B-like [Setaria ita...    57   2e-06

>gb|ABR17591.1| unknown [Picea sitchensis]
          Length = 526

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 56/140 (40%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
 Frame = -1

Query: 380 NSDKLSTSKAEIATGQSTEATKEQESTTYVNRPVASFPKSSHPN-----------ENSYM 234
           N   +ST   +++      +T     T   +RP      SS PN           + S+M
Sbjct: 306 NGSSMSTKMTDLSPQNFVMSTPVP--TNSHSRPATPTICSSRPNALTSMIPQGPPQKSHM 363

Query: 233 SILQVAP-KIQSCSQSRQSEMISSPKVEINASQRLGA-SLETGNTKQTLSASKP-AVVPR 63
            I QV P K Q CS+  QS  +SS   E+ ++Q  GA S +    KQ +SAS P  V+PR
Sbjct: 364 PIPQVHPQKSQICSKPGQSTGVSSSNGELKSNQNNGAGSNQQEGAKQMVSASTPNGVIPR 423

Query: 62  ALPQARKASLTRFLEKRKER 3
           ALPQARKASL RFLEKR  R
Sbjct: 424 ALPQARKASLARFLEKRNGR 443


>ref|XP_004973483.1| PREDICTED: protein TIFY 6B-like [Setaria italica]
          Length = 424

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
 Frame = -1

Query: 260 SHPNENSYMSILQVAPKIQSCSQSRQSEMISSPKVEINASQRLGASLETGNTKQTL---S 90
           S P+ +S  S + + P++ S S+S  +    S     +    + A     +T Q +   +
Sbjct: 269 SVPHLSSTSSPIPIVPQVVSLSRSTSNCTTESTGPRPSVQMPMTAPTSQASTSQQMPLAT 328

Query: 89  ASKPAVVPRALPQARKASLTRFLEKRKER 3
            S  AVVPRA+PQARKASL RFLEKRKER
Sbjct: 329 TSAAAVVPRAVPQARKASLARFLEKRKER 357


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