BLASTX nr result
ID: Ephedra28_contig00014787
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00014787
(1358 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me... 130 2e-27
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub... 124 9e-26
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub... 123 2e-25
gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus pe... 120 1e-24
ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata] gi... 114 1e-22
ref|XP_006391790.1| hypothetical protein EUTSA_v10023214mg [Eutr... 111 8e-22
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su... 108 5e-21
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su... 108 5e-21
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr... 108 5e-21
gb|EEE70198.1| hypothetical protein OsJ_30285 [Oryza sativa Japo... 106 3e-20
gb|EEC85033.1| hypothetical protein OsI_32338 [Oryza sativa Indi... 106 3e-20
ref|NP_001063889.1| Os09g0555200 [Oryza sativa Japonica Group] g... 106 3e-20
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 103 1e-19
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 103 1e-19
emb|CAH66955.1| OSIGBa0147H17.3 [Oryza sativa Indica Group] 102 5e-19
ref|NP_001053609.1| Os04g0572600 [Oryza sativa Japonica Group] g... 102 5e-19
gb|EEE61535.1| hypothetical protein OsJ_15844 [Oryza sativa Japo... 91 1e-15
gb|EEC77828.1| hypothetical protein OsI_17044 [Oryza sativa Indi... 91 1e-15
gb|ADE77847.1| unknown [Picea sitchensis] 89 4e-15
gb|EXB56512.1| hypothetical protein L484_008893 [Morus notabilis] 84 2e-13
>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1687
Score = 130 bits (326), Expect = 2e-27
Identities = 82/251 (32%), Positives = 129/251 (51%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
V +PF+QAC +NP ++AAK G+ DNL G+LD+L WGN P+GT G F+I+ + E++
Sbjct: 1406 VSSPFVQACFSNPGSSFLKAAKSGIVDNLQGNLDALAWGNCLPMGTGGQFDIIYS-EKVE 1464
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDK 977
++ + V +LE + D+ + +++K + + D R +K Y
Sbjct: 1465 EINKSVDVYGLLETSFNQ--MDQEINIPQSRKYSSGKCSSDFR------SKNGGYT---- 1512
Query: 976 VSIPPKESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREIL 797
PKE K KS+ ++ ++ V+L
Sbjct: 1513 ----PKEP------------------KQWKSVLRNFMTANDIQRLTFDARVIL------- 1543
Query: 796 HSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKDG 617
++Y + ++LSETDK + VL HP +EK G+G Q IK+G +P+F D+RCF + RKDG
Sbjct: 1544 -NKYQIDETLSETDKLTIMKVLHFHPRRDEKFGSGPQNIKVGWHPEFTDSRCFFIIRKDG 1602
Query: 616 SCVDFSYLKCL 584
S DFSY KC+
Sbjct: 1603 SVEDFSYRKCI 1613
>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Cucumis sativus]
Length = 1469
Score = 124 bits (311), Expect = 9e-26
Identities = 90/276 (32%), Positives = 136/276 (49%), Gaps = 7/276 (2%)
Frame = -2
Query: 1339 LVEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEM 1160
LV+ PFMQAC ++P +++AAK G++DNL GSLD+L WG P LGT G F+IL + +
Sbjct: 1231 LVKTPFMQACFSSPGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGH 1290
Query: 1159 PSCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQN- 983
++P+ V +L Q T K N+ +++
Sbjct: 1291 -ELNKPVDVYNLLG----------------GQSTC---------------EKQNTKIESL 1318
Query: 982 DKVSIPPKESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVEN---SEGKQEVLLCT 812
DK +I K S + +++ K LK + VS + + + L
Sbjct: 1319 DKNTISEKYSAQL---------MLKNGGSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFA 1369
Query: 811 LREILHSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMV 632
LR ILH +Y + + L+E DKS + L HPH +EK+G G Q IK+G + + +TRCF++
Sbjct: 1370 LRTILH-KYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVL 1428
Query: 631 ERKDGSCVDFSYLKCL---SRLNAPGRTNAMKEKHM 533
R DG+ DFSY KC+ + AP R + K M
Sbjct: 1429 IRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWM 1464
>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1438
Score = 123 bits (309), Expect = 2e-25
Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 3/271 (1%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
V APFMQAC + P LV+AAK G+ DNL GSLD+L WGN P LG+ G F+I+ +K P
Sbjct: 1207 VIAPFMQACFSTPGPCLVKAAKVGVVDNLQGSLDALTWGNTPSLGSGGQFDIIFSKG--P 1264
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDK 977
S+PI V ++L + + + +N D S + + N Y+
Sbjct: 1265 VSSKPIKVYDLL--------SSQIITNPQNGFEMSDAPIHLSDKFVAPNMYKNGYL---- 1312
Query: 976 VSIPPKESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREIL 797
++ + +L + +Q ++ +++LK+IL
Sbjct: 1313 -----RKWESITKSVLRENLTIQDIDRLSQALKNIL------------------------ 1343
Query: 796 HSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKDG 617
+Y V + +++ DK ++ VL+ HPH + K+G G++ +K+G +PD + RCFM+ R DG
Sbjct: 1344 -QKYDVNERINDMDKQVLMMVLRFHPHGDRKIGLGIKEVKVGHHPDHENVRCFMLVRTDG 1402
Query: 616 SCVDFSYLKCLS---RLNAPGRTNAMKEKHM 533
+ D SY KC+ + AP R + ++M
Sbjct: 1403 TIEDVSYHKCICGAYDIIAPHRAKGYRVRYM 1433
>gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
Length = 1356
Score = 120 bits (301), Expect = 1e-24
Identities = 83/271 (30%), Positives = 137/271 (50%), Gaps = 3/271 (1%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
V +PF+QAC ++P ++AAK G+ D L GS+++L WGN PP GT F+IL +KE +
Sbjct: 1128 VSSPFVQACFSSPGACFIKAAKGGVVDELHGSVEALAWGNTPPSGTGRQFDILYSKEGL- 1186
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDK 977
+ S+P+ ++L Q + +++ A++ S KA N+ + D
Sbjct: 1187 NLSKPLNPYDLL-----------GSQISSSRENAFETS----------KAWNNTLDKCDV 1225
Query: 976 VSIPPKESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREIL 797
SI ++S ++ + K T++LK IL
Sbjct: 1226 TSIGLEKSESVFKSVIRKYLTINDIQKWTQTLKRILR----------------------- 1262
Query: 796 HSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKDG 617
+Y + +SL+E DKS+++ L HPH +K+G+G+Q IK+G++P + RCFM+ R D
Sbjct: 1263 --KYDINESLTEGDKSILKMALHFHPHKVDKMGSGVQDIKVGQHPKHENARCFMLVRIDR 1320
Query: 616 SCVDFSYLKCL---SRLNAPGRTNAMKEKHM 533
+ DFSY KC+ + AP R + + K M
Sbjct: 1321 TEEDFSYHKCVLGALEIVAPERAKSYRSKWM 1351
>ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata] gi|297332282|gb|EFH62700.1|
NRPD1a [Arabidopsis lyrata subsp. lyrata]
Length = 1456
Score = 114 bits (284), Expect = 1e-22
Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 4/270 (1%)
Frame = -2
Query: 1330 APFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMPSC 1151
APF QAC ++P + ++AAK+G++D+L GS+D+L WG P GT FEI+++ + +
Sbjct: 1216 APFTQACFSSPSQCFLKAAKEGVRDDLQGSIDALAWGKVPGFGTGDQFEIIISPK-VHGF 1274
Query: 1150 SEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDKVS 971
+ P+ V ++L T K NS ++DKV+
Sbjct: 1275 TTPVNVYDLLSSTPP---------------------------------KTNSAPKSDKVT 1301
Query: 970 IPPKESNRSSNHILGDGWQMQSKNKDTKSLK-SILHVSSKVENSEGKQEVLLCTLREILH 794
+ P + +LG + K D K + S L EN E + +L+ IL
Sbjct: 1302 VQPFD-------LLGTAFLKGIKVLDGKGISMSRLRTIFTWENIEKLSQ----SLKRILT 1350
Query: 793 SRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKDGS 614
S Y + L+ D+ LV VL HP+ +K+G GL+GI++ K+ D+RCF V R DG+
Sbjct: 1351 S-YEINDPLNGRDEELVMMVLHLHPNSADKIGPGLKGIRVAKS-KHGDSRCFEVVRIDGT 1408
Query: 613 CVDFSYLKCL---SRLNAPGRTNAMKEKHM 533
DFSY KC+ +++ AP + N K K++
Sbjct: 1409 FEDFSYHKCVLGATKIIAPKKVNLYKSKYL 1438
>ref|XP_006391790.1| hypothetical protein EUTSA_v10023214mg [Eutrema salsugineum]
gi|557088296|gb|ESQ29076.1| hypothetical protein
EUTSA_v10023214mg [Eutrema salsugineum]
Length = 1465
Score = 111 bits (277), Expect = 8e-22
Identities = 86/274 (31%), Positives = 135/274 (49%), Gaps = 8/274 (2%)
Frame = -2
Query: 1330 APFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMPSC 1151
APF QAC ++P + ++AAK+G++D L GS+D+L WG P GT FEI+++ +
Sbjct: 1223 APFTQACFSSPSQCFLKAAKEGVRDELQGSIDALAWGKVPCFGTGDQFEIIISPKN-HGF 1281
Query: 1150 SEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDKVS 971
S P+ V + L TA + KT R+ NS ++DKV+
Sbjct: 1282 STPVDVFDFLSSTATL------------PKTGKVRAT-------------NSMPKSDKVT 1316
Query: 970 IPP-----KESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLR 806
+ P +++ N + G G M L++IL + E L +L+
Sbjct: 1317 VQPFPLLDNAISKAINTLDGKGLAM-------SQLRNIL--------TWDGIEKLSRSLK 1361
Query: 805 EILHSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVER 626
IL++ Y + L+E D+ + L HP+ +EK+G G QGIK+ N + RCF V R
Sbjct: 1362 RILYN-YEIDAPLNEKDERHLMMALLFHPNRDEKIGPGFQGIKVA-NSKHGNARCFEVVR 1419
Query: 625 KDGSCVDFSYLKCL---SRLNAPGRTNAMKEKHM 533
DG+ DFSY KC+ + + AP + N K K++
Sbjct: 1420 TDGTTEDFSYHKCVLGATEIIAPTKVNFYKSKYL 1453
>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Citrus sinensis] gi|568847098|ref|XP_006477377.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X3 [Citrus sinensis]
gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1-like isoform X4 [Citrus
sinensis]
Length = 1443
Score = 108 bits (270), Expect = 5e-21
Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 1/252 (0%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
V +PF+QA +NP ++AAK G DNL GS+D+L WG P +GT G F+I+ + E
Sbjct: 1208 VSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGR- 1266
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEK-KAKYNSYVQND 980
+ S+P+ V +L P+ S +N+K +++ + +K AK+ +
Sbjct: 1267 TLSKPVDVYNLL---------STPVSSKQNEKLKVCKAQ---GLISDKCGAKFGDFAFKG 1314
Query: 979 KVSIPPKESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREI 800
++ + S +L W + + +LK ILH
Sbjct: 1315 LGNL---DFETISRGVLRKSWTYNDVLRLSNALKKILH---------------------- 1349
Query: 799 LHSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKD 620
+Y +GQ LSE DK+ V L HP EK+G I++ +P+ ++RCF + R+D
Sbjct: 1350 ---KYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVRED 1406
Query: 619 GSCVDFSYLKCL 584
GS DFSY KC+
Sbjct: 1407 GSIEDFSYHKCV 1418
>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Citrus sinensis]
Length = 1481
Score = 108 bits (270), Expect = 5e-21
Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 1/252 (0%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
V +PF+QA +NP ++AAK G DNL GS+D+L WG P +GT G F+I+ + E
Sbjct: 1246 VSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGR- 1304
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEK-KAKYNSYVQND 980
+ S+P+ V +L P+ S +N+K +++ + +K AK+ +
Sbjct: 1305 TLSKPVDVYNLL---------STPVSSKQNEKLKVCKAQ---GLISDKCGAKFGDFAFKG 1352
Query: 979 KVSIPPKESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREI 800
++ + S +L W + + +LK ILH
Sbjct: 1353 LGNL---DFETISRGVLRKSWTYNDVLRLSNALKKILH---------------------- 1387
Query: 799 LHSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKD 620
+Y +GQ LSE DK+ V L HP EK+G I++ +P+ ++RCF + R+D
Sbjct: 1388 ---KYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVRED 1444
Query: 619 GSCVDFSYLKCL 584
GS DFSY KC+
Sbjct: 1445 GSIEDFSYHKCV 1456
>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
gi|557542783|gb|ESR53761.1| hypothetical protein
CICLE_v10018489mg [Citrus clementina]
Length = 1443
Score = 108 bits (270), Expect = 5e-21
Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 1/252 (0%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
V +PF+QA +NP ++AAK G DNL GS+D+L WG P +GT G F+I+ + E
Sbjct: 1208 VSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGR- 1266
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEK-KAKYNSYVQND 980
+ S+P+ V +L P+ S +N+K +++ + +K AK+ +
Sbjct: 1267 TLSKPVDVYNLL---------STPVSSKQNEKLKVCKAQ---GLISDKCGAKFGDFAFKG 1314
Query: 979 KVSIPPKESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREI 800
++ + S +L W + + +LK ILH
Sbjct: 1315 LGNL---DFETISRGVLRKSWTYNDVLRLSNALKKILH---------------------- 1349
Query: 799 LHSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKD 620
+Y +GQ LSE DK+ V L HP EK+G I++ +P+ ++RCF + R+D
Sbjct: 1350 ---KYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVRED 1406
Query: 619 GSCVDFSYLKCL 584
GS DFSY KC+
Sbjct: 1407 GSIEDFSYHKCV 1418
>gb|EEE70198.1| hypothetical protein OsJ_30285 [Oryza sativa Japonica Group]
Length = 1384
Score = 106 bits (264), Expect = 3e-20
Identities = 72/251 (28%), Positives = 113/251 (45%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
+ +PF +AC + P + AAK+ DNL G+LD++ WG P GTSG F++L + +
Sbjct: 1144 ISSPFSEACFSRPAYSFINAAKRDSVDNLSGALDAIAWGKEPCAGTSGPFKVLYSGKS-- 1201
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDK 977
Q + K YD + +EK ++Y Q +
Sbjct: 1202 -------------------------QKTKQNKNIYDFLHNPEVQALEKNFM-DTYKQRTE 1235
Query: 976 VSIPPKESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREIL 797
+ + S + +G + K S I EN + L LRE
Sbjct: 1236 KPSKQRSAFSSKGNATINGGTISVNQKFLDSKVGIW------ENIIDMRTCLQNMLRE-- 1287
Query: 796 HSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKDG 617
Y + + ++E DKS + L+ HP +K+G G++ IKIG NP P++RCF+V+R D
Sbjct: 1288 ---YTLNEVVTEQDKSCLIEALKFHPRGYDKIGVGIREIKIGVNPGHPNSRCFIVQRSDD 1344
Query: 616 SCVDFSYLKCL 584
+ DFSY KC+
Sbjct: 1345 TSADFSYNKCV 1355
>gb|EEC85033.1| hypothetical protein OsI_32338 [Oryza sativa Indica Group]
Length = 1384
Score = 106 bits (264), Expect = 3e-20
Identities = 72/251 (28%), Positives = 113/251 (45%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
+ +PF +AC + P + AAK+ DNL G+LD++ WG P GTSG F++L + +
Sbjct: 1144 ISSPFSEACFSRPAYSFINAAKRDSVDNLSGALDAIAWGKEPCAGTSGPFKVLYSGKS-- 1201
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDK 977
Q + K YD + +EK ++Y Q +
Sbjct: 1202 -------------------------QKTKQNKNIYDFLHNPEVQALEKNFM-DTYKQRTE 1235
Query: 976 VSIPPKESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREIL 797
+ + S + +G + K S I EN + L LRE
Sbjct: 1236 KPSKQRSAFSSKGNATINGGTISVNQKFLDSKVGIW------ENIIDMRTCLQNMLRE-- 1287
Query: 796 HSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKDG 617
Y + + ++E DKS + L+ HP +K+G G++ IKIG NP P++RCF+V+R D
Sbjct: 1288 ---YTLNEVVTEQDKSCLIEALKFHPRGYDKIGVGIREIKIGVNPGHPNSRCFIVQRSDD 1344
Query: 616 SCVDFSYLKCL 584
+ DFSY KC+
Sbjct: 1345 TSADFSYNKCV 1355
>ref|NP_001063889.1| Os09g0555200 [Oryza sativa Japonica Group]
gi|113632122|dbj|BAF25803.1| Os09g0555200, partial [Oryza
sativa Japonica Group]
Length = 318
Score = 106 bits (264), Expect = 3e-20
Identities = 72/251 (28%), Positives = 113/251 (45%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
+ +PF +AC + P + AAK+ DNL G+LD++ WG P GTSG F++L + +
Sbjct: 78 ISSPFSEACFSRPAYSFINAAKRDSVDNLSGALDAIAWGKEPCAGTSGPFKVLYSGKS-- 135
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDK 977
Q + K YD + +EK ++Y Q +
Sbjct: 136 -------------------------QKTKQNKNIYDFLHNPEVQALEKNFM-DTYKQRTE 169
Query: 976 VSIPPKESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREIL 797
+ + S + +G + K S I EN + L LRE
Sbjct: 170 KPSKQRSAFSSKGNATINGGTISVNQKFLDSKVGIW------ENIIDMRTCLQNMLRE-- 221
Query: 796 HSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKDG 617
Y + + ++E DKS + L+ HP +K+G G++ IKIG NP P++RCF+V+R D
Sbjct: 222 ---YTLNEVVTEQDKSCLIEALKFHPRGYDKIGVGIREIKIGVNPGHPNSRCFIVQRSDD 278
Query: 616 SCVDFSYLKCL 584
+ DFSY KC+
Sbjct: 279 TSADFSYNKCV 289
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Vitis vinifera]
Length = 1560
Score = 103 bits (258), Expect = 1e-19
Identities = 70/251 (27%), Positives = 117/251 (46%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
+ +PFMQ C ++P ++A K+ + DNL GSLD+L WG P +G+ G F+IL + +
Sbjct: 1253 ISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGH- 1311
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDK 977
+ P + ++L ++ C ++ L+ + T Y + + +++ Y D
Sbjct: 1312 ELARPEDIYKLLG--SQTSCHEQNLKV-KVPITCYQTTTKCGAQLV--------YANGDS 1360
Query: 976 VSIPPKESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREIL 797
S K + S +L + K ++ LK IL
Sbjct: 1361 ASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQ----------------------- 1397
Query: 796 HSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKDG 617
+Y + LSE DK+ + L HP +EK+G G Q IK+ + + +TRCF + R DG
Sbjct: 1398 --KYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDG 1455
Query: 616 SCVDFSYLKCL 584
+ DFSY KC+
Sbjct: 1456 TEEDFSYHKCV 1466
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 103 bits (258), Expect = 1e-19
Identities = 70/251 (27%), Positives = 117/251 (46%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
+ +PFMQ C ++P ++A K+ + DNL GSLD+L WG P +G+ G F+IL + +
Sbjct: 1111 ISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGH- 1169
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDK 977
+ P + ++L ++ C ++ L+ + T Y + + +++ Y D
Sbjct: 1170 ELARPEDIYKLLG--SQTSCHEQNLKV-KVPITCYQTTTKCGAQLV--------YANGDS 1218
Query: 976 VSIPPKESNRSSNHILGDGWQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREIL 797
S K + S +L + K ++ LK IL
Sbjct: 1219 ASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQ----------------------- 1255
Query: 796 HSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKDG 617
+Y + LSE DK+ + L HP +EK+G G Q IK+ + + +TRCF + R DG
Sbjct: 1256 --KYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDG 1313
Query: 616 SCVDFSYLKCL 584
+ DFSY KC+
Sbjct: 1314 TEEDFSYHKCV 1324
>emb|CAH66955.1| OSIGBa0147H17.3 [Oryza sativa Indica Group]
Length = 1407
Score = 102 bits (253), Expect = 5e-19
Identities = 68/254 (26%), Positives = 111/254 (43%), Gaps = 3/254 (1%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
+ +PF +AC + P + AAK+ DNL G+LD++ WG P G+SG F+IL + +
Sbjct: 1167 ISSPFSEACFSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCTGSSGPFKILYSGKS-- 1224
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDK 977
+ + YD + +EK + +K
Sbjct: 1225 -------------------------HETKQNEHIYDFLHNPEVQALEKNVMDTYRKRTEK 1259
Query: 976 VSIPPKESNRSSNHILGDG---WQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLR 806
S N N + G + + N ++I+ + + ++N LR
Sbjct: 1260 TSKRRSALNSEGNATINGGAISFNQKFLNSKVGIWENIIDMRTSLQNM----------LR 1309
Query: 805 EILHSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVER 626
E Y + + ++E DKS + L+ HP +K+G G++ IKIG NP P +RCF+V R
Sbjct: 1310 E-----YTLNEVVTEQDKSCLIEALKFHPRGYDKIGVGIREIKIGVNPGHPSSRCFIVLR 1364
Query: 625 KDGSCVDFSYLKCL 584
D + DFSY KC+
Sbjct: 1365 NDDTTADFSYNKCV 1378
>ref|NP_001053609.1| Os04g0572600 [Oryza sativa Japonica Group]
gi|113565180|dbj|BAF15523.1| Os04g0572600 [Oryza sativa
Japonica Group]
Length = 449
Score = 102 bits (253), Expect = 5e-19
Identities = 68/254 (26%), Positives = 111/254 (43%), Gaps = 3/254 (1%)
Frame = -2
Query: 1336 VEAPFMQACLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMP 1157
+ +PF +AC + P + AAK+ DNL G+LD++ WG P G+SG F+IL + +
Sbjct: 209 ISSPFSEACFSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCAGSSGPFKILYSGKS-- 266
Query: 1156 SCSEPIVVDEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDK 977
+ + YD + +EK + +K
Sbjct: 267 -------------------------HETKQNEHIYDFLHNPEVQALEKNVMDTYRKRTEK 301
Query: 976 VSIPPKESNRSSNHILGDG---WQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLR 806
S N N + G + + N ++I+ + + ++N LR
Sbjct: 302 TSKRRSALNSEGNATINGGAISFNQKFLNAKVGIWENIIDMRTSLQNM----------LR 351
Query: 805 EILHSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVER 626
E Y + + ++E DKS + L+ HP +K+G G++ IKIG NP P +RCF+V R
Sbjct: 352 E-----YTLNEVVTEQDKSCLMEALKFHPRGYDKIGVGIREIKIGVNPGHPSSRCFIVLR 406
Query: 625 KDGSCVDFSYLKCL 584
D + DFSY KC+
Sbjct: 407 NDDTTADFSYNKCV 420
>gb|EEE61535.1| hypothetical protein OsJ_15844 [Oryza sativa Japonica Group]
Length = 1623
Score = 90.5 bits (223), Expect = 1e-15
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 3/242 (1%)
Frame = -2
Query: 1312 CLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMPSCSEPIVV 1133
CL+ P + AAK+ DNL G+LD++ WG P G+SG F+IL + +
Sbjct: 1179 CLSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCAGSSGPFKILYSGKS---------- 1228
Query: 1132 DEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDKVSIPPKES 953
+ + YD + +EK + +K S
Sbjct: 1229 -----------------HETKQNEHIYDFLHNPEVQALEKNVMDTYRKRTEKTSKRRSAL 1271
Query: 952 NRSSNHILGDG---WQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREILHSRYM 782
N N + G + + N ++I+ + + ++N LRE Y
Sbjct: 1272 NSEGNATINGGAISFNQKFLNAKVGIWENIIDMRTSLQNM----------LRE-----YT 1316
Query: 781 VGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKDGSCVDF 602
+ + ++E DKS + L+ HP +K+G G++ IKIG NP P +RCF+V R D + DF
Sbjct: 1317 LNEVVTEQDKSCLMEALKFHPRGYDKIGVGIREIKIGVNPGHPSSRCFIVLRNDDTTADF 1376
Query: 601 SY 596
SY
Sbjct: 1377 SY 1378
>gb|EEC77828.1| hypothetical protein OsI_17044 [Oryza sativa Indica Group]
Length = 1598
Score = 90.5 bits (223), Expect = 1e-15
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 3/242 (1%)
Frame = -2
Query: 1312 CLTNPKKILVEAAKKGMQDNLLGSLDSLIWGNAPPLGTSGGFEILLNKEEMPSCSEPIVV 1133
CL+ P + AAK+ DNL G+LD++ WG P G+SG F+IL + +
Sbjct: 1158 CLSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCTGSSGPFKILYSGKS---------- 1207
Query: 1132 DEILEITAKMGCKDKPLQSNRNQKTAYDRSKRDSRRVMEKKAKYNSYVQNDKVSIPPKES 953
+ + YD + +EK + +K S
Sbjct: 1208 -----------------HETKQNEHIYDFLHNPEVQALEKNVMDTYRKRTEKTSKRRSAL 1250
Query: 952 NRSSNHILGDG---WQMQSKNKDTKSLKSILHVSSKVENSEGKQEVLLCTLREILHSRYM 782
N N + G + + N ++I+ + + ++N LRE Y
Sbjct: 1251 NSEGNATINGGAISFNQKFLNSKVGIWENIIDMRTSLQNM----------LRE-----YT 1295
Query: 781 VGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKDGSCVDF 602
+ + ++E DKS + L+ HP +K+G G++ IKIG NP P +RCF+V R D + DF
Sbjct: 1296 LNEVVTEQDKSCLIEALKFHPRGYDKIGVGIREIKIGVNPGHPSSRCFIVLRNDDTTADF 1355
Query: 601 SY 596
SY
Sbjct: 1356 SY 1357
>gb|ADE77847.1| unknown [Picea sitchensis]
Length = 231
Score = 89.0 bits (219), Expect = 4e-15
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = -2
Query: 826 VLLCTLREILHSRYMVGQSLSETDKSLVENVLQHHPHYEEKVGNGLQGIKIGKNPDFPDT 647
+L +LR ILH+RY +G + + DKS+V + L +HP ++K G G++ I IG NP FP +
Sbjct: 126 ILFHSLRGILHNRYRMGDIVRKEDKSIVMHALLYHPRSKDKTGVGIEEIMIGSNPAFPKS 185
Query: 646 RCFMVERKDGSCVDFSYLKCLSRL 575
RCF+V RKDGS DFSY KC+ L
Sbjct: 186 RCFVVVRKDGSREDFSYHKCMRGL 209
>gb|EXB56512.1| hypothetical protein L484_008893 [Morus notabilis]
Length = 230
Score = 83.6 bits (205), Expect = 2e-13
Identities = 57/161 (35%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Frame = -2
Query: 1060 TAYDRSKRDSRRVMEKKAKYNSYVQNDKVSIPPKESNRSSNHILGDGWQMQSKNKDTKSL 881
TA + S R E+KA +S ND + KES + D Q K+K+ + L
Sbjct: 65 TAANESTRPDE---EEKAAASSSTDNDGGELSVKESPKYPRW--NDPDCRQWKDKEEEIL 119
Query: 880 KSILHVSSKVENSEGKQEVLLCTLREILHSR-YMVGQSLS-ETDKSLVENVLQHHPHYEE 707
+ I E +L ++ILHSR YM G+ L+ E +K++VE +L +HP E+
Sbjct: 120 RDI--------------EPILLLTKDILHSRMYMDGERLTAEDEKAVVEKLLAYHPRSED 165
Query: 706 KVGNGLQGIKIGKNPDFPDTRCFMVERKDGSCVDFSYLKCL 584
K+G GL I + ++P F ++RC + R DG+ +DFSY KCL
Sbjct: 166 KIGCGLDSIMVDRHPQFRNSRCLFIIRTDGAWIDFSYQKCL 206