BLASTX nr result

ID: Ephedra28_contig00015165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00015165
         (529 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24761.1| unknown [Picea sitchensis]                              56   4e-06

>gb|ABK24761.1| unknown [Picea sitchensis]
          Length = 557

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/85 (37%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = -3

Query: 281 VCSHTHYEDLCAHTMSK-LGN-PSNPVGITKFALMGAMEQSSKALELSHSLLHKSYGEDF 108
           VCS T Y ++C +++S  LG+ P+ P  +   ALM A+E+++KA  L    + ++     
Sbjct: 55  VCSKTLYPEICYYSLSPHLGSSPAQPKKLLHVALMIALEEANKAFALVLRFVKQT----- 109

Query: 107 VGAMEDCVHLMDITKDQLQTSLSIL 33
             A++DC+ LMDIT+DQL +S+++L
Sbjct: 110 -SALQDCMELMDITRDQLDSSIALL 133


Top