BLASTX nr result
ID: Ephedra28_contig00015588
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00015588
(890 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABF97872.1| retrotransposon protein, putative, Ty3-gypsy subc... 71 5e-10
gb|AAM22834.1|AF427791_26 Sukkula-1b polyprotein [Hordeum vulgar... 70 8e-10
gb|AAM22833.1|AF427791_25 Sukkula-1a polyprotein [Hordeum vulgar... 70 8e-10
gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc... 68 5e-09
emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group] 67 7e-09
emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group] 67 7e-09
ref|XP_006607055.1| PREDICTED: uncharacterized protein LOC100778... 67 1e-08
emb|CAE02082.2| OSJNBa0074B10.10 [Oryza sativa Japonica Group] 67 1e-08
emb|CAD41297.2| OSJNBa0020J04.2 [Oryza sativa Japonica Group] 67 1e-08
ref|XP_004146438.1| PREDICTED: uncharacterized protein LOC101209... 66 2e-08
gb|AAV43988.1| putative polyprotein [Oryza sativa Japonica Group] 66 2e-08
ref|XP_006607002.1| PREDICTED: uncharacterized protein LOC100788... 66 2e-08
ref|XP_006603400.1| PREDICTED: uncharacterized protein LOC102659... 66 2e-08
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 66 2e-08
gb|AAV80394.1| polyprotein [Hordeum vulgare subsp. vulgare] 66 2e-08
gb|ABA98370.1| retrotransposon protein, putative, Ty3-gypsy subc... 65 3e-08
gb|ABB47439.2| retrotransposon protein, putative, Ty3-gypsy subc... 65 3e-08
gb|ABC94893.1| polyprotein [Oryza australiensis] 65 3e-08
gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subc... 65 4e-08
gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subc... 65 4e-08
>gb|ABF97872.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1299
Score = 71.2 bits (173), Expect = 5e-10
Identities = 62/195 (31%), Positives = 86/195 (44%), Gaps = 14/195 (7%)
Frame = +2
Query: 104 TRKRRSTSETDTVTERKNEIAESRNDVDSLNTQM------ETGETSSVAKEELRKFQLRY 265
+R+R STS +T T +A V + TQ+ G + EE + +
Sbjct: 3 SRRRASTSNEETQTPDLTTLA----GVMATQTQLLQAIANNQGNRGGSSFEEFMRTKPPT 58
Query: 266 FAGGSNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWWRRIK----- 430
FA E A +W+ +E + L + + DK+ A L G WW K
Sbjct: 59 FATADEPME-AEDWLRIIEKKLT---LVRVREADKVIFAVHQLEGPAGDWWDTYKEAWEE 114
Query: 431 -ADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLDLRRYDIS--P 601
A TW+EF +FR+ FV K+NEFR + QG+ +VQEY F L RY I
Sbjct: 115 DAGEPTWEEFTTVFRENFVPAAVMRMKKNEFRRLRQGNATVQEYLNQFTQLARYAIGDLA 174
Query: 602 PESYLVHKFIMGLND 646
E + KFI GLND
Sbjct: 175 DEEEKIDKFIEGLND 189
>gb|AAM22834.1|AF427791_26 Sukkula-1b polyprotein [Hordeum vulgare subsp. vulgare]
Length = 685
Score = 70.5 bits (171), Expect = 8e-10
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Frame = +2
Query: 296 AMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWWRRIK----ADVHTWDEFKQ 463
A +W+ + +F CS ++P D + A L+G+ +WW+++K A V +W+EF +
Sbjct: 98 AEDWIRDMNKHFECSNVRP---EDYVKFATFQLKGQASIWWQQLKDSRGARVMSWEEFCR 154
Query: 464 IFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLDLRRYDIS--PPESYLVHKFIMG 637
FR ++ F R +FR + QG SV +Y + F +L RY + P + +++F G
Sbjct: 155 DFRSHYIPSSFVEEMREKFRRLKQGGNSVYKYNVEFHELARYALQDIPDQKSKIYQFRGG 214
Query: 638 LNDN 649
L +N
Sbjct: 215 LKEN 218
>gb|AAM22833.1|AF427791_25 Sukkula-1a polyprotein [Hordeum vulgare subsp. vulgare]
Length = 685
Score = 70.5 bits (171), Expect = 8e-10
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Frame = +2
Query: 296 AMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWWRRIK----ADVHTWDEFKQ 463
A +W+ + +F CS ++P D + A L+G+ +WW+++K A V +W+EF +
Sbjct: 98 AEDWIRDMNKHFECSNVRP---EDYVKFATFQLKGQASIWWQQLKDSRGARVMSWEEFCR 154
Query: 464 IFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLDLRRYDIS--PPESYLVHKFIMG 637
FR ++ F R +FR + QG SV +Y + F +L RY + P + +++F G
Sbjct: 155 DFRSHYIPSSFVEEMREKFRRLKQGGNSVYKYNVEFHELARYALQDIPDQKSKIYQFRGG 214
Query: 638 LNDN 649
L +N
Sbjct: 215 LKEN 218
>gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 67.8 bits (164), Expect = 5e-09
Identities = 60/195 (30%), Positives = 85/195 (43%), Gaps = 14/195 (7%)
Frame = +2
Query: 104 TRKRRSTSETDTVTERKNEIAESRNDVDSLNTQM------ETGETSSVAKEELRKFQLRY 265
+R+R +TS +T T N +A + + TQ+ G + E + +
Sbjct: 3 SRRRATTSNDETQTPDLNTLA----GIMATQTQLLQAIASNQGNRGGSSFGEFMRTKPPT 58
Query: 266 FAGGSNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWWRRIK----- 430
FA E A +W+ +E + L + + DK+ A L G WW K
Sbjct: 59 FATADEPME-AEDWLRIIEKKLT---LVRVREADKVIFAVNQLEGPAGDWWDTYKEARED 114
Query: 431 -ADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLDLRRYDIS--P 601
A TW+EF FR+ FV K+NEFR + QG+ +VQEY F L RY I
Sbjct: 115 GAGEPTWEEFTAAFRENFVPTAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLA 174
Query: 602 PESYLVHKFIMGLND 646
E + KFI GLND
Sbjct: 175 DEEEKIDKFIEGLND 189
>emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]
Length = 1470
Score = 67.4 bits (163), Expect = 7e-09
Identities = 60/195 (30%), Positives = 85/195 (43%), Gaps = 14/195 (7%)
Frame = +2
Query: 104 TRKRRSTSETDTVTERKNEIAESRNDVDSLNTQM------ETGETSSVAKEELRKFQLRY 265
+R+R +TS +T T N +A + + TQ+ G + E + +
Sbjct: 3 SRRRATTSNDETQTPDLNTLA----GIMATQTQLLQAIASNQGNRGGSSFGEFMRTKPPT 58
Query: 266 FAGGSNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWWRRIK----- 430
FA E A +W+ +E + L + + DK+ A L G WW K
Sbjct: 59 FATADEPME-AEDWLRIIEKKLT---LVRVREADKVIFAVNQLEGPAGDWWDTYKEARED 114
Query: 431 -ADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLDLRRYDIS--P 601
A TW+EF FR+ FV K+NEFR + QG+ +VQEY F L RY I
Sbjct: 115 GAGEPTWEEFTVAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLA 174
Query: 602 PESYLVHKFIMGLND 646
E + KFI GLND
Sbjct: 175 DEEEKIDKFIEGLND 189
>emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]
Length = 1470
Score = 67.4 bits (163), Expect = 7e-09
Identities = 60/195 (30%), Positives = 85/195 (43%), Gaps = 14/195 (7%)
Frame = +2
Query: 104 TRKRRSTSETDTVTERKNEIAESRNDVDSLNTQM------ETGETSSVAKEELRKFQLRY 265
+R+R +TS +T T N +A + + TQ+ G + E + +
Sbjct: 3 SRRRATTSNDETQTPDLNTLA----GIMATQTQLLQAIASNQGNRGGSSFGEFMRTKPPT 58
Query: 266 FAGGSNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWWRRIK----- 430
FA E A +W+ +E + L + + DK+ A L G WW K
Sbjct: 59 FATADEPME-AEDWLRIIEKKLT---LVRVREADKVIFAVNQLEGPAGDWWDTYKEARED 114
Query: 431 -ADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLDLRRYDIS--P 601
A TW+EF FR+ FV K+NEFR + QG+ +VQEY F L RY I
Sbjct: 115 GAGEPTWEEFTVAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLA 174
Query: 602 PESYLVHKFIMGLND 646
E + KFI GLND
Sbjct: 175 DEEEKIDKFIEGLND 189
>ref|XP_006607055.1| PREDICTED: uncharacterized protein LOC100778333, partial [Glycine
max]
Length = 560
Score = 66.6 bits (161), Expect = 1e-08
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Frame = +2
Query: 275 GSNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWW--------RRIK 430
G + + ++W EH F+C++ +D K+ LA ++WW R +
Sbjct: 89 GRSDPDAYLDWEMKTEHVFACNDY---TDAQKVKLAIAEFSDYALVWWHKYQREMLREER 145
Query: 431 ADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAF-LDLRRYDISPPE 607
+V TW E K++ RK +V +N R + +++ QG+L+V+EYY + L R +I
Sbjct: 146 REVDTWTEMKRVMRKRYVPTSYNRTMRQKLQELSQGNLTVEEYYKEMEMALVRANIEEDS 205
Query: 608 SYLVHKFIMGLN 643
+ +F+ GLN
Sbjct: 206 EDTMARFLNGLN 217
>emb|CAE02082.2| OSJNBa0074B10.10 [Oryza sativa Japonica Group]
Length = 720
Score = 66.6 bits (161), Expect = 1e-08
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 13/206 (6%)
Frame = +2
Query: 68 IVICERNAMAPGTRKRRSTSETDTVTERKNEIAESRNDV-DSLNTQMETGETSSVAKEEL 244
+V+ RN P + E T+ + + + N + Q G + + +L
Sbjct: 1 MVLTRRNGNGPNNNNNNNNGENPTLAQVLAQQTQLMNMMMQQFQNQQNQGNNHAPPQNKL 60
Query: 245 RKFQLRY----FAGGSNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVL 412
+F LR F+ +N E A +W+ +E +L +D +K+ A L G T
Sbjct: 61 AEF-LRVRPPIFSSTTNPVE-AGDWLHAIEKKL---DLLQCTDQEKVSFASHQLHGATSE 115
Query: 413 WW-----RRIKADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLD 577
WW R A+ TW EF FRKT + K+ EFR + QG SV EY F
Sbjct: 116 WWDHFRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNR 175
Query: 578 LRRY---DISPPESYLVHKFIMGLND 646
L RY D+ E +F+ GLND
Sbjct: 176 LARYAPEDVRTDEE-RQERFLEGLND 200
>emb|CAD41297.2| OSJNBa0020J04.2 [Oryza sativa Japonica Group]
Length = 1537
Score = 66.6 bits (161), Expect = 1e-08
Identities = 46/126 (36%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Frame = +2
Query: 293 KAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWWRRIK------ADVHTWDE 454
+A +W+ +E + L + +TDK+ A L G WW K A TW+E
Sbjct: 2 EAEDWLRIIEKKLT---LVRVRETDKVIFAVNQLEGPASDWWDTYKEARENDAGEPTWEE 58
Query: 455 FKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLDLRRYDIS--PPESYLVHKF 628
F FR+ FV K+NEFR + QG+ +VQEY F L RY I E + KF
Sbjct: 59 FTAAFRENFVPAAVMRMKKNEFRWLRQGNTTVQEYLNKFTQLARYAIGDLADEEEKIDKF 118
Query: 629 IMGLND 646
I GLND
Sbjct: 119 IEGLND 124
>ref|XP_004146438.1| PREDICTED: uncharacterized protein LOC101209878 isoform 1 [Cucumis
sativus] gi|449457405|ref|XP_004146439.1| PREDICTED:
uncharacterized protein LOC101209878 isoform 2 [Cucumis
sativus]
Length = 295
Score = 66.2 bits (160), Expect = 2e-08
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Frame = +2
Query: 74 ICERNAMAPGTRKRRSTSETDTVTERKNEIAESRNDVDSLNTQMETGETSSVAKEELRKF 253
+ + + A TR + +T T ++++A++ Q + S+ AK LR F
Sbjct: 37 VSQADLTAMSTRLEQMFKDTVTKVLAQHQLAQAAPSQGQAAPQDLPNQLSAEAKH-LRDF 95
Query: 254 QL---RYFAGGSNIEEKAMEWVDHLE---HYFSCSELKPISDTDKIGLACLNLRGRTVLW 415
++ + F G S M W+ +E HY C D K+ A LR R +W
Sbjct: 96 RIYDPQTFNGLSEDPINVMLWLSSVERIFHYMKCP------DNQKVQCAVFLLRERAAIW 149
Query: 416 WRRIK------ADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAF-- 571
W ++ + TWD+FK+ F F +KR EF D+ QG ++++EY F
Sbjct: 150 WLSVERMLGGNVNQFTWDQFKESFYAKFFPASLRDDKRQEFIDLKQGQMTLEEYDYEFDI 209
Query: 572 LDLRRYDISPPESYLVHKFIMGLNDN 649
L L ++ E+ +F+ GL ++
Sbjct: 210 LSLFAPELVETEAARAQRFVWGLKND 235
>gb|AAV43988.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1594
Score = 66.2 bits (160), Expect = 2e-08
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 13/217 (5%)
Frame = +2
Query: 35 TLVLVGSEVTIIVICERNAMAPGTRKRRSTSETDTVTERKNEIAESRNDV-DSLNTQMET 211
T L V +V+ N P + E T+ + + A+ N + L Q
Sbjct: 152 TPALADPPVVNMVLTRSNGNGPNNNNNNNNGENPTLAQVLAQQAQLMNMMMQQLQNQQNQ 211
Query: 212 GETSSVAKEELRKFQLRY----FAGGSNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGL 379
G + + +L +F LR F+ +N E A +W+ +E +L +D +K+
Sbjct: 212 GNNHAPPQNKLAEF-LRVRPPTFSSTNNPVE-AGDWLHAIEKKL---DLLQCTDQEKVSF 266
Query: 380 ACLNLRGRTVLWW-----RRIKADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDL 544
A L G WW R A+ TW EF F+KT + K+ EFR + QG
Sbjct: 267 ASHQLHGPASEWWDHFRLNRTTAEPITWLEFTAAFQKTHIPSGVVSLKKKEFRSLTQGSR 326
Query: 545 SVQEYYLAFLDLRRY---DISPPESYLVHKFIMGLND 646
SV EY F L RY D+ E KF+ GLND
Sbjct: 327 SVTEYLHEFNRLARYAPEDVRTDEE-RQEKFLEGLND 362
>ref|XP_006607002.1| PREDICTED: uncharacterized protein LOC100788838 [Glycine max]
Length = 519
Score = 65.9 bits (159), Expect = 2e-08
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Frame = +2
Query: 275 GSNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWW--------RRIK 430
G + + ++W EH F+C++ +D K+ LA ++WW R +
Sbjct: 89 GRSDPDAYLDWEMKTEHVFACNDY---TDAQKVKLAAAEFSDYALVWWHKYQREMLREER 145
Query: 431 ADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAF-LDLRRYDISPPE 607
+V TW E K++ RK +V +N R + + + QG+L+V+EYY + L R +I
Sbjct: 146 REVDTWTEMKRVMRKRYVPTSYNRTMRQKLQGLSQGNLTVEEYYKEMEMALVRANIEEDS 205
Query: 608 SYLVHKFIMGLN 643
+ +F+ GLN
Sbjct: 206 EDTMARFLNGLN 217
>ref|XP_006603400.1| PREDICTED: uncharacterized protein LOC102659640 [Glycine max]
Length = 594
Score = 65.9 bits (159), Expect = 2e-08
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Frame = +2
Query: 275 GSNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWW--------RRIK 430
G + + ++W EH F+C++ +D K+ LA ++WW R +
Sbjct: 89 GRSDPDAYLDWEMKTEHVFACNDY---TDAQKVKLAAAEFSDYALVWWHKYQREMLREER 145
Query: 431 ADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAF-LDLRRYDISPPE 607
+V TW E K++ RK +V +N R + + + QG+L+V+EYY + L R +I
Sbjct: 146 REVDTWTEMKRVMRKRYVPTSYNRTMRQKLQGLSQGNLTVEEYYKEMEMALVRANIEEDS 205
Query: 608 SYLVHKFIMGLN 643
+ +F+ GLN
Sbjct: 206 EDTMARFLNGLN 217
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 65.9 bits (159), Expect = 2e-08
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Frame = +2
Query: 275 GSNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWW--------RRIK 430
G + + ++W EH F+C++ +D K+ LA ++WW R +
Sbjct: 89 GRSDPDAYLDWEMKTEHVFACNDY---TDAQKVKLAAAEFSDYALVWWHKYQREMLREER 145
Query: 431 ADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAF-LDLRRYDISPPE 607
+V TW E K++ RK +V +N R + + + QG+L+V+EYY + L R +I
Sbjct: 146 REVDTWTEMKRVMRKRYVPTSYNRTMRQKLQGLSQGNLTVEEYYKEMEMALVRANIEEDS 205
Query: 608 SYLVHKFIMGLN 643
+ +F+ GLN
Sbjct: 206 EDTMARFLNGLN 217
>gb|AAV80394.1| polyprotein [Hordeum vulgare subsp. vulgare]
Length = 1486
Score = 65.9 bits (159), Expect = 2e-08
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Frame = +2
Query: 296 AMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWWRRIKAD----VHTWDEFKQ 463
A +W+ + + CS ++P D + A L+G+ +WW+ +K V +WDEF +
Sbjct: 97 AEDWIRDMNKHSECSNVRP---EDYVKFATFQLKGQASIWWQHLKDSRGGRVMSWDEFCR 153
Query: 464 IFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLDLRRYDIS--PPESYLVHKFIMG 637
FR ++ F R +FR + QG+ SV +Y + F +L RY + P + +++F G
Sbjct: 154 DFRSHYIPSSFVEEMREKFRRLKQGNNSVYKYNVEFHELARYALQDVPDQKSKIYQFRGG 213
Query: 638 LNDN 649
L ++
Sbjct: 214 LKED 217
>gb|ABA98370.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 468
Score = 65.5 bits (158), Expect = 3e-08
Identities = 65/228 (28%), Positives = 94/228 (41%), Gaps = 15/228 (6%)
Frame = +2
Query: 86 NAMAPGTRKRRSTSETDTVTERKNEIAESRNDV-DSLNTQMETGETSSVAKEELRKFQLR 262
N P + E T+ + + + N + L Q G + + +L +F LR
Sbjct: 245 NGNGPNNPNNNNNGENPTLAQVLAQQTQLMNMMMQQLQNQQNQGNNHAPPQNKLAEF-LR 303
Query: 263 Y----FAGGSNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWW---- 418
F+ +N E A +W+ +E +L +D +K+ A L G WW
Sbjct: 304 VRPPVFSSTTNPVE-AGDWLHAIEKKL---DLLQCTDQEKVSFASHQLHGPASEWWDHFR 359
Query: 419 -RRIKADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLDLRRY-- 589
RI A+ TW EF FRKT + K+ EFR + QG SV EY F L RY
Sbjct: 360 LNRITAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAP 419
Query: 590 -DISPPESYLVHKFIMGLNDNHPQAQLLSIGPK--SIEDVMRRLF*TC 724
D+ E KF+ GLND + P S ++ +R F TC
Sbjct: 420 EDVRNDED-RQEKFLEGLNDELSYPLMTGDYPDFLSRPEITQRAFLTC 466
>gb|ABB47439.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1326
Score = 65.1 bits (157), Expect = 3e-08
Identities = 60/206 (29%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Frame = +2
Query: 68 IVICERNAMAPGTRKRRSTSETDTVTERKNEIAESRNDV-DSLNTQMETGETSSVAKEEL 244
+V+ N P + + E T+ + + + N + L Q G + + +L
Sbjct: 1 MVLTRSNGNGPNSNNNNNNGENPTLAQVLAQQTQLMNMMMQQLQNQQNQGNNHAPPQNKL 60
Query: 245 RKFQLRY----FAGGSNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVL 412
+F LR F+ +N E A +W+ +E +L +D +K+ A L G
Sbjct: 61 AEF-LRVRPPIFSSTTNPVE-AGDWLHAIEKKM---DLLQCTDQEKVSFASHQLLGPASE 115
Query: 413 WW-----RRIKADVHTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLD 577
WW RI A+ TW EF FRKT + K+ EFR + QG SV EY F
Sbjct: 116 WWDHFRLNRITAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNR 175
Query: 578 LRRY---DISPPESYLVHKFIMGLND 646
L RY D+ E KF+ GLND
Sbjct: 176 LARYAPEDLRNDEE-RQEKFLGGLND 200
>gb|ABC94893.1| polyprotein [Oryza australiensis]
Length = 1469
Score = 65.1 bits (157), Expect = 3e-08
Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Frame = +2
Query: 296 AMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWWRRIK------ADVHTWDEF 457
A +W+ +E + L + + D++ A L G WW K A TW+EF
Sbjct: 68 AEDWLRVIEKKLT---LVRVREADRVVFATNQLEGPASDWWDTYKETRAEDAGEPTWEEF 124
Query: 458 KQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLDLRRYDIS--PPESYLVHKFI 631
FR+ FV K+NEFR + QG+ SVQEY F L RY S E + KFI
Sbjct: 125 TAAFRENFVPAAVMRMKKNEFRRLRQGNTSVQEYLNKFTQLARYATSDLADEEEKIDKFI 184
Query: 632 MGLND 646
GLND
Sbjct: 185 EGLND 189
>gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1226
Score = 64.7 bits (156), Expect = 4e-08
Identities = 59/191 (30%), Positives = 80/191 (41%), Gaps = 10/191 (5%)
Frame = +2
Query: 104 TRKRRSTSETDTVTERKNEIAESRNDVDSLNTQMETGETSSVAKEELRKFQ--LRYFAGG 277
+R+R STS +T T +A V + TQ+ ++ E F +
Sbjct: 3 SRRRASTSNDETQTPDLTTLA----GVMATQTQLLQAIANNQGNHEGSSFGEFMSTKPPT 58
Query: 278 SNIEEKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWWRRIK------ADV 439
++ ME D L L + + DK+ A L G WW K A
Sbjct: 59 FTTTDEPMEAEDWLRIIEKKLTLIRVREADKVIFAVNQLEGPAGDWWDTYKEAREEDAGE 118
Query: 440 HTWDEFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLDLRRYDIS--PPESY 613
TW+EF FR+ FV K+NEFR + QG+ +VQEY F L RY I E
Sbjct: 119 PTWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYAIGDLANEEE 178
Query: 614 LVHKFIMGLND 646
+ KFI GLND
Sbjct: 179 KIDKFIEGLND 189
>gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1712
Score = 64.7 bits (156), Expect = 4e-08
Identities = 46/127 (36%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Frame = +2
Query: 290 EKAMEWVDHLEHYFSCSELKPISDTDKIGLACLNLRGRTVLWWRRIK------ADVHTWD 451
E+ M+ D L L + + DK+ A L G WW K A TW+
Sbjct: 404 EEPMDAEDCLRVIEKKLTLVRVREADKVIFAANQLEGPAGDWWDTYKEAREDGAGEPTWE 463
Query: 452 EFKQIFRKTFVLERFNCNKRNEFRDICQGDLSVQEYYLAFLDLRRYDIS--PPESYLVHK 625
EF FR+ FV K+NEFR + QG+ +VQEY F L RY I E + K
Sbjct: 464 EFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLADEEEKIDK 523
Query: 626 FIMGLND 646
FI GLND
Sbjct: 524 FIEGLND 530