BLASTX nr result

ID: Ephedra28_contig00015357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00015357
         (672 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323587.2| hypothetical protein POPTR_0016s12520g [Popu...    73   7e-11

>ref|XP_002323587.2| hypothetical protein POPTR_0016s12520g [Populus trichocarpa]
            gi|550321354|gb|EEF05348.2| hypothetical protein
            POPTR_0016s12520g [Populus trichocarpa]
          Length = 1115

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 2/221 (0%)
 Frame = +2

Query: 14   GLVTVADLQSFEILFSKNCLPNGLASVYSIKMLTVILSKGISLPTKSPKSEQTVKSPCEK 193
            G V V D  S  +LFS   + +  + V S+  +  I +  +    KSPK   +   P   
Sbjct: 630  GRVVVLDTSSLAVLFSTESVSSSCSPVISVNWVECINTCSL---VKSPKHSDS-NMPINP 685

Query: 194  SQNIIFLTSTDGVLVTVDGNTGEILGSNSDFIKQATGTVAFHLIEGGSME--LXXXXXXX 367
            ++ ++F  + D  L  +DG TG ++ S+    K+ +  ++ ++I+G      L       
Sbjct: 686  TEQVMFFLTKDATLYMIDGGTGSMISSHPWHPKKKSVAISMYVIDGSPSVPGLTDGKQLE 745

Query: 368  XXXXXXXXXXXXXXXNSTCIHDHNDMKGFSDKMELSHGQSPDNFXXXXXXXXXXXXYPAT 547
                            ST I  HN+ +  S    L+  +  D+F            Y   
Sbjct: 746  SDQNFIAKNESEHTTTSTGISSHNN-EHHSSVNTLTREKLLDSFILLCCEDSLHL-YSTK 803

Query: 548  SVFQGHVKPICNVKLDLPCCWASTFFDNDGSVVGLAMLYKT 670
            +V QG+ K IC VK   PCCWAST F   G++ G+ +L+++
Sbjct: 804  NVIQGNNKTICKVKHAKPCCWAST-FRKQGNICGVVLLFQS 843


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