BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00015563
         (2880 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003240529.1| PREDICTED: copia protein-like [Acyrthosiphon...   179   2e-88
emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]   159   7e-75
emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]   240   3e-60
emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]   238   1e-59
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi...   232   6e-58
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             230   2e-57
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   230   3e-57
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   229   4e-57
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]           229   4e-57
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   229   4e-57
ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669...   229   5e-57
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...   228   9e-57
ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665...   228   1e-56
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   227   2e-56
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   226   3e-56
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         226   4e-56
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   226   4e-56
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   225   1e-55
gb|ABR16307.1| unknown [Picea sitchensis]                             223   3e-55
gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]   223   4e-55

>ref|XP_003240529.1| PREDICTED: copia protein-like [Acyrthosiphon pisum]
          Length = 1279

 Score =  179 bits (453), Expect(3) = 2e-88
 Identities = 115/366 (31%), Positives = 190/366 (51%), Gaps = 13/366 (3%)
 Frame = -1

Query: 2004 VFSPNNTKN*HVIISQNNYQIKVLTFE-----DIADYATNLVEIEKFHKKLGHLNYKYLH 1840
            V++  N KN  ++       +  LTF        A+Y+ +   I+ +H++LGHLN++ L 
Sbjct: 372  VYNKLNNKNNLIMKGSKVGNLYELTFNLNQNMPFANYSYSNT-IDLWHRRLGHLNFQTLE 430

Query: 1839 ISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GFRAKKFLELIHSDICGSMPYKTH 1660
                 +DG         + C  C+  K   LPF     RA + LELIHSD+CG +  +T 
Sbjct: 431  KLPDIVDGICINNEKYNEICGVCISSKQAALPFSGTRVRATRPLELIHSDVCGPIEPQTW 490

Query: 1659 IVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKSYKIGCLRSDGGT-EYN 1483
                Y+++FIDD + +  +YLL  K +VF  F ++   V       I  +R D G  EY 
Sbjct: 491  DNKRYYVSFIDDNTHFTVIYLLSKKNEVFSAFKQYEANVTARFGQMISRIRCDNGRGEYY 550

Query: 1482 SIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLHDANLDKTWWGEALLT 1303
            +  FK FC  KGI+ + TVPY PQQN V+ER NRT++E  R L+ D+ ++K +WGEA+ T
Sbjct: 551  NDNFKGFCVQKGIELEYTVPYTPQQNCVAERMNRTIMERARALIFDSGINKEFWGEAVYT 610

Query: 1302 TNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLISKEKWRKLDDKAKKGIF 1123
              Y+ N  P  AL  K+P E+ Y  KP +S+   FG   +  I K+  +K+  K    ++
Sbjct: 611  AVYLINRCPTSALKDKTPAELWYKSKPTLSNIRLFGCKAFLQIPKQLRKKIGFKKNCSMY 670

Query: 1122 ------IEYPTGTKGYRLIEMETRNIIISRE-IKEADTESYEYDKTIQQNAPKNKNLLDK 964
                  + +   T   +  E     I+++ + I +++ ES + D+  ++     ++L  +
Sbjct: 671  YVLGRNVIFDENTYQNKPPETIVNRIVLNNDNIDKSEEESTKQDELAEELHKFEEDLDQE 730

Query: 963  IETTIP 946
            +++T+P
Sbjct: 731  VKSTVP 736



 Score =  172 bits (435), Expect(3) = 2e-88
 Identities = 87/255 (34%), Positives = 153/255 (60%), Gaps = 6/255 (2%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            K N W L  LP+G++ VG +W++ +K    GS+ KYK+R+V QGFSQKEG+DY DT+ P 
Sbjct: 799  KNNTWTLSHLPKGRKVVGTKWVFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPV 858

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLSCKILKSL 407
            AK+ T+++++++A ++ W L     K+AFL G +TE+IY++ P+     +++  K+ KSL
Sbjct: 859  AKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQPEGLNYNSDMIFKLNKSL 918

Query: 406  YGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTRE--VLLAFHVXXXXXXXXXX 233
            YGLK A + W+++ +++++  G  +S SD  L+ +  N     + L  +V          
Sbjct: 919  YGLKQASKCWHERFDNYIAKLGLEQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNM 978

Query: 232  XXXXDFKRKLREEFEITDLGNVECYLGLQLH--KSNNGYVLNQEAYASKLIEEYNLTNSN 59
                + K  L+EEFE+ D G++  +LGL+++  K+     +NQ  Y   +++++N+ N N
Sbjct: 979  LKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCN 1038

Query: 58   GRKYPLDSGAKLGED 14
                P++S   + ED
Sbjct: 1039 TISTPIESKLNIEED 1053



 Score = 26.6 bits (57), Expect(3) = 2e-88
 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = -2

Query: 836 IPKSPTEAIKKQH---WKNAMDEEMTNMKK 756
           +PK+ + A+   H   WKNA+ +E+ ++KK
Sbjct: 770 VPKTYSSAVTGVHANLWKNAIQDEIDSLKK 799


>emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]
          Length = 1248

 Score =  159 bits (401), Expect(3) = 7e-75
 Identities = 91/257 (35%), Positives = 141/257 (54%), Gaps = 7/257 (2%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            K   W L +LP GK+ VGC+W+YTVK + +GS+++YK+R+V +G++Q  GIDY++TF P 
Sbjct: 795  KNKTWELVKLPTGKKPVGCKWVYTVKYRADGSIERYKARLVAKGYAQTYGIDYQETFAPV 854

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLS----CKI 419
            AKM T++ ++SL     W+L  F  K+AFL+G + EEIYM+ P  Y+  NNL+    CK+
Sbjct: 855  AKMNTVRVLLSLTANYNWDLQQFDVKNAFLHGELEEEIYMEVPPGYD--NNLAAHIVCKL 912

Query: 418  LKSLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREV-LLAFHVXXXXXXX 242
             K+LYGLK +PRAW+ +    + + G+ +S  D  LF    ++R +  L  +V       
Sbjct: 913  KKALYGLKQSPRAWFGRFARVIITMGYRQSQGDHMLFIKHSSSRRLTALLVYVDDIIVTG 972

Query: 241  XXXXXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNS 62
                      + L +EFEI  LG ++ +L                 Y + L++E   T  
Sbjct: 973  NDDKERQVLNQCLAKEFEIKALGRLKYFL----------------KYVTDLLKETGKTAC 1016

Query: 61   NGRKYPLDSGAKLGEDE 11
                 P+D   +L E E
Sbjct: 1017 KPASTPIDPNLRLEEAE 1033



 Score =  144 bits (364), Expect(3) = 7e-75
 Identities = 93/333 (27%), Positives = 170/333 (51%), Gaps = 5/333 (1%)
 Frame = -1

Query: 1914 DYATNLVEIEKFHKKLGHLNYKYLHISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT 1735
            D++ N  ++   H++LGH +++ + I   +L      + +   +CE C + KH ++ FP 
Sbjct: 409  DFSFNKEKVWLHHRRLGHPSFRVIKILFPSLFKG---LDVEHFHCEVCELAKHKRVSFPI 465

Query: 1734 *GFRAKKFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKF 1555
               R+     LIHSDI G  P        +F++FIDD +R  W++LLK K DV      F
Sbjct: 466  SNKRSFIPFYLIHSDIWGPSPIPNITGAKWFVSFIDDCTRVTWIFLLKHKFDVSTVLPNF 525

Query: 1554 RKLVQIEKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTL 1375
              +++ +    I   RSD   +Y + +   + + +GI  + +    PQQNGV+ER N  L
Sbjct: 526  CSMIKTQFGVNIKRFRSDNAKDYFNQVLTPYFQREGIIHESSCVNTPQQNGVAERKNGHL 585

Query: 1374 VEAVRCLLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFME-- 1201
            + + R  +   N+ K++WGEA+LTT ++ N  P++ L  KSP ++L    PN+       
Sbjct: 586  LNSTRSFMFQKNVPKSFWGEAVLTTAHLINRLPSRILGFKSPMDILSTFYPNLHTTNNLV 645

Query: 1200 ---FGKMYYYLISKEKWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNIIISREIKEADT 1030
               FG + +  +  +   KLD +A K +F+ Y +  KG      +   +  S ++++ + 
Sbjct: 646  PRIFGCVAFVHVHNQNRGKLDPRALKCVFLGYSSTQKG------KKTGVPESVQVQDFNP 699

Query: 1029 ESYEYDKTIQQNAPKNKNLLDKIETTIPKGLKK 931
             S E + TI   + ++K+ ++  +  +P  ++K
Sbjct: 700  NS-ENEVTISNPSLQSKSHVNNDDQDLPIVVRK 731



 Score = 28.5 bits (62), Expect(3) = 7e-75
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -2

Query: 842 LAIPKSPTEAIKKQHWKNAMDEEMTNMKK 756
           ++IP + +EA+  + WK AM+ EM  ++K
Sbjct: 767 ISIPTTVSEALTDEKWKQAMNVEMEALEK 795


>emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]
          Length = 1269

 Score =  240 bits (612), Expect = 3e-60
 Identities = 128/330 (38%), Positives = 189/330 (57%), Gaps = 3/330 (0%)
 Frame = -1

Query: 1992 NNTKN*HVIISQNNYQIKVLTFEDIADYATNLVEIEKFHKKLGHLNYKYLHISKQN--LD 1819
            + TK   + ++ N++ +K+   E    ++  + E   +HK+ GH N K L   ++   ++
Sbjct: 410  HGTKIAKIKMNGNSFYLKLDLVEGHV-FSAKIDESVVWHKRYGHFNLKSLRFMQEAGMVE 468

Query: 1818 GSPNKISIPKQNCESCVIGKHHKLPFP-T*GFRAKKFLELIHSDICGSMPYKTHIVYIYF 1642
              P +IS+  Q CESC +GK  + PFP     RA   LELIHSDICG M   +    +YF
Sbjct: 469  DMP-EISVNAQTCESCELGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTSLSNNVYF 527

Query: 1641 ITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKSYKIGCLRSDGGTEYNSIIFKNF 1462
              FIDD+SR  WVY LK K  V   F  F+K+V+ +    +  LR+D G EY S  F  F
Sbjct: 528  ALFIDDFSRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQNVKVLRTDNGGEYTSKEFSVF 587

Query: 1461 CENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLHDANLDKTWWGEALLTTNYITNH 1282
            C+  GI  Q+T PY+PQQNGVS+R NRT++E  RC+L +  L K  W EA+ T+ Y+ N 
Sbjct: 588  CQEAGIVHQLTAPYSPQQNGVSKRKNRTVMEMARCMLFEKKLPKLLWAEAVNTSVYLLNR 647

Query: 1281 WPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLISKEKWRKLDDKAKKGIFIEYPTGT 1102
             P K++  K+P E   GVKP++ H   FG   Y  +   K  KLD++A+KG+F+ Y   +
Sbjct: 648  LPTKSVQSKTPIEAWSGVKPSVKHLKVFGSFCYLHVPSVKRGKLDERAEKGVFVGYVAES 707

Query: 1101 KGYRLIEMETRNIIISREIKEADTESYEYD 1012
            KGYR+  +    I+ISR++   +   + +D
Sbjct: 708  KGYRIYSLSRMKIVISRDVHFDENSYWNWD 737



 Score =  166 bits (420), Expect = 5e-38
 Identities = 85/256 (33%), Positives = 156/256 (60%), Gaps = 6/256 (2%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            +   W+L ELPE K  +G +W++  K   +GS+ ++K+R+VV+GF+Q  G+DY DTF P 
Sbjct: 798  RNGTWKLTELPEAKNAIGVKWVFRTKFNSDGSIFRHKARLVVKGFAQVAGVDYGDTFAPV 857

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYE--DQNNLSCKILK 413
            A+  TI+ +++LA + GW+++H   KSAFLNG + EEIY++ P+ +E     +   K+ K
Sbjct: 858  ARHDTIRLLLALAGQMGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKLHK 917

Query: 412  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NT--REVLLAFHVXXXXXXXX 239
            +LYGLK APRAWY +++  L   GF +S ++  L Y+  N    +++++ +V        
Sbjct: 918  ALYGLKQAPRAWYSRIDSHLIQLGFRRSENEATL-YLKQNDDGLQLVVSLYVDDMLVTGS 976

Query: 238  XXXXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSN 59
                  DFK ++++ FE++DLG +  +LG+++++ + G  ++Q  Y   +++++ L +  
Sbjct: 977  NVKLLADFKMEMQDVFEMSDLGIMNYFLGMEIYQCSWGIFISQRKYVMDILKKFKLESCK 1036

Query: 58   GRKYPLDSGAKLGEDE 11
                PL    K+ +++
Sbjct: 1037 EVATPLAQNEKISKND 1052


>emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]
          Length = 2041

 Score =  238 bits (606), Expect = 1e-59
 Identities = 129/329 (39%), Positives = 188/329 (57%), Gaps = 5/329 (1%)
 Frame = -1

Query: 1911 YATNLVEIEKFHKKLGHLNYKYLHISKQN--LDGSPNKISIPKQNCESCVIGKHHKLPFP 1738
            ++  + E   +HK+  H N K L   ++   ++  P +IS+  Q CESC +GK  + PFP
Sbjct: 1169 FSAKIDESVVWHKRYXHFNLKSLRFMQEAXMVEDMP-EISVNAQTCESCELGKQQRQPFP 1227

Query: 1737 -T*GFRAKKFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFI 1561
                 RA   LELIHSDICG M   +    +YF  FIDD+SR  WVY LK K  V   F 
Sbjct: 1228 QNMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFK 1287

Query: 1560 KFRKLVQIEKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NR 1381
             F+K+V+ +    +  LR+D G EY S  F  FC+  GI  Q+T PY+PQ NGVSER NR
Sbjct: 1288 SFKKMVETQSGQXVKVLRTDNGGEYTSKEFSVFCQEAGIVHQLTAPYSPQXNGVSERKNR 1347

Query: 1380 TLVEAVRCLLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFME 1201
            T++E  RC+L +  L K  W EA+ T+ Y+ N  P K++  K+P E   GVKP++ H   
Sbjct: 1348 TVMEMARCMLFEKKLPKLLWAEAVNTSVYLLNRLPTKSVQSKTPIEAWSGVKPSVKHLKV 1407

Query: 1200 FGKMYYYLISKEKWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNIIISREIKEADTESY 1021
            FG   Y  +   K  KLD++A+KG+F+ Y   +KGYR+  +    I+ISR++   +   +
Sbjct: 1408 FGSFCYLHVPSVKRGKLDERAEKGVFVGYAAESKGYRIYSLSRMKIVISRDVHFDENSYW 1467

Query: 1020 EYD-KTIQQNAPKNKNLLD-KIETTIPKG 940
             +D K + +      ++L+  IE+TI +G
Sbjct: 1468 XWDLKKVHKCDQTTPSILEPAIESTIIEG 1496



 Score =  166 bits (421), Expect = 4e-38
 Identities = 86/256 (33%), Positives = 156/256 (60%), Gaps = 6/256 (2%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            +   W+L ELPE K  +G +W++  K   +GS+ ++K+R+VV+GF+Q  G+DY DTF P 
Sbjct: 1553 RNGTWKLTELPEAKNAIGVKWVFRTKFNSDGSIFRHKARLVVKGFAQVAGVDYGDTFAPV 1612

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYE--DQNNLSCKILK 413
            A+  TI+ +++LA + GW+++H   KSAFLNG + EEIY++ P+ +E     +   K+ K
Sbjct: 1613 ARHDTIRLLLALAGQMGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKLHK 1672

Query: 412  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NT--REVLLAFHVXXXXXXXX 239
            +LYGLK APRAWY +++  L   GF +S ++  L Y+  N    +++++ +V        
Sbjct: 1673 ALYGLKQAPRAWYSRIDSHLIQLGFRRSENEATL-YLKQNDDGLQLVVSLYVDDMLVTGS 1731

Query: 238  XXXXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSN 59
                  DFK ++++ FE+ DLG +  +LG+++++ + G  ++Q  YA  +++++ L +  
Sbjct: 1732 NVKLLADFKMEMQDVFEMFDLGIMNYFLGMEIYQCSWGIFISQRKYAMDILKKFKLESCK 1791

Query: 58   GRKYPLDSGAKLGEDE 11
                PL    K+ +++
Sbjct: 1792 EVATPLAQNEKISKND 1807


>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 822

 Score =  232 bits (592), Expect = 6e-58
 Identities = 133/318 (41%), Positives = 187/318 (58%), Gaps = 3/318 (0%)
 Frame = -1

Query: 1953 NYQIKVLTFEDIADYATNLVEIEKFHKKLGHLNYKYLHI--SKQNLDGSPNKISIPKQNC 1780
            ++ ++ L+ E+ A  A +    E +HK+LGH  +  L I  SK+ + G P K ++ +  C
Sbjct: 137  SFHLRWLSNEETAMVAKDEAT-ELWHKRLGHTGHSNLKILQSKEMVTGLP-KFNVEEGKC 194

Query: 1779 ESCVIGKHHKLPFPT*G-FRAKKFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWV 1603
            ESC++ KH + PFP     RAK  LELIHSD+CG M   +     Y +TFIDD +R  WV
Sbjct: 195  ESCILSKHSRDPFPKESETRAKHKLELIHSDVCGPMQNSSINGSRYILTFIDDATRMVWV 254

Query: 1602 YLLKIKKDVFQTFIKFRKLVQIEKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVP 1423
            Y LK K +VFQTF KF+ LV+   + +I  LR D GTEY S  F  F E  GI+RQ+T  
Sbjct: 255  YFLKAKSEVFQTFKKFKNLVENNANCRIKKLRIDRGTEYLSKEFSEFLEGNGIERQLTAA 314

Query: 1422 YNPQQNGVSER*NRTLVEAVRCLLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPTE 1243
            Y+PQQN VSER NR+LVE  R ++   +L    W EA+    Y  N  P + L  K+P E
Sbjct: 315  YSPQQNEVSERRNRSLVEMARAMIKAKDLPLKLWAEAVHVAAYAQNRTPTRTLKNKTPLE 374

Query: 1242 MLYGVKPNISHFMEFGKMYYYLISKEKWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNI 1063
                 KP++SH   FG + Y  I  EK RK DDK+K+ IF+ Y + TKGYR+  ++   I
Sbjct: 375  AWSDSKPSVSHMKVFGSICYVHIPDEKRRKWDDKSKRAIFVGYSSQTKGYRVYLLKENKI 434

Query: 1062 IISREIKEADTESYEYDK 1009
             ISR++   +   ++++K
Sbjct: 435  DISRDVIFDEDSKWDWEK 452



 Score =  155 bits (391), Expect = 1e-34
 Identities = 84/239 (35%), Positives = 144/239 (60%), Gaps = 9/239 (3%)
 Frame = -3

Query: 730  PEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPTAKMQTIQSII 551
            P G   V  +W++ +K    G++ K+K+R+V +GF+Q+ G+DY +TF P ++ +TI+ I+
Sbjct: 501  PGGSTSV--KWIFRLKTDAEGNVVKHKARLVAKGFTQQHGVDYLETFAPVSRHETIRLIL 558

Query: 550  SLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLS--CKILKSLYGLK*APR 383
             +A ++ W+L     KSAFLNG + EEIY + P  +E++       ++ K+LYGLK APR
Sbjct: 559  VVAAQRKWKLFQLDVKSAFLNGTLEEEIYAEQPLGFEEEGKEDHVLRLHKALYGLKQAPR 618

Query: 382  AWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVL-----LAFHVXXXXXXXXXXXXXXD 218
            AWY ++++F   + FT+S +D  L+     T+EVL     +  +V              +
Sbjct: 619  AWYSRIDEFFQRENFTRSDNDHALY-----TKEVLGKLLVVCIYVDDLIVTGDDEEMVEE 673

Query: 217  FKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGRKYPL 41
            FK  ++ EFE++DLG +  +LG+++ +S  G  L+QE YA KL++++N+ +S     PL
Sbjct: 674  FKTAMKNEFEMSDLGLLNYFLGMEIVQSLEGIFLSQECYARKLLKKFNMEDSKIMSTPL 732


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  230 bits (587), Expect = 2e-57
 Identities = 125/306 (40%), Positives = 184/306 (60%), Gaps = 3/306 (0%)
 Frame = -1

Query: 1881 FHKKLGHLNYKYLHIS-KQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GFRAKKFLE 1705
            +H+KLGH++ + + I  +Q L     K+S+P   CE C+  K H+L F T   R K  LE
Sbjct: 416  WHQKLGHMSDQGMKILVEQKLIPGLTKVSLPL--CEHCITSKQHRLKFSTSNSRGKVVLE 473

Query: 1704 LIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKSY 1525
            L+HSD+  + P  +     YF++FIDDYSR CWVY +K K DVF TF  F+  V+++   
Sbjct: 474  LVHSDVWQA-PVPSLGGAKYFVSFIDDYSRRCWVYPIKKKSDVFATFKAFKARVELDSGK 532

Query: 1524 KIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLHD 1345
            KI C R+D G EY S  F +FC+ +GIKRQ TV Y PQQNGV+ER NRTL+E  R +L  
Sbjct: 533  KIKCFRTDNGGEYTSEEFDDFCKKEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRA 592

Query: 1344 ANLDKTWWGEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLISKE 1165
            A L+K++W EA+ T  Y+ N  P+ A+ +K+P EM  G   + S+   FG + Y + + +
Sbjct: 593  AGLEKSFWAEAVNTACYLVNRAPSTAIELKTPMEMWTGKPVDYSNLHIFGSIVYAMYNAQ 652

Query: 1164 KWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNIIISREI--KEADTESYEYDKTIQQNA 991
            +  KLD K++K  F+ Y  G KGYRL +     ++ISR++   E   +  E D + ++  
Sbjct: 653  EITKLDPKSRKCRFLGYADGVKGYRLWDPTAHKVVISRDVIFVEDRLQRGEVDDSTEKEK 712

Query: 990  PKNKNL 973
            P+   +
Sbjct: 713  PETTQI 718



 Score =  158 bits (399), Expect = 1e-35
 Identities = 82/254 (32%), Positives = 144/254 (56%), Gaps = 8/254 (3%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            K N W L  LP+G++ +G +W++ +K   +  +++Y++R+VV+G++QKEGID+ + F P 
Sbjct: 809  KNNTWDLVPLPQGRKPIGNKWVFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPV 868

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQ--NNLSCKILK 413
             ++ T++ ++++       L     K+AFL+G++ EEIYM  P+ +ED+   NL C++ K
Sbjct: 869  VRLTTVRVVLAMCATFNLHLEQLDVKTAFLHGDLEEEIYMLQPEGFEDKENQNLVCRLNK 928

Query: 412  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFY--IG*NTREVLLAFHVXXXXXXXX 239
            SLYGLK APR WYK+ + F+   G+ +  +DP  ++   G     V+L  +V        
Sbjct: 929  SLYGLKQAPRCWYKRFDSFIMCLGYNRLNADPCAYFKRFG-KDNFVILLLYVDDMLVAGP 987

Query: 238  XXXXXXDFKRKLREEFEITDLGNVECYLGLQLH--KSNNGYVLNQEAYASKLIEEYNLTN 65
                  + K +L  EFE+ DLG     LG+Q+H  + N    L+Q+ Y  K++  +++ +
Sbjct: 988  NKDHIDELKAQLAREFEMKDLGPANKILGMQIHRDRGNRKIWLSQKNYLKKILSRFSMQD 1047

Query: 64   SNGRKYPLDSGAKL 23
                  PL    K+
Sbjct: 1048 CKSISTPLPINLKV 1061


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  230 bits (586), Expect = 3e-57
 Identities = 137/332 (41%), Positives = 192/332 (57%), Gaps = 6/332 (1%)
 Frame = -1

Query: 2022 LEPANN--VFSPNNTKN*HVIISQNNYQIKVLTFE-DIADYATNLVEIEKFHKKLGHLNY 1852
            L+  NN  V   N  KN + ++  N+     L  E DI+D          +HK++GHLNY
Sbjct: 368  LDRKNNRLVAKINMEKNINFLLRMNHPTQMALRSEIDISDL---------WHKRMGHLNY 418

Query: 1851 KYLHI--SKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*G-FRAKKFLELIHSDICG 1681
            + L +  +K  + G P  I++    CE CV GK  +  FP  G +RA   LEL+H+DI G
Sbjct: 419  RALKLLRTKGMVQGLPF-ITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHTDIVG 477

Query: 1680 SMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKSYKIGCLRSD 1501
             +P  +     YFITFIDDY+R  WVY LK K    + F KF+ +V+ + + KI  LRSD
Sbjct: 478  KVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSD 537

Query: 1500 GGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLHDANLDKTWW 1321
             G EY S  F+ +CEN GI+RQ+T  Y+ QQNGV+ER NRT+ +    +L D  + K++W
Sbjct: 538  QGGEYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFW 597

Query: 1320 GEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLISKEKWRKLDDK 1141
             EA+ T  YI N  P KA+  ++P E  YG KP I H   FG + Y  +  +K  K D+K
Sbjct: 598  AEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNK 657

Query: 1140 AKKGIFIEYPTGTKGYRLIEMETRNIIISREI 1045
            + + IF+ Y  G KGYRL  +E + IIISR++
Sbjct: 658  SDRCIFVGYADGIKGYRLYNLEKKKIIISRDV 689



 Score =  191 bits (486), Expect(2) = 4e-46
 Identities = 95/259 (36%), Positives = 159/259 (61%), Gaps = 8/259 (3%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            K N W L + P  +  +G +W+Y  KL P+GS+ KYK+R+V +GF QK GIDY +T+ P 
Sbjct: 734  KNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPV 793

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQ--NNLSCKILK 413
            A+++TI++II+LA +K W+++    KSAFLNG + EEIY++ P+ +  Q   N   ++ K
Sbjct: 794  ARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKK 853

Query: 412  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXX 233
            +LYGLK APRAWY +++ +   +GF KSIS+P L+     T  ++++ +V          
Sbjct: 854  ALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTGNSE 913

Query: 232  XXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGR 53
                DFK+ +   +E++DLG +  +LG+++H+S+ G  ++Q  YA  +++++ + N    
Sbjct: 914  KMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRKYAKNILKKFKMDNCKSV 973

Query: 52   KYPL----DSGAKLGEDEA 8
              PL       A+ G D+A
Sbjct: 974  TTPLLPNEKQKARYGADKA 992



 Score = 23.1 bits (48), Expect(2) = 4e-46
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 833 PKSPTEAIKKQHWKNAMDEEMTNMKK 756
           P+S  EA K  +W  AM++E+  ++K
Sbjct: 709 PQSFQEAEKHDNWIKAMEDEIHMIEK 734


>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
            [Cucumis sativus]
          Length = 1830

 Score =  229 bits (585), Expect = 4e-57
 Identities = 132/320 (41%), Positives = 189/320 (59%), Gaps = 2/320 (0%)
 Frame = -1

Query: 1941 KVLTFEDIADYATNLVEIEKFHKKLGHLNYKYL-HISKQNLDGSPNKISIPKQNCESCVI 1765
            K++ FE + +  + L     +H + GHL++  L H+ +Q++    + I    Q CE+CV 
Sbjct: 424  KLVCFETLVNDTSWL-----WHCRFGHLSFDTLSHMCQQHMVRGMSNIKKEDQLCEACVF 478

Query: 1764 GKHHKLPFPT*G-FRAKKFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKI 1588
            GKHH+  FPT G +RA K LEL+H+D+CG M   TH    YF+TFIDDYSR  W+YLLK 
Sbjct: 479  GKHHRNSFPTGGSWRASKPLELVHTDLCGPMRTTTHGGNRYFLTFIDDYSRKTWIYLLKE 538

Query: 1587 KKDVFQTFIKFRKLVQIEKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQ 1408
            K   F+ F  F+ +V+ E + K+  LRSD G EY  I+F +F +  GIK Q T+   PQQ
Sbjct: 539  KSATFECFKTFKAMVENESNLKLKSLRSDRGGEY--IVFADFLKENGIKHQKTLRRTPQQ 596

Query: 1407 NGVSER*NRTLVEAVRCLLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPTEMLYGV 1228
            NGV+ER NR ++E  R +L    L   +WG+A+    Y+ N    K++   +P E   G+
Sbjct: 597  NGVAERKNRIIMELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAWSGL 656

Query: 1227 KPNISHFMEFGKMYYYLISKEKWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNIIISRE 1048
            KP +SH   FG + Y  IS EK  KLDDK++K IF+ Y   +K YRL    ++ +IISR+
Sbjct: 657  KPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVGYSENSKAYRLYNPISKKVIISRD 716

Query: 1047 IKEADTESYEYDKTIQQNAP 988
            +K      ++  K  Q NAP
Sbjct: 717  VK------FDEAKLWQWNAP 730


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score =  229 bits (585), Expect = 4e-57
 Identities = 137/351 (39%), Positives = 198/351 (56%), Gaps = 6/351 (1%)
 Frame = -1

Query: 2022 LEPANN--VFSPNNTKN*HVIISQNNYQIKVLTFE-DIADYATNLVEIEKFHKKLGHLNY 1852
            L+  NN  V   N  KN + ++  N+     L  E DI+D          +HK++GHLNY
Sbjct: 424  LDRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSEVDISDL---------WHKRMGHLNY 474

Query: 1851 KYLHI--SKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*G-FRAKKFLELIHSDICG 1681
            + L +  +K  + G P  I++    CE CV GK  +  FP  G +RA    EL+H+DI G
Sbjct: 475  RALKLLRTKGMVQGLPF-ITLKSDPCEGCVFGKQIQASFPHSGAWRASAPFELVHTDIVG 533

Query: 1680 SMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKSYKIGCLRSD 1501
             +P  +     YFITFIDDY+R  WVY LK K    +TF KF+ +V+ + + KI  LRSD
Sbjct: 534  KVPTMSEGGNWYFITFIDDYTRMIWVYFLKEKSAALETFKKFKVMVENQSNRKIKVLRSD 593

Query: 1500 GGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLHDANLDKTWW 1321
             G EY S  F+ +CEN GI+RQ+T  Y+ QQNGV+ER NRT+ +    +L D  + K++W
Sbjct: 594  QGGEYISKEFEKYCENAGIRRQLTTGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFW 653

Query: 1320 GEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLISKEKWRKLDDK 1141
             EA+ T  YI N  P KA+  ++P E  YG KP I H   F  + Y  +  +K  K D+K
Sbjct: 654  AEAVNTAVYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFACICYAQVPAQKRVKFDNK 713

Query: 1140 AKKGIFIEYPTGTKGYRLIEMETRNIIISREIKEADTESYEYDKTIQQNAP 988
            + + IF+ Y  G KGYRL  +E + IIISR++   ++ ++ +      + P
Sbjct: 714  SNRCIFVGYADGIKGYRLYNLEKKKIIISRDVFFDESATWNWKSPEASSTP 764



 Score =  151 bits (382), Expect(2) = 4e-34
 Identities = 78/242 (32%), Positives = 133/242 (54%), Gaps = 2/242 (0%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            K N W   + P  +  +G +W+Y  KL P+GS+ KYK+R+V +GF QK GIDY +T+ P 
Sbjct: 878  KNNTWEFVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPV 937

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLSCKILKSL 407
            A+++TI++II+LA +K W+++    KSAFLNG + EEIY++ P+ +  Q   + K     
Sbjct: 938  ARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEWFSVQGGENKK----- 992

Query: 406  YGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXXXX 227
                                 GF KSIS+P L+     T  ++++ +V            
Sbjct: 993  ---------------------GFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTGNSDKM 1031

Query: 226  XXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGRKY 47
              DFK+ +   +E++DLG +  +LG+++H+S+ G  ++Q  YA  +++++ + N      
Sbjct: 1032 MQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTT 1091

Query: 46   PL 41
            PL
Sbjct: 1092 PL 1093



 Score = 23.1 bits (48), Expect(2) = 4e-34
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 833 PKSPTEAIKKQHWKNAMDEEMTNMKK 756
           P+S  EA K  +W  AM++E+  ++K
Sbjct: 853 PQSFQEAEKHDNWIKAMEDEIHMIEK 878


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  229 bits (585), Expect = 4e-57
 Identities = 137/331 (41%), Positives = 191/331 (57%), Gaps = 6/331 (1%)
 Frame = -1

Query: 2022 LEPANN--VFSPNNTKN*HVIISQNNYQIKVLTFE-DIADYATNLVEIEKFHKKLGHLNY 1852
            L+  NN  V   N  KN + ++  N+     L  E DI+D          +HK++GHLNY
Sbjct: 417  LDRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSEVDISDL---------WHKRMGHLNY 467

Query: 1851 KYLHI--SKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*G-FRAKKFLELIHSDICG 1681
            + L +  +K  + G P  I++    CE CV GK  +  FP  G +RA   LEL+H+DI G
Sbjct: 468  RALKLLRTKGMVQGLPF-ITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHADIVG 526

Query: 1680 SMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKSYKIGCLRSD 1501
             +P  +     YFITFIDDY+R  WVY LK K    + F KF+ +V+ + + KI  LRSD
Sbjct: 527  KVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSD 586

Query: 1500 GGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLHDANLDKTWW 1321
             G EY S  F+ +CEN GI+RQ+T  Y+ QQNGV+ER NRT+ +    +L D  + K++W
Sbjct: 587  QGREYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFW 646

Query: 1320 GEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLISKEKWRKLDDK 1141
             EA+ T  YI N  P KA+  ++P E  YG KP I H   FG + Y  +  +K  K D+K
Sbjct: 647  AEAVNTAVYILNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNK 706

Query: 1140 AKKGIFIEYPTGTKGYRLIEMETRNIIISRE 1048
            + + IF+ Y  G KGYRL  +E + IIISR+
Sbjct: 707  SDRCIFVGYADGIKGYRLYNLEKKKIIISRD 737



 Score =  190 bits (483), Expect(2) = 9e-46
 Identities = 91/244 (37%), Positives = 153/244 (62%), Gaps = 4/244 (1%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            K N W L + P  +  +G +W+Y  KL P+GS+ KYK+R+V +GF QK GIDY +T+ P 
Sbjct: 871  KNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPV 930

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQ--NNLSCKILK 413
            A+++TI++II+LA +K W+++    KSAFLNG + EEIY++ P+ +  Q   N   ++ K
Sbjct: 931  ARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKK 990

Query: 412  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXX 233
            +LYGLK APRAWY +++ +   +GF KSIS+P L+     T  ++++ +V          
Sbjct: 991  ALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTGNSE 1050

Query: 232  XXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGR 53
                DFK+ +   +E++DLG +  +LG+++H+S+ G  ++Q  YA  +++++ + N    
Sbjct: 1051 KMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSV 1110

Query: 52   KYPL 41
              PL
Sbjct: 1111 TTPL 1114



 Score = 23.1 bits (48), Expect(2) = 9e-46
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 833 PKSPTEAIKKQHWKNAMDEEMTNMKK 756
           P+S  EA K  +W  AM++E+  ++K
Sbjct: 846 PQSFQEAEKHDNWIKAMEDEIHMIEK 871


>ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669657 [Glycine max]
          Length = 711

 Score =  229 bits (584), Expect = 5e-57
 Identities = 120/280 (42%), Positives = 173/280 (61%), Gaps = 1/280 (0%)
 Frame = -1

Query: 1851 KYLHISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GF-RAKKFLELIHSDICGSM 1675
            K L   K+ + G P+ I+ P Q CE C+IGK  +  FP     RA K LELIH+D+CG +
Sbjct: 353  KELLAKKEMVRGLPS-INHPDQLCEGCLIGKQFRKSFPKESTTRATKPLELIHTDVCGPI 411

Query: 1674 PYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKSYKIGCLRSDGG 1495
               +     YF+ FIDDYSR  WVY LK K +VF+ F KF+ LV+ E    I  +RSD G
Sbjct: 412  KPNSFGKNKYFLLFIDDYSRKTWVYFLKEKSEVFENFKKFKALVEKESGLSIKAMRSDRG 471

Query: 1494 TEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLHDANLDKTWWGE 1315
             E+ S  F  +CE+ GI+R +TVP +PQQNGV+ER NRT++  VR +L    + K +W E
Sbjct: 472  GEFTSNKFNKYCEDHGIRRPLTVPRSPQQNGVAERKNRTILNMVRSMLKSKKMPKEFWAE 531

Query: 1314 ALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLISKEKWRKLDDKAK 1135
            A+    Y+TN  P +++H K+P E   G KP ISH   FG + Y  +  EK  KLDDK++
Sbjct: 532  AVACAVYLTNRSPTRSVHEKTPQEAWSGRKPGISHLKVFGSIAYTHVPDEKRTKLDDKSE 591

Query: 1134 KGIFIEYPTGTKGYRLIEMETRNIIISREIKEADTESYEY 1015
            K +F+ Y + +KGY+L    +R I+ISR+++  + + +++
Sbjct: 592  KYVFVGYDSRSKGYKLYNPNSRKIVISRDVEFDEEDCWDW 631


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
            gi|31429795|gb|AAP51797.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1350

 Score =  228 bits (582), Expect = 9e-57
 Identities = 138/351 (39%), Positives = 198/351 (56%), Gaps = 6/351 (1%)
 Frame = -1

Query: 2022 LEPANN--VFSPNNTKN*HVIISQNNYQIKVLTFE-DIADYATNLVEIEKFHKKLGHLNY 1852
            L+  NN  V   N  KN + ++  N+     L  E DI+D          +HK++GHLNY
Sbjct: 340  LDRKNNRLVAKINMEKNRNFLLRMNHPTQMALRSEIDISDL---------WHKRMGHLNY 390

Query: 1851 KYLHI--SKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*G-FRAKKFLELIHSDICG 1681
            + L +  +K  + G P  I++    CE CV GK  +  FP  G +RA   LEL+H+DI G
Sbjct: 391  RALKLLRTKGMVQGLPF-ITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHTDIVG 449

Query: 1680 SMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKSYKIGCLRSD 1501
             +P  +     YFITFIDDY+R  WVY LK K    + F KF+ +V+ + + KI  LRSD
Sbjct: 450  KVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSD 509

Query: 1500 GGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLHDANLDKTWW 1321
             G EY S  F+ +CEN GI+RQ+T  Y+ QQNGV+ER NRT+ +    +L D  + K++W
Sbjct: 510  QGGEYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFW 569

Query: 1320 GEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLISKEKWRKLDDK 1141
             EA+ T  YI N  P KA+  ++P E  YG KP I H   FG + Y  +  +K  K D+K
Sbjct: 570  AEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNK 629

Query: 1140 AKKGIFIEYPTGTKGYRLIEMETRNIIISREIKEADTESYEYDKTIQQNAP 988
            +   IF+ Y  G KGYRL  +E + IIISR++   ++ ++ +      + P
Sbjct: 630  SDWCIFVGYADGIKGYRLYNLEKKKIIISRDVIFDESATWNWKSPEASSTP 680



 Score =  181 bits (458), Expect(2) = 7e-43
 Identities = 89/244 (36%), Positives = 150/244 (61%), Gaps = 4/244 (1%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            K N W L + P  ++ +G +W+Y  KL P+GS+ KYK+R+V +GF QK GIDY +T+ P 
Sbjct: 794  KNNTWELVDRPRDRKVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPV 853

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQ--NNLSCKILK 413
            A+++TI++II+LA +K W+++    KSAFLNG + EEIY++ P+ +  Q   N   ++ K
Sbjct: 854  ARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKK 913

Query: 412  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXX 233
            +LYGLK APRAWY +++ +   +GF KSIS          T  ++++ +V          
Sbjct: 914  ALYGLKQAPRAWYSQIDQYFIQKGFAKSIS----------TDILIVSLYVDDLIYTANSE 963

Query: 232  XXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGR 53
                DFK+ +   +E++DLG +  +LG+++H+S+ G  ++Q  YA  +++++ + N    
Sbjct: 964  KMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNYKSV 1023

Query: 52   KYPL 41
              PL
Sbjct: 1024 TTPL 1027



 Score = 23.1 bits (48), Expect(2) = 7e-43
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 833 PKSPTEAIKKQHWKNAMDEEMTNMKK 756
           P+S  EA K  +W  AM++E+  ++K
Sbjct: 769 PQSFQEAEKHDNWIKAMEDEIHMIEK 794


>ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665857 [Glycine max]
          Length = 678

 Score =  228 bits (581), Expect = 1e-56
 Identities = 120/291 (41%), Positives = 178/291 (61%), Gaps = 2/291 (0%)
 Frame = -1

Query: 1881 FHKKLGHLNYKYLH-ISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GF-RAKKFL 1708
            +H + GHLN+  L  ++K+ +      I+ P Q CE C+IGK  +  FP     RA K L
Sbjct: 385  WHLRFGHLNFDGLERLAKKEMVRDLPSINHPDQLCERCLIGKQFRKSFPKESTTRATKPL 444

Query: 1707 ELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKS 1528
            ELIH+D+CG +   +     YF+ FIDDYSR  WVY LK K +VF+ F KF+ LV+ E  
Sbjct: 445  ELIHTDVCGPIKPNSFGKNKYFLLFIDDYSRKTWVYFLKEKSEVFENFKKFKALVEKESG 504

Query: 1527 YKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLH 1348
              I  +RSD G E+ S  F  +CE+ GI+R +TVP +PQQNGV+ER NRT++  VR +L 
Sbjct: 505  LSIKAMRSDRGGEFTSNKFNKYCEDHGIRRPLTVPRSPQQNGVAERKNRTILNMVRSMLK 564

Query: 1347 DANLDKTWWGEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLISK 1168
               + K +W +A+    Y+TN    +++H K+P E   G KP ISH   FG + Y  +  
Sbjct: 565  SKKMLKEFWAKAVACAVYLTNCSLTRSVHEKTPQEAWSGRKPGISHLKVFGSIAYTHVPD 624

Query: 1167 EKWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNIIISREIKEADTESYEY 1015
            EK  KLDDK++K +F+ Y + +KGY+L    +R I+ISR+++  + + +++
Sbjct: 625  EKRTKLDDKSEKYVFVGYDSRSKGYKLYNPNSRKIVISRDVEFDEEDCWDW 675


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  227 bits (579), Expect = 2e-56
 Identities = 125/282 (44%), Positives = 172/282 (60%), Gaps = 3/282 (1%)
 Frame = -1

Query: 1881 FHKKLGHLNYKYLHI--SKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GF-RAKKF 1711
            +H + GHLN+  L +   K+ + G P  I+ P Q CE C++GK  K+ FP     RA+K 
Sbjct: 468  WHLRFGHLNFGGLELLSRKEMVRGLPC-INHPNQVCEGCLLGKQFKMSFPKESSSRAQKP 526

Query: 1710 LELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEK 1531
            LELIH+D+CG +  K+     YF+ FIDD+SR  WVY LK K +VF+ F KF+  V+ E 
Sbjct: 527  LELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKES 586

Query: 1530 SYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLL 1351
               I  +RSD G E+ S  F  +CE+ GI+RQ+TVP +PQQNGV+ER NRT++E  R +L
Sbjct: 587  GLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSML 646

Query: 1350 HDANLDKTWWGEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLIS 1171
                L K  W EA+    Y+ N  P K++  K+P E   G KP +SH   FG + +  + 
Sbjct: 647  KSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVP 706

Query: 1170 KEKWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNIIISREI 1045
             EK  KLDDK++K IFI Y   +KGY+L   +T+  IISR I
Sbjct: 707  DEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNI 748



 Score =  181 bits (458), Expect(2) = 1e-45
 Identities = 87/255 (34%), Positives = 157/255 (61%), Gaps = 5/255 (1%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            K + W L  LP G + +G +W+Y  K    G +++YK+R+V +G+SQ+ GIDY + F P 
Sbjct: 831  KNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPV 890

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCY--EDQNNLSCKILK 413
            A+++T++ IISLA +  W++H    KSAFLNG++ EE+Y++ P+ Y  + + +   ++ K
Sbjct: 891  ARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKK 950

Query: 412  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLA-FHVXXXXXXXXX 236
            +LYGLK APRAW  +++ +   + F K   + +  YI     ++L+A  +V         
Sbjct: 951  ALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKEDILIACLYVDDLIFTGNN 1009

Query: 235  XXXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNG 56
                 +FK+++ +EFE+TD+G +  YLG+++ + +NG  + QE YA ++++++ + +SN 
Sbjct: 1010 PSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 1069

Query: 55   RKYPLDSGAKLGEDE 11
               P++ G KL + E
Sbjct: 1070 VCTPMECGIKLSKKE 1084



 Score = 32.3 bits (72), Expect(2) = 1e-45
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -2

Query: 857 CFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 756
           C P+D        EAI+K+ W+NAMDEE+ +++K
Sbjct: 804 CEPMDFQ------EAIEKKTWRNAMDEEIKSIQK 831


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  226 bits (577), Expect = 3e-56
 Identities = 124/282 (43%), Positives = 171/282 (60%), Gaps = 3/282 (1%)
 Frame = -1

Query: 1881 FHKKLGHLNYKYLHI--SKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GF-RAKKF 1711
            +H + GHLN+  L +   K+ + G P  I+ P Q CE C++G   K+ FP     RA+K 
Sbjct: 468  WHLRFGHLNFGGLELLSRKEMVRGLPC-INHPNQVCEGCLLGNQFKMSFPKESSSRAQKP 526

Query: 1710 LELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEK 1531
            LELIH+D+CG +  K+     YF+ FIDD+SR  WVY LK K +VF+ F KF+  V+ E 
Sbjct: 527  LELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKES 586

Query: 1530 SYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLL 1351
               I  +RSD G E+ S  F  +CE+ GI+RQ+TVP +PQQNGV+ER NRT++E  R +L
Sbjct: 587  GLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSML 646

Query: 1350 HDANLDKTWWGEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLIS 1171
                L K  W EA+    Y+ N  P K++  K+P E   G KP +SH   FG + +  + 
Sbjct: 647  KSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVP 706

Query: 1170 KEKWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNIIISREI 1045
             EK  KLDDK++K IFI Y   +KGY+L   +T+  IISR I
Sbjct: 707  DEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNI 748



 Score =  172 bits (435), Expect(2) = 5e-43
 Identities = 82/239 (34%), Positives = 148/239 (61%), Gaps = 5/239 (2%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            K + W L  LP G + +G +W+Y  K    G +++YK+R+V +G+SQ+ GIDY + F P 
Sbjct: 863  KNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPV 922

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCY--EDQNNLSCKILK 413
            A+++T++ IISLA +  W++H    KSAFLNG++ EE+Y++ P+ Y  + + +   ++ K
Sbjct: 923  ARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKK 982

Query: 412  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLA-FHVXXXXXXXXX 236
             LYGLK APRAW  +++ +   + F K   + +  YI     ++L+A  +V         
Sbjct: 983  VLYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKEDILIACLYVDDLIFTGNN 1041

Query: 235  XXXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSN 59
                 +FK+++ +EFE+TD+G +  YLG+++ + +NG  + QE YA ++++++ + +SN
Sbjct: 1042 PSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSN 1100



 Score = 32.3 bits (72), Expect(2) = 5e-43
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -2

Query: 857 CFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 756
           C P+D        EAI+K+ W+NAMDEE+ +++K
Sbjct: 836 CEPMDFQ------EAIEKKTWRNAMDEEIKSIQK 863


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  226 bits (576), Expect = 4e-56
 Identities = 125/282 (44%), Positives = 171/282 (60%), Gaps = 3/282 (1%)
 Frame = -1

Query: 1881 FHKKLGHLNYKYLHI--SKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GF-RAKKF 1711
            +H + GHLN+  L +   K+ + G P  I+ P Q CE C++GK  K+ FP     RA+K 
Sbjct: 468  WHLRFGHLNFGGLELLSRKEMVRGLPC-INHPNQVCEGCLLGKQFKMSFPKESSSRAQKP 526

Query: 1710 LELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEK 1531
            LELIH+D+CG +  K+     YF+ FIDD+SR  WVY LK K +VF+ F KF+  V+ E 
Sbjct: 527  LELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKES 586

Query: 1530 SYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLL 1351
               I  +RSD G E+ S  F  +CE+ GI+RQ+TVP +PQQNGV ER NRT++E  R +L
Sbjct: 587  GLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSML 646

Query: 1350 HDANLDKTWWGEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLIS 1171
                L K  W EA+    Y+ N  P K++  K+P E   G KP +SH   FG + +  + 
Sbjct: 647  KSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVP 706

Query: 1170 KEKWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNIIISREI 1045
             EK  KLDDK++K IFI Y   +KGY+L   +T+  IISR I
Sbjct: 707  DEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNI 748



 Score =  179 bits (454), Expect(2) = 1e-44
 Identities = 87/255 (34%), Positives = 156/255 (61%), Gaps = 5/255 (1%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            K + W L  LP G + +G +W+Y  K    G +++YK+R+V +G+SQ+ GIDY + F P 
Sbjct: 863  KNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPV 922

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCY--EDQNNLSCKILK 413
            A+++T++ IISLA +  W++H    KSAFLNG++ EE+Y++ P+ Y  + + +   ++ K
Sbjct: 923  ARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKK 982

Query: 412  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLA-FHVXXXXXXXXX 236
             LYGLK APRAW  +++ +   + F K   + +  YI     ++L+A  +V         
Sbjct: 983  VLYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKEDILIACLYVDDLIFTGNN 1041

Query: 235  XXXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNG 56
                 +FK+++ +EFE+TD+G +  YLG+++ + +NG  + QE YA ++++++ + +SN 
Sbjct: 1042 PSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNP 1101

Query: 55   RKYPLDSGAKLGEDE 11
               P++ G KL + E
Sbjct: 1102 VCTPMECGIKLSKKE 1116



 Score = 30.8 bits (68), Expect(2) = 1e-44
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -2

Query: 857 CFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 756
           C P+D        +AI+K+ W+NAMDEE+ +++K
Sbjct: 836 CEPMDFQ------KAIEKKTWRNAMDEEIKSIQK 863


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  226 bits (576), Expect = 4e-56
 Identities = 125/282 (44%), Positives = 171/282 (60%), Gaps = 3/282 (1%)
 Frame = -1

Query: 1881 FHKKLGHLNYKYLHI--SKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GF-RAKKF 1711
            +H + GHLN+  L +   K+ + G P  I+ P Q CE C++GK  K+ FP     RA+K 
Sbjct: 468  WHLRFGHLNFGGLELLSRKEMVRGLPC-INHPNQVCEGCLLGKQFKMSFPKESSSRAQKP 526

Query: 1710 LELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEK 1531
            LELIH+D+CG +  K+     YF+ FIDD+SR  WVY LK K +VF+ F KF+  V+ E 
Sbjct: 527  LELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKES 586

Query: 1530 SYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLL 1351
               I  +RSD G E+ S  F  +CE+ GI+RQ+TVP +PQQNGV ER NRT++E  R +L
Sbjct: 587  GLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSML 646

Query: 1350 HDANLDKTWWGEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLIS 1171
                L K  W EA+    Y+ N  P K++  K+P E   G KP +SH   FG + +  + 
Sbjct: 647  KSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVP 706

Query: 1170 KEKWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNIIISREI 1045
             EK  KLDDK++K IFI Y   +KGY+L   +T+  IISR I
Sbjct: 707  DEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNI 748



 Score =  179 bits (454), Expect(2) = 1e-44
 Identities = 87/255 (34%), Positives = 156/255 (61%), Gaps = 5/255 (1%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            K + W L  LP G + +G +W+Y  K    G +++YK+R+V +G+SQ+ GIDY + F P 
Sbjct: 863  KNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPV 922

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCY--EDQNNLSCKILK 413
            A+++T++ IISLA +  W++H    KSAFLNG++ EE+Y++ P+ Y  + + +   ++ K
Sbjct: 923  ARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKK 982

Query: 412  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLA-FHVXXXXXXXXX 236
             LYGLK APRAW  +++ +   + F K   + +  YI     ++L+A  +V         
Sbjct: 983  VLYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKEDILIACLYVDDLIFTGNN 1041

Query: 235  XXXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNG 56
                 +FK+++ +EFE+TD+G +  YLG+++ + +NG  + QE YA ++++++ + +SN 
Sbjct: 1042 PSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 1101

Query: 55   RKYPLDSGAKLGEDE 11
               P++ G KL + E
Sbjct: 1102 VCTPMECGIKLSKKE 1116



 Score = 30.8 bits (68), Expect(2) = 1e-44
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -2

Query: 857 CFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 756
           C P+D        +AI+K+ W+NAMDEE+ +++K
Sbjct: 836 CEPMDFQ------KAIEKKTWRNAMDEEIKSIQK 863


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  225 bits (573), Expect = 1e-55
 Identities = 124/282 (43%), Positives = 171/282 (60%), Gaps = 3/282 (1%)
 Frame = -1

Query: 1881 FHKKLGHLNYKYLHI--SKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GF-RAKKF 1711
            +H + GHLN+  L +   K+ + G P  I+ P Q CE C++GK  K+ FP     RA+K 
Sbjct: 468  WHLRFGHLNFGGLELLSRKEMVRGLPC-INHPNQVCEGCLLGKQFKMSFPKESSSRAQKS 526

Query: 1710 LELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEK 1531
            LELIH+D+CG +  K+     YF+ FIDD+SR  WVY LK K +VF+ F KF+  V+ E 
Sbjct: 527  LELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKES 586

Query: 1530 SYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLL 1351
               I  +RSD G E+ S  F  +CE+ GI+RQ+TVP +PQQNGV+ER NRT++E  R +L
Sbjct: 587  GLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSML 646

Query: 1350 HDANLDKTWWGEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLIS 1171
                L K  W EA+    Y+ N  P K++  K+P E   G K  +SH   FG + +  + 
Sbjct: 647  KSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVP 706

Query: 1170 KEKWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNIIISREI 1045
             EK  KLDDK++K IFI Y   +KGY+L   +T+  IISR I
Sbjct: 707  DEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNI 748



 Score =  178 bits (452), Expect(2) = 6e-45
 Identities = 86/255 (33%), Positives = 156/255 (61%), Gaps = 5/255 (1%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            K + W L  LP G + +G +W+Y  K    G +++YK+R+V +G+ Q+ GIDY + F P 
Sbjct: 863  KNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPV 922

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCY--EDQNNLSCKILK 413
            A+++T++ IISLA +  W++H    KSAFLNG++ EE+Y++ P+ Y  + + +   ++ K
Sbjct: 923  ARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKK 982

Query: 412  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLA-FHVXXXXXXXXX 236
            +LYGLK APRAW  +++ +   + F K   + +  YI     ++L+A  +V         
Sbjct: 983  ALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKEDILIACLYVDDLIFTGNN 1041

Query: 235  XXXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNG 56
                 +FK+++ +EFE+TD+G +  YLG+++ + +NG  + QE YA ++++++ + +SN 
Sbjct: 1042 PSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 1101

Query: 55   RKYPLDSGAKLGEDE 11
               P++ G KL + E
Sbjct: 1102 VCTPMECGIKLSKKE 1116



 Score = 32.3 bits (72), Expect(2) = 6e-45
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -2

Query: 857 CFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 756
           C P+D        EAI+K+ W+NAMDEE+ +++K
Sbjct: 836 CEPMDFQ------EAIEKKTWRNAMDEEIKSIQK 863


>gb|ABR16307.1| unknown [Picea sitchensis]
          Length = 407

 Score =  223 bits (569), Expect = 3e-55
 Identities = 123/282 (43%), Positives = 169/282 (59%), Gaps = 3/282 (1%)
 Frame = -1

Query: 1881 FHKKLGHLNYKYLHISK--QNLDGSPNKISIPKQNCESCVIGKHHKLPF-PT*GFRAKKF 1711
            +H+++GHLNYK L + K  + + G P KIS  +  CE C+ GK H   F     +RAK  
Sbjct: 75   WHERMGHLNYKSLSLMKRFEMVYGLP-KISQSQGVCEGCMSGKQHMEKFIKGKSWRAKTP 133

Query: 1710 LELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEK 1531
            L L+HSD+ G + + +     Y +TFIDDYSR  WVY LK K +VF+ F +F+  V+ + 
Sbjct: 134  LHLVHSDLMGPLEHPSISGSRYVLTFIDDYSRRIWVYFLKNKDEVFEKFKEFKAFVEKQS 193

Query: 1530 SYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLL 1351
               I  LR+D G EY +  F ++C+  GIKR+ TVPY PQQNGV+ER NRTL+E  RC+L
Sbjct: 194  GKSIKILRTDNGKEYVNKEFDHYCKYNGIKREHTVPYTPQQNGVAERKNRTLMEMARCML 253

Query: 1350 HDANLDKTWWGEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYYLIS 1171
            H  N+D  +W EA+ T  YI N  P  A+  K+P E     KP +SHF  FG   Y  I 
Sbjct: 254  HARNMDPKFWAEAINTATYIVNRTPTIAVKHKTPEEAWSRRKPTVSHFKVFGCDVYVHIP 313

Query: 1170 KEKWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNIIISREI 1045
             EK +KLD K+ K I + Y   +K YR+ + E   I+I R++
Sbjct: 314  DEKRKKLDRKSHKCIMVGYSETSKAYRVYDPEKNEILIRRDV 355


>gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
          Length = 1318

 Score =  223 bits (568), Expect = 4e-55
 Identities = 118/285 (41%), Positives = 176/285 (61%), Gaps = 2/285 (0%)
 Frame = -1

Query: 1893 EIEKFHKKLGHLNYKYL-HISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*G-FRA 1720
            E   +H++LGH+NY+++ ++   NL      I+  ++ CE C+ GK  + PFP     R 
Sbjct: 455  EARLWHRRLGHINYQFIKNMGSLNLVNDMPIITEVEKTCEVCLQGKQSRHPFPKQSQTRT 514

Query: 1719 KKFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQ 1540
               L+LIH+DICG +   +     YFI FIDD+SR+CW++ LK K +  Q F+KF+ LV+
Sbjct: 515  ANRLQLIHTDICGPIGTLSLNGNKYFILFIDDFSRFCWIFFLKQKSEAIQYFMKFKVLVE 574

Query: 1539 IEKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVR 1360
             +   KI  LRSD G+EY S  FK     +GIK+ +TVPY+PQQNGVSER NRT++E +R
Sbjct: 575  KQTDQKIKALRSDNGSEYTSNEFKALLTQEGIKQFLTVPYSPQQNGVSERKNRTIMEMIR 634

Query: 1359 CLLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPTEMLYGVKPNISHFMEFGKMYYY 1180
            CLL +  + K +W EA      + N  P  AL+  +P E+ +G KP+IS+   FG + Y 
Sbjct: 635  CLLFEQQMPKYFWAEAANFAVTLQNLIPTTALNSMTPFEVWHGYKPSISNVKVFGCIAYA 694

Query: 1179 LISKEKWRKLDDKAKKGIFIEYPTGTKGYRLIEMETRNIIISREI 1045
             + ++K  KLD K +  I + Y + +KGYRL  +ET+ + ISR++
Sbjct: 695  QVPQQKRTKLDSKTQISINLGYSSVSKGYRLFNVETKKVFISRDV 739



 Score =  176 bits (446), Expect(2) = 2e-42
 Identities = 87/257 (33%), Positives = 159/257 (61%), Gaps = 5/257 (1%)
 Frame = -3

Query: 760  KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 581
            +   W L + P+ +R +  +W++  KL  +GS++K K+R+VV+GFSQ  G+D+ +TF P 
Sbjct: 831  RNQTWILVDRPKHQRVISVKWIFRTKLNSDGSINKLKARLVVRGFSQVHGVDFFETFAPV 890

Query: 580  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCY--EDQNNLSCKILK 413
            A+  TI+ +++LA ++ W + H   KSAFLNG I+E+IY++ P+ +  + + +  CK++K
Sbjct: 891  ARHDTIRLLVALAGREKWRIWHMDVKSAFLNGTISEDIYVEQPEGFVEKGKEDKVCKLIK 950

Query: 412  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFY-IG*NTREVLLAFHVXXXXXXXXX 236
            +LYGLK APRAWYKK++ +L S  F  S S+P L+        +++++ +V         
Sbjct: 951  ALYGLKQAPRAWYKKIDAYLRSNKFFCSESEPTLYVKSSLGKIQLIVSVYVDDLLITGPN 1010

Query: 235  XXXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNG 56
                  F+ K++ EF+++DLG +  +LGL++ + ++   L+Q+ YA +L++ + +     
Sbjct: 1011 KSDLNSFRNKMKSEFDMSDLGEMSYFLGLEIQQRSDFICLHQKKYAGELLKRFKMEGCKP 1070

Query: 55   RKYPLDSGAKLGEDEAA 5
               PL +G KL +D+ +
Sbjct: 1071 VSTPLTTGTKLCKDDGS 1087



 Score = 26.6 bits (57), Expect(2) = 2e-42
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 833 PKSPTEAIKKQHWKNAMDEEMTNMKK 756
           P S  EA   + WK AM+ EMT +K+
Sbjct: 806 PCSYIEAASDEQWKLAMEAEMTMIKR 831