BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00015516
         (4091 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002519945.1| photosystem I P700 apoprotein A1 (chloroplas...  1442   0.0  
ref|YP_001876567.1| photosystem I P700 apoprotein A1 [Welwitschi...  1391   0.0  
dbj|BAH11238.1| photosystem I P700 apoprotein A1 (chloroplast) [...  1389   0.0  
sp|Q9MUJ8.1|PSAA_EPHTW RecName: Full=Photosystem I P700 chloroph...  1385   0.0  
ref|YP_002519792.1| photosystem I P700 apoprotein A1 [Gnetum par...  1374   0.0  
gb|AER45618.1| psaA (chloroplast) [Agathis australis]                1372   0.0  
gb|AET44557.1| photosystem I P700 chlorophyll a apoprotein A1 (c...  1370   0.0  
ref|YP_008965030.1| photosystem I P700 apoprotein A1 (chloroplas...  1370   0.0  
gb|AET44987.1| photosystem I P700 chlorophyll a apoprotein A1 (c...  1370   0.0  
gb|AET45628.1| photosystem I P700 chlorophyll a apoprotein A1 (c...  1369   0.0  
ref|NP_817251.1| photosystem I P700 chlorophyll a apoprotein A1 ...  1369   0.0  
ref|YP_007890243.1| photosystem I P700 apoprotein A1 (chloroplas...  1368   0.0  
gb|AET47276.1| photosystem I P700 chlorophyll a apoprotein A1 (c...  1367   0.0  
ref|YP_004891359.1| photosystem I P700 apoprotein A1 (chloroplas...  1366   0.0  
ref|YP_008082855.1| photosystem I P700 apoprotein A1 (chloroplas...  1365   0.0  
ref|YP_003934159.1| photosystem I P700 apoprotein A1 [Cedrus deo...  1365   0.0  
dbj|BAF64868.1| photosystem I P700 chlorophyll a apoprotein A1 [...  1365   0.0  
dbj|BAN16915.1| photosystem I P700 apoprotein A1 (chloroplast) [...  1365   0.0  
gb|AET46274.1| photosystem I P700 chlorophyll a apoprotein A1 (c...  1365   0.0  
gb|AET46413.1| photosystem I P700 chlorophyll a apoprotein A1 (c...  1364   0.0  

>ref|YP_002519945.1| photosystem I P700 apoprotein A1 (chloroplast) [Ephedra equisetina]
            gi|220983546|dbj|BAH11313.1| photosystem I P700
            apoprotein A1 (chloroplast) [Ephedra equisetina]
          Length = 750

 Score = 1442 bits (3734), Expect = 0.0
 Identities = 700/750 (93%), Positives = 702/750 (93%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH
Sbjct: 1    MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 60

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV
Sbjct: 61   TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 120

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFF IWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH
Sbjct: 121  GQEILNGDVGGGFRGIQITSGFFPIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 180

Query: 1060 KAAPKLSWFQVESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHEF 1239
            KAAPKLSWFQVESMLNHH              HQVHVSLPINQLLDAGVDPKEIPLPHEF
Sbjct: 181  KAAPKLSWFQVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQLLDAGVDPKEIPLPHEF 240

Query: 1240 ILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIAV 1419
            ILNRDLL+QLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIAV
Sbjct: 241  ILNRDLLIQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIAV 300

Query: 1420 IFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGSL 1599
            IFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGSL
Sbjct: 301  IFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGSL 360

Query: 1600 TIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTSY 1779
            TIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMW                LVRDYDSTTSY
Sbjct: 361  TIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFVIIGAAAHAAIFLVRDYDSTTSY 420

Query: 1780 NNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIF 1959
            NNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIF
Sbjct: 421  NNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIF 480

Query: 1960 AQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAFT 2139
            AQW+QNTHV                 WGGNDLVTVGTKVALLPIPLGTADFLVHHIHAFT
Sbjct: 481  AQWVQNTHVTAPRFTAPAATASTSFTWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAFT 540

Query: 2140 IHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNA 2319
            IHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNA
Sbjct: 541  IHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNA 600

Query: 2320 ISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQSY 2499
            ISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQSY
Sbjct: 601  ISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQSY 660

Query: 2500 GSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIV 2679
            GSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIV
Sbjct: 661  GSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIV 720

Query: 2680 QGRAVGVAHYLLGGIVTTWSFFLARIIAVE 2769
            QGRAVGVAHYLLGGIVTTWSFFLARIIAVE
Sbjct: 721  QGRAVGVAHYLLGGIVTTWSFFLARIIAVE 750



 Score =  347 bits (891), Expect = 2e-92
 Identities = 200/468 (42%), Positives = 275/468 (58%), Gaps = 30/468 (6%)
 Frame = +3

Query: 2775 ADVTIMISRFP------------KFSQGLSQ-DP-TTRRIWFGIATAHDFESHDDITEEQ 2912
            ++V IM+ R P             FS+ L++ DP TT  IW   A AHDF+SH +  EE 
Sbjct: 8    SEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSHTEDLEE- 66

Query: 2913 LYQQIFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAI 3092
            + ++IF++HFGQLAIIF+W SG  FH A   N+E W+ DP H++P A  +W P  GQ  +
Sbjct: 67   ISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVW-PIVGQEIL 125

Query: 3093 EAFTRGSAPGPVNIAYSGLYQWWYTVGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKR 3272
                 G   G + I  SG +  W   G+ +   LY  A+  +  + + L AG FH   K 
Sbjct: 126  NGDVGGGFRG-IQIT-SGFFPIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH-KA 182

Query: 3273 KPSISWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPESR----GIHVRWVNF----- 3425
             P +SWF+  ES LNHHL+GL G+ SL+W GH VHV++P ++    G+  + +       
Sbjct: 183  APKLSWFQ-VESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQLLDAGVDPKEIPLPHEFI 241

Query: 3426 ----LSVLPYP---QGLGPLFSGQWNLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQT 3584
                L +  YP   +GL P F+  W+ YS+       L                  +P T
Sbjct: 242  LNRDLLIQLYPSFSKGLTPFFTLNWSEYSEILTFRGGL------------------NPIT 283

Query: 3585 QSLWLTDIAHHHLAIALIFFLAGHMYRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNT 3764
              LWLTDI HHHLAIA+IF +AGHMY+TN+GIGHSI++ILEAH  P    G GHK LY  
Sbjct: 284  GGLWLTDIVHHHLAIAVIFLIAGHMYKTNWGIGHSIQEILEAHKGPF--TGEGHKGLYEI 341

Query: 3765 INNSLHFQLGLALASLGVITSLVAQHMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTG 3944
            +  S H QL L LA LG +T +VA HMYS+P Y +LA D+ TQ +L+ HH +I GF++ G
Sbjct: 342  LTTSWHAQLALNLAILGSLTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFVIIG 401

Query: 3945 AFAHGAIFFIRDYNPEQNQDNVLERILDHKEAIISHLSWVSLFLGFHT 4088
            A AH AIF +RDY+   + +N+ +R+L H++AIISHL+W  +FLGFH+
Sbjct: 402  AAAHAAIFLVRDYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHS 449


>ref|YP_001876567.1| photosystem I P700 apoprotein A1 [Welwitschia mirabilis]
            gi|205803606|sp|Q9MUK2.2|PSAA_WELMI RecName:
            Full=Photosystem I P700 chlorophyll a apoprotein A1;
            AltName: Full=PSI-A; AltName: Full=PsaA
            gi|163311622|gb|ABY26780.1| photosystem I P700 apoprotein
            A1 [Welwitschia mirabilis]
          Length = 751

 Score = 1391 bits (3600), Expect = 0.0
 Identities = 669/751 (89%), Positives = 688/751 (91%), Gaps = 1/751 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSPESEVKI+VERDPIKTSFEKWANPGHFS+TL+K DPETTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPESEVKIVVERDPIKTSFEKWANPGHFSKTLSKTDPETTTWIWNLHADAHDFDSH 60

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            TEDLEEISRK+FSAHFGQLAIIF WLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV
Sbjct: 61   TEDLEEISRKVFSAHFGQLAIIFTWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 120

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFF IWRASGITSELQLYCTAIG LIFAALMLFAGWFHYH
Sbjct: 121  GQEILNGDVGGGFRGIQITSGFFPIWRASGITSELQLYCTAIGALIFAALMLFAGWFHYH 180

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAPKL+WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 181  KAAPKLAWFQQVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHE 240

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYPSF++GL PFFTLNWSEYSEILTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 241  FILNRDLLNQLYPSFAQGLLPFFTLNWSEYSEILTFRGGLNPVTGGLWLTDTAHHHLAIA 300

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+FLIAGHMYKTNWGIGHS++EILEAHKGPFTGEGHKGLYEILT SWHAQLALNLA+LGS
Sbjct: 301  VLFLIAGHMYKTNWGIGHSLKEILEAHKGPFTGEGHKGLYEILTNSWHAQLALNLAMLGS 360

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTI+VAHHMYSMPPYPYLAIDY TQLSLFTHHMW                LVRDYDSTTS
Sbjct: 361  LTIIVAHHMYSMPPYPYLAIDYSTQLSLFTHHMWIGGFIIVGAAAHAAIFLVRDYDSTTS 420

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI
Sbjct: 421  YNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 480

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQWLQNTHV                 WGG D++TVG KVALLPIPLGTADFLVHHIHAF
Sbjct: 481  FAQWLQNTHVTAPSFTAPAATASTSLTWGGGDIITVGNKVALLPIPLGTADFLVHHIHAF 540

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 541  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 600

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 601  AISVVIFHFSWKMQSDVWGNISKQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 660

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 661  YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 720

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAVE 2769
            VQGRAVGVAHYLLGGIVTTW+FFLARIIAVE
Sbjct: 721  VQGRAVGVAHYLLGGIVTTWAFFLARIIAVE 751



 Score =  358 bits (918), Expect = 1e-95
 Identities = 198/445 (44%), Positives = 272/445 (61%), Gaps = 19/445 (4%)
 Frame = +3

Query: 2811 FSQGLSQ-DP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNL 2984
            FS+ LS+ DP TT  IW   A AHDF+SH +  EE + +++F++HFGQLAIIF W SG  
Sbjct: 32   FSKTLSKTDPETTTWIWNLHADAHDFDSHTEDLEE-ISRKVFSAHFGQLAIIFTWLSGMY 90

Query: 2985 FHVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWY 3164
            FH A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +  W 
Sbjct: 91   FHGARFSNYEAWLADPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFPIWR 147

Query: 3165 TVGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGV 3344
              G+ +   LY  A+  +  + + L AG FH   K  P ++WF+  ES LNHHL+GL G+
Sbjct: 148  ASGITSELQLYCTAIGALIFAALMLFAGWFHYH-KAAPKLAWFQQVESMLNHHLAGLLGL 206

Query: 3345 SSLAWTGHLVHVAIPESR----GIHVRWV----------NFLSVLPYP---QGLGPLFSG 3473
             SL+W GH +HV++P ++    G+  + +          + L+ L YP   QGL P F+ 
Sbjct: 207  GSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLNQL-YPSFAQGLLPFFTL 265

Query: 3474 QWNLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAG 3653
             W+ YS+       L                  +P T  LWLTD AHHHLAIA++F +AG
Sbjct: 266  NWSEYSEILTFRGGL------------------NPVTGGLWLTDTAHHHLAIAVLFLIAG 307

Query: 3654 HMYRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLV 3833
            HMY+TN+GIGHS+K+ILEAH  P    G GHK LY  + NS H QL L LA LG +T +V
Sbjct: 308  HMYKTNWGIGHSLKEILEAHKGPF--TGEGHKGLYEILTNSWHAQLALNLAMLGSLTIIV 365

Query: 3834 AQHMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVL 4013
            A HMYS+P Y +LA D++TQ +L+ HH +I GFI+ GA AH AIF +RDY+   + +N+L
Sbjct: 366  AHHMYSMPPYPYLAIDYSTQLSLFTHHMWIGGFIIVGAAAHAAIFLVRDYDSTTSYNNLL 425

Query: 4014 ERILDHKEAIISHLSWVSLFLGFHT 4088
            +R+L H++AIISHL+WV +FLGFH+
Sbjct: 426  DRVLRHRDAIISHLNWVCIFLGFHS 450


>dbj|BAH11238.1| photosystem I P700 apoprotein A1 (chloroplast) [Welwitschia
            mirabilis]
          Length = 751

 Score = 1389 bits (3594), Expect = 0.0
 Identities = 668/751 (88%), Positives = 687/751 (91%), Gaps = 1/751 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSPESEVKI+VERDPIKTSFEKWANPGHFS+TL+K DPETTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPESEVKIVVERDPIKTSFEKWANPGHFSKTLSKTDPETTTWIWNLHADAHDFDSH 60

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            TEDLEEISRK+FSAHFGQLAIIF WLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV
Sbjct: 61   TEDLEEISRKVFSAHFGQLAIIFTWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 120

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFF IWRASGITSELQLYCTAIG LIFAALMLFAGWFHYH
Sbjct: 121  GQEILNGDVGGGFRGIQITSGFFPIWRASGITSELQLYCTAIGALIFAALMLFAGWFHYH 180

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAPKL+WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 181  KAAPKLAWFQQVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHE 240

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYPSF++GL PFFTLNWSEYSEILTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 241  FILNRDLLNQLYPSFAQGLLPFFTLNWSEYSEILTFRGGLNPVTGGLWLTDTAHHHLAIA 300

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+FLIAGHMYKTNWGIGHS++EILEAHKGPFTGEGHKGLYEILT SWHAQLALNLA+LGS
Sbjct: 301  VLFLIAGHMYKTNWGIGHSLKEILEAHKGPFTGEGHKGLYEILTNSWHAQLALNLAMLGS 360

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTI+VAHHMYSMPPYPYLAIDY TQLSLFTHHMW                LVRDYDSTTS
Sbjct: 361  LTIIVAHHMYSMPPYPYLAIDYSTQLSLFTHHMWIGGFIIVGAAAHAAIFLVRDYDSTTS 420

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQD FSDTAIQLQPI
Sbjct: 421  YNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDTFSDTAIQLQPI 480

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQWLQNTHV                 WGG D++TVG KVALLPIPLGTADFLVHHIHAF
Sbjct: 481  FAQWLQNTHVTAPSFTAPAATASTSLTWGGGDIITVGNKVALLPIPLGTADFLVHHIHAF 540

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 541  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 600

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 601  AISVVIFHFSWKMQSDVWGNISKQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 660

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 661  YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 720

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAVE 2769
            VQGRAVGVAHYLLGGIVTTW+FFLARIIAVE
Sbjct: 721  VQGRAVGVAHYLLGGIVTTWAFFLARIIAVE 751



 Score =  358 bits (918), Expect = 1e-95
 Identities = 198/445 (44%), Positives = 272/445 (61%), Gaps = 19/445 (4%)
 Frame = +3

Query: 2811 FSQGLSQ-DP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNL 2984
            FS+ LS+ DP TT  IW   A AHDF+SH +  EE + +++F++HFGQLAIIF W SG  
Sbjct: 32   FSKTLSKTDPETTTWIWNLHADAHDFDSHTEDLEE-ISRKVFSAHFGQLAIIFTWLSGMY 90

Query: 2985 FHVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWY 3164
            FH A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +  W 
Sbjct: 91   FHGARFSNYEAWLADPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFPIWR 147

Query: 3165 TVGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGV 3344
              G+ +   LY  A+  +  + + L AG FH   K  P ++WF+  ES LNHHL+GL G+
Sbjct: 148  ASGITSELQLYCTAIGALIFAALMLFAGWFHYH-KAAPKLAWFQQVESMLNHHLAGLLGL 206

Query: 3345 SSLAWTGHLVHVAIPESR----GIHVRWV----------NFLSVLPYP---QGLGPLFSG 3473
             SL+W GH +HV++P ++    G+  + +          + L+ L YP   QGL P F+ 
Sbjct: 207  GSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLNQL-YPSFAQGLLPFFTL 265

Query: 3474 QWNLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAG 3653
             W+ YS+       L                  +P T  LWLTD AHHHLAIA++F +AG
Sbjct: 266  NWSEYSEILTFRGGL------------------NPVTGGLWLTDTAHHHLAIAVLFLIAG 307

Query: 3654 HMYRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLV 3833
            HMY+TN+GIGHS+K+ILEAH  P    G GHK LY  + NS H QL L LA LG +T +V
Sbjct: 308  HMYKTNWGIGHSLKEILEAHKGPF--TGEGHKGLYEILTNSWHAQLALNLAMLGSLTIIV 365

Query: 3834 AQHMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVL 4013
            A HMYS+P Y +LA D++TQ +L+ HH +I GFI+ GA AH AIF +RDY+   + +N+L
Sbjct: 366  AHHMYSMPPYPYLAIDYSTQLSLFTHHMWIGGFIIVGAAAHAAIFLVRDYDSTTSYNNLL 425

Query: 4014 ERILDHKEAIISHLSWVSLFLGFHT 4088
            +R+L H++AIISHL+WV +FLGFH+
Sbjct: 426  DRVLRHRDAIISHLNWVCIFLGFHS 450


>sp|Q9MUJ8.1|PSAA_EPHTW RecName: Full=Photosystem I P700 chlorophyll a apoprotein A1;
            AltName: Full=PSI-A; AltName: Full=PsaA
            gi|6856193|gb|AAF29818.1| photosystem I P700 apoprotein
            A1 [Ephedra tweediana]
          Length = 720

 Score = 1385 bits (3586), Expect = 0.0
 Identities = 670/720 (93%), Positives = 672/720 (93%)
 Frame = +1

Query: 547  VKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSHTEDLEEISR 726
            +KIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSHTEDLEEISR
Sbjct: 1    IKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSHTEDLEEISR 60

Query: 727  KIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIVGQEILNGDV 906
            KIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIVGQEILNGDV
Sbjct: 61   KIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIVGQEILNGDV 120

Query: 907  GGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYHKAAPKLSWF 1086
            GGGFRGIQITSGFF IWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYHKAAPKLSWF
Sbjct: 121  GGGFRGIQITSGFFPIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYHKAAPKLSWF 180

Query: 1087 QVESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLVQ 1266
            QVESMLNHH              HQVHVSLPINQLLDAGVDPKEIPLPHEFILNRDLL+Q
Sbjct: 181  QVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLIQ 240

Query: 1267 LYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIAVIFLIAGHMY 1446
            LYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIAVIFLIAGHMY
Sbjct: 241  LYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIAVIFLIAGHMY 300

Query: 1447 KTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGSLTIVVAHHMY 1626
            KTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGSLTIVVAHHMY
Sbjct: 301  KTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGSLTIVVAHHMY 360

Query: 1627 SMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTSYNNLFDRVLR 1806
            SMPPYPYLAIDYGTQLSLFTHHMW                LVRDYDSTTSYNNLFDRVLR
Sbjct: 361  SMPPYPYLAIDYGTQLSLFTHHMWIGGFVIIGAAAHAAIFLVRDYDSTTSYNNLFDRVLR 420

Query: 1807 HRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIFAQWLQNTHV 1986
            HRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIFAQWLQNTHV
Sbjct: 421  HRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIFAQWLQNTHV 480

Query: 1987 XXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAFTIHVTVLILL 2166
                             WGGNDLVTVGTKVALLPIPLGTADFLVHHIHAFTIHVTVLILL
Sbjct: 481  TAPRFTAPAATASTSFTWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAFTIHVTVLILL 540

Query: 2167 KGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFHFS 2346
            KGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFHFS
Sbjct: 541  KGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFHFS 600

Query: 2347 WKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQSYGSALSAYGL 2526
            WKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQSYGSALSAYGL
Sbjct: 601  WKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQSYGSALSAYGL 660

Query: 2527 FFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIVQGRAVGVAH 2706
            FFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIVQGRAVGVAH
Sbjct: 661  FFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIVQGRAVGVAH 720



 Score =  346 bits (888), Expect = 4e-92
 Identities = 195/444 (43%), Positives = 267/444 (60%), Gaps = 18/444 (4%)
 Frame = +3

Query: 2811 FSQGLSQ-DP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNL 2984
            FS+ L++ DP TT  IW   A AHDF+SH +  EE + ++IF++HFGQLAIIF+W SG  
Sbjct: 23   FSRTLAKGDPETTTWIWNLHADAHDFDSHTEDLEE-ISRKIFSAHFGQLAIIFIWLSGMY 81

Query: 2985 FHVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWY 3164
            FH A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +  W 
Sbjct: 82   FHGARFSNYEAWLADPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFPIWR 138

Query: 3165 TVGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGV 3344
              G+ +   LY  A+  +  + + L AG FH   K  P +SWF+  ES LNHHL+GL G+
Sbjct: 139  ASGITSELQLYCTAIGGLIFAALMLFAGWFHYH-KAAPKLSWFQ-VESMLNHHLAGLLGL 196

Query: 3345 SSLAWTGHLVHVAIPESR----GIHVRWVNF---------LSVLPYP---QGLGPLFSGQ 3476
             SL+W GH VHV++P ++    G+  + +           L +  YP   +GL P F+  
Sbjct: 197  GSLSWAGHQVHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLIQLYPSFSKGLTPFFTLN 256

Query: 3477 WNLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGH 3656
            W+ YS+       L                  +P T  LWLTDI HHHLAIA+IF +AGH
Sbjct: 257  WSEYSEILTFRGGL------------------NPITGGLWLTDIVHHHLAIAVIFLIAGH 298

Query: 3657 MYRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVA 3836
            MY+TN+GIGHSI++ILEAH  P    G GHK LY  +  S H QL L LA LG +T +VA
Sbjct: 299  MYKTNWGIGHSIQEILEAHKGPF--TGEGHKGLYEILTTSWHAQLALNLAILGSLTIVVA 356

Query: 3837 QHMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLE 4016
             HMYS+P Y +LA D+ TQ +L+ HH +I GF++ GA AH AIF +RDY+   + +N+ +
Sbjct: 357  HHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFVIIGAAAHAAIFLVRDYDSTTSYNNLFD 416

Query: 4017 RILDHKEAIISHLSWVSLFLGFHT 4088
            R+L H++AIISHL+W  +FLGFH+
Sbjct: 417  RVLRHRDAIISHLNWTCIFLGFHS 440


>ref|YP_002519792.1| photosystem I P700 apoprotein A1 [Gnetum parvifolium]
            gi|512721565|ref|YP_008082185.1| photosystem I P700
            apoprotein A1 (chloroplast) [Gnetum montanum]
            gi|220983535|dbj|BAH11303.1| photosystem I P700
            apoprotein A1 (chloroplast) [Gnetum parvifolium]
            gi|490345010|gb|AGL11030.1| photosystem I P700 apoprotein
            A1 (chloroplast) [Gnetum montanum]
          Length = 757

 Score = 1374 bits (3556), Expect = 0.0
 Identities = 660/757 (87%), Positives = 688/757 (90%), Gaps = 1/757 (0%)
 Frame = +1

Query: 502  LTKENSMIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADA 681
            + KENSMI+RSPESEVKI+VE+D I+TSFEKWANPGHFS+TL+KGDPETTTWIWNLHADA
Sbjct: 1    MNKENSMIIRSPESEVKIVVEKDLIRTSFEKWANPGHFSKTLSKGDPETTTWIWNLHADA 60

Query: 682  HDFDSHTEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQ 861
            HDFDSHTEDLEEISRK+FSAHFGQLAII  WLSGMYFHGARFSNYEAWLADP  IKPSAQ
Sbjct: 61   HDFDSHTEDLEEISRKVFSAHFGQLAIILTWLSGMYFHGARFSNYEAWLADPVRIKPSAQ 120

Query: 862  VVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFA 1041
            VVWPIVGQEILNGDVGGGFRGIQITSGFF IWRA+GIT+ELQLYCTAIG LI AALMLFA
Sbjct: 121  VVWPIVGQEILNGDVGGGFRGIQITSGFFPIWRAAGITNELQLYCTAIGALILAALMLFA 180

Query: 1042 GWFHYHKAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKE 1218
            GWFHYHKAAPKL WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKE
Sbjct: 181  GWFHYHKAAPKLVWFQQVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKE 240

Query: 1219 IPLPHEFILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVH 1398
            IPLPHEFILNRDLL QLYP+F+KGL PFFTL+WSEYSEILTFRGGLNPITGGLWLTD  H
Sbjct: 241  IPLPHEFILNRDLLNQLYPNFAKGLIPFFTLDWSEYSEILTFRGGLNPITGGLWLTDTAH 300

Query: 1399 HHLAIAVIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALN 1578
            HHLAIAV+F+IAGHMY+TNWGIGHS+++ILEAHKGPFTGEGHKGLYEILTTSWHAQLA+N
Sbjct: 301  HHLAIAVLFIIAGHMYRTNWGIGHSLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLAIN 360

Query: 1579 LAILGSLTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRD 1758
            LA+LGSLTI+VAHHMYSMPPYPYLAIDYGTQLSLFTHH+W                LVRD
Sbjct: 361  LALLGSLTIIVAHHMYSMPPYPYLAIDYGTQLSLFTHHLWIGGFIIVGAAAHAAIFLVRD 420

Query: 1759 YDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTA 1938
            YDSTTSYNNL DRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTA
Sbjct: 421  YDSTTSYNNLLDRVLRHRDAIISHLNWICIFLGFHSFGLYIHNDTMSALGRPQDMFSDTA 480

Query: 1939 IQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLV 2118
            IQLQPIFAQW+QNTHV                 WGG DLVTVGTKVALLPI LGTADFLV
Sbjct: 481  IQLQPIFAQWIQNTHVTAPNLTAPAATASTSLTWGGGDLVTVGTKVALLPIQLGTADFLV 540

Query: 2119 HHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLG 2298
            HHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLG
Sbjct: 541  HHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLG 600

Query: 2299 LFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQA 2478
            LFWMYN+ISVVIFHFSWKMQSDVWG I+ QGVVTHITGGNFAQSSVTINGWLRDFLWAQA
Sbjct: 601  LFWMYNSISVVIFHFSWKMQSDVWGTINDQGVVTHITGGNFAQSSVTINGWLRDFLWAQA 660

Query: 2479 SQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQ 2658
            SQVIQSYGSALSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQ
Sbjct: 661  SQVIQSYGSALSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQ 720

Query: 2659 PRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAVE 2769
            PRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAVE
Sbjct: 721  PRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAVE 757



 Score =  352 bits (903), Expect = 8e-94
 Identities = 201/481 (41%), Positives = 283/481 (58%), Gaps = 25/481 (5%)
 Frame = +3

Query: 2721 NCHNMVVLPSKNYCSRIIADVTIMISRFPK------FSQGLSQ-DP-TTRRIWFGIATAH 2876
            N  N +++ S     +I+ +  ++ + F K      FS+ LS+ DP TT  IW   A AH
Sbjct: 2    NKENSMIIRSPESEVKIVVEKDLIRTSFEKWANPGHFSKTLSKGDPETTTWIWNLHADAH 61

Query: 2877 DFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPLHVRPIAH 3056
            DF+SH +  EE + +++F++HFGQLAII  W SG  FH A   N+E W+ DP+ ++P A 
Sbjct: 62   DFDSHTEDLEE-ISRKVFSAHFGQLAIILTWLSGMYFHGARFSNYEAWLADPVRIKPSAQ 120

Query: 3057 AIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYTVGLRTNEDLYTGALFLIFLSTVF 3236
             +W P  GQ  +     G   G + I  SG +  W   G+     LY  A+  + L+ + 
Sbjct: 121  VVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFPIWRAAGITNELQLYCTAIGALILAALM 177

Query: 3237 LIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPESR----GI 3404
            L AG FH   K  P + WF+  ES LNHHL+GL G+ SL+W GH +HV++P ++    G+
Sbjct: 178  LFAGWFHYH-KAAPKLVWFQQVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGV 236

Query: 3405 HVRWV----------NFLSVLPYP---QGLGPLFSGQWNLYSQNPDSNSHLFGTSQXXXX 3545
              + +          + L+ L YP   +GL P F+  W+ YS+       L         
Sbjct: 237  DPKEIPLPHEFILNRDLLNQL-YPNFAKGLIPFFTLDWSEYSEILTFRGGL--------- 286

Query: 3546 XXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHMYRTNFGIGHSIKDILEAHMPPG 3725
                     +P T  LWLTD AHHHLAIA++F +AGHMYRTN+GIGHS+KDILEAH  P 
Sbjct: 287  ---------NPITGGLWLTDTAHHHLAIAVLFIIAGHMYRTNWGIGHSLKDILEAHKGPF 337

Query: 3726 GKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQHMYSLPAYAFLAQDFTTQAALY 3905
               G GHK LY  +  S H QL + LA LG +T +VA HMYS+P Y +LA D+ TQ +L+
Sbjct: 338  --TGEGHKGLYEILTTSWHAQLAINLALLGSLTIIVAHHMYSMPPYPYLAIDYGTQLSLF 395

Query: 3906 AHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLERILDHKEAIISHLSWVSLFLGFH 4085
             HH +I GFI+ GA AH AIF +RDY+   + +N+L+R+L H++AIISHL+W+ +FLGFH
Sbjct: 396  THHLWIGGFIIVGAAAHAAIFLVRDYDSTTSYNNLLDRVLRHRDAIISHLNWICIFLGFH 455

Query: 4086 T 4088
            +
Sbjct: 456  S 456


>gb|AER45618.1| psaA (chloroplast) [Agathis australis]
          Length = 750

 Score = 1372 bits (3552), Expect = 0.0
 Identities = 658/750 (87%), Positives = 683/750 (91%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSPE EVKI+VERDPIKTSFEKWA PGHFS+TL+KG P TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPEPEVKIVVERDPIKTSFEKWAKPGHFSKTLSKG-PNTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T+DLEEISRK+FSAHFGQLAIIFIWLSGMY+HGARFSNYEAWL+DPTHIKPSAQVVWPIV
Sbjct: 60   TDDLEEISRKVFSAHFGQLAIIFIWLSGMYYHGARFSNYEAWLSDPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAPKL+WFQ VESMLNHH              HQVHVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPKLAWFQDVESMLNHHLAGLLGLGSLAWAGHQVHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYPSF+KGLTPFFTLNWSEYS+ LTFRGGLNP+TGGLWLTD VHHHLAIA
Sbjct: 240  FILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTVHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            ++FLIAGHMYKTNW IGHS+++ILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLA+LGS
Sbjct: 300  ILFLIAGHMYKTNWSIGHSLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAMLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLV VG KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPSLTAPDATASTSLTWGGGDLVAVGNKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            VQGRAVGVAHYLLGGI TTW+FFLARIIAV
Sbjct: 720  VQGRAVGVAHYLLGGIATTWAFFLARIIAV 749



 Score =  360 bits (923), Expect = 4e-96
 Identities = 195/443 (44%), Positives = 267/443 (60%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ LS+ P TT  IW   A AHDF+SH D  EE + +++F++HFGQLAIIF+W SG  +
Sbjct: 32   FSKTLSKGPNTTTWIWNLHADAHDFDSHTDDLEE-ISRKVFSAHFGQLAIIFIWLSGMYY 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W++DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLSDPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQIWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGGLIFAALMLFAGWFHYH-KAAPKLAWFQDVESMLNHHLAGLLGLG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWVNF---------LSVLPYP---QGLGPLFSGQW 3479
            SLAW GH VHV++P ++    G+  + +           L    YP   +GL P F+  W
Sbjct: 207  SLAWAGHQVHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLAQLYPSFAKGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS        L                  +P T  LWLTD  HHHLAIA++F +AGHM
Sbjct: 267  SEYSDFLTFRGGL------------------NPVTGGLWLTDTVHHHLAIAILFLIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            Y+TN+ IGHS+KDILEAH  P    G GHK LY  +  S H QL L LA LG +T +VA 
Sbjct: 309  YKTNWSIGHSLKDILEAHKGPF--TGEGHKGLYEILTTSWHAQLALNLAMLGSLTIVVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMYS+P Y +LA D+ TQ +L+ HH +I GF++ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AI+SHL+WV +FLGFH+
Sbjct: 427  VLRHRDAIVSHLNWVCIFLGFHS 449


>gb|AET44557.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            chiapensis] gi|356996859|gb|AET44773.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            bungeana]
          Length = 750

 Score = 1370 bits (3546), Expect = 0.0
 Identities = 656/750 (87%), Positives = 685/750 (91%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSP+ EVKI+VERDP+KTSFEKWA PGHFS+TLAKG P+TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPKPEVKIVVERDPVKTSFEKWAKPGHFSKTLAKG-PDTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T+DLEEISRK+FSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV
Sbjct: 60   TKDLEEISRKVFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIG LIFAALMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGALIFAALMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAP+L+WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPELAWFQDVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYPSF+KGLTPFFTLNWSEYS+ LTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 240  FILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTAHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+FLIAGHMYKTNW IGH++++ILEAHKGPFTGEGHKGLYEILTTSWHAQLA+NLA+LGS
Sbjct: 300  VLFLIAGHMYKTNWRIGHNLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLAMLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            VQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 720  VQGRAVGVAHYLLGGIVTTWAFFLARIIAV 749



 Score =  355 bits (910), Expect = 1e-94
 Identities = 192/443 (43%), Positives = 266/443 (60%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ L++ P TT  IW   A AHDF+SH    EE + +++F++HFGQLAIIF+W SG  F
Sbjct: 32   FSKTLAKGPDTTTWIWNLHADAHDFDSHTKDLEE-ISRKVFSAHFGQLAIIFIWLSGMYF 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLADPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQIWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGALIFAALMLFAGWFHYH-KAAPELAWFQDVESMLNHHLAGLLGLG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWVNF---------LSVLPYP---QGLGPLFSGQW 3479
            SL+W GH +HV++P ++    G+  + +           L    YP   +GL P F+  W
Sbjct: 207  SLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLAQLYPSFAKGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS        L                  +P T  LWLTD AHHHLAIA++F +AGHM
Sbjct: 267  SEYSDFLTFRGGL------------------NPVTGGLWLTDTAHHHLAIAVLFLIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            Y+TN+ IGH++KDILEAH  P    G GHK LY  +  S H QL + LA LG +T +VA 
Sbjct: 309  YKTNWRIGHNLKDILEAHKGPF--TGEGHKGLYEILTTSWHAQLAINLAMLGSLTIVVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMYS+P Y +LA D+ TQ +L+ HH +I GFI+ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AI+SHL+WV +FLGFH+
Sbjct: 427  VLRHRDAIVSHLNWVCIFLGFHS 449


>ref|YP_008965030.1| photosystem I P700 apoprotein A1 (chloroplast) [Agathis dammara]
            gi|347977298|dbj|BAK86766.1| photosystem I P700
            apoprotein A1 (chloroplast) [Agathis dammara]
            gi|563317614|dbj|BAO19714.1| photosystem I P700
            apoprotein A1 (chloroplast) [Agathis dammara]
          Length = 750

 Score = 1370 bits (3546), Expect = 0.0
 Identities = 657/750 (87%), Positives = 682/750 (90%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSPE EVKI+VERDPIKTSFEKWA PGHFS+TL+KG P TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPEPEVKIVVERDPIKTSFEKWAKPGHFSKTLSKG-PNTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T+DLEEISRK+FSAHFGQLAII IWLSGMY+HGARFSNYEAWL+DPTHIKPSAQVVWPIV
Sbjct: 60   TDDLEEISRKVFSAHFGQLAIILIWLSGMYYHGARFSNYEAWLSDPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAPKL+WFQ VESMLNHH              HQVHVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYPSF+KGLTPFFTLNWSEYS+ LTFRGGLNP+TGGLWLTD VHHHLAIA
Sbjct: 240  FILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTVHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            ++FLIAGHMYKTNW IGHS+++ILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLA+LGS
Sbjct: 300  ILFLIAGHMYKTNWSIGHSLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAMLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLV VG KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPSLTAPDATASTSLTWGGGDLVAVGNKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            VQGRAVGVAHYLLGGI TTW+FFLARIIAV
Sbjct: 720  VQGRAVGVAHYLLGGIATTWAFFLARIIAV 749



 Score =  356 bits (914), Expect = 4e-95
 Identities = 193/443 (43%), Positives = 266/443 (60%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ LS+ P TT  IW   A AHDF+SH D  EE + +++F++HFGQLAII +W SG  +
Sbjct: 32   FSKTLSKGPNTTTWIWNLHADAHDFDSHTDDLEE-ISRKVFSAHFGQLAIILIWLSGMYY 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W++DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLSDPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQIWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGGLIFAALMLFAGWFHYH-KAAPKLAWFQDVESMLNHHLAGLLGLG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWVNF---------LSVLPYP---QGLGPLFSGQW 3479
            SL+W GH VHV++P ++    G+  + +           L    YP   +GL P F+  W
Sbjct: 207  SLSWAGHQVHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLAQLYPSFAKGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS        L                  +P T  LWLTD  HHHLAIA++F +AGHM
Sbjct: 267  SEYSDFLTFRGGL------------------NPVTGGLWLTDTVHHHLAIAILFLIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            Y+TN+ IGHS+KDILEAH  P    G GHK LY  +  S H QL L LA LG +T +VA 
Sbjct: 309  YKTNWSIGHSLKDILEAHKGPF--TGEGHKGLYEILTTSWHAQLALNLAMLGSLTIVVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMYS+P Y +LA D+ TQ +L+ HH +I GF++ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AI+SHL+WV +FLGFH+
Sbjct: 427  VLRHRDAIVSHLNWVCIFLGFHS 449


>gb|AET44987.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            amamiana] gi|356997291|gb|AET45199.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            kwangtungensis] gi|356997363|gb|AET45270.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            wallichiana] gi|357001514|gb|AET49364.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            dalatensis] gi|357001583|gb|AET49432.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            fenzeliana var. dabeshanensis]
          Length = 750

 Score = 1370 bits (3545), Expect = 0.0
 Identities = 655/750 (87%), Positives = 685/750 (91%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSP+ EVKI+VERDP+KTSFEKWA PGHFS+TLAKG P+TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPKPEVKIVVERDPVKTSFEKWAKPGHFSKTLAKG-PDTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T+DLEEISRK+FSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV
Sbjct: 60   TKDLEEISRKVFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIG LIFAALMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGALIFAALMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAP+L+WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPELAWFQDVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYPSF+KGLTPFFTLNWSEYS+ LTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 240  FILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTAHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+FLIAGHMYKTNW IGH++++ILEAHKGPFTGEGHKGLYEILTTSWHAQLA+NLA+LGS
Sbjct: 300  VLFLIAGHMYKTNWRIGHNLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLAMLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTI+VAHHMYSMPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIIVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            VQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 720  VQGRAVGVAHYLLGGIVTTWAFFLARIIAV 749



 Score =  355 bits (911), Expect = 9e-95
 Identities = 192/443 (43%), Positives = 266/443 (60%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ L++ P TT  IW   A AHDF+SH    EE + +++F++HFGQLAIIF+W SG  F
Sbjct: 32   FSKTLAKGPDTTTWIWNLHADAHDFDSHTKDLEE-ISRKVFSAHFGQLAIIFIWLSGMYF 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLADPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQIWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGALIFAALMLFAGWFHYH-KAAPELAWFQDVESMLNHHLAGLLGLG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWVNF---------LSVLPYP---QGLGPLFSGQW 3479
            SL+W GH +HV++P ++    G+  + +           L    YP   +GL P F+  W
Sbjct: 207  SLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLAQLYPSFAKGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS        L                  +P T  LWLTD AHHHLAIA++F +AGHM
Sbjct: 267  SEYSDFLTFRGGL------------------NPVTGGLWLTDTAHHHLAIAVLFLIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            Y+TN+ IGH++KDILEAH  P    G GHK LY  +  S H QL + LA LG +T +VA 
Sbjct: 309  YKTNWRIGHNLKDILEAHKGPF--TGEGHKGLYEILTTSWHAQLAINLAMLGSLTIIVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMYS+P Y +LA D+ TQ +L+ HH +I GFI+ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AI+SHL+WV +FLGFH+
Sbjct: 427  VLRHRDAIVSHLNWVCIFLGFHS 449


>gb|AET45628.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            strobiformis]
          Length = 750

 Score = 1369 bits (3544), Expect = 0.0
 Identities = 655/750 (87%), Positives = 685/750 (91%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSP+ EVKI+VERDP+KTSFEKWA PGHFS+TLAKG P+TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPKPEVKIVVERDPVKTSFEKWAKPGHFSKTLAKG-PDTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T+DLEEISRK+FSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV
Sbjct: 60   TKDLEEISRKVFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQ+WRASGITSELQLYCTAIG LIFAALMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQLWRASGITSELQLYCTAIGALIFAALMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAP+L+WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPELAWFQDVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYPSF+KGLTPFFTLNWSEYS+ LTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 240  FILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTAHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+FLIAGHMYKTNW IGH++++ILEAHKGPFTGEGHKGLYEILTTSWHAQLA+NLA+LGS
Sbjct: 300  VLFLIAGHMYKTNWRIGHNLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLAMLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            VQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 720  VQGRAVGVAHYLLGGIVTTWAFFLARIIAV 749



 Score =  355 bits (911), Expect = 9e-95
 Identities = 192/443 (43%), Positives = 266/443 (60%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ L++ P TT  IW   A AHDF+SH    EE + +++F++HFGQLAIIF+W SG  F
Sbjct: 32   FSKTLAKGPDTTTWIWNLHADAHDFDSHTKDLEE-ISRKVFSAHFGQLAIIFIWLSGMYF 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLADPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQLWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGALIFAALMLFAGWFHYH-KAAPELAWFQDVESMLNHHLAGLLGLG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWVNF---------LSVLPYP---QGLGPLFSGQW 3479
            SL+W GH +HV++P ++    G+  + +           L    YP   +GL P F+  W
Sbjct: 207  SLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLAQLYPSFAKGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS        L                  +P T  LWLTD AHHHLAIA++F +AGHM
Sbjct: 267  SEYSDFLTFRGGL------------------NPVTGGLWLTDTAHHHLAIAVLFLIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            Y+TN+ IGH++KDILEAH  P    G GHK LY  +  S H QL + LA LG +T +VA 
Sbjct: 309  YKTNWRIGHNLKDILEAHKGPF--TGEGHKGLYEILTTSWHAQLAINLAMLGSLTIVVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMYS+P Y +LA D+ TQ +L+ HH +I GFI+ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AI+SHL+WV +FLGFH+
Sbjct: 427  VLRHRDAIVSHLNWVCIFLGFHS 449


>ref|NP_817251.1| photosystem I P700 chlorophyll a apoprotein A1 [Pinus koraiensis]
            gi|33301514|sp|Q85WX3.1|PSAA_PINKO RecName:
            Full=Photosystem I P700 chlorophyll a apoprotein A1;
            AltName: Full=PSI-A; AltName: Full=PsaA
            gi|29469768|gb|AAO74096.1| PSI P700 apoprotein 1 [Pinus
            koraiensis]
          Length = 750

 Score = 1369 bits (3543), Expect = 0.0
 Identities = 654/750 (87%), Positives = 685/750 (91%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSP+ EVKI+VERDP+KTSFEKWA PGHFS+TLAKG P+TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPKPEVKIVVERDPVKTSFEKWAKPGHFSKTLAKG-PDTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T+DLEEISRK+FSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV
Sbjct: 60   TKDLEEISRKVFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQ+WRASGITSELQLYCTAIG LIFAALMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQLWRASGITSELQLYCTAIGALIFAALMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAP+L+WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPELAWFQDVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYPSF+KGLTPFFTLNWSEYS+ LTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 240  FILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTAHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+FLIAGHMYKTNW IGH++++ILEAHKGPFTGEGHKGLYEILTTSWHAQLA+NLA+LGS
Sbjct: 300  VLFLIAGHMYKTNWRIGHNLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLAMLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTI+VAHHMYSMPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIIVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            VQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 720  VQGRAVGVAHYLLGGIVTTWAFFLARIIAV 749



 Score =  355 bits (912), Expect = 7e-95
 Identities = 192/443 (43%), Positives = 266/443 (60%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ L++ P TT  IW   A AHDF+SH    EE + +++F++HFGQLAIIF+W SG  F
Sbjct: 32   FSKTLAKGPDTTTWIWNLHADAHDFDSHTKDLEE-ISRKVFSAHFGQLAIIFIWLSGMYF 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLADPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQLWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGALIFAALMLFAGWFHYH-KAAPELAWFQDVESMLNHHLAGLLGLG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWVNF---------LSVLPYP---QGLGPLFSGQW 3479
            SL+W GH +HV++P ++    G+  + +           L    YP   +GL P F+  W
Sbjct: 207  SLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLAQLYPSFAKGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS        L                  +P T  LWLTD AHHHLAIA++F +AGHM
Sbjct: 267  SEYSDFLTFRGGL------------------NPVTGGLWLTDTAHHHLAIAVLFLIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            Y+TN+ IGH++KDILEAH  P    G GHK LY  +  S H QL + LA LG +T +VA 
Sbjct: 309  YKTNWRIGHNLKDILEAHKGPF--TGEGHKGLYEILTTSWHAQLAINLAMLGSLTIIVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMYS+P Y +LA D+ TQ +L+ HH +I GFI+ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AI+SHL+WV +FLGFH+
Sbjct: 427  VLRHRDAIVSHLNWVCIFLGFHS 449


>ref|YP_007890243.1| photosystem I P700 apoprotein A1 (chloroplast) [Cephalotaxus oliveri]
            gi|429128588|gb|AFZ65604.1| photosystem I P700 apoprotein
            A1 (chloroplast) [Cephalotaxus oliveri]
          Length = 750

 Score = 1368 bits (3540), Expect = 0.0
 Identities = 656/750 (87%), Positives = 679/750 (90%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSPE EVKI+VERDPIKTSFEKWA PGHFS+TLAKG P TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPEPEVKIVVERDPIKTSFEKWAKPGHFSKTLAKG-PNTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T DLEEISRK+FSAHFGQLAIIFIWLSGMYFHGARFSNYEAWL DPTHIKPSAQVVWPIV
Sbjct: 60   TNDLEEISRKVFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLGDPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIG LIFAALMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGALIFAALMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAPKL+WFQ VESMLNHH              HQVHVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FI NRDLL QLYPSF++GLTPFFTLNWSEYSE LTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 240  FISNRDLLAQLYPSFAEGLTPFFTLNWSEYSEFLTFRGGLNPVTGGLWLTDTAHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            ++FLIAGHMY+TNWGIGH+++EILEAHKGPFTGEGH+GLYEILTTSWHAQLALNLA+LGS
Sbjct: 300  ILFLIAGHMYRTNWGIGHNLKEILEAHKGPFTGEGHRGLYEILTTSWHAQLALNLAMLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIVSHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLV VG KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPSLTAPDATASTSLTWGGGDLVAVGAKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDK NLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKVNLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QG+VTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGIVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            VQGRAVGVAHYLLGGI TTW+FFLARIIAV
Sbjct: 720  VQGRAVGVAHYLLGGIATTWAFFLARIIAV 749



 Score =  358 bits (920), Expect = 8e-96
 Identities = 192/443 (43%), Positives = 271/443 (61%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ L++ P TT  IW   A AHDF+SH +  EE + +++F++HFGQLAIIF+W SG  F
Sbjct: 32   FSKTLAKGPNTTTWIWNLHADAHDFDSHTNDLEE-ISRKVFSAHFGQLAIIFIWLSGMYF 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLGDPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQIWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGALIFAALMLFAGWFHYH-KAAPKLAWFQDVESMLNHHLAGLLGLG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWV----NFLS-------VLP-YPQGLGPLFSGQW 3479
            SL+W GH VHV++P ++    G+  + +     F+S       + P + +GL P F+  W
Sbjct: 207  SLSWAGHQVHVSLPINQLLDAGVDPKEIPLPHEFISNRDLLAQLYPSFAEGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS+       L                  +P T  LWLTD AHHHLAIA++F +AGHM
Sbjct: 267  SEYSEFLTFRGGL------------------NPVTGGLWLTDTAHHHLAIAILFLIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            YRTN+GIGH++K+ILEAH  P    G GH+ LY  +  S H QL L LA LG +T +VA 
Sbjct: 309  YRTNWGIGHNLKEILEAHKGPF--TGEGHRGLYEILTTSWHAQLALNLAMLGSLTIVVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMYS+P Y +LA D+ TQ +L+ HH +I GF++ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AI+SHL+W  +FLGFH+
Sbjct: 427  VLRHRDAIVSHLNWACIFLGFHS 449


>gb|AET47276.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            morrisonicola]
          Length = 750

 Score = 1367 bits (3538), Expect = 0.0
 Identities = 654/750 (87%), Positives = 684/750 (91%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSP+ EVKI+VERDP+KTSFEKWA PGHFS+TLAKG P+TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPKPEVKIVVERDPVKTSFEKWAKPGHFSKTLAKG-PDTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T+DLEEISRK+FSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV
Sbjct: 60   TKDLEEISRKVFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIG LIFAALMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGALIFAALMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAP+L+WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPELAWFQDVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYPSF+KGLTPFFTLNWSEYS+ LTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 240  FILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTAHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+FLIAGHMYKTNW IGH++++ILEAHKGPFTGEGHKGLYEILTTSWHAQLA+NLA+LGS
Sbjct: 300  VLFLIAGHMYKTNWRIGHNLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLAMLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTI+VAHHMYSMPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIIVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSA GRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSAPGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            VQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 720  VQGRAVGVAHYLLGGIVTTWAFFLARIIAV 749



 Score =  355 bits (911), Expect = 9e-95
 Identities = 192/443 (43%), Positives = 266/443 (60%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ L++ P TT  IW   A AHDF+SH    EE + +++F++HFGQLAIIF+W SG  F
Sbjct: 32   FSKTLAKGPDTTTWIWNLHADAHDFDSHTKDLEE-ISRKVFSAHFGQLAIIFIWLSGMYF 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLADPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQIWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGALIFAALMLFAGWFHYH-KAAPELAWFQDVESMLNHHLAGLLGLG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWVNF---------LSVLPYP---QGLGPLFSGQW 3479
            SL+W GH +HV++P ++    G+  + +           L    YP   +GL P F+  W
Sbjct: 207  SLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLAQLYPSFAKGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS        L                  +P T  LWLTD AHHHLAIA++F +AGHM
Sbjct: 267  SEYSDFLTFRGGL------------------NPVTGGLWLTDTAHHHLAIAVLFLIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            Y+TN+ IGH++KDILEAH  P    G GHK LY  +  S H QL + LA LG +T +VA 
Sbjct: 309  YKTNWRIGHNLKDILEAHKGPF--TGEGHKGLYEILTTSWHAQLAINLAMLGSLTIIVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMYS+P Y +LA D+ TQ +L+ HH +I GFI+ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AI+SHL+WV +FLGFH+
Sbjct: 427  VLRHRDAIVSHLNWVCIFLGFHS 449


>ref|YP_004891359.1| photosystem I P700 apoprotein A1 (chloroplast) [Cephalotaxus
            wilsoniana] gi|350529198|dbj|BAL03740.1| photosystem I
            P700 apoprotein A1 (chloroplast) [Cephalotaxus
            wilsoniana]
          Length = 750

 Score = 1366 bits (3536), Expect = 0.0
 Identities = 655/750 (87%), Positives = 679/750 (90%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSPE EVKI+VERDPIKTSFEKWA PGHFS+TLAKG P TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPEPEVKIVVERDPIKTSFEKWAKPGHFSKTLAKG-PNTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T DLEEISRK+FSAHFGQLAIIFIWLSGMYFHGARFSNYEAWL DPTHIKPSAQVVWPIV
Sbjct: 60   TNDLEEISRKVFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLGDPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIG LIFAALMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGALIFAALMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAPKL+WFQ VESMLNHH              HQVHVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPKLAWFQDVESMLNHHLAGLLGIGSLSWAGHQVHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FI NRDLL QLYPSF++GLTPFFTLNWSEYSE LTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 240  FISNRDLLAQLYPSFAEGLTPFFTLNWSEYSEFLTFRGGLNPVTGGLWLTDTAHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            ++F+IAGHMY+TNWGIGH+++EILEAHKGPFTGEGH+GLYEILTTSWHAQLALNLA+LGS
Sbjct: 300  ILFIIAGHMYRTNWGIGHNLKEILEAHKGPFTGEGHRGLYEILTTSWHAQLALNLAMLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFLIVGAAAHSAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIVSHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLV VG KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPSLTAPDATASTSLTWGGGDLVAVGAKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDK NLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKVNLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QG+VTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGMVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            VQGRAVGVAHYLLGGI TTW+FFLARIIAV
Sbjct: 720  VQGRAVGVAHYLLGGIATTWAFFLARIIAV 749



 Score =  359 bits (922), Expect = 5e-96
 Identities = 192/443 (43%), Positives = 271/443 (61%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ L++ P TT  IW   A AHDF+SH +  EE + +++F++HFGQLAIIF+W SG  F
Sbjct: 32   FSKTLAKGPNTTTWIWNLHADAHDFDSHTNDLEE-ISRKVFSAHFGQLAIIFIWLSGMYF 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLGDPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQIWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGALIFAALMLFAGWFHYH-KAAPKLAWFQDVESMLNHHLAGLLGIG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWV----NFLS-------VLP-YPQGLGPLFSGQW 3479
            SL+W GH VHV++P ++    G+  + +     F+S       + P + +GL P F+  W
Sbjct: 207  SLSWAGHQVHVSLPINQLLDAGVDPKEIPLPHEFISNRDLLAQLYPSFAEGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS+       L                  +P T  LWLTD AHHHLAIA++F +AGHM
Sbjct: 267  SEYSEFLTFRGGL------------------NPVTGGLWLTDTAHHHLAIAILFIIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            YRTN+GIGH++K+ILEAH  P    G GH+ LY  +  S H QL L LA LG +T +VA 
Sbjct: 309  YRTNWGIGHNLKEILEAHKGPF--TGEGHRGLYEILTTSWHAQLALNLAMLGSLTIVVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMYS+P Y +LA D+ TQ +L+ HH +I GF++ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFLIVGAAAHSAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AI+SHL+W  +FLGFH+
Sbjct: 427  VLRHRDAIVSHLNWACIFLGFHS 449


>ref|YP_008082855.1| photosystem I P700 apoprotein A1 (chloroplast) [Picea abies]
            gi|502524889|emb|CCW23140.1| photosystem I P700
            apoprotein A1 (chloroplast) [Picea abies]
          Length = 750

 Score = 1365 bits (3534), Expect = 0.0
 Identities = 652/750 (86%), Positives = 683/750 (91%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSPE EVK++VERDP+KTSFEKWA PGHFS+TLAKG P+TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPEPEVKVVVERDPVKTSFEKWAKPGHFSKTLAKG-PDTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T+DLE+ISRK+FSAHFGQLAIIFIWLSGMYFHGARFSNYEAWL DPTHIKPSAQVVWPIV
Sbjct: 60   TDDLEDISRKVFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLGDPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQ+WRASGITSELQLYCTAIG LIFAALMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQLWRASGITSELQLYCTAIGALIFAALMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAPKL+WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPKLAWFQDVESMLNHHLAGLLGLGSLGWAGHQIHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYPSF+KGLTPFFTLNWSEYS+ LTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 240  FILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTAHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+FLIAGHMYKTNW IGH++++ILEAHKGPFTGEGHKGLYEILTTSWHAQLA+NLA+LGS
Sbjct: 300  VLFLIAGHMYKTNWIIGHNLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLALLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTIVVAHHMY+MPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIVVAHHMYAMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSA GRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSAPGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGL FLGAHF+WAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLLFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            VQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 720  VQGRAVGVAHYLLGGIVTTWAFFLARIIAV 749



 Score =  355 bits (911), Expect = 9e-95
 Identities = 192/443 (43%), Positives = 266/443 (60%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ L++ P TT  IW   A AHDF+SH D  E+ + +++F++HFGQLAIIF+W SG  F
Sbjct: 32   FSKTLAKGPDTTTWIWNLHADAHDFDSHTDDLED-ISRKVFSAHFGQLAIIFIWLSGMYF 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLGDPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQLWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGALIFAALMLFAGWFHYH-KAAPKLAWFQDVESMLNHHLAGLLGLG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWVNF---------LSVLPYP---QGLGPLFSGQW 3479
            SL W GH +HV++P ++    G+  + +           L    YP   +GL P F+  W
Sbjct: 207  SLGWAGHQIHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLAQLYPSFAKGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS        L                  +P T  LWLTD AHHHLAIA++F +AGHM
Sbjct: 267  SEYSDFLTFRGGL------------------NPVTGGLWLTDTAHHHLAIAVLFLIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            Y+TN+ IGH++KDILEAH  P    G GHK LY  +  S H QL + LA LG +T +VA 
Sbjct: 309  YKTNWIIGHNLKDILEAHKGPF--TGEGHKGLYEILTTSWHAQLAINLALLGSLTIVVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMY++P Y +LA D+ TQ +L+ HH +I GFI+ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYAMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AIISHL+WV +FLGFH+
Sbjct: 427  VLRHRDAIISHLNWVCIFLGFHS 449


>ref|YP_003934159.1| photosystem I P700 apoprotein A1 [Cedrus deodara]
            gi|307683234|dbj|BAJ19542.1| photosystem I P700
            apoprotein A1 (chloroplast) [Cedrus deodara]
          Length = 750

 Score = 1365 bits (3534), Expect = 0.0
 Identities = 652/750 (86%), Positives = 681/750 (90%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSPE EVKI+VERDP+KTSFEKWA PGHFS+TLAKG P+TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPEPEVKIVVERDPVKTSFEKWAKPGHFSKTLAKG-PDTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T+DLEEISRK+FSAHFGQLAIIFIWLSGMYFHGARFSNYEAWL DPTHIKPSAQVVWPIV
Sbjct: 60   TDDLEEISRKVFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLGDPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQ+WRASGITSELQLYCTAIG LIFA LMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQLWRASGITSELQLYCTAIGALIFAGLMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAPKL+WFQ VESMLNHH              HQVHVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPKLAWFQNVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYPSF+KGLTPFFTLNWSEYS+ LTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 240  FILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTAHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+FLIAGHMY+TNW IGHS+++ILEAHKGPFTGEGHKGLYEILTTSWHAQLA+NLA+LGS
Sbjct: 300  VLFLIAGHMYRTNWSIGHSLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLALLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTI+VAHHMY+MPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIIVAHHMYAMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSA GRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSAPGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            VQGRAVGVAHYLLGGI TTW+FFLARIIAV
Sbjct: 720  VQGRAVGVAHYLLGGIATTWAFFLARIIAV 749



 Score =  362 bits (929), Expect = 8e-97
 Identities = 196/443 (44%), Positives = 267/443 (60%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ L++ P TT  IW   A AHDF+SH D  EE + +++F++HFGQLAIIF+W SG  F
Sbjct: 32   FSKTLAKGPDTTTWIWNLHADAHDFDSHTDDLEE-ISRKVFSAHFGQLAIIFIWLSGMYF 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLGDPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQLWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF+N ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGALIFAGLMLFAGWFHYH-KAAPKLAWFQNVESMLNHHLAGLLGLG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWVNF---------LSVLPYP---QGLGPLFSGQW 3479
            SL+W GH VHV++P ++    G+  + +           L    YP   +GL P F+  W
Sbjct: 207  SLSWAGHQVHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLAQLYPSFAKGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS        L                  +P T  LWLTD AHHHLAIA++F +AGHM
Sbjct: 267  SEYSDFLTFRGGL------------------NPVTGGLWLTDTAHHHLAIAVLFLIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            YRTN+ IGHS+KDILEAH  P    G GHK LY  +  S H QL + LA LG +T +VA 
Sbjct: 309  YRTNWSIGHSLKDILEAHKGPF--TGEGHKGLYEILTTSWHAQLAINLALLGSLTIIVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMY++P Y +LA D+ TQ +L+ HH +I GFI+ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYAMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AI+SHL+WV +FLGFH+
Sbjct: 427  VLRHRDAIVSHLNWVCIFLGFHS 449


>dbj|BAF64868.1| photosystem I P700 chlorophyll a apoprotein A1 [Gnetum parvifolium]
          Length = 751

 Score = 1365 bits (3534), Expect = 0.0
 Identities = 656/751 (87%), Positives = 683/751 (90%), Gaps = 1/751 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSPESEVKI+VE+D I+TSFEKWANPGHFS+TL+KGDPETTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPESEVKIVVEKDLIRTSFEKWANPGHFSKTLSKGDPETTTWIWNLHADAHDFDSH 60

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            TEDLEEISRK+FSAHFGQLAII  WLSGMYFHGARFSNYEAWLADP  IKPSAQVVWPIV
Sbjct: 61   TEDLEEISRKVFSAHFGQLAIILTWLSGMYFHGARFSNYEAWLADPVRIKPSAQVVWPIV 120

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFF IWRA+GIT+ELQLYCTAIG LI AALMLFAGWFHYH
Sbjct: 121  GQEILNGDVGGGFRGIQITSGFFPIWRAAGITNELQLYCTAIGALILAALMLFAGWFHYH 180

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAPKL WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 181  KAAPKLVWFQQVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHE 240

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYP+F+KGL PFFTL+WSEYSEILTFRGGLNPITGGLWLTD  HHHLAIA
Sbjct: 241  FILNRDLLNQLYPNFAKGLIPFFTLDWSEYSEILTFRGGLNPITGGLWLTDTAHHHLAIA 300

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+F+IAGHMY+TNWGIGHS+++ILEAHKGPFTGEGHKGLYEILTTSWHAQLA+NLA+LGS
Sbjct: 301  VLFIIAGHMYRTNWGIGHSLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLALLGS 360

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTI+VAHHMYSMPPYPYLAIDYGTQLSLFTHH+W                LVRDYDSTTS
Sbjct: 361  LTIIVAHHMYSMPPYPYLAIDYGTQLSLFTHHLWIGGFIIVGAAAHAAIFLVRDYDSTTS 420

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI
Sbjct: 421  YNNLLDRVLRHRDAIISHLNWICIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 480

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTHV                 WGG DLVTVGTKVALLPI LGTADFLVHHIHAF
Sbjct: 481  FAQWIQNTHVTAPNLTAPAATASTSLTWGGGDLVTVGTKVALLPIQLGTADFLVHHIHAF 540

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 541  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 600

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            +ISVVIFHFSWKMQSDVWG I+ QGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS
Sbjct: 601  SISVVIFHFSWKMQSDVWGTINDQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 660

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGSALSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 661  YGSALSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 720

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAVE 2769
            VQGRAVGVAHYLLGGIVTTW+FFLARIIAVE
Sbjct: 721  VQGRAVGVAHYLLGGIVTTWAFFLARIIAVE 751



 Score =  349 bits (896), Expect = 5e-93
 Identities = 198/466 (42%), Positives = 277/466 (59%), Gaps = 25/466 (5%)
 Frame = +3

Query: 2766 RIIADVTIMISRFPK------FSQGLSQ-DP-TTRRIWFGIATAHDFESHDDITEEQLYQ 2921
            +I+ +  ++ + F K      FS+ LS+ DP TT  IW   A AHDF+SH +  EE + +
Sbjct: 11   KIVVEKDLIRTSFEKWANPGHFSKTLSKGDPETTTWIWNLHADAHDFDSHTEDLEE-ISR 69

Query: 2922 QIFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAF 3101
            ++F++HFGQLAII  W SG  FH A   N+E W+ DP+ ++P A  +W P  GQ  +   
Sbjct: 70   KVFSAHFGQLAIILTWLSGMYFHGARFSNYEAWLADPVRIKPSAQVVW-PIVGQEILNGD 128

Query: 3102 TRGSAPGPVNIAYSGLYQWWYTVGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPS 3281
              G   G + I  SG +  W   G+     LY  A+  + L+ + L AG FH   K  P 
Sbjct: 129  VGGGFRG-IQIT-SGFFPIWRAAGITNELQLYCTAIGALILAALMLFAGWFHYH-KAAPK 185

Query: 3282 ISWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPESR----GIHVRWV---------- 3419
            + WF+  ES LNHHL+GL G+ SL+W GH +HV++P ++    G+  + +          
Sbjct: 186  LVWFQQVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHEFILNR 245

Query: 3420 NFLSVLPYP---QGLGPLFSGQWNLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQS 3590
            + L+ L YP   +GL P F+  W+ YS+       L                  +P T  
Sbjct: 246  DLLNQL-YPNFAKGLIPFFTLDWSEYSEILTFRGGL------------------NPITGG 286

Query: 3591 LWLTDIAHHHLAIALIFFLAGHMYRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTIN 3770
            LWLTD AHHHLAIA++F +AGHMYRTN+GIGHS+KDILEAH  P    G GHK LY  + 
Sbjct: 287  LWLTDTAHHHLAIAVLFIIAGHMYRTNWGIGHSLKDILEAHKGPF--TGEGHKGLYEILT 344

Query: 3771 NSLHFQLGLALASLGVITSLVAQHMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAF 3950
             S H QL + LA LG +T +VA HMYS+P Y +LA D+ TQ +L+ HH +I GFI+ GA 
Sbjct: 345  TSWHAQLAINLALLGSLTIIVAHHMYSMPPYPYLAIDYGTQLSLFTHHLWIGGFIIVGAA 404

Query: 3951 AHGAIFFIRDYNPEQNQDNVLERILDHKEAIISHLSWVSLFLGFHT 4088
            AH AIF +RDY+   + +N+L+R+L H++AIISHL+W+ +FLGFH+
Sbjct: 405  AHAAIFLVRDYDSTTSYNNLLDRVLRHRDAIISHLNWICIFLGFHS 450


>dbj|BAN16915.1| photosystem I P700 apoprotein A1 (chloroplast) [Gnetum ula]
          Length = 751

 Score = 1365 bits (3533), Expect = 0.0
 Identities = 655/751 (87%), Positives = 683/751 (90%), Gaps = 1/751 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSPESEVKI+VE+D I+TSFEKWANPGHFS+TL+KGDPETTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPESEVKIVVEKDLIRTSFEKWANPGHFSKTLSKGDPETTTWIWNLHADAHDFDSH 60

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            TEDLEEISRK+FSAHFGQLAII  WLSGMYFHGARFSNYEAWLADP  IKPSAQVVWPIV
Sbjct: 61   TEDLEEISRKVFSAHFGQLAIILTWLSGMYFHGARFSNYEAWLADPVRIKPSAQVVWPIV 120

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFF IWRA+GIT+ELQLYCTAIG LI AALMLFAGWFHYH
Sbjct: 121  GQEILNGDVGGGFRGIQITSGFFPIWRAAGITNELQLYCTAIGALILAALMLFAGWFHYH 180

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAPKL WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 181  KAAPKLVWFQQVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHE 240

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYP+F+KGL PFFTL+WSEYSEILTFRGGLNPITGGLWLTD  HHHLAIA
Sbjct: 241  FILNRDLLNQLYPNFAKGLIPFFTLDWSEYSEILTFRGGLNPITGGLWLTDTAHHHLAIA 300

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+F+IAGHMY+TNWGIGHS+++ILEAHKGPFTGEGHKGLYEILTTSWHAQLA+NLA+LGS
Sbjct: 301  VLFIIAGHMYRTNWGIGHSLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLALLGS 360

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTI+VAHHMYSMPPYPYLAIDYGTQLSLFTHH+W                LVRDYDSTTS
Sbjct: 361  LTIIVAHHMYSMPPYPYLAIDYGTQLSLFTHHLWIGGFIIVGAAAHAAIFLVRDYDSTTS 420

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI
Sbjct: 421  YNNLLDRVLRHRDAIISHLNWICIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 480

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTHV                 WGG DLVTVGTKVALLPI LGTADFLVHHIHAF
Sbjct: 481  FAQWIQNTHVTAPNLTAPAATASTSLTWGGGDLVTVGTKVALLPIQLGTADFLVHHIHAF 540

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 541  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 600

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            +ISVVIFHFSWKMQSDVWG I+ QGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS
Sbjct: 601  SISVVIFHFSWKMQSDVWGTINDQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 660

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGSALSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 661  YGSALSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 720

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAVE 2769
            VQGRAVGVAHYLLGG+VTTW+FFLARIIAVE
Sbjct: 721  VQGRAVGVAHYLLGGVVTTWAFFLARIIAVE 751



 Score =  349 bits (896), Expect = 5e-93
 Identities = 198/466 (42%), Positives = 277/466 (59%), Gaps = 25/466 (5%)
 Frame = +3

Query: 2766 RIIADVTIMISRFPK------FSQGLSQ-DP-TTRRIWFGIATAHDFESHDDITEEQLYQ 2921
            +I+ +  ++ + F K      FS+ LS+ DP TT  IW   A AHDF+SH +  EE + +
Sbjct: 11   KIVVEKDLIRTSFEKWANPGHFSKTLSKGDPETTTWIWNLHADAHDFDSHTEDLEE-ISR 69

Query: 2922 QIFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAF 3101
            ++F++HFGQLAII  W SG  FH A   N+E W+ DP+ ++P A  +W P  GQ  +   
Sbjct: 70   KVFSAHFGQLAIILTWLSGMYFHGARFSNYEAWLADPVRIKPSAQVVW-PIVGQEILNGD 128

Query: 3102 TRGSAPGPVNIAYSGLYQWWYTVGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPS 3281
              G   G + I  SG +  W   G+     LY  A+  + L+ + L AG FH   K  P 
Sbjct: 129  VGGGFRG-IQIT-SGFFPIWRAAGITNELQLYCTAIGALILAALMLFAGWFHYH-KAAPK 185

Query: 3282 ISWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPESR----GIHVRWV---------- 3419
            + WF+  ES LNHHL+GL G+ SL+W GH +HV++P ++    G+  + +          
Sbjct: 186  LVWFQQVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHEFILNR 245

Query: 3420 NFLSVLPYP---QGLGPLFSGQWNLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQS 3590
            + L+ L YP   +GL P F+  W+ YS+       L                  +P T  
Sbjct: 246  DLLNQL-YPNFAKGLIPFFTLDWSEYSEILTFRGGL------------------NPITGG 286

Query: 3591 LWLTDIAHHHLAIALIFFLAGHMYRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTIN 3770
            LWLTD AHHHLAIA++F +AGHMYRTN+GIGHS+KDILEAH  P    G GHK LY  + 
Sbjct: 287  LWLTDTAHHHLAIAVLFIIAGHMYRTNWGIGHSLKDILEAHKGPF--TGEGHKGLYEILT 344

Query: 3771 NSLHFQLGLALASLGVITSLVAQHMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAF 3950
             S H QL + LA LG +T +VA HMYS+P Y +LA D+ TQ +L+ HH +I GFI+ GA 
Sbjct: 345  TSWHAQLAINLALLGSLTIIVAHHMYSMPPYPYLAIDYGTQLSLFTHHLWIGGFIIVGAA 404

Query: 3951 AHGAIFFIRDYNPEQNQDNVLERILDHKEAIISHLSWVSLFLGFHT 4088
            AH AIF +RDY+   + +N+L+R+L H++AIISHL+W+ +FLGFH+
Sbjct: 405  AHAAIFLVRDYDSTTSYNNLLDRVLRHRDAIISHLNWICIFLGFHS 450


>gb|AET46274.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            pumila]
          Length = 750

 Score = 1365 bits (3533), Expect = 0.0
 Identities = 652/750 (86%), Positives = 683/750 (91%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSP+ EVKI+VERDP+KTSFEKWA PGHFS+TLAKG P+TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPKPEVKIVVERDPVKTSFEKWAKPGHFSKTLAKG-PDTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T+DLEEISRK+FSAHFGQLAIIFIWLSGMY+HGARFSNYEAWLADPTHIKPSAQVVWPIV
Sbjct: 60   TKDLEEISRKVFSAHFGQLAIIFIWLSGMYYHGARFSNYEAWLADPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIG LIFAALMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGALIFAALMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAP L+WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPGLAWFQDVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FI NRDLL QLYPSF+KGLTPFFTLNWSEYS+ LTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 240  FIFNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTAHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+FLIAGHMYKTNW IGH+++++LEAHKGPFTGEGHKGLYEILTTSWHAQLA+NLA+LGS
Sbjct: 300  VLFLIAGHMYKTNWRIGHNLKDLLEAHKGPFTGEGHKGLYEILTTSWHAQLAINLAMLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTI+VAHHMYSMPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIIVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            VQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 720  VQGRAVGVAHYLLGGIVTTWAFFLARIIAV 749



 Score =  353 bits (906), Expect = 4e-94
 Identities = 190/443 (42%), Positives = 266/443 (60%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ L++ P TT  IW   A AHDF+SH    EE + +++F++HFGQLAIIF+W SG  +
Sbjct: 32   FSKTLAKGPDTTTWIWNLHADAHDFDSHTKDLEE-ISRKVFSAHFGQLAIIFIWLSGMYY 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLADPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQIWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGALIFAALMLFAGWFHYH-KAAPGLAWFQDVESMLNHHLAGLLGLG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWVNF---------LSVLPYP---QGLGPLFSGQW 3479
            SL+W GH +HV++P ++    G+  + +           L    YP   +GL P F+  W
Sbjct: 207  SLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHEFIFNRDLLAQLYPSFAKGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS        L                  +P T  LWLTD AHHHLAIA++F +AGHM
Sbjct: 267  SEYSDFLTFRGGL------------------NPVTGGLWLTDTAHHHLAIAVLFLIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            Y+TN+ IGH++KD+LEAH  P    G GHK LY  +  S H QL + LA LG +T +VA 
Sbjct: 309  YKTNWRIGHNLKDLLEAHKGPF--TGEGHKGLYEILTTSWHAQLAINLAMLGSLTIIVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMYS+P Y +LA D+ TQ +L+ HH +I GFI+ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYSMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AI+SHL+WV +FLGFH+
Sbjct: 427  VLRHRDAIVSHLNWVCIFLGFHS 449


>gb|AET46413.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast)
            [Pseudotsuga menziesii var. menziesii]
          Length = 750

 Score = 1364 bits (3531), Expect = 0.0
 Identities = 651/750 (86%), Positives = 682/750 (90%), Gaps = 1/750 (0%)
 Frame = +1

Query: 520  MIMRSPESEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSH 699
            MI+RSPE EVK++VERDP+KTSFEKWA PGHFS+TLAKG P+TTTWIWNLHADAHDFDSH
Sbjct: 1    MIIRSPEPEVKVVVERDPVKTSFEKWAKPGHFSKTLAKG-PDTTTWIWNLHADAHDFDSH 59

Query: 700  TEDLEEISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTHIKPSAQVVWPIV 879
            T DLEEISRK+FSAHFGQLAIIFIWLSGMY+HGARFSNYEAWL DPTHIKPSAQVVWPIV
Sbjct: 60   TNDLEEISRKVFSAHFGQLAIIFIWLSGMYYHGARFSNYEAWLGDPTHIKPSAQVVWPIV 119

Query: 880  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLIFAALMLFAGWFHYH 1059
            GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIG LIFAALMLFAGWFHYH
Sbjct: 120  GQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGALIFAALMLFAGWFHYH 179

Query: 1060 KAAPKLSWFQ-VESMLNHHXXXXXXXXXXXXXXHQVHVSLPINQLLDAGVDPKEIPLPHE 1236
            KAAPKL+WFQ VESMLNHH              HQ+HVSLPINQLLDAGVDPKEIPLPHE
Sbjct: 180  KAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHE 239

Query: 1237 FILNRDLLVQLYPSFSKGLTPFFTLNWSEYSEILTFRGGLNPITGGLWLTDIVHHHLAIA 1416
            FILNRDLL QLYPSF+KGLTPFFTLNWSEYS+ LTFRGGLNP+TGGLWLTD  HHHLAIA
Sbjct: 240  FILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTAHHHLAIA 299

Query: 1417 VIFLIAGHMYKTNWGIGHSIQEILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAILGS 1596
            V+FLIAGHMY+TNW IGH++++ILEAHKGPFTGEGHKGLYEILTTSWHAQLA+NLA+LGS
Sbjct: 300  VLFLIAGHMYRTNWMIGHNLKDILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLALLGS 359

Query: 1597 LTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHMWXXXXXXXXXXXXXXXXLVRDYDSTTS 1776
            LTIVVAHHMY+MPPYPYLAIDYGTQLSLFTHHMW                +VRDYD TT 
Sbjct: 360  LTIVVAHHMYAMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQ 419

Query: 1777 YNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPI 1956
            YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSA GRPQDMFSDTAIQLQPI
Sbjct: 420  YNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSAPGRPQDMFSDTAIQLQPI 479

Query: 1957 FAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFLVHHIHAF 2136
            FAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFLVHHIHAF
Sbjct: 480  FAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFLVHHIHAF 539

Query: 2137 TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 2316
            TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN
Sbjct: 540  TIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN 599

Query: 2317 AISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQASQVIQS 2496
            AISVVIFHFSWKMQSDVWG+IS QGVVTHITGGNFAQSS+TINGWLRDFLWAQASQVIQS
Sbjct: 600  AISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQS 659

Query: 2497 YGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 2676
            YGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI
Sbjct: 660  YGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI 719

Query: 2677 VQGRAVGVAHYLLGGIVTTWSFFLARIIAV 2766
            +QGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 720  IQGRAVGVAHYLLGGIVTTWAFFLARIIAV 749



 Score =  354 bits (909), Expect = 2e-94
 Identities = 191/443 (43%), Positives = 267/443 (60%), Gaps = 17/443 (3%)
 Frame = +3

Query: 2811 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 2987
            FS+ L++ P TT  IW   A AHDF+SH +  EE + +++F++HFGQLAIIF+W SG  +
Sbjct: 32   FSKTLAKGPDTTTWIWNLHADAHDFDSHTNDLEE-ISRKVFSAHFGQLAIIFIWLSGMYY 90

Query: 2988 HVAWQGNFEFWINDPLHVRPIAHAIWDPHFGQPAIEAFTRGSAPGPVNIAYSGLYQWWYT 3167
            H A   N+E W+ DP H++P A  +W P  GQ  +     G   G + I  SG +Q W  
Sbjct: 91   HGARFSNYEAWLGDPTHIKPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQIWRA 147

Query: 3168 VGLRTNEDLYTGALFLIFLSTVFLIAGRFHLQSKRKPSISWFKNAESRLNHHLSGLFGVS 3347
             G+ +   LY  A+  +  + + L AG FH   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 148  SGITSELQLYCTAIGALIFAALMLFAGWFHYH-KAAPKLAWFQDVESMLNHHLAGLLGLG 206

Query: 3348 SLAWTGHLVHVAIPESR----GIHVRWVNF---------LSVLPYP---QGLGPLFSGQW 3479
            SL+W GH +HV++P ++    G+  + +           L    YP   +GL P F+  W
Sbjct: 207  SLSWAGHQIHVSLPINQLLDAGVDPKEIPLPHEFILNRDLLAQLYPSFAKGLTPFFTLNW 266

Query: 3480 NLYSQNPDSNSHLFGTSQXXXXXXXXXXXXFHPQTQSLWLTDIAHHHLAIALIFFLAGHM 3659
            + YS        L                  +P T  LWLTD AHHHLAIA++F +AGHM
Sbjct: 267  SEYSDFLTFRGGL------------------NPVTGGLWLTDTAHHHLAIAVLFLIAGHM 308

Query: 3660 YRTNFGIGHSIKDILEAHMPPGGKLGRGHKSLYNTINNSLHFQLGLALASLGVITSLVAQ 3839
            YRTN+ IGH++KDILEAH  P    G GHK LY  +  S H QL + LA LG +T +VA 
Sbjct: 309  YRTNWMIGHNLKDILEAHKGPF--TGEGHKGLYEILTTSWHAQLAINLALLGSLTIVVAH 366

Query: 3840 HMYSLPAYAFLAQDFTTQAALYAHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNQDNVLER 4019
            HMY++P Y +LA D+ TQ +L+ HH +I GFI+ GA AH AIF +RDY+P    +N+L+R
Sbjct: 367  HMYAMPPYPYLAIDYGTQLSLFTHHMWIGGFIIVGAAAHAAIFMVRDYDPTTQYNNLLDR 426

Query: 4020 ILDHKEAIISHLSWVSLFLGFHT 4088
            +L H++AI+SHL+WV +FLGFH+
Sbjct: 427  VLRHRDAIVSHLNWVCIFLGFHS 449