BLASTX nr result

ID: Ephedra28_contig00014961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00014961
         (768 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006843053.1| hypothetical protein AMTR_s00186p00022000 [A...    70   6e-10
ref|XP_006843052.1| hypothetical protein AMTR_s00186p00021680 [A...    57   9e-06

>ref|XP_006843053.1| hypothetical protein AMTR_s00186p00022000 [Amborella trichopoda]
           gi|548845252|gb|ERN04728.1| hypothetical protein
           AMTR_s00186p00022000 [Amborella trichopoda]
          Length = 123

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 28/78 (35%), Positives = 46/78 (58%)
 Frame = +2

Query: 428 VTGTSLHRNAVKKFRSHLDCFSESGKWIYNSTARHIPWNYAGDQYASQCDGKHSSVKGNA 607
           + GT +  +++ KFR HL C SESG+W+Y+   R IPWN+  +QY+ +C+ +H  ++G  
Sbjct: 44  IQGTPVLGHSIDKFRDHLRCISESGRWVYDPMPRQIPWNHVAEQYSERCEERHPGLRGEG 103

Query: 608 VGDWAEILASHPEYGNWT 661
                 I  ++    NWT
Sbjct: 104 ------IAGTYYSTANWT 115


>ref|XP_006843052.1| hypothetical protein AMTR_s00186p00021680 [Amborella trichopoda]
           gi|548845251|gb|ERN04727.1| hypothetical protein
           AMTR_s00186p00021680 [Amborella trichopoda]
          Length = 166

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +2

Query: 662 VREELKWVWRTNNSCPIIPIDRIAFCKLIGAYG 760
           VREELKWVW+++NSCP +P+DR  +CKL+GA G
Sbjct: 9   VREELKWVWQSSNSCPTLPVDRNDWCKLLGAKG 41


Top