BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00015549
         (982 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237182.1| PREDICTED: pentatricopeptide repeat-containi...   107   7e-21
ref|XP_002521865.1| pentatricopeptide repeat-containing protein,...   103   1e-19
ref|XP_006470889.1| PREDICTED: pentatricopeptide repeat-containi...    99   2e-18
ref|XP_006420692.1| hypothetical protein CICLE_v10004581mg [Citr...    99   2e-18
gb|EOY32747.1| Pentatricopeptide repeat superfamily protein, put...    99   3e-18
ref|XP_001783392.1| predicted protein [Physcomitrella patens] gi...    94   6e-17
ref|XP_006386713.1| hypothetical protein POPTR_0002s19470g [Popu...    93   1e-16
ref|XP_002301519.2| hypothetical protein POPTR_0002s19470g [Popu...    93   1e-16
gb|EXB28566.1| hypothetical protein L484_009725 [Morus notabilis]      91   5e-16
ref|XP_002526170.1| pentatricopeptide repeat-containing protein,...    91   5e-16
emb|CBI27495.3| unnamed protein product [Vitis vinifera]               91   7e-16
emb|CBI36966.3| unnamed protein product [Vitis vinifera]               90   2e-15
ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-15
emb|CBI24106.3| unnamed protein product [Vitis vinifera]               89   2e-15
ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-15
gb|EMT04238.1| hypothetical protein F775_13122 [Aegilops tauschii]     88   4e-15
ref|XP_004298632.1| PREDICTED: pentatricopeptide repeat-containi...    88   4e-15
ref|XP_002515260.1| pentatricopeptide repeat-containing protein,...    88   4e-15
ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi...    88   6e-15
ref|XP_004305365.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-14

>ref|XP_004237182.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Solanum lycopersicum]
          Length = 625

 Score =  107 bits (267), Expect = 7e-21
 Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 9/218 (4%)
 Frame = -2

Query: 633 LVKDIEV-EVSKSKYENEKMLLDLQ----ALVVLVNSYVDSRKWSFLQKLAKDPRVPLLS 469
           L+KD +  E+    YE  K   D +     L +L+   V+S KW  +  L+KD R   + 
Sbjct: 110 LLKDTQTQEIGYDYYEKAKGEKDFRPEKSTLKLLIRYLVNSSKWGSVFSLSKDLRTLKVL 169

Query: 468 KKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEV 289
               T  +++ + +KSRKF++V ++LE   +V  E  V  +++ MR Y KL MY  ++ +
Sbjct: 170 PDSSTCCRLISSCMKSRKFKIVNSFLELFIVVDQEISVLAFDSAMRGYNKLHMYSSTVVL 229

Query: 288 FRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVE---PNLV-AYGILID 121
           +  + S  LVLD   YC +M  + K       +  FEE   K VE   P  V  Y  L +
Sbjct: 230 YEKMKSARLVLDPGCYCSIMEAHSKMGNSDKVVSFFEEFESKRVESTTPQYVQVYKCLCE 289

Query: 120 ALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFS 7
           +LGK G+  +AL   R+M K+GI+ D   Y+ +I  F+
Sbjct: 290 SLGKSGRAYEALEYFRDMTKKGIQEDHSFYSIVICGFA 327



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
 Frame = -2

Query: 630 VKDIEV-EVSKSKYENEKMLLDLQALVVLVNSYVDSRKWS-FLQKLAKDPRVPLLSKKLG 457
           ++D+++ E    + E +KML D    + LV  Y++       L  +A   RV +      
Sbjct: 329 IRDVKMAEELLEEAEGKKMLRDPALFLKLVLMYIEEGCMEKTLDVVATMTRVKIRVSDC- 387

Query: 456 TVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTV 277
               I++   + R  R      E L   G E     Y +++  Y +LG+Y  +  VF  +
Sbjct: 388 IFCAIVNGFSRKRGLRSAVQVYEDLTSQGCEPGQVTYASVLNLYCRLGLYSNAEMVFSEM 447

Query: 276 DSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKP 97
           + KG    + +Y  +++ Y K       +++   M  +G +PN+  Y  L+D  GK    
Sbjct: 448 EQKGFDKCVVAYSSMIAMYGKTGRPKDAMKLVAIMKERGCQPNVWVYNALLDIHGKVLNL 507

Query: 96  RDALRVAREMQKQGIEADEIVYNSLIHAFSIA 1
           R   ++ +EM+++ I  D + Y S+I A+S A
Sbjct: 508 RQVEKIWKEMKRRKIFPDRVSYTSIISAYSKA 539


>ref|XP_002521865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538903|gb|EEF40501.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 449

 Score =  103 bits (256), Expect = 1e-19
 Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
 Frame = -2

Query: 612 EVSKSKYENEKMLLDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHN 433
           E  K   E ++   D   L +L+   + S+ W  +  +A D     +     T S+++++
Sbjct: 108 EYYKKATERQEFRPDKPMLKLLIRYLMQSKNWDLILPVADDFNKYNVLPDSNTCSRLVYS 167

Query: 432 SVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLD 253
            +K+RKFR+VE+ LE  +   +E  V  +++ MR Y KL MY  +I V+  + + G+ +D
Sbjct: 168 CIKTRKFRIVESLLECFKCY-SEIPVLAFDSAMRGYNKLHMYSSTISVYEKMKAAGIFMD 226

Query: 252 IESYCILMSCYKKRREWGMTI------------------RVFEEMVGKGVEPNLVAYGIL 127
              YC +M  Y+K    G                      VF EM GKG +  +VAY  +
Sbjct: 227 SGGYCHIMKAYQKIGNTGKVTYASIINAYCRTGLYSKAEMVFLEMQGKGFDKCVVAYSSI 286

Query: 126 IDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLI 19
           +   GK G+ RDA+R+  +M+ +G E +  +YNSL+
Sbjct: 287 VAMYGKTGRTRDAMRLVAKMKVKGCEPNVWIYNSLL 322



 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 36/131 (27%), Positives = 71/131 (54%)
 Frame = -2

Query: 393 LEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKK 214
           ++  + +GN   V+ Y +++ AY + G+Y K+  VF  +  KG    + +Y  +++ Y K
Sbjct: 234 MKAYQKIGNTGKVT-YASIINAYCRTGLYSKAEMVFLEMQGKGFDKCVVAYSSIVAMYGK 292

Query: 213 RREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIV 34
                  +R+  +M  KG EPN+  Y  L+D  G+    R   ++ +EM+++ +  D++ 
Sbjct: 293 TGRTRDAMRLVAKMKVKGCEPNVWIYNSLLDMHGRVKNLRQVEKLWKEMKRRKVAPDKVT 352

Query: 33  YNSLIHAFSIA 1
           Y S+I A++ A
Sbjct: 353 YTSVIAAYNKA 363


>ref|XP_006470889.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Citrus sinensis]
          Length = 603

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 74/259 (28%), Positives = 129/259 (49%), Gaps = 13/259 (5%)
 Frame = -2

Query: 744 INNKSFFISCHVHVATI-----CRHQDKVCNINGKSQSHSLELVKDIEVEVSKSKYENEK 580
           IN++ F ++   +  TI       HQ  V +   K  S    ++KD + +     Y NE 
Sbjct: 49  INHRFFQVNASTNFPTIELNRDSHHQTAVPDAK-KFDSFLHGMLKDPQTQELAYDYYNEA 107

Query: 579 MLL-----DLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRK 415
             L     +   L +L+   V S+KW  +  L++D ++  +     T S+++ + V++RK
Sbjct: 108 KKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARK 167

Query: 414 FRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCI 235
           F++    L+ + I   E  +  +N+ M  Y KL MY  +I V+  + S G+VLD   YC 
Sbjct: 168 FKIANTLLQ-VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQ 226

Query: 234 LMSCYKKRREWGMTIRVFEEMVGKGVEPNLVA---YGILIDALGKQGKPRDALRVAREMQ 64
           +M  Y K  +      +F E   + ++    +   Y IL D+LGK G+  +AL+  R+M+
Sbjct: 227 IMEAYYKIGDSEKVAALFLECESRELDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286

Query: 63  KQGIEADEIVYNSLIHAFS 7
           ++GI  D  +Y SLI +F+
Sbjct: 287 EKGILEDPSIYASLICSFA 305



 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 32/116 (27%), Positives = 65/116 (56%)
 Frame = -2

Query: 348 YNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMV 169
           Y +++ AY ++G+Y K+ +VF  +  KG    + +Y  +++ Y K       +R+  +M 
Sbjct: 402 YASIINAYCRIGLYSKAEKVFIEMQLKGFDKCVVAYSTMVAMYGKTGRIRDAMRLVAKMK 461

Query: 168 GKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFSIA 1
            KG EPN+  Y  L+D  G+    R   ++ +EM+++ +  D++ Y ++I A++ A
Sbjct: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 36/133 (27%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
 Frame = -2

Query: 408 VVEAWLEGLEIVGNEKIV---SVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYC 238
           +VE  L+ +E + N K+     +   ++  + K   Y  +++V+  + S+G +    +Y 
Sbjct: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403

Query: 237 ILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQ 58
            +++ Y +   +    +VF EM  KG +  +VAY  ++   GK G+ RDA+R+  +M+ +
Sbjct: 404 SIINAYCRIGLYSKAEKVFIEMQLKGFDKCVVAYSTMVAMYGKTGRIRDAMRLVAKMKAK 463

Query: 57  GIEADEIVYNSLI 19
           G E +  +YNSL+
Sbjct: 464 GCEPNVWIYNSLM 476


>ref|XP_006420692.1| hypothetical protein CICLE_v10004581mg [Citrus clementina]
           gi|557522565|gb|ESR33932.1| hypothetical protein
           CICLE_v10004581mg [Citrus clementina]
          Length = 603

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 74/259 (28%), Positives = 129/259 (49%), Gaps = 13/259 (5%)
 Frame = -2

Query: 744 INNKSFFISCHVHVATI-----CRHQDKVCNINGKSQSHSLELVKDIEVEVSKSKYENEK 580
           IN++ F ++   +  TI       HQ  V +   K  S    ++KD + +     Y NE 
Sbjct: 49  INHRFFQVNASTNFPTIELNRDSHHQTAVPDAK-KFDSFLHGMLKDPQTQELAYDYYNEA 107

Query: 579 MLL-----DLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRK 415
             L     +   L +L+   V S+KW  +  L++D ++  +     T S+++ + V++RK
Sbjct: 108 KKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARK 167

Query: 414 FRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCI 235
           F++    L+ + I   E  +  +N+ M  Y KL MY  +I V+  + S G+VLD   YC 
Sbjct: 168 FKIANTLLQ-VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQ 226

Query: 234 LMSCYKKRREWGMTIRVFEEMVGKGVEPNLVA---YGILIDALGKQGKPRDALRVAREMQ 64
           +M  Y K  +      +F E   + ++    +   Y IL D+LGK G+  +AL+  R+M+
Sbjct: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286

Query: 63  KQGIEADEIVYNSLIHAFS 7
           ++GI  D  +Y SLI +F+
Sbjct: 287 EKGILEDPSIYASLICSFA 305



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 30/116 (25%), Positives = 63/116 (54%)
 Frame = -2

Query: 348 YNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMV 169
           Y +++ AY ++ +Y K+ +VF  +  KG    + +Y  +++ Y K       + +  +M 
Sbjct: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461

Query: 168 GKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFSIA 1
            KG EPN+  Y  L+D  G+    R   ++ +EM+++ +  D++ Y ++I A++ A
Sbjct: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517


>gb|EOY32747.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 608

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 58/189 (30%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
 Frame = -2

Query: 558 LVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLE 379
           L +L+   V S+KW  +  L++D +   +     T S++++  +++RKF+VV   L+   
Sbjct: 125 LQLLIRYLVQSKKWDLVMSLSEDFKHYHVLPDSYTCSRLINACIRARKFKVVGTLLQ--- 181

Query: 378 IVGNEKIVSV--YNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRRE 205
           +  ++K+V++  +N+ M  Y KL M+  +I V+ T+   G+  D ESYC +M  Y+   +
Sbjct: 182 VFKSDKVVALIAFNSAMAGYNKLHMFRSTIAVYETMKFNGIFQDAESYCQIMEAYQHLGD 241

Query: 204 WGMTIRVFEEMVGKGVEPNLVA---YGILIDALGKQGKPRDALRVAREMQKQGIEADEIV 34
                  F+E   + ++    A   Y IL ++LGK G+  +AL   R+M K+GI     V
Sbjct: 242 MDKVAAFFDEFESRKLDLTPAAPRVYSILCESLGKSGRAYEALEYFRDMTKKGIPVSSSV 301

Query: 33  YNSLIHAFS 7
           Y+SLI +F+
Sbjct: 302 YSSLIRSFA 310



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 30/111 (27%), Positives = 61/111 (54%)
 Frame = -2

Query: 351 VYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEM 172
           V+  L+  Y+  G+ EK++E+ R +    + +    +C +++ + KRR +   I V+EE+
Sbjct: 336 VFLKLVLMYIDEGLLEKTLEIVRVMKDANIKVSDCIFCTVVNGFSKRRGYQSAIVVYEEL 395

Query: 171 VGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLI 19
           + +G +P  V Y  +I+   + G    A  V  EM+++G +   + Y+S+I
Sbjct: 396 LSQGCKPGQVTYASIINVYCRSGLNSKAETVFSEMEEKGFDKCVVAYSSMI 446



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 5/219 (2%)
 Frame = -2

Query: 642 SLELVKDIEV--EVSKSKYENEKMLLDLQALVVLVNSYVDS---RKWSFLQKLAKDPRVP 478
           S   ++D+ V  E+ K   E  +M+ D +  + LV  Y+D     K   + ++ KD  + 
Sbjct: 308 SFASIRDLTVVEELFKEAAER-RMVRDPEVFLKLVLMYIDEGLLEKTLEIVRVMKDANIK 366

Query: 477 LLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKS 298
           +      TV   ++   K R ++      E L   G +     Y +++  Y + G+  K+
Sbjct: 367 VSDCIFCTV---VNGFSKRRGYQSAIVVYEELLSQGCKPGQVTYASIINVYCRSGLNSKA 423

Query: 297 IEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDA 118
             VF  ++ KG    + +Y  +++ Y K       +++  +M  KG +PN+  Y  L+D 
Sbjct: 424 ETVFSEMEEKGFDKCVVAYSSMIAMYGKTGRIRDAMKLVAKMKHKGCQPNVWIYNSLMDM 483

Query: 117 LGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFSIA 1
            G+    R   ++ +EM+++    D++ Y ++I A+S A
Sbjct: 484 HGRVKNLRQVEKLWKEMKRRKTAPDKVSYTTIISAYSRA 522


>ref|XP_001783392.1| predicted protein [Physcomitrella patens]
           gi|162665090|gb|EDQ51786.1| predicted protein
           [Physcomitrella patens]
          Length = 540

 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 49/173 (28%), Positives = 90/173 (52%)
 Frame = -2

Query: 525 RKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVY 346
           +KW  L+ L  +         +   + ++  ++ + +F+  + W   ++++G    + +Y
Sbjct: 38  QKWVALEILVDEMIGKNCPPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIY 97

Query: 345 NTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVG 166
           N L+  Y K G + ++++ F  +  +GL+ D  +YC ++S  +K           +EM  
Sbjct: 98  NILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMRE 157

Query: 165 KGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFS 7
            G++P+ VAY ILID  GK G+  DA    RE+Q  G   D + YN+LIHAF+
Sbjct: 158 AGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFA 210



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 32/116 (27%), Positives = 59/116 (50%)
 Frame = -2

Query: 354 SVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEE 175
           S Y T++  Y K G +  + E+   +   G   ++ +Y  L+  Y K  +     R+F  
Sbjct: 305 STYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFST 364

Query: 174 MVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFS 7
           M  +G + NL+ Y  ++D  GK G+  DA R+  E++   +  D + Y +LI+A++
Sbjct: 365 MKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYN 420



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 31/116 (26%), Positives = 61/116 (52%)
 Frame = -2

Query: 348 YNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMV 169
           YNTL+ A+ K+GM +++  VF+       + D   +  ++  Y K R     + V + M 
Sbjct: 202 YNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMK 261

Query: 168 GKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFSIA 1
             G++PN + YG +++A  +  +P  A+++  EMQ+      E  Y ++++ +S A
Sbjct: 262 EIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKA 317


>ref|XP_006386713.1| hypothetical protein POPTR_0002s19470g [Populus trichocarpa]
           gi|550345388|gb|ERP64510.1| hypothetical protein
           POPTR_0002s19470g [Populus trichocarpa]
          Length = 873

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 45/112 (40%), Positives = 74/112 (66%)
 Frame = -2

Query: 348 YNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMV 169
           YNTL+  Y KLG +E++++V R +++ G+  D+ +Y  L+  Y K+ ++ +  +VFEEM 
Sbjct: 407 YNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMK 466

Query: 168 GKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHA 13
            + V PNL+ Y  LID   K G  R+A+ V RE +K G++AD ++Y++LI A
Sbjct: 467 ARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDA 518



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 33/121 (27%), Positives = 62/121 (51%)
 Frame = -2

Query: 372 GNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMT 193
           G ++ +  YNTL+ A  K G  + + E+   + +K ++ ++ +Y  ++  Y K       
Sbjct: 329 GIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDA 388

Query: 192 IRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHA 13
             +F EM   G+  + V+Y  L+    K G+  +A+ V REM+  GI  D + YN+L+  
Sbjct: 389 RNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGG 448

Query: 12  F 10
           +
Sbjct: 449 Y 449



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 33/114 (28%), Positives = 59/114 (51%)
 Frame = -2

Query: 348 YNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMV 169
           +N+L+    K G++E +  +   + ++G+  DI +Y  L+    K  +  M   +  EM 
Sbjct: 302 FNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMP 361

Query: 168 GKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFS 7
            K + PN+V Y  +ID   K G+  DA  +  EM+  GI  D + YN+L+  ++
Sbjct: 362 AKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYA 415



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 38/155 (24%), Positives = 72/155 (46%)
 Frame = -2

Query: 573 LDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAW 394
           LD  +   L++ Y    ++     + ++     + K + T + ++    K  K+ VV   
Sbjct: 402 LDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKV 461

Query: 393 LEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKK 214
            E ++       +  Y+TL+  Y K G+Y ++++VFR     GL  D+  Y  L+    K
Sbjct: 462 FEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCK 521

Query: 213 RREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGK 109
                  + + +EM  +G+ PN+V Y  +IDA G+
Sbjct: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
 Frame = -2

Query: 321 KLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLV 142
           +LG  E +  VF+   ++G    + ++  ++S Y +       I++F  M   G++PNLV
Sbjct: 205 RLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLV 264

Query: 141 AYGILIDALGKQG-KPRDALRVAREMQKQGIEADEIVYNSLI 19
            Y  +IDA GK G + +  L +  EM + G++ D I +NSL+
Sbjct: 265 TYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLL 306


>ref|XP_002301519.2| hypothetical protein POPTR_0002s19470g [Populus trichocarpa]
           gi|550345387|gb|EEE80792.2| hypothetical protein
           POPTR_0002s19470g [Populus trichocarpa]
          Length = 864

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 45/112 (40%), Positives = 74/112 (66%)
 Frame = -2

Query: 348 YNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMV 169
           YNTL+  Y KLG +E++++V R +++ G+  D+ +Y  L+  Y K+ ++ +  +VFEEM 
Sbjct: 407 YNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMK 466

Query: 168 GKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHA 13
            + V PNL+ Y  LID   K G  R+A+ V RE +K G++AD ++Y++LI A
Sbjct: 467 ARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDA 518



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 33/121 (27%), Positives = 62/121 (51%)
 Frame = -2

Query: 372 GNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMT 193
           G ++ +  YNTL+ A  K G  + + E+   + +K ++ ++ +Y  ++  Y K       
Sbjct: 329 GIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDA 388

Query: 192 IRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHA 13
             +F EM   G+  + V+Y  L+    K G+  +A+ V REM+  GI  D + YN+L+  
Sbjct: 389 RNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGG 448

Query: 12  F 10
           +
Sbjct: 449 Y 449



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 33/114 (28%), Positives = 59/114 (51%)
 Frame = -2

Query: 348 YNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMV 169
           +N+L+    K G++E +  +   + ++G+  DI +Y  L+    K  +  M   +  EM 
Sbjct: 302 FNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMP 361

Query: 168 GKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFS 7
            K + PN+V Y  +ID   K G+  DA  +  EM+  GI  D + YN+L+  ++
Sbjct: 362 AKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYA 415



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 38/155 (24%), Positives = 72/155 (46%)
 Frame = -2

Query: 573 LDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAW 394
           LD  +   L++ Y    ++     + ++     + K + T + ++    K  K+ VV   
Sbjct: 402 LDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKV 461

Query: 393 LEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKK 214
            E ++       +  Y+TL+  Y K G+Y ++++VFR     GL  D+  Y  L+    K
Sbjct: 462 FEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCK 521

Query: 213 RREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGK 109
                  + + +EM  +G+ PN+V Y  +IDA G+
Sbjct: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
 Frame = -2

Query: 321 KLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLV 142
           +LG  E +  VF+   ++G    + ++  ++S Y +       I++F  M   G++PNLV
Sbjct: 205 RLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLV 264

Query: 141 AYGILIDALGKQG-KPRDALRVAREMQKQGIEADEIVYNSLI 19
            Y  +IDA GK G + +  L +  EM + G++ D I +NSL+
Sbjct: 265 TYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLL 306


>gb|EXB28566.1| hypothetical protein L484_009725 [Morus notabilis]
          Length = 871

 Score = 91.3 bits (225), Expect = 5e-16
 Identities = 43/113 (38%), Positives = 74/113 (65%)
 Frame = -2

Query: 351 VYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEM 172
           +YNTL+  Y KLG +E++++V + ++S G+V D+ SY  L+  Y K+ ++    R++++M
Sbjct: 403 LYNTLLSIYAKLGRFEEALKVCKEMESSGIVRDVVSYNALLGGYGKQGKYDEVKRMYQDM 462

Query: 171 VGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHA 13
               V PNL+ Y  LID   K G  R+A+ V RE ++ G++AD ++Y+ LI+A
Sbjct: 463 KADHVSPNLLTYSTLIDVYSKGGLYREAMEVFREFKQAGLKADVVLYSELINA 515



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
 Frame = -2

Query: 321 KLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLV 142
           +LG  E + +VF T    G    + +Y  L+S Y +   W    RV E M   G++PNLV
Sbjct: 202 RLGKVELARDVFETALFAGYGNTVYTYSALISAYGRSGYWEEARRVVESMKDSGLKPNLV 261

Query: 141 AYGILIDALGKQGKP-RDALRVAREMQKQGIEADEIVYNSLI 19
            Y  +IDA GK G   +  + +  EM + G++ D I YNSL+
Sbjct: 262 TYNAVIDACGKGGAEFKRVVEIFDEMLRNGVQPDRITYNSLL 303



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
 Frame = -2

Query: 549 LVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKS-RKF-RVVEAWLEGLEI 376
           L+++Y  S  W   +++ +  +   L   L T + ++    K   +F RVVE + E L  
Sbjct: 231 LISAYGRSGYWEEARRVVESMKDSGLKPNLVTYNAVIDACGKGGAEFKRVVEIFDEMLRN 290

Query: 375 VGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGM 196
            G +     YN+L+    + G++E +  +F  +  + +  DI +Y  L+    K  +  +
Sbjct: 291 -GVQPDRITYNSLLAVCSRGGLWEAARSLFSEMVERQIDQDIYTYNTLLDAICKGGQMDL 349

Query: 195 TIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIH 16
             ++  EM  K + PN+V Y  +ID   K G+  DAL +  EM+   I  D ++YN+L+ 
Sbjct: 350 ARQIMSEMPSKKILPNVVTYSTMIDGYAKAGRLEDALNLFNEMKYLAIGLDRVLYNTLLS 409

Query: 15  AFS 7
            ++
Sbjct: 410 IYA 412



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 33/117 (28%), Positives = 62/117 (52%)
 Frame = -2

Query: 357 VSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFE 178
           V  Y+T++  Y K G  E ++ +F  +    + LD   Y  L+S Y K   +   ++V +
Sbjct: 366 VVTYSTMIDGYAKAGRLEDALNLFNEMKYLAIGLDRVLYNTLLSIYAKLGRFEEALKVCK 425

Query: 177 EMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFS 7
           EM   G+  ++V+Y  L+   GKQGK  +  R+ ++M+   +  + + Y++LI  +S
Sbjct: 426 EMESSGIVRDVVSYNALLGGYGKQGKYDEVKRMYQDMKADHVSPNLLTYSTLIDVYS 482



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 39/166 (23%), Positives = 76/166 (45%)
 Frame = -2

Query: 573 LDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAW 394
           LD      L++ Y    ++    K+ K+     + + + + + ++    K  K+  V+  
Sbjct: 399 LDRVLYNTLLSIYAKLGRFEEALKVCKEMESSGIVRDVVSYNALLGGYGKQGKYDEVKRM 458

Query: 393 LEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKK 214
            + ++       +  Y+TL+  Y K G+Y +++EVFR     GL  D+  Y  L++   K
Sbjct: 459 YQDMKADHVSPNLLTYSTLIDVYSKGGLYREAMEVFREFKQAGLKADVVLYSELINALCK 518

Query: 213 RREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVA 76
                  + + +EM  +G+ PN++ Y  +IDA G+      AL  A
Sbjct: 519 NGMVESAVSLLDEMTKEGIMPNVITYNSIIDAFGRPATADSALGAA 564



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 31/116 (26%), Positives = 59/116 (50%)
 Frame = -2

Query: 357 VSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFE 178
           +  YNTL+ A  K G  + + ++   + SK ++ ++ +Y  ++  Y K       + +F 
Sbjct: 331 IYTYNTLLDAICKGGQMDLARQIMSEMPSKKILPNVVTYSTMIDGYAKAGRLEDALNLFN 390

Query: 177 EMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAF 10
           EM    +  + V Y  L+    K G+  +AL+V +EM+  GI  D + YN+L+  +
Sbjct: 391 EMKYLAIGLDRVLYNTLLSIYAKLGRFEEALKVCKEMESSGIVRDVVSYNALLGGY 446


>ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534547|gb|EEF36246.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 91.3 bits (225), Expect = 5e-16
 Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
 Frame = -2

Query: 666 INGKSQSHSLE-LVKDIEVEVSKSKYENEKMLLDLQALVVLVNSYVDSRKWSFLQKLAKD 490
           +NG    H ++  V+  EV V +       + +D+ +   L+N Y  S K      L + 
Sbjct: 226 LNGLCLHHQMDHAVRLFEVMVERG------IKIDVISYNTLINGYCTSGKTEEAMTLFRK 279

Query: 489 PRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGM 310
            +   L+  + T + ++    ++ + R  +     ++I G    +  Y  L+    K G 
Sbjct: 280 MQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGC 339

Query: 309 YEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGI 130
            E++I+VFR++ S      I  Y IL+    + R W   + +F+E+   G+ PN+V Y I
Sbjct: 340 IEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNI 399

Query: 129 LIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAF 10
           +I+ L K+GK  +A R+  +M++ G E DEI +N +I  F
Sbjct: 400 MINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGF 439



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 35/118 (29%), Positives = 68/118 (57%)
 Frame = -2

Query: 357 VSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFE 178
           V VY++L+    ++G   +++ +F  + S+G+  ++ +Y  L+    +   W    R F 
Sbjct: 114 VIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFS 173

Query: 177 EMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFSI 4
           +MVG+G+ P++V +  LID L K+GK ++A ++   M KQG   + + YNSL++   +
Sbjct: 174 QMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCL 231



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 36/147 (24%), Positives = 77/147 (52%)
 Frame = -2

Query: 450 SKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDS 271
           S +++   +  K R      + +   G +  V  YN+L+ A  + G+++++   F  +  
Sbjct: 118 SSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVG 177

Query: 270 KGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRD 91
           +G++ D+ ++  L+    K+ +     ++FE M+ +G  PN+V Y  L++ L    +   
Sbjct: 178 EGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDH 237

Query: 90  ALRVAREMQKQGIEADEIVYNSLIHAF 10
           A+R+   M ++GI+ D I YN+LI+ +
Sbjct: 238 AVRLFEVMVERGIKIDVISYNTLINGY 264



 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 37/115 (32%), Positives = 65/115 (56%)
 Frame = -2

Query: 357 VSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFE 178
           + +Y  L+ A  K     +++E+ R + S+    +  +Y +++    K       +++F 
Sbjct: 44  ILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFR 103

Query: 177 EMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHA 13
           EM+  G+ PN++ Y  LI+ L + GK R+A+ +  EM  QGI+A+ I YNSLIHA
Sbjct: 104 EMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHA 158


>emb|CBI27495.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score = 90.9 bits (224), Expect = 7e-16
 Identities = 53/174 (30%), Positives = 99/174 (56%), Gaps = 3/174 (1%)
 Frame = -2

Query: 519 WSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNT 340
           + + QK+ + P      + L  + +++ + +++RKFR+ E+ LE      ++  + V+N+
Sbjct: 71  FDYYQKVKERPEFRPDKETLERIIRLISSCIRARKFRITESLLEVFSY-NDDVALLVFNS 129

Query: 339 LMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKG 160
            M  Y KL M+  +I V+  + S G+V + ESY  +M  Y K R++   + +F+E   + 
Sbjct: 130 AMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRK 189

Query: 159 VEPNLVA---YGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFS 7
           ++ +  +   Y IL ++LGK G+  +AL   R+M K+GI  D  VY+SLI +F+
Sbjct: 190 IDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFA 243



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 3/209 (1%)
 Frame = -2

Query: 618 EVEVSKSKY---ENEKMLLDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVS 448
           EV+V++  +   E +K+L D +  + LV  YV+        ++ K  +   +        
Sbjct: 247 EVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFC 306

Query: 447 KIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSK 268
            I++   K R  R      + L + G E     Y +++  Y ++ +Y K+  VF  ++ K
Sbjct: 307 AIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMVFSEMEKK 366

Query: 267 GLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDA 88
           G    + +Y  ++  Y K       +R+  +M  +G EPN+  Y  L+D  G+    R  
Sbjct: 367 GFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQV 426

Query: 87  LRVAREMQKQGIEADEIVYNSLIHAFSIA 1
            ++ +EM+++ +  D + Y S+I A+S A
Sbjct: 427 EKLWKEMKRKKVVPDRVSYTSVISAYSKA 455


>emb|CBI36966.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 6/132 (4%)
 Frame = -2

Query: 390 EGLEIVGNEKIVSV------YNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILM 229
           E L +    K  S+      YNTL+  Y KLG +E+++ V + ++S G+  D  +Y  L+
Sbjct: 265 EALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALL 324

Query: 228 SCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIE 49
             Y K+ ++    RVFEEM  + + PNL+ Y  LID   K G  ++A+ V RE +K G++
Sbjct: 325 GGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLK 384

Query: 48  ADEIVYNSLIHA 13
           AD ++Y++LI A
Sbjct: 385 ADVVLYSALIDA 396



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 42/162 (25%), Positives = 74/162 (45%)
 Frame = -2

Query: 573 LDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAW 394
           LD  +   L++ Y    ++     + K+     + K   T + ++    K  K+  V+  
Sbjct: 280 LDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRV 339

Query: 393 LEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKK 214
            E ++       +  Y+TL+  Y K G+Y++++EVFR     GL  D+  Y  L+    K
Sbjct: 340 FEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCK 399

Query: 213 RREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDA 88
                  +   +EM  +G+ PN+V Y  +IDA G+ G   DA
Sbjct: 400 NGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDA 441



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 32/121 (26%), Positives = 62/121 (51%)
 Frame = -2

Query: 372 GNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMT 193
           G E+ +  YNTL+ A  K G  + + ++   +  K ++ ++ +Y  ++  Y K       
Sbjct: 207 GIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEA 266

Query: 192 IRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHA 13
           + +F EM    +  + V+Y  L+    K G+  +AL V +EM+  GI+ D + YN+L+  
Sbjct: 267 LNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGG 326

Query: 12  F 10
           +
Sbjct: 327 Y 327


>ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 6/132 (4%)
 Frame = -2

Query: 390 EGLEIVGNEKIVSV------YNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILM 229
           E L +    K  S+      YNTL+  Y KLG +E+++ V + ++S G+  D  +Y  L+
Sbjct: 379 EALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALL 438

Query: 228 SCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIE 49
             Y K+ ++    RVFEEM  + + PNL+ Y  LID   K G  ++A+ V RE +K G++
Sbjct: 439 GGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLK 498

Query: 48  ADEIVYNSLIHA 13
           AD ++Y++LI A
Sbjct: 499 ADVVLYSALIDA 510



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
 Frame = -2

Query: 321 KLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLV 142
           +LG  E +  VF T  ++G    + ++  L+S Y +       I+VFE M   G++PNLV
Sbjct: 197 RLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLV 256

Query: 141 AYGILIDALGKQGKP-RDALRVAREMQKQGIEADEIVYNSLI 19
            Y  +IDA GK G     A  +  EM + G++ D I +NSL+
Sbjct: 257 TYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLL 298



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 32/121 (26%), Positives = 62/121 (51%)
 Frame = -2

Query: 372 GNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMT 193
           G E+ +  YNTL+ A  K G  + + ++   +  K ++ ++ +Y  ++  Y K       
Sbjct: 321 GIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEA 380

Query: 192 IRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHA 13
           + +F EM    +  + V+Y  L+    K G+  +AL V +EM+  GI+ D + YN+L+  
Sbjct: 381 LNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGG 440

Query: 12  F 10
           +
Sbjct: 441 Y 441



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 40/157 (25%), Positives = 72/157 (45%)
 Frame = -2

Query: 573 LDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAW 394
           LD  +   L++ Y    ++     + K+     + K   T + ++    K  K+  V+  
Sbjct: 394 LDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRV 453

Query: 393 LEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKK 214
            E ++       +  Y+TL+  Y K G+Y++++EVFR     GL  D+  Y  L+    K
Sbjct: 454 FEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCK 513

Query: 213 RREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQG 103
                  +   +EM  +G+ PN+V Y  +IDA G+ G
Sbjct: 514 NGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 550


>emb|CBI24106.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 66/232 (28%), Positives = 120/232 (51%), Gaps = 8/232 (3%)
 Frame = -2

Query: 678 KVCNINGKSQSHSLELVK-DIEVEVSKSKYENEKMLLDLQALVVLVNSYVDSRK----WS 514
           +V ++      H L +++ D+E+     K EN   L D      L   + D R     + 
Sbjct: 7   RVISLESTHDHHHLPVIELDVELPDLTPKDEN---LNDF-----LCGLFRDPRSEELAFD 58

Query: 513 FLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLM 334
           + QK+ + P      + L  + +++ + +++RKFR+ E+ LE      ++  + V N+ M
Sbjct: 59  YYQKVKERPEFRPDKETLERIIRLISSCIRARKFRITESLLEVFSY-NDDVALLVCNSAM 117

Query: 333 RAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVE 154
             Y KL M+  +I V+  + S G+V + ESY  +M  Y K R++   + +F+E   + ++
Sbjct: 118 GGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKID 177

Query: 153 PNLVA---YGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHAFS 7
            +  +   Y IL ++LGK G+  +AL   R+M K+GI  D  VY+SLI +F+
Sbjct: 178 SSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFA 229



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 48/209 (22%), Positives = 97/209 (46%), Gaps = 3/209 (1%)
 Frame = -2

Query: 618 EVEVSKSKY---ENEKMLLDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVS 448
           EV+V++  +   E +K+L D +  + LV  YV+        ++ K  +   +        
Sbjct: 233 EVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTIEIVKAMKNVKIRVSDCIFC 292

Query: 447 KIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSK 268
            I++   K R  R      + L + G E     Y +++  Y ++ +Y K+  +F  ++ K
Sbjct: 293 AIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMMFSEMEKK 352

Query: 267 GLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDA 88
           G    + +Y  ++  Y K       +R+  +M  +G +PN+  Y  L+D  G+    R  
Sbjct: 353 GFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQV 412

Query: 87  LRVAREMQKQGIEADEIVYNSLIHAFSIA 1
            ++ +EM+++ +  D + Y S+I A+S A
Sbjct: 413 EKLWKEMKRKKVVPDRVSYTSVISAYSKA 441


>ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 603

 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 55/191 (28%), Positives = 103/191 (53%), Gaps = 3/191 (1%)
 Frame = -2

Query: 570 DLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWL 391
           D + L  ++   + S+KW     + +D +            +++ + +++RKFR+ E+ L
Sbjct: 116 DKETLERIIRYLIRSKKWGLSLLVFEDFKSFDAQLDGDICCRLISSCIRARKFRITESLL 175

Query: 390 EGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKR 211
           E      ++  + V+N+ M  Y KL M+  +I V+  + S G+V + ESY  +M  Y K 
Sbjct: 176 EVFSY-NDDVALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKI 234

Query: 210 REWGMTIRVFEEMVGKGVEPNLVA---YGILIDALGKQGKPRDALRVAREMQKQGIEADE 40
           R++   + +F+E   + ++ +  +   Y IL ++LGK G+  +AL   R+M K+GI  D 
Sbjct: 235 RDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDS 294

Query: 39  IVYNSLIHAFS 7
            VY+SLI +F+
Sbjct: 295 AVYSSLICSFA 305



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 3/209 (1%)
 Frame = -2

Query: 618 EVEVSKSKY---ENEKMLLDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVS 448
           EV+V++  +   E +K+L D +  + LV  YV+        ++ K  +   +        
Sbjct: 309 EVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFC 368

Query: 447 KIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSK 268
            I++   K R  R      + L + G E     Y +++  Y ++ +Y K+  VF  ++ K
Sbjct: 369 AIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMVFSEMEKK 428

Query: 267 GLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDA 88
           G    + +Y  ++  Y K       +R+  +M  +G EPN+  Y  L+D  G+    R  
Sbjct: 429 GFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQV 488

Query: 87  LRVAREMQKQGIEADEIVYNSLIHAFSIA 1
            ++ +EM+++ +  D + Y S+I A+S A
Sbjct: 489 EKLWKEMKRKKVVPDRVSYTSVISAYSKA 517


>gb|EMT04238.1| hypothetical protein F775_13122 [Aegilops tauschii]
          Length = 662

 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 67/256 (26%), Positives = 115/256 (44%)
 Frame = -2

Query: 777 ENGYRGKKCKNINNKSFFISCHVHVATICRHQDKVCNINGKSQSHSLELVKDIEVEVSKS 598
           + G  GK C N+ ++        +V T     D +CN     ++   ELV  ++  V+K 
Sbjct: 114 KEGETGKAC-NLFHEMMQQDVEPNVWTYSSIIDALCNARAMDKA---ELV--LQQMVNKG 167

Query: 597 KYENEKMLLDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSR 418
              N            +++ Y  S +W    KL ++ +   L     T + +M    K  
Sbjct: 168 VQPNNV------TYNCMIHGYSTSGRWKEAAKLFREMKSRGLIPDTSTCNALMTYHCKHG 221

Query: 417 KFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYC 238
           + +    + + +   G+  ++S Y  L+  Y   G +   I++F +++S G V D   + 
Sbjct: 222 RSKEAAEFFDAMTAKGHRDVIS-YCILLHGYANEGCFADMIDLFNSMESNGFVADCHVFT 280

Query: 237 ILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQ 58
           IL+  Y KR      + +F EM  KGV PN+V Y  +I AL + G+  DA+    EM   
Sbjct: 281 ILIDAYAKRGMMDEAMLIFTEMREKGVSPNVVTYSTVIAALCRLGRLSDAMDRFNEMTDM 340

Query: 57  GIEADEIVYNSLIHAF 10
           G++ +  VY+SLI  F
Sbjct: 341 GVQPNTAVYHSLIQGF 356



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 38/141 (26%), Positives = 69/141 (48%)
 Frame = -2

Query: 441 MHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGL 262
           MH  +   K  V E   +G+   G    V  +++L+  Y  +G   K++ V   + S G+
Sbjct: 358 MHGDLVKVKEFVSEMMNKGM---GERPNVITFSSLIDGYGLVGQMGKALGVLDAMVSAGI 414

Query: 261 VLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALR 82
             ++ +Y  L+  Y K       + +F EM  K ++PN V YG+++D L + G+   A  
Sbjct: 415 EPNVVTYSSLLDGYCKNGRINDALILFREMPHKRIKPNTVTYGVMLDGLFRAGRTVAARE 474

Query: 81  VAREMQKQGIEADEIVYNSLI 19
           +  EM ++GI     +YN ++
Sbjct: 475 MFHEMTERGIPVSISIYNIIL 495


>ref|XP_004298632.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 604

 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 59/224 (26%), Positives = 115/224 (51%), Gaps = 6/224 (2%)
 Frame = -2

Query: 660 GKSQSHSLELVKDIEVE-VSKSKYENEKMLLDLQ----ALVVLVNSYVDSRKWSFLQKLA 496
           GK      EL +D E E +   +YE  K + + +     L  +    V S+KW  +  + 
Sbjct: 84  GKLNEFLCELFQDPEKEAMGYEQYEKAKKVAEFRPNKSTLEHVTRYLVRSKKWDSILSVC 143

Query: 495 KDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKL 316
            D +   L     T S+++ + +++RKF+VV   L+  +  G+  + ++ ++ MR Y +L
Sbjct: 144 TDFKTYDLLPDRYTCSRLVTSCIRARKFKVVRTLLQVFKSDGDVALPAL-DSAMRGYNEL 202

Query: 315 GMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAY 136
            MY  ++ VF  + S G+  D   YC +M  Y ++ +    + +F+++  + ++   ++ 
Sbjct: 203 HMYRSTMSVFEEMISAGIGPDSGCYCRIMEAYFRKGDHKKVVELFQDLKSRQLDLTPLSI 262

Query: 135 GILIDALGKQGKPRDALRVAREMQKQGIEADEI-VYNSLIHAFS 7
            IL  +L K GKP +AL + R + K+G+  D   +Y+ LI +F+
Sbjct: 263 QILCQSLAKLGKPLEALEIFRSVTKEGVSLDSSKIYSVLISSFA 306



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 52/216 (24%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
 Frame = -2

Query: 642 SLELVKDIEV-EVSKSKYENEKMLLDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSK 466
           S   ++D++V E    + E +KML D    + L+  YV+        ++ K  +   +  
Sbjct: 304 SFASIRDVKVAEELFKEAETKKMLRDPTVFLRLITMYVEEGLLDMTLEVVKAMKGANIRV 363

Query: 465 KLGTVSKIMHN-SVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEV 289
                  ++   S KS     V+ + E L ++G E     Y +++  Y +LG+Y K+  V
Sbjct: 364 SDNICCAVVSGFSRKSTLLNAVKVF-EDLILMGCEPGQVTYASVINVYCRLGLYSKAEMV 422

Query: 288 FRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGK 109
           FR ++ KG    + +Y  ++  Y K       +R+  +M  +G +PN+  Y  L+D  G+
Sbjct: 423 FREMEEKGFDKCVVAYSSMVVMYGKTGRPREAMRLVAKMKERGCKPNVWIYNSLMDMYGR 482

Query: 108 QGKPRDALRVAREMQKQGIEADEIVYNSLIHAFSIA 1
               R   ++  EM+++ +  D++ Y ++I A++ A
Sbjct: 483 DNNTRHVAKLWSEMKRRKVAPDKVSYTTVIGAYNKA 518


>ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545740|gb|EEF47244.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 878

 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 43/112 (38%), Positives = 72/112 (64%)
 Frame = -2

Query: 348 YNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMV 169
           YNTL+  Y KLG +E++++V + +++ G+  D+ +Y  L++ Y K+  +    RVFEEM 
Sbjct: 404 YNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMK 463

Query: 168 GKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHA 13
              V PNL+ Y  LID   K G  ++A+ V RE ++ G++AD ++Y++LI A
Sbjct: 464 RGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDA 515



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 37/137 (27%), Positives = 69/137 (50%)
 Frame = -2

Query: 417 KFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYC 238
           +F+ V    +G+   G +     +N+L+    + G++E +  +F  +  KG+  DI +Y 
Sbjct: 276 EFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYN 335

Query: 237 ILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQ 58
            L+    K  +  +   +  EM  K + PN+V Y  +ID   K G+  DAL +  EM+  
Sbjct: 336 TLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFL 395

Query: 57  GIEADEIVYNSLIHAFS 7
           G+  D + YN+L+  ++
Sbjct: 396 GVGLDRVSYNTLLSVYA 412



 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 34/121 (28%), Positives = 62/121 (51%)
 Frame = -2

Query: 372 GNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMT 193
           G ++ +  YNTL+ A  K G  + + E+   + +K ++ ++ +Y  ++  Y K       
Sbjct: 326 GIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDA 385

Query: 192 IRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIHA 13
           + +F EM   GV  + V+Y  L+    K G+   AL V +EM+  GI  D + YN+L+  
Sbjct: 386 LNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAG 445

Query: 12  F 10
           +
Sbjct: 446 Y 446



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
 Frame = -2

Query: 372 GNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESY-CILMSCYKKRREWGM 196
           G  K V  ++ L+ AY + G   ++I+VF ++ S GL+ ++ +Y  ++ +C K   E+  
Sbjct: 220 GYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKK 279

Query: 195 TIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLIH 16
            + +F+ M+  GV+P+ + +  L+    + G    A R+   M  +GI+ D   YN+L+ 
Sbjct: 280 VVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLD 339

Query: 15  A 13
           A
Sbjct: 340 A 340



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 38/155 (24%), Positives = 73/155 (47%)
 Frame = -2

Query: 573 LDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAW 394
           LD  +   L++ Y    ++     + K+     + K + T + ++    K  ++  V   
Sbjct: 399 LDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRV 458

Query: 393 LEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKK 214
            E ++       +  Y+TL+  Y K G+Y++++EVFR     GL  D+  Y  L+    K
Sbjct: 459 FEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCK 518

Query: 213 RREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGK 109
                 ++ + +EM  +G+ PN+V Y  +IDA G+
Sbjct: 519 NGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGR 553



 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = -2

Query: 321 KLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLV 142
           +LG  E +  VF T   +G    + ++  L+S Y +       I+VF+ M   G+ PNLV
Sbjct: 202 RLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLV 261

Query: 141 AYGILIDALGKQG-KPRDALRVAREMQKQGIEADEIVYNSLI 19
            Y  +IDA GK G + +  + +   M   G++ D I +NSL+
Sbjct: 262 TYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLL 303


>ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 609

 Score = 87.8 bits (216), Expect = 6e-15
 Identities = 55/191 (28%), Positives = 103/191 (53%), Gaps = 3/191 (1%)
 Frame = -2

Query: 570 DLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWL 391
           D + L  ++   + S+KW     + +D +   +        +++ + +++RKFR+ E+ L
Sbjct: 117 DKETLERIIRYLIRSKKWGLSLLVFEDFKSFDVQLDGDICCRLISSCIRARKFRITESLL 176

Query: 390 EGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKR 211
           E      ++  + V N+ M  Y KL M+  +I V+  + S G+V + ESY  +M  Y K 
Sbjct: 177 EVFSY-NDDVALLVCNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKI 235

Query: 210 REWGMTIRVFEEMVGKGVEPNLVA---YGILIDALGKQGKPRDALRVAREMQKQGIEADE 40
           R++   + +F+E   + ++ +  +   Y IL ++LGK G+  +AL   R+M K+GI  D 
Sbjct: 236 RDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDS 295

Query: 39  IVYNSLIHAFS 7
            VY+SLI +F+
Sbjct: 296 AVYSSLICSFA 306



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 48/209 (22%), Positives = 97/209 (46%), Gaps = 3/209 (1%)
 Frame = -2

Query: 618 EVEVSKSKY---ENEKMLLDLQALVVLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVS 448
           EV+V++  +   E +K+L D +  + LV  YV+        ++ K  +   +        
Sbjct: 310 EVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTIEIVKAMKNVKIRVSDCIFC 369

Query: 447 KIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSK 268
            I++   K R  R      + L + G E     Y +++  Y ++ +Y K+  +F  ++ K
Sbjct: 370 AIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMMFSEMEKK 429

Query: 267 GLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDA 88
           G    + +Y  ++  Y K       +R+  +M  +G +PN+  Y  L+D  G+    R  
Sbjct: 430 GFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQV 489

Query: 87  LRVAREMQKQGIEADEIVYNSLIHAFSIA 1
            ++ +EM+++ +  D + Y S+I A+S A
Sbjct: 490 EKLWKEMKRKKVVPDRVSYTSVISAYSKA 518


>ref|XP_004305365.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 802

 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 48/147 (32%), Positives = 76/147 (51%)
 Frame = -2

Query: 456 TVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTV 277
           T S ++H   +++     E W++ +   G    + VYNTL+  Y ++  ++K  E+   +
Sbjct: 409 TFSLLIHKFCETKDMDKAEEWVQKMLKKGVSPNLEVYNTLINGYGRICTFDKCFEILEDM 468

Query: 276 DSKGLVLDIESYCILMSCYKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKP 97
           +SK +  ++ SY  L++C  K            +MVG+GV PN   Y +LID    QGK 
Sbjct: 469 ESKAIKPNVVSYGSLINCLCKDGRLLEAELQLRDMVGRGVLPNAQIYNMLIDGSSTQGKL 528

Query: 96  RDALRVAREMQKQGIEADEIVYNSLIH 16
           +DA R   EM K GI    + YN+LIH
Sbjct: 529 KDAFRFFDEMAKNGISPTLVTYNALIH 555



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 29/249 (11%)
 Frame = -2

Query: 675 VCNINGKSQSHSLELVKDIEVEVSK-----------------SKYENEKMLLDLQALV-- 553
           VC ++ + Q H  E V+ + + + +                 S + +   L DL +L   
Sbjct: 27  VCTVSDQDQQHRHEQVRKLRILLQQGRTDAAARFIKSLILPTSPFSSPSDLYDLFSLSAP 86

Query: 552 --------VLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFR-VVE 400
                   +L+ +  DS+      +L    R   L   L T+++++   V S+ F   +E
Sbjct: 87  SITPAFSDMLLTACTDSKMPKQAVELYALMRKSDLRPSLATLNQLLECLVGSKMFEETLE 146

Query: 399 AWLEGLEI-VGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSC 223
            + +  E   G +     Y   ++A +KLG  +++ E+  ++ +  LV ++  + +L+  
Sbjct: 147 LFSQIFESGKGIKPDKFTYGKAVQAAVKLGDLKRAGEIVESMKTMRLVPNVFIFNVLIGG 206

Query: 222 YKKRREWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEAD 43
             K R      +VF+EM+ +   P LV Y  LID   K G+   A  V   M+ Q +EA+
Sbjct: 207 LCKERRMRDAEKVFDEMLERKGVPTLVTYNTLIDGYCKVGEVEKAFEVRERMKDQKVEAN 266

Query: 42  EIVYNSLIH 16
            + YN+L++
Sbjct: 267 VVTYNTLLN 275



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
 Frame = -2

Query: 513  FLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLM 334
            F  ++AK+     +S  L T + ++H   K  +    E ++  +   G    V  YN+L+
Sbjct: 534  FFDEMAKNG----ISPTLVTYNALIHGLCKKGRMIEAEDYVSQITSSGYRPDVITYNSLI 589

Query: 333  RAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMS-CYKKRREWGMTIRVFEEMVGKGV 157
              Y      +K +E++  + + G+   + +Y  L+S C   R    +  ++  EM+  G+
Sbjct: 590  SGYSDTVNTQKCLELYEAMKNLGITPTLYTYHPLISGC--SRDNMVLAEKLLNEMLQMGL 647

Query: 156  EPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYNSLI 19
             P+ + Y  LI    + G  + AL +  EM  Q I  D++ YNSLI
Sbjct: 648  RPDRIIYNALIHGYAEHGDIQKALSLRSEMVDQKINVDKMTYNSLI 693



 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 5/186 (2%)
 Frame = -2

Query: 552 VLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRV--VEAWLEGLE 379
           VL+      R+    +K+  +    +L +K G  + + +N++     +V  VE   E  E
Sbjct: 202 VLIGGLCKERRMRDAEKVFDE----MLERK-GVPTLVTYNTLIDGYCKVGEVEKAFEVRE 256

Query: 378 IVGNEKI---VSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGLVLDIESYCILMSCYKKRR 208
            + ++K+   V  YNTL+    +    E +  V   +++ G   D  +Y IL   + +  
Sbjct: 257 RMKDQKVEANVVTYNTLLNGLCRGKRMEDAKRVLEEMEAHGFAPDGFTYSILFDGHLRCG 316

Query: 207 EWGMTIRVFEEMVGKGVEPNLVAYGILIDALGKQGKPRDALRVAREMQKQGIEADEIVYN 28
           +    + +F+E+  KGV  N     IL++ L K+GK  +A  V +++   G   DE+VYN
Sbjct: 317 DDQGVLALFDEIARKGVRINGYTCSILLNGLCKKGKVEEAEEVLKKLLDTGFVPDEVVYN 376

Query: 27  SLIHAF 10
           +L+  +
Sbjct: 377 TLVSGY 382