BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00015534
         (2098 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_003093445.1| flagellar biosynthesis protein FliS [Strepto...    59   6e-06

>ref|WP_003093445.1| flagellar biosynthesis protein FliS [Streptococcus vestibularis]
            gi|311100697|gb|EFQ58902.1| putative flagellar protein
            FliS [Streptococcus vestibularis F0396]
          Length = 2281

 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 94/447 (21%), Positives = 178/447 (39%), Gaps = 28/447 (6%)
 Frame = +1

Query: 451  AALSSQPSSSRTFSADPAQS---GKSVSIPQKGVPKSRVSYG-FGENSNFTSSKQHACPV 618
            A++S+  S+S + S   +QS    +S S  +       VS       S+  S  Q     
Sbjct: 1220 ASVSASESASESDSVSESQSLSNSESASTSESISESQSVSNSESASESDSVSESQSVSNS 1279

Query: 619  DFRPKTMISSKGKSVRHPETVSSSRREAAVSLGKNITREESWDNLELFNINDRLPDSFS- 795
            D   ++ + S+ +SV + E+ S+S   A+VS  ++++  ES       ++++ + +S S 
Sbjct: 1280 DSASESALISESQSVSNSESASTS---ASVSTSQSLSNSES------ASVSESVSESQSV 1330

Query: 796  DRQEHIWMKVDESVPTETEENPCT-------------ESLSIADQGITRQFLMDRSDSSA 936
               E   +   ESV T   E+  T             ES S +D   T Q  +  S+S++
Sbjct: 1331 SNSESASISASESVSTSASESASTSASISESQSVSNSESASESDSVSTSQ-SVSNSESAS 1389

Query: 937  SPNEESVFSRYSAKEQTSTRRKISSSKDHVNSPLNSKDDHLASSSNAVARGSGNTFVXXX 1116
            +    S     S  E  S    IS S+   NS  +S+ + ++ S +     S +  V   
Sbjct: 1390 TSASVSTSQSVSNSESASVSESISDSQSVSNSESSSESESISESQSLSNSESASVSVSIL 1449

Query: 1117 XXXXXXXXXXXXXXXXXREHLVGLTGSRRGSQRRIVSDSQPTLRNRHSTKHSAVNLSAQK 1296
                              E    ++ S   S+   VS+SQ    +  S++ ++++ S   
Sbjct: 1450 ESQSVSNSESASTSVSISES-QSVSNSESSSESESVSESQSVSNSESSSESASISESQSV 1508

Query: 1297 SGRHAQETGPSITSAKAPLTSRRTVRAMQPSTWCSRGISSEDAVIDSGRIAEN------- 1455
            S   +  T  SI+ +++   S     +   S   S+ +S+ ++  +S  I+E+       
Sbjct: 1509 SNSESASTSESISESQSLSNSESASTSASISE--SQSVSNSESSSESASISESQSVSNSE 1566

Query: 1456 --SRPMPLPEQTGLRSNRQEPAASRSRRSRNTIGQHRPEDILQGGCSMPGVRMANRLSGS 1629
              S    + E   L SN +  + S S  +  ++       + +       V  +   S S
Sbjct: 1567 SASESASISESQSL-SNSESASESASVSTSQSVSNSESASVSESVSESQSVSNSESASVS 1625

Query: 1630 VS-SGMQNARLRGFQGVSNTPSSSPGE 1707
             S S  ++  +   Q +SN+ S+S  E
Sbjct: 1626 ASESASESDSVSESQSLSNSESASTSE 1652