BLASTX nr result

ID: Ephedra28_contig00015065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00015065
         (490 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006848572.1| hypothetical protein AMTR_s03244p00004520 [A...    57   2e-06
ref|XP_006827702.1| hypothetical protein AMTR_s00009p00258930 [A...    57   3e-06

>ref|XP_006848572.1| hypothetical protein AMTR_s03244p00004520 [Amborella trichopoda]
           gi|548851892|gb|ERN10153.1| hypothetical protein
           AMTR_s03244p00004520 [Amborella trichopoda]
          Length = 160

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/103 (33%), Positives = 52/103 (50%)
 Frame = +3

Query: 3   SGIIPRAGQMQTFDSSRFEGNMNLTDPQNNNRKEASEDLGTCYEDDGDSMKNYNAEEMLW 182
           SG++P A  M TFD+S + GN +L  P      + S +L   + +D D           W
Sbjct: 50  SGLVPYADHMITFDASAYYGNEDLCGPPLPKTCD-SHELVARFNNDEDLRTGPPEVRQFW 108

Query: 183 GLSVGLSFGIGFAGFILTMLFNKTIKTKTLKFMDHVIQVWILK 311
            +SVGL FGIGF G+   + F +      LK MD ++++ I +
Sbjct: 109 -ISVGLGFGIGFGGWFSVLAFKRKWNHVVLKVMDFIVKILITR 150


>ref|XP_006827702.1| hypothetical protein AMTR_s00009p00258930 [Amborella trichopoda]
           gi|548832322|gb|ERM95118.1| hypothetical protein
           AMTR_s00009p00258930 [Amborella trichopoda]
          Length = 626

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/103 (32%), Positives = 51/103 (49%)
 Frame = +3

Query: 3   SGIIPRAGQMQTFDSSRFEGNMNLTDPQNNNRKEASEDLGTCYEDDGDSMKNYNAEEMLW 182
           SG++P AG M TFD+S + GN +L  P      + S +L   + +D D           W
Sbjct: 509 SGLVPYAGHMITFDASTYYGNEDLCGPPLPKTCD-SHELVPRFNNDEDLRTGPPEVRQFW 567

Query: 183 GLSVGLSFGIGFAGFILTMLFNKTIKTKTLKFMDHVIQVWILK 311
            +SVGL FG GF G+   +   +      LK MD ++++ I +
Sbjct: 568 -ISVGLGFGTGFGGWFSILAIKRKWNNAVLKVMDFIVEILITR 609


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