BLASTX nr result

ID: Ephedra28_contig00015161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00015161
         (383 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001781594.1| predicted protein [Physcomitrella patens] gi...    62   8e-08
ref|XP_001780485.1| predicted protein [Physcomitrella patens] gi...    55   1e-05

>ref|XP_001781594.1| predicted protein [Physcomitrella patens]
           gi|162666908|gb|EDQ53550.1| predicted protein
           [Physcomitrella patens]
          Length = 335

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
 Frame = +2

Query: 86  WIQQIVNLTTKGFWLKGLVGLLL--GMELSYTSLILGMDSAKMLMQILSTIMKKDPRDNT 259
           W Q ++ L T GFWL+ +V L+L  GMEL   SL+LG+DSAK+L  +L+ I ++  R   
Sbjct: 97  WNQAMIVLITNGFWLRSIVSLILFAGMELFQMSLMLGIDSAKLLRSVLTYIRRERIRRGW 156

Query: 260 QAVTRKS-----AHKYQDIVTIIFALLLWGGMFSLWNLDIYSKERR 382
           Q     S       K   ++ ++ + +LW G   L   D+ S  RR
Sbjct: 157 QKQWDSSPDNLRRRKIGMLIFLVTSTILWAGSLGLTVTDVNSAVRR 202


>ref|XP_001780485.1| predicted protein [Physcomitrella patens]
           gi|162668071|gb|EDQ54686.1| predicted protein
           [Physcomitrella patens]
          Length = 341

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
 Frame = +2

Query: 86  WIQQIVNLTTKGFWLKGLVGLLLGMELSYTSLILGMDSAKMLMQILSTIMKKDPRDNTQA 265
           W Q ++ L TKGFW++ +V L++GME+S  SL++G+DSA  L   L    +   R   Q 
Sbjct: 100 WNQAMIFLVTKGFWVRSIVSLIIGMEMSQMSLLVGIDSATFLKSGLMHPKRVRIRRGWQK 159

Query: 266 VTRKS-----AHKYQDIVTIIFALLLWGGMFSLWNLDIYSKERR 382
               S       K   +V +  +++LW     L   D+ S  RR
Sbjct: 160 HWNSSPETLHRRKAGMLVFLAISIILWAACLVLTVTDVNSYVRR 203


Top