BLASTX nr result
ID: Ephedra28_contig00014632
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00014632
(576 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containi... 110 3e-22
ref|XP_006350965.1| PREDICTED: pentatricopeptide repeat-containi... 110 3e-22
ref|XP_004246925.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat... 107 2e-21
ref|XP_002885623.1| pentatricopeptide repeat-containing protein ... 107 2e-21
emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera] 107 2e-21
gb|EXB68021.1| hypothetical protein L484_009628 [Morus notabilis] 106 4e-21
sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-c... 106 4e-21
ref|NP_189042.4| pentatricopeptide repeat-containing protein [Ar... 106 4e-21
ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 105 8e-21
ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containi... 105 8e-21
ref|XP_004293058.1| PREDICTED: pentatricopeptide repeat-containi... 105 1e-20
ref|XP_003619016.1| Pentatricopeptide repeat-containing protein ... 105 1e-20
ref|XP_004233816.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_006347148.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Sela... 103 4e-20
ref|XP_006296670.1| hypothetical protein CARUB_v10016279mg [Caps... 102 5e-20
gb|ESW23833.1| hypothetical protein PHAVU_004G079600g [Phaseolus... 102 7e-20
ref|XP_006574752.1| PREDICTED: pentatricopeptide repeat-containi... 102 9e-20
ref|XP_002319164.2| pentatricopeptide repeat-containing family p... 102 9e-20
>ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Solanum lycopersicum]
Length = 653
Score = 110 bits (275), Expect = 3e-22
Identities = 53/122 (43%), Positives = 76/122 (62%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
Y +L+ T+ K L++GR +H H + S +++ V +NT+INMYAKC M +ARKVFD+M
Sbjct: 83 YNQLLKKCTEWKRLKEGRVVHEHFLRSRFSHYTVPNNTLINMYAKCESMGDARKVFDEMP 142
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
R+ +SWT L++GYS N A + L +F M NQF F S +KA L TG+Q
Sbjct: 143 ERDMVSWTALITGYSQNEGAKEGLVLFTEMLRFGFMPNQFTFGSVIKAAGALESDSTGRQ 202
Query: 571 VH 576
+H
Sbjct: 203 LH 204
Score = 80.5 bits (197), Expect = 3e-13
Identities = 39/126 (30%), Positives = 65/126 (51%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
N + SV++ +S GRQ+H + GY + + + +++MYA+C MD + VF
Sbjct: 180 NQFTFGSVIKAAGALESDSTGRQLHGACVKCGYEDNVYVGSALVDMYARCGLMDEGKIVF 239
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
DK+ + +SW L++G++ G AL +F M F F+S A AN+ ++
Sbjct: 240 DKLSCKNEVSWNGLIAGHARKGEGEIALKLFCEMKRGGFQPTHFTFSSVYAACANIGALE 299
Query: 559 TGKQVH 576
GK VH
Sbjct: 300 PGKWVH 305
Score = 79.0 bits (193), Expect = 8e-13
Identities = 38/121 (31%), Positives = 68/121 (56%)
Frame = +1
Query: 202 HDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFD 381
H ++SV +L+ G+ +H H+I SG I + NT+++MYAK +D+ARKVFD
Sbjct: 282 HFTFSSVYAACANIGALEPGKWVHVHMIKSGLELIAFIGNTLLDMYAKSGSIDDARKVFD 341
Query: 382 KMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQT 561
++ ++ +SW ++L+ Y+ +G + ++ FE M N+ F AL A ++ +
Sbjct: 342 RLVKKDVVSWNSMLTAYAQHGLGIETVECFEEMCRIGPEPNEVTFLCALTACSHAGLLDN 401
Query: 562 G 564
G
Sbjct: 402 G 402
>ref|XP_006350965.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Solanum tuberosum]
Length = 654
Score = 110 bits (274), Expect = 3e-22
Identities = 54/122 (44%), Positives = 76/122 (62%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
Y +L+ T+ K L++GR +H H + S +++ V +NT+INMYAKC M +ARKVFD+M
Sbjct: 84 YNQLLKKCTEWKRLKEGRVVHEHFLRSRFSHYTVPNNTLINMYAKCESMGDARKVFDEMP 143
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
R+ +SWT L++GYS N A + L +F M NQF F S LKA L TG+Q
Sbjct: 144 ERDMVSWTALITGYSQNEGAKEGLVLFTEMLRFGFMPNQFTFGSVLKAAGALESGGTGRQ 203
Query: 571 VH 576
+H
Sbjct: 204 LH 205
Score = 80.1 bits (196), Expect = 4e-13
Identities = 40/126 (31%), Positives = 64/126 (50%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
N + SVL+ +S GRQ+H + GY + + +++MYA+C MD + VF
Sbjct: 181 NQFTFGSVLKAAGALESGGTGRQLHGGCVKCGYEENVYVGSALVDMYARCGLMDEGKIVF 240
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
DK+ + +SW L++G++ G AL +F M F F+S A AN+ ++
Sbjct: 241 DKLSCKNEVSWNGLIAGHARKGEGEIALKLFCEMKRGGFQPTHFTFSSVYAACANIGALE 300
Query: 559 TGKQVH 576
GK VH
Sbjct: 301 PGKWVH 306
Score = 79.7 bits (195), Expect = 5e-13
Identities = 38/121 (31%), Positives = 68/121 (56%)
Frame = +1
Query: 202 HDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFD 381
H ++SV +L+ G+ +H H+I SG I + NT+++MYAK +D+ARKVFD
Sbjct: 283 HFTFSSVYAACANIGALEPGKWVHVHMIKSGLELIAFIGNTLLDMYAKSGSIDDARKVFD 342
Query: 382 KMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQT 561
++ ++ +SW ++L+ Y+ +G + ++ FE M N+ F AL A ++ +
Sbjct: 343 RLLKKDVVSWNSMLTAYAQHGLGKETVECFEEMCRIGPEPNEVTFLCALTACSHAGLLDN 402
Query: 562 G 564
G
Sbjct: 403 G 403
>ref|XP_004246925.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Solanum lycopersicum]
Length = 751
Score = 107 bits (268), Expect = 2e-21
Identities = 44/122 (36%), Positives = 78/122 (63%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
YA ++ + +SL R++H H++ S Y + N ++NMY KC + ARKVFD+M
Sbjct: 62 YAQLVSACSSLRSLPYARRVHTHILASNYQPDMIFQNHLLNMYGKCGSLKEARKVFDEML 121
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
R +SWT++++GYS NG ++ALD++ +M + +QF + S +K +N+++++ GKQ
Sbjct: 122 ERNLVSWTSIIAGYSQNGQENEALDLYFQMRQFGLIPDQFTYGSVIKTCSNMKQVELGKQ 181
Query: 571 VH 576
+H
Sbjct: 182 LH 183
Score = 87.0 bits (214), Expect = 3e-15
Identities = 40/123 (32%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
Y SV++T + K ++ G+Q+H H+I S + + + N +I MY K ++D A VF +++
Sbjct: 163 YGSVIKTCSNMKQVELGKQLHGHVIKSEHGSHLIAQNALIAMYTKFNQIDEALSVFSRIN 222
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRM-TINQFAFASALKAVANLRKIQTGK 567
+++ ISW+++++G+S G S+AL F M + + +N+F F S +L + + G+
Sbjct: 223 SKDLISWSSMIAGFSQLGYESEALSCFREMLSQGIYKLNEFIFGSIFNVCRSLAQAEYGR 282
Query: 568 QVH 576
QVH
Sbjct: 283 QVH 285
Score = 79.0 bits (193), Expect = 8e-13
Identities = 38/125 (30%), Positives = 73/125 (58%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
+H ++L K SL+ G Q+ + + +G + + N +I+MY KC M +A+K+F
Sbjct: 464 DHITLVNMLGASGKVASLEIGDQVCCYAMKNGLSEDIYVINALIDMYVKCGHMTSAKKLF 523
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
D M+ +++SW++L+ GY+ G +ALD+F++M + NQ F L A +++ +++
Sbjct: 524 DSMNNPDAVSWSSLIVGYAQFGYGEEALDLFQKMRYLAVKPNQVTFVGVLTACSHVGRVK 583
Query: 559 TGKQV 573
G Q+
Sbjct: 584 EGWQL 588
Score = 62.8 bits (151), Expect = 6e-08
Identities = 33/122 (27%), Positives = 59/122 (48%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
+ S+ + GRQ+H I G + V +MYA+C + +AR F ++
Sbjct: 265 FGSIFNVCRSLAQAEYGRQVHGLSIKFGLSFDAFAGCAVTDMYARCGWLHSARTAFYQIG 324
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
+ SW L++G+++ G+ +A+ +F +M R+T + S L A + + GKQ
Sbjct: 325 NPDLASWNALIAGFAYGGDRDEAVSLFSQMRTLRLTPDDVTIRSLLCAFVSPCALFLGKQ 384
Query: 571 VH 576
VH
Sbjct: 385 VH 386
Score = 58.5 bits (140), Expect = 1e-06
Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 TPNDQTGSQNHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCR 351
TP+D T S+L +L G+Q+H ++I SG+ +SNT+++MYA C
Sbjct: 360 TPDDVT-------IRSLLCAFVSPCALFLGKQVHCYVIKSGFDLEISISNTLLSMYANCS 412
Query: 352 RMDNARKVFDKMHTR-ESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASAL 528
+ +A K+F+++ + + +SW +L+ + ++ + +F+ M S + + L
Sbjct: 413 DLPDAHKIFNEIKNKADLVSWNAILTAFLQQRDSGEVFSLFKMMLLSSNKPDHITLVNML 472
Query: 529 KAVANLRKIQTGKQV 573
A + ++ G QV
Sbjct: 473 GASGKVASLEIGDQV 487
>ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 107 bits (268), Expect = 2e-21
Identities = 53/121 (43%), Positives = 78/121 (64%)
Frame = +1
Query: 214 ASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHT 393
A V++T K K L++G+Q+HA LI +GY L+N ++NMY+KC +D+A K+FD M
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68
Query: 394 RESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
R +SWT ++SG S N S+A+ F M QFAF+SA++A A+L I+ GKQ+
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 574 H 576
H
Sbjct: 129 H 129
Score = 77.8 bits (190), Expect = 2e-12
Identities = 37/122 (30%), Positives = 68/122 (55%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
++S + S++ G+Q+H + G + + + + +MY+KC M +A KVF++M
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
++ +SWT ++ GYS G +AL F++M + +TI+Q S L A L+ + G+
Sbjct: 169 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRS 228
Query: 571 VH 576
VH
Sbjct: 229 VH 230
Score = 68.9 bits (167), Expect = 9e-10
Identities = 32/122 (26%), Positives = 67/122 (54%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
N ++S+++ + +L+QG Q+HA ++ + +S+ +++MY KC ++ A + F
Sbjct: 308 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAF 367
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
D++ I+W +L+S + +G DA+ +FERM + + N F S L ++ ++
Sbjct: 368 DEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVE 427
Query: 559 TG 564
G
Sbjct: 428 EG 429
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Frame = +1
Query: 244 KSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFD-KMHTRESISWTTL 420
K+ + GR +H+ ++ G+ + + N + +MY+K M++A VF R +S+T L
Sbjct: 221 KACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCL 280
Query: 421 LSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQVH 576
+ GY L VF + + N+F F+S +KA AN ++ G Q+H
Sbjct: 281 IDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLH 332
>ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331463|gb|EFH61882.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 624
Score = 107 bits (268), Expect = 2e-21
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 3/136 (2%)
Frame = +1
Query: 178 NDQTGSQ---NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKC 348
ND GS + +Y ++L+ T K L QGR +H HLI S + + V++NT++NMYAKC
Sbjct: 40 NDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKC 99
Query: 349 RRMDNARKVFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASAL 528
++ ARKVFDKM R+ ++WTTL+SGYS + DAL +F +M + N+F +S +
Sbjct: 100 GSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVI 159
Query: 529 KAVANLRKIQTGKQVH 576
KA A R+ G Q+H
Sbjct: 160 KAAAAERRGCCGHQLH 175
Score = 82.8 bits (203), Expect = 6e-14
Identities = 40/122 (32%), Positives = 72/122 (59%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
+H YAS+ + L+QG+ +HA++I SG + NT+++MYAK + +ARK+F
Sbjct: 252 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF 311
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
D++ R+ +SW +LL+ Y+ +G ++A+ FE M + N+ +F S L A ++ +
Sbjct: 312 DRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLD 371
Query: 559 TG 564
G
Sbjct: 372 EG 373
Score = 64.7 bits (156), Expect = 2e-08
Identities = 32/128 (25%), Positives = 67/128 (52%)
Frame = +1
Query: 193 SQNHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARK 372
S N +SV++ ++ G Q+H + G+ + + + ++++Y + MD+A+
Sbjct: 149 SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL 208
Query: 373 VFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRK 552
VFD + +R +SW L++G++ AL++F+ M + F++AS A ++
Sbjct: 209 VFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGF 268
Query: 553 IQTGKQVH 576
++ GK VH
Sbjct: 269 LEQGKWVH 276
>emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 107 bits (268), Expect = 2e-21
Identities = 53/121 (43%), Positives = 78/121 (64%)
Frame = +1
Query: 214 ASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHT 393
A V++T K K L++G+Q+HA LI +GY L+N ++NMY+KC +D+A K+FD M
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68
Query: 394 RESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
R +SWT ++SG S N S+A+ F M QFAF+SA++A A+L I+ GKQ+
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 574 H 576
H
Sbjct: 129 H 129
Score = 77.8 bits (190), Expect = 2e-12
Identities = 37/122 (30%), Positives = 68/122 (55%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
++S + S++ G+Q+H + G + + + + +MY+KC M +A KVF++M
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
++ +SWT ++ GYS G +AL F++M + +TI+Q S L A L+ + G+
Sbjct: 169 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRS 228
Query: 571 VH 576
VH
Sbjct: 229 VH 230
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/122 (26%), Positives = 67/122 (54%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
N ++S+++ + +L+QG Q+HA ++ + +S+ +++MY KC +++A + F
Sbjct: 308 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAF 367
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
D++ I+W +L+S + +G DA+ FERM + + N F S L ++ ++
Sbjct: 368 DEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVE 427
Query: 559 TG 564
G
Sbjct: 428 EG 429
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Frame = +1
Query: 244 KSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFD-KMHTRESISWTTL 420
K+ + GR +H+ ++ G+ + + N + +MY+K M++A VF R +S+T L
Sbjct: 221 KACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCL 280
Query: 421 LSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQVH 576
+ GY L VF + + N+F F+S +KA AN ++ G Q+H
Sbjct: 281 IDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLH 332
>gb|EXB68021.1| hypothetical protein L484_009628 [Morus notabilis]
Length = 1033
Score = 106 bits (265), Expect = 4e-21
Identities = 51/122 (41%), Positives = 78/122 (63%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
+AS + K+L QGRQIHA SGY+N +SN ++++YA+C R+ +A FD
Sbjct: 569 FASAITACAGIKALNQGRQIHAQSCVSGYSNDLSISNALVSLYARCGRIQDAYLAFDNND 628
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
++ISW TL+SG++ +G +AL V+ RM++ + N F F SA+ AVANL I+ G+Q
Sbjct: 629 AIDNISWNTLISGFAQSGFYEEALQVYSRMNSLGVKANLFTFGSAVSAVANLANIKQGEQ 688
Query: 571 VH 576
+H
Sbjct: 689 IH 690
Score = 82.8 bits (203), Expect = 6e-14
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Frame = +1
Query: 91 SWKNTSLGTVATNISTH---HEDSVSLQQTTPNDQTGSQNHDWYASVLETVTK-KKSLQQ 258
SW G VA+ + H + ++ PN+ T +A VL+ +
Sbjct: 128 SWNRIIHGFVASTLVAHVLGFYQKMVMENAHPNETT-------FAGVLKACASCNVDTRH 180
Query: 259 GRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHTRESISWTTLLSGYSH 438
Q+HA ++ G++ V+ N +I++Y+K +D+A KVF + ++S+SW ++SG S
Sbjct: 181 VEQVHARIVRQGFSASPVVCNPLIDLYSKRGSVDSATKVFLSLRLKDSVSWVAMISGLSQ 240
Query: 439 NGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQVH 576
NG +A+ +F MH+S + F+S L A + G+Q+H
Sbjct: 241 NGREEEAVSLFCEMHSSGTPATPYVFSSTLSACTKVEFFGMGQQIH 286
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/118 (32%), Positives = 67/118 (56%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
+ S + V +++QG QIHA +I +GY + SN +I +YAKC R+D+A K F +M
Sbjct: 670 FGSAVSAVANLANIKQGEQIHAMIIKTGYNSETEASNVLITLYAKCGRIDDATKEFYEMP 729
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTG 564
+ +SW +++ YS +G +A+D+FE+M + + F L A +++ + G
Sbjct: 730 EKNEVSWNAMITAYSQHGLGMEAVDLFEQMKWHGLMPSHITFVGVLSACSHVGLVNEG 787
Score = 74.7 bits (182), Expect = 2e-11
Identities = 37/122 (30%), Positives = 67/122 (54%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
Y S+L T T L G QIH I +G+ + + +I+MYAK ++D A + ++
Sbjct: 468 YPSILRTCTAVGELDLGEQIHTQAIKTGFQFNIYVCSVLIDMYAKHGKLDVALGILRRLT 527
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
+ +SWT +++GY+ + +AL +FE + + + FASA+ A A ++ + G+Q
Sbjct: 528 EDDVVSWTAMVAGYTQHDMYVEALKLFEELEYRGIRPDNIGFASAITACAGIKALNQGRQ 587
Query: 571 VH 576
+H
Sbjct: 588 IH 589
Score = 73.2 bits (178), Expect = 5e-11
Identities = 36/122 (29%), Positives = 67/122 (54%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
++S L TK + G+QIH + G+A+ + N ++ +Y++ + A K+F M
Sbjct: 266 FSSTLSACTKVEFFGMGQQIHGLVFKGGFASETYVCNALLTLYSRLGNLVAAEKIFSSMQ 325
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
R+ +S+ +L+SG + G + AL++FE+M + + AS L A A + ++ GKQ
Sbjct: 326 NRDGVSYNSLISGLAQRGYSVKALELFEKMQLDLLKPDCVTVASLLSACAFVGALEKGKQ 385
Query: 571 VH 576
+H
Sbjct: 386 LH 387
Score = 63.2 bits (152), Expect = 5e-08
Identities = 30/121 (24%), Positives = 61/121 (50%)
Frame = +1
Query: 214 ASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHT 393
AS+L +L++G+Q+H++ I SG ++ +L +++++Y KC + A K F
Sbjct: 368 ASLLSACAFVGALEKGKQLHSYAIKSGMSSDIILEGSLLDLYVKCSDLRTAHKFFLTTKR 427
Query: 394 RESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
+ W +L Y N + +F +M + N F++ S L+ + ++ G+Q+
Sbjct: 428 ENVVLWNVMLVAYGQLENLGKSFRIFRQMLIEGVIPNDFSYPSILRTCTAVGELDLGEQI 487
Query: 574 H 576
H
Sbjct: 488 H 488
>sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product
[Arabidopsis thaliana]
Length = 633
Score = 106 bits (265), Expect = 4e-21
Identities = 58/142 (40%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Frame = +1
Query: 160 LQQTTPNDQTGSQ---NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVI 330
L +T+ ND GS + +Y ++L+ T K L QGR +HAH++ S + + V+ NT++
Sbjct: 43 LLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLL 102
Query: 331 NMYAKCRRMDNARKVFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQF 510
NMYAKC ++ ARKVF+KM R+ ++WTTL+SGYS + DAL F +M + N+F
Sbjct: 103 NMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEF 162
Query: 511 AFASALKAVANLRKIQTGKQVH 576
+S +KA A R+ G Q+H
Sbjct: 163 TLSSVIKAAAAERRGCCGHQLH 184
Score = 81.3 bits (199), Expect = 2e-13
Identities = 40/122 (32%), Positives = 71/122 (58%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
+H YAS+ + L+QG+ +HA++I SG + NT+++MYAK + +ARK+F
Sbjct: 261 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF 320
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
D++ R+ +SW +LL+ Y+ +G +A+ FE M + N+ +F S L A ++ +
Sbjct: 321 DRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLD 380
Query: 559 TG 564
G
Sbjct: 381 EG 382
Score = 65.9 bits (159), Expect = 7e-09
Identities = 32/128 (25%), Positives = 67/128 (52%)
Frame = +1
Query: 193 SQNHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARK 372
S N +SV++ ++ G Q+H + G+ + + + ++++Y + MD+A+
Sbjct: 158 SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 373 VFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRK 552
VFD + +R +SW L++G++ AL++F+ M + F++AS A ++
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 553 IQTGKQVH 576
++ GK VH
Sbjct: 278 LEQGKWVH 285
>ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 106 bits (265), Expect = 4e-21
Identities = 58/142 (40%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Frame = +1
Query: 160 LQQTTPNDQTGSQ---NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVI 330
L +T+ ND GS + +Y ++L+ T K L QGR +HAH++ S + + V+ NT++
Sbjct: 43 LLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLL 102
Query: 331 NMYAKCRRMDNARKVFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQF 510
NMYAKC ++ ARKVF+KM R+ ++WTTL+SGYS + DAL F +M + N+F
Sbjct: 103 NMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEF 162
Query: 511 AFASALKAVANLRKIQTGKQVH 576
+S +KA A R+ G Q+H
Sbjct: 163 TLSSVIKAAAAERRGCCGHQLH 184
Score = 81.3 bits (199), Expect = 2e-13
Identities = 40/122 (32%), Positives = 71/122 (58%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
+H YAS+ + L+QG+ +HA++I SG + NT+++MYAK + +ARK+F
Sbjct: 261 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF 320
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
D++ R+ +SW +LL+ Y+ +G +A+ FE M + N+ +F S L A ++ +
Sbjct: 321 DRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLD 380
Query: 559 TG 564
G
Sbjct: 381 EG 382
Score = 65.9 bits (159), Expect = 7e-09
Identities = 32/128 (25%), Positives = 67/128 (52%)
Frame = +1
Query: 193 SQNHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARK 372
S N +SV++ ++ G Q+H + G+ + + + ++++Y + MD+A+
Sbjct: 158 SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 373 VFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRK 552
VFD + +R +SW L++G++ AL++F+ M + F++AS A ++
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 553 IQTGKQVH 576
++ GK VH
Sbjct: 278 LEQGKWVH 285
>ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 105 bits (262), Expect = 8e-21
Identities = 61/180 (33%), Positives = 95/180 (52%)
Frame = +1
Query: 37 DKYNGPSTTPAMSVALRRSWKNTSLGTVATNISTHHEDSVSLQQTTPNDQTGSQNHDWYA 216
D P T L R+ +S GT + + + D ++ P Y+
Sbjct: 57 DPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPE-------RTLYS 109
Query: 217 SVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHTR 396
+L T + L+QGR IHAH+ +S + + VL N ++NMYAKC ++ A+ +FDKM T+
Sbjct: 110 KMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTK 169
Query: 397 ESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQVH 576
+ +SWT L+SGYS +G AS+AL +F +M + N+F +S LKA G+Q+H
Sbjct: 170 DMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLH 229
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/122 (36%), Positives = 78/122 (63%)
Frame = +1
Query: 202 HDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFD 381
H Y+SVL + SL+QG+ +HAH+I SG I + NT+I+MYAK + +A+KVF
Sbjct: 307 HFTYSSVLACASSG-SLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFR 365
Query: 382 KMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQT 561
++ ++ +SW +++SGY+ +G ++AL +FE+M +++ N+ F S L A ++ +
Sbjct: 366 RLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDE 425
Query: 562 GK 567
G+
Sbjct: 426 GQ 427
Score = 60.1 bits (144), Expect = 4e-07
Identities = 32/121 (26%), Positives = 62/121 (51%)
Frame = +1
Query: 214 ASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHT 393
+S+L+ S GRQ+HA + GY + +++++MYA+ M A+ +F+ +
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA 269
Query: 394 RESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
+ +SW L++G++ G + +F +M F ++S L A A+ ++ GK V
Sbjct: 270 KNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWV 328
Query: 574 H 576
H
Sbjct: 329 H 329
>ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 105 bits (262), Expect = 8e-21
Identities = 61/180 (33%), Positives = 95/180 (52%)
Frame = +1
Query: 37 DKYNGPSTTPAMSVALRRSWKNTSLGTVATNISTHHEDSVSLQQTTPNDQTGSQNHDWYA 216
D P T L R+ +S GT + + + D ++ P Y+
Sbjct: 57 DPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPE-------RTLYS 109
Query: 217 SVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHTR 396
+L T + L+QGR IHAH+ +S + + VL N ++NMYAKC ++ A+ +FDKM T+
Sbjct: 110 KMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTK 169
Query: 397 ESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQVH 576
+ +SWT L+SGYS +G AS+AL +F +M + N+F +S LKA G+Q+H
Sbjct: 170 DMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLH 229
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/122 (35%), Positives = 76/122 (62%)
Frame = +1
Query: 202 HDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFD 381
H Y+SV SL+QG+ +HAH+I SG I + NT+I+MYAK + +A+KVF
Sbjct: 307 HFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFR 366
Query: 382 KMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQT 561
++ ++ +SW +++SGY+ +G ++AL +FE+M +++ N+ F S L A ++ +
Sbjct: 367 RLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDE 426
Query: 562 GK 567
G+
Sbjct: 427 GQ 428
Score = 62.0 bits (149), Expect = 1e-07
Identities = 31/121 (25%), Positives = 61/121 (50%)
Frame = +1
Query: 214 ASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHT 393
+S+L+ S GRQ+HA + GY + +++++MYA+ M A+ +F+ +
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA 269
Query: 394 RESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
+ +SW L++G++ G + +F +M F ++S A A+ ++ GK V
Sbjct: 270 KNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWV 329
Query: 574 H 576
H
Sbjct: 330 H 330
>ref|XP_004293058.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Fragaria vesca subsp. vesca]
Length = 1277
Score = 105 bits (261), Expect = 1e-20
Identities = 48/121 (39%), Positives = 77/121 (63%)
Frame = +1
Query: 214 ASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHT 393
+S + + ++L QGRQIHA SGY+N + N ++ +YA+C R+ A + F+K+ T
Sbjct: 808 SSAISSCAGIQALNQGRQIHAQSCISGYSNDLSVGNALVTLYARCGRIWEAYQAFEKIDT 867
Query: 394 RESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
+++ISW L+SG+ +G +AL VF +MH + + N F F SA+ A ANL I+ G+Q+
Sbjct: 868 KDNISWNGLISGFGQSGYCEEALQVFSQMHRAGVEANLFTFGSAVSAAANLANIKQGEQI 927
Query: 574 H 576
H
Sbjct: 928 H 928
Score = 82.0 bits (201), Expect = 1e-13
Identities = 39/109 (35%), Positives = 69/109 (63%)
Frame = +1
Query: 247 SLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHTRESISWTTLLS 426
S+Q QIHA +I G+A ++ N +I++YAK +D+A+KVFD++ R+S+SW ++S
Sbjct: 415 SIQYVEQIHARIIRHGFATRLLVCNPLIDLYAKNGSVDSAKKVFDRLCFRDSVSWVAIIS 474
Query: 427 GYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
G S NG +A+ +F +M+ S + + F+S + A A + + G+Q+
Sbjct: 475 GLSRNGLEEEAVLLFIQMYTSGIFPTPYVFSSVISACAKIELFELGEQL 523
Score = 77.0 bits (188), Expect = 3e-12
Identities = 36/126 (28%), Positives = 71/126 (56%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
N Y S+L T T +L G Q+H I +G+ + + +I+MYAK ++D A +
Sbjct: 702 NQYTYPSILRTCTSVGALNLGEQVHTQAIKTGFQFNAYVCSVLIDMYAKHGKLDTALGIL 761
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
++ +++SWT +++GY+ + ++AL +FE M N + + +SA+ + A ++ +
Sbjct: 762 RRLTEDDAVSWTAMIAGYAQHDLFAEALLLFEEMLNRGIRSDTIVLSSAISSCAGIQALN 821
Query: 559 TGKQVH 576
G+Q+H
Sbjct: 822 QGRQIH 827
Score = 77.0 bits (188), Expect = 3e-12
Identities = 36/118 (30%), Positives = 67/118 (56%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
+ S + +++QG QIHA +I +G + +SN +I +Y+KC +D+A++ F +M
Sbjct: 908 FGSAVSAAANLANIKQGEQIHALVIKTGNNSEAEVSNALITLYSKCGSVDDAKREFIEMP 967
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTG 564
+ ISW +++GYS +G+ +AL +FE+M + + F L A +++ I G
Sbjct: 968 VKNEISWNAMITGYSQHGHGIEALHLFEQMKQLGVVPSHVTFVGVLSACSHVGLISEG 1025
Score = 67.8 bits (164), Expect = 2e-09
Identities = 31/121 (25%), Positives = 62/121 (51%)
Frame = +1
Query: 214 ASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHT 393
AS+L L +G+Q+H++ I +G ++ +L ++++Y KC + A + F T
Sbjct: 606 ASLLSACASLGYLYKGKQLHSYAIKAGMSSDIILEGALLDLYVKCSDLQTAYEFFLTTET 665
Query: 394 RESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
+ W +L Y + ++ +F++MH M NQ+ + S L+ ++ + G+QV
Sbjct: 666 ENVVLWNVMLVAYGLLDDLQESFHIFKQMHVEGMIPNQYTYPSILRTCTSVGALNLGEQV 725
Query: 574 H 576
H
Sbjct: 726 H 726
>ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 999
Score = 105 bits (261), Expect = 1e-20
Identities = 45/132 (34%), Positives = 85/132 (64%)
Frame = +1
Query: 181 DQTGSQNHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMD 360
DQ ++ +AS + ++L QGRQIHA SGY++ + N ++++YA+C ++
Sbjct: 532 DQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVR 591
Query: 361 NARKVFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVA 540
A FD+++ ++++SW +L+SG++ +G +AL++F +M+ + + IN F F SA+ A A
Sbjct: 592 EAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAA 651
Query: 541 NLRKIQTGKQVH 576
N+ ++ GKQ+H
Sbjct: 652 NIANVRIGKQIH 663
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/126 (30%), Positives = 77/126 (61%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
N Y S+L+T T + G QIH ++ +G+ +S+ +I+MYAK ++D+A K+F
Sbjct: 437 NQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIF 496
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
++ + +SWT +++GY+ + ++AL++F+ M + + + FASA+ A A ++ +
Sbjct: 497 RRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALD 556
Query: 559 TGKQVH 576
G+Q+H
Sbjct: 557 QGRQIH 562
Score = 62.0 bits (149), Expect = 1e-07
Identities = 33/104 (31%), Positives = 56/104 (53%)
Frame = +1
Query: 265 QIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHTRESISWTTLLSGYSHNG 444
QIHA ITSG+ + + N +I++Y K + +A+KVF+ + R+S+SW ++SG S NG
Sbjct: 185 QIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNG 244
Query: 445 NASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQVH 576
+A+ +F ++ L A + + GKQ+H
Sbjct: 245 YEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLH 274
Score = 58.9 bits (141), Expect = 9e-07
Identities = 32/118 (27%), Positives = 58/118 (49%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
+ S + +++ G+QIH + +GY + +SN +I +YAKC +D+
Sbjct: 643 FGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD--------- 693
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTG 564
ISW ++++GYS +G +AL +FE M + N F L A +++ + G
Sbjct: 694 ----ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEG 747
>ref|XP_004233816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum lycopersicum]
Length = 1057
Score = 103 bits (258), Expect = 2e-20
Identities = 48/122 (39%), Positives = 75/122 (61%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
+AS + ++L QGRQIHA + SGY+ + N +I +YA+C ++ +A FDK+
Sbjct: 587 FASAISACAGIQALYQGRQIHAQSVMSGYSLDHSIGNALIFLYARCGKIQDAYAAFDKID 646
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
T++ ISW L+SG++ +G +AL VF R+H + N F + SA+ A AN I+ GKQ
Sbjct: 647 TKDIISWNGLVSGFAQSGFCEEALKVFSRLHGDGVEANMFTYGSAVSAAANTTNIKQGKQ 706
Query: 571 VH 576
+H
Sbjct: 707 IH 708
Score = 82.0 bits (201), Expect = 1e-13
Identities = 42/127 (33%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLI-TSGYANIRVLSNTVINMYAKCRRMDNARKV 375
N Y S+L T T +L G QIH+ ++ T + N+ V S +I+MYAK ++D A K+
Sbjct: 482 NQYTYPSILRTCTSVGALYLGEQIHSQVLKTCFWQNVYVCS-VLIDMYAKHEKLDAAEKI 540
Query: 376 FDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKI 555
F +++ + +SWT++++GY+ + +AL +F M + + + FASA+ A A ++ +
Sbjct: 541 FWRLNEEDVVSWTSMIAGYAQHDFFVEALKLFREMQDRGIRSDNIGFASAISACAGIQAL 600
Query: 556 QTGKQVH 576
G+Q+H
Sbjct: 601 YQGRQIH 607
Score = 80.1 bits (196), Expect = 4e-13
Identities = 36/118 (30%), Positives = 66/118 (55%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
Y S + +++QG+QIHA + +GY SN +I +YAKC + +ARK F +M
Sbjct: 688 YGSAVSAAANTTNIKQGKQIHARIKKTGYNAETEASNILITLYAKCGSLVDARKEFLEMQ 747
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTG 564
+ +SW +++GYS +G ++A+++FE M + + N + L A +++ + G
Sbjct: 748 NKNDVSWNAMITGYSQHGCGNEAIELFEEMRHLGVKPNHVTYLGVLSACSHVGLVDKG 805
Score = 75.9 bits (185), Expect = 7e-12
Identities = 38/122 (31%), Positives = 72/122 (59%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
++SV+ TK ++ G Q+HA + G+ + +SN ++ +Y++C + A +VF +M
Sbjct: 284 FSSVISASTKIEAFNLGEQLHASIYKWGFLSNVFVSNALVTLYSRCGYLTLAEQVFVEMP 343
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
++ +++ +L+SG S G + AL +FE+M S + + AS L A A+L +Q G+Q
Sbjct: 344 QKDGVTYNSLISGLSLKGFSDKALQLFEKMQLSSLKPDCVTIASLLGACASLGALQKGRQ 403
Query: 571 VH 576
+H
Sbjct: 404 LH 405
Score = 69.7 bits (169), Expect = 5e-10
Identities = 30/121 (24%), Positives = 62/121 (51%)
Frame = +1
Query: 214 ASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHT 393
AS+L +LQ+GRQ+H++ +G + ++ +++++Y KC ++ A K F
Sbjct: 386 ASLLGACASLGALQKGRQLHSYATKAGLCSDSIIEGSLLDLYVKCSDIETAHKFFLGSQM 445
Query: 394 RESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
+ W +L GY G+ ++ +F M + NQ+ + S L+ ++ + G+Q+
Sbjct: 446 ENIVLWNVMLVGYGQMGDLDESFKIFSLMQFKGLQPNQYTYPSILRTCTSVGALYLGEQI 505
Query: 574 H 576
H
Sbjct: 506 H 506
Score = 68.6 bits (166), Expect = 1e-09
Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Frame = +1
Query: 211 YASVLETVTKKKS---LQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFD 381
++ VL+ + K+ +Q QIHA + G ++SN +I++Y+K +D+A++VF+
Sbjct: 180 FSEVLQACSGNKAAFRIQGVEQIHALITRYGLGLQLIVSNRLIDLYSKNGFVDSAKQVFE 239
Query: 382 KMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQT 561
M R+S SW +LSG+ N DA+ +++ M + + F+S + A +
Sbjct: 240 DMVVRDSSSWVAMLSGFCKNNREEDAILLYKDMRKFGVIPTPYVFSSVISASTKIEAFNL 299
Query: 562 GKQVH 576
G+Q+H
Sbjct: 300 GEQLH 304
>ref|XP_006347148.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum tuberosum]
Length = 1057
Score = 103 bits (257), Expect = 3e-20
Identities = 49/122 (40%), Positives = 74/122 (60%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
+AS + ++L QGRQIHA + SGY+ L N +I +YA+C ++ +A FDK+
Sbjct: 587 FASAISACAGIQALYQGRQIHAQSVMSGYSLDHSLGNALIFLYARCGKIQDAYAAFDKID 646
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
T++ ISW L+SG++ +G +AL VF R+H + N F + SA+ A AN I+ GKQ
Sbjct: 647 TKDIISWNGLVSGFAQSGFCEEALKVFSRLHGDGVEANMFTYGSAVSAAANTTNIKQGKQ 706
Query: 571 VH 576
H
Sbjct: 707 TH 708
Score = 85.9 bits (211), Expect = 7e-15
Identities = 39/126 (30%), Positives = 76/126 (60%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
N Y S+L T T +L G QIH+ ++ +G+ + + +I+MYAK ++D A K+F
Sbjct: 482 NQYTYPSILRTCTSVGALYLGEQIHSQVLKTGFWQNVYVCSVLIDMYAKHEKLDAAEKIF 541
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
+++ + +SWT++++GY+ + +AL +F +M + + + FASA+ A A ++ +
Sbjct: 542 WRLNEEDVVSWTSMIAGYAQHDFFVEALKLFRKMQDHGIRSDNIGFASAISACAGIQALY 601
Query: 559 TGKQVH 576
G+Q+H
Sbjct: 602 QGRQIH 607
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/118 (30%), Positives = 66/118 (55%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
Y S + +++QG+Q HA +I +GY SN +I +YAKC + +ARK F +M
Sbjct: 688 YGSAVSAAANTTNIKQGKQTHARIIKTGYNAETEASNILITLYAKCGSLVDARKEFLEMQ 747
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTG 564
+ +SW +++GYS +G ++A+++FE M + + N + L A +++ + G
Sbjct: 748 NKNDVSWNAMITGYSQHGCGNEAIELFEEMRHLGVKPNHVTYLGVLSACSHVGLVDKG 805
Score = 75.9 bits (185), Expect = 7e-12
Identities = 38/122 (31%), Positives = 72/122 (59%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
++SV+ TK ++ G Q+H+ + G+ + +SN ++ +Y++C + A KVF +M
Sbjct: 284 FSSVISASTKMEAFNLGGQLHSSIYKWGFLSNVFVSNALVTLYSRCGYLTLAEKVFVEMP 343
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
++ +++ +L+SG S G + AL +FE+M S + + AS L A A+L +Q G+Q
Sbjct: 344 HKDGVTYNSLISGLSLKGFSDKALQLFEKMQLSSLKPDCVTIASLLGACASLGALQKGRQ 403
Query: 571 VH 576
+H
Sbjct: 404 LH 405
Score = 67.8 bits (164), Expect = 2e-09
Identities = 29/121 (23%), Positives = 61/121 (50%)
Frame = +1
Query: 214 ASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHT 393
AS+L +LQ+GRQ+H++ +G + ++ +++++Y KC ++ A F
Sbjct: 386 ASLLGACASLGALQKGRQLHSYATKAGLCSDSIIEGSLLDLYVKCSDIETAHNFFLGSQM 445
Query: 394 RESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
+ W +L GY G+ ++ +F M + NQ+ + S L+ ++ + G+Q+
Sbjct: 446 ENIVLWNVMLVGYGQMGDLDESFKIFSLMQFKGLQPNQYTYPSILRTCTSVGALYLGEQI 505
Query: 574 H 576
H
Sbjct: 506 H 506
Score = 66.2 bits (160), Expect = 6e-09
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGR---QIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFD 381
++ VL+ + K+ + R QIHA + G ++SN +I++Y+K +D+A+ VF+
Sbjct: 180 FSEVLQACSDNKAAFRFRGVEQIHALVTRYGLGLQLIVSNRLIDLYSKNGFVDSAKLVFE 239
Query: 382 KMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQT 561
M R+S SW +LSG+ N DA+ +++ M + + F+S + A +
Sbjct: 240 DMMVRDSSSWVAMLSGFCKNNREEDAILLYKEMRTFGVIPTPYVFSSVISASTKMEAFNL 299
Query: 562 GKQVH 576
G Q+H
Sbjct: 300 GGQLH 304
>ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein
SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 103 bits (256), Expect = 4e-20
Identities = 47/122 (38%), Positives = 76/122 (62%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
++S L T + QGR+I A + SGYA+ ++ N +INMY+KC +++ARKVFD++
Sbjct: 166 FSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK 225
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
R+ I+W T++SGY+ G A+ AL++F+RM + N F L A NL ++ G+
Sbjct: 226 NRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRA 285
Query: 571 VH 576
+H
Sbjct: 286 IH 287
Score = 92.0 bits (227), Expect = 1e-16
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Frame = +1
Query: 163 QQTTPNDQTGSQNHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYA 342
Q+ PND N + +L T + L+QGR IH + GY + V+ N ++NMY
Sbjct: 253 QRMGPNDP--KPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYT 310
Query: 343 KCRR-MDNARKVFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFA 519
KC ++ AR+VF++M TR+ I+W L+ Y G A DALD+F++M + N+ +
Sbjct: 311 KCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLS 370
Query: 520 SALKAVANLRKIQTGKQVH 576
+ L A A L + GK VH
Sbjct: 371 NVLSACAVLGAKRQGKAVH 389
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Frame = +1
Query: 235 TKKKSLQQGRQIHAHLITSGYANIRVLSNT-VINMYAKCRRMDNARKVFDKMHTRESISW 411
+ K L+QG+ +HA ++ + ++ T +I MYA+CR ++ ARK FD+M + ++W
Sbjct: 69 SSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTW 128
Query: 412 TTLLSGYSHNGNASDALDVFERMHNSR---MTINQFAFASALKAVANLRKIQTGKQV 573
L++GYS NG+ AL +++ M + M + F+SAL A + I G+++
Sbjct: 129 NALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREI 185
Score = 59.7 bits (143), Expect = 5e-07
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Frame = +1
Query: 154 VSLQQTTPNDQTGSQNHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRV-LSNTVI 330
+ L+ PN+ T S +VL + +QG+ +HA LI SG V L N+++
Sbjct: 357 MQLENVAPNEITLS-------NVLSACAVLGAKRQGKAVHA-LIASGRCKADVVLENSLM 408
Query: 331 NMYAKCRRMDNARKVFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQF 510
NMY +C +D+ VF + + +SW+TL++ Y+ +G++ L+ F + + +
Sbjct: 409 NMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDV 468
Query: 511 AFASALKAVANLRKIQTGKQ 570
S L A ++ ++ G Q
Sbjct: 469 TMVSTLSACSHGGMLKEGVQ 488
>ref|XP_006296670.1| hypothetical protein CARUB_v10016279mg [Capsella rubella]
gi|482565379|gb|EOA29568.1| hypothetical protein
CARUB_v10016279mg [Capsella rubella]
Length = 717
Score = 102 bits (255), Expect = 5e-20
Identities = 52/123 (42%), Positives = 79/123 (64%)
Frame = +1
Query: 208 WYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKM 387
+Y +L+ T + QGR +HAHLI S + + V+ NT++NMYAKC ++ ARKVFD+M
Sbjct: 71 FYNMLLKKCTVFNLITQGRIVHAHLIQSIFRHDLVMYNTLLNMYAKCGSLEEARKVFDQM 130
Query: 388 HTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGK 567
R+ ++WTTL+SGYS +G + DAL +F +M + N+F +S +KA A + G
Sbjct: 131 PHRDFVTWTTLISGYSQHGRSRDALLLFNQMVGFGFSPNEFTLSSVIKAAAAETRGCIGH 190
Query: 568 QVH 576
Q+H
Sbjct: 191 QLH 193
Score = 86.3 bits (212), Expect = 5e-15
Identities = 42/124 (33%), Positives = 74/124 (59%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
+H YAS+ + L+QG+ +HA++I SG + NT+++MYAK +D+ARK+F
Sbjct: 270 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIDDARKIF 329
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
D++ R+ +SW +LL+ Y+ +G ++A+ FE M + N+ +F S L A ++ +
Sbjct: 330 DRLAKRDVVSWNSLLTAYAQHGFGNEAVYWFEEMRRGGIRPNEISFLSVLTACSHSGLLD 389
Query: 559 TGKQ 570
G Q
Sbjct: 390 EGWQ 393
Score = 64.7 bits (156), Expect = 2e-08
Identities = 33/128 (25%), Positives = 66/128 (51%)
Frame = +1
Query: 193 SQNHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARK 372
S N +SV++ + G Q+H I G+ + + + ++++Y + MD+A+
Sbjct: 167 SPNEFTLSSVIKAAAAETRGCIGHQLHGFCIKCGFDSNVHVGSALLDLYTRYGLMDDAQL 226
Query: 373 VFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRK 552
VFD + +R +SW L++G++ AL++F+ M + F++AS A ++
Sbjct: 227 VFDALESRNDVSWNALIAGHARRCGTEKALELFQHMLRDGFRPSHFSYASLFGACSSTGF 286
Query: 553 IQTGKQVH 576
++ GK VH
Sbjct: 287 LEQGKWVH 294
>gb|ESW23833.1| hypothetical protein PHAVU_004G079600g [Phaseolus vulgaris]
Length = 1052
Score = 102 bits (254), Expect = 7e-20
Identities = 45/122 (36%), Positives = 77/122 (63%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
+AS + +L QG+QIHA GY++ + N ++ +YA+C ++ A FDK+
Sbjct: 595 FASAISACAGILALNQGQQIHAQACVCGYSDDISVGNALVGLYARCGKVRQAYFAFDKIF 654
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
+++ISW +L+SG++ +G+ DAL VF +M+ + + IN F+F A+ A AN+ I+ GKQ
Sbjct: 655 AKDNISWNSLISGFAQSGHCEDALSVFSQMNKAALEINSFSFGPAVSAAANVANIKLGKQ 714
Query: 571 VH 576
+H
Sbjct: 715 IH 716
Score = 82.8 bits (203), Expect = 6e-14
Identities = 38/126 (30%), Positives = 73/126 (57%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
N Y S+L T + K+L G QIH ++ +G+ +S+ +I+MYAK + A K+
Sbjct: 490 NEFTYPSILRTCSSLKALDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGNLYTALKIL 549
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
++ ++ +SWT +++GY+ + +AL++F+ M + + + FASA+ A A + +
Sbjct: 550 RRLKEKDVVSWTAMIAGYAQHEKFVEALNLFKEMQDEGIQSDNIGFASAISACAGILALN 609
Query: 559 TGKQVH 576
G+Q+H
Sbjct: 610 QGQQIH 615
Score = 79.0 bits (193), Expect = 8e-13
Identities = 41/144 (28%), Positives = 76/144 (52%)
Frame = +1
Query: 133 STHHEDSVSLQQTTPNDQTGSQNHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRV 312
S H ED++S+ N N + + +++ G+QIHA ++ +GY +
Sbjct: 671 SGHCEDALSVFSQM-NKAALEINSFSFGPAVSAAANVANIKLGKQIHAMILKTGYDSETE 729
Query: 313 LSNTVINMYAKCRRMDNARKVFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSR 492
+SN +I +YAKC +++A++ F +M + +SW +L+GYS +G+ +AL +FE M
Sbjct: 730 VSNVLITLYAKCGTIEDAKRQFFEMPEKSEVSWNAMLTGYSQHGHGFEALSLFEDMKQLE 789
Query: 493 MTINQFAFASALKAVANLRKIQTG 564
+ N F L A +++ + G
Sbjct: 790 VLPNHVTFVGVLSACSHVGLVDEG 813
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/104 (35%), Positives = 63/104 (60%)
Frame = +1
Query: 265 QIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHTRESISWTTLLSGYSHNG 444
QIHA I+ GY N +SN ++++Y K +++A+KVFD + R+S+SW ++SG S NG
Sbjct: 209 QIHARTISHGYENSLSVSNPLMDLYFKNGFLNSAKKVFDSLQKRDSVSWVAMISGLSQNG 268
Query: 445 NASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQVH 576
+A+ F +MH + + F+S L A ++ + G+Q+H
Sbjct: 269 CEEEAVLRFCQMHTLGVYPTPYIFSSVLSACTKIKLFKLGEQLH 312
Score = 69.3 bits (168), Expect = 7e-10
Identities = 30/121 (24%), Positives = 64/121 (52%)
Frame = +1
Query: 214 ASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHT 393
AS+L + +L G+Q H++ I +G ++ +L +++++Y KC + A + F T
Sbjct: 394 ASLLSACSSGGALLVGKQFHSYAIKAGMSSDIILEGSLLDLYVKCSDIKTAHEFFLSTET 453
Query: 394 RESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
+ W +L Y N +++ +F +M + N+F + S L+ ++L+ + G+Q+
Sbjct: 454 ENVVLWNVMLVAYGQIDNLNESFKIFTQMQMEGIVPNEFTYPSILRTCSSLKALDLGEQI 513
Query: 574 H 576
H
Sbjct: 514 H 514
Score = 67.4 bits (163), Expect = 3e-09
Identities = 34/122 (27%), Positives = 67/122 (54%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
++SVL TK K + G Q+H ++ G+++ + N ++ +Y++ +A +VF+ M
Sbjct: 292 FSSVLSACTKIKLFKLGEQLHGLVLKQGFSSETYVCNALVTLYSRLGNFISAEQVFNAMS 351
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
R+ +S+ +L+SG + G + AL +F++M + + AS L A ++ + GKQ
Sbjct: 352 QRDEVSYNSLISGLAQQGYSDRALGLFKKMRLDCLKPDCVTVASLLSACSSGGALLVGKQ 411
Query: 571 VH 576
H
Sbjct: 412 FH 413
>ref|XP_006574752.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like isoform X1 [Glycine max]
gi|571439084|ref|XP_006574753.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X2 [Glycine max]
gi|571439086|ref|XP_006574754.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X3 [Glycine max]
gi|571439088|ref|XP_006574755.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X4 [Glycine max]
gi|571439090|ref|XP_006574756.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X5 [Glycine max]
Length = 1082
Score = 102 bits (253), Expect = 9e-20
Identities = 45/132 (34%), Positives = 83/132 (62%)
Frame = +1
Query: 181 DQTGSQNHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMD 360
DQ ++ +AS + ++L QG+QIHA SGY++ + N ++++YA+C ++
Sbjct: 602 DQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVR 661
Query: 361 NARKVFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVA 540
+A FDK+ ++++ISW +L+SG++ +G+ +AL +F +M + IN F F A+ A A
Sbjct: 662 DAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAA 721
Query: 541 NLRKIQTGKQVH 576
N+ ++ GKQ+H
Sbjct: 722 NVANVKLGKQIH 733
Score = 89.4 bits (220), Expect = 6e-16
Identities = 38/126 (30%), Positives = 79/126 (62%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
N Y S+L T + +++ G QIH ++ +G+ +S+ +I+MYAK ++D+A K+F
Sbjct: 507 NQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIF 566
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
++ ++ +SWT +++GY+ + ++AL++F+ M + + + FASA+ A A ++ +
Sbjct: 567 RRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALN 626
Query: 559 TGKQVH 576
G+Q+H
Sbjct: 627 QGQQIH 632
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/104 (36%), Positives = 63/104 (60%)
Frame = +1
Query: 265 QIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHTRESISWTTLLSGYSHNG 444
+IHA IT GY N + N +I++Y K +++A+KVFD + R+S+SW +LSG S +G
Sbjct: 226 KIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSG 285
Query: 445 NASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQVH 576
+A+ +F +MH S + + F+S L A + + G+Q+H
Sbjct: 286 CEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLH 329
Score = 77.0 bits (188), Expect = 3e-12
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = +1
Query: 133 STHHEDSVSLQQTTPNDQTGSQ-NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIR 309
S H E+++SL + + G + N + + +++ G+QIHA +I +G+ +
Sbjct: 688 SGHCEEALSL--FSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSET 745
Query: 310 VLSNTVINMYAKCRRMDNARKVFDKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNS 489
+SN +I +YAKC +D+A + F +M + ISW +L+GYS +G+ AL +FE M
Sbjct: 746 EVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQL 805
Query: 490 RMTINQFAFASALKAVANLRKIQTG 564
+ N F L A +++ + G
Sbjct: 806 GVLPNHVTFVGVLSACSHVGLVDEG 830
Score = 70.1 bits (170), Expect = 4e-10
Identities = 32/121 (26%), Positives = 63/121 (52%)
Frame = +1
Query: 214 ASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHT 393
AS+L + +L G+Q H++ I +G ++ +L ++++Y KC + A + F T
Sbjct: 411 ASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTET 470
Query: 394 RESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
+ W +L Y N +++ +F +M + NQF + S L+ ++LR + G+Q+
Sbjct: 471 ENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQI 530
Query: 574 H 576
H
Sbjct: 531 H 531
Score = 65.9 bits (159), Expect = 7e-09
Identities = 34/122 (27%), Positives = 67/122 (54%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
++SVL TK + + G Q+H ++ G++ + N ++ +Y++ A +VF+ M
Sbjct: 309 FSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAML 368
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
R+ +S+ +L+SG S G + AL++F++M + + AS L A +++ + GKQ
Sbjct: 369 QRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ 428
Query: 571 VH 576
H
Sbjct: 429 FH 430
>ref|XP_002319164.2| pentatricopeptide repeat-containing family protein, partial
[Populus trichocarpa] gi|550325034|gb|EEE95087.2|
pentatricopeptide repeat-containing family protein,
partial [Populus trichocarpa]
Length = 928
Score = 102 bits (253), Expect = 9e-20
Identities = 46/122 (37%), Positives = 77/122 (63%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
++S + ++L QGRQIHA SGY+ + N ++++YA+C R+ A F+K+
Sbjct: 449 FSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKID 508
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
++SISW L+SG++ +G DAL VF +M+ +++ + F F SA+ A AN+ I+ GKQ
Sbjct: 509 AKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQ 568
Query: 571 VH 576
+H
Sbjct: 569 IH 570
Score = 84.7 bits (208), Expect = 2e-14
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Frame = +1
Query: 88 RSWKNTSLGTVATNISTHHEDSVSLQQTTPNDQTGSQNHDWYASVLETVTKKK-SLQQGR 264
RSW G + +S D S ++ S +ASVL + + ++
Sbjct: 7 RSWDKIISGFMEKKMSNRVLDLFSCMI----EENVSPTEISFASVLRACSGHRIGIRYAE 62
Query: 265 QIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHTRESISWTTLLSGYSHNG 444
QIHA +I G ++SN +I +YAK + +ARKVFD + T++S+SW ++SG+S NG
Sbjct: 63 QIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNG 122
Query: 445 NASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQVH 576
+A+ +F MH + + + F+S L ++ G+Q+H
Sbjct: 123 YEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLH 166
Score = 80.1 bits (196), Expect = 4e-13
Identities = 40/126 (31%), Positives = 70/126 (55%)
Frame = +1
Query: 199 NHDWYASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVF 378
N Y S+L T T +L G QIH +I +G+ + + +I+MYAK ++D A +
Sbjct: 344 NQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVIL 403
Query: 379 DKMHTRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQ 558
+ + +SWT L+SGY+ + ++AL F+ M N + + F+SA+ A A ++ +
Sbjct: 404 RTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALN 463
Query: 559 TGKQVH 576
G+Q+H
Sbjct: 464 QGRQIH 469
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/118 (29%), Positives = 67/118 (56%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
+ S + +++QG+QIHA +I G+ + +SN +I YAKC +++AR+ F +M
Sbjct: 550 FGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMP 609
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTG 564
+ +SW +++GYS +G ++A+++FE+M N F L A +++ + G
Sbjct: 610 EKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKG 667
Score = 67.4 bits (163), Expect = 3e-09
Identities = 36/122 (29%), Positives = 66/122 (54%)
Frame = +1
Query: 211 YASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMH 390
++SVL TK K G Q+HA + G + + N ++ +Y++ +A KVF KM
Sbjct: 146 FSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQ 205
Query: 391 TRESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQ 570
+++ +S+ +L+SG + G + AL++F +M + + AS L A A+ + G+Q
Sbjct: 206 SKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQ 265
Query: 571 VH 576
+H
Sbjct: 266 LH 267
Score = 65.9 bits (159), Expect = 7e-09
Identities = 28/121 (23%), Positives = 62/121 (51%)
Frame = +1
Query: 214 ASVLETVTKKKSLQQGRQIHAHLITSGYANIRVLSNTVINMYAKCRRMDNARKVFDKMHT 393
AS+L +L +G Q+H+++I +G ++ ++ ++++Y C + A ++F T
Sbjct: 248 ASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQT 307
Query: 394 RESISWTTLLSGYSHNGNASDALDVFERMHNSRMTINQFAFASALKAVANLRKIQTGKQV 573
+ W +L + N S++ +F +M + NQF + S L+ ++ + G+Q+
Sbjct: 308 ENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQI 367
Query: 574 H 576
H
Sbjct: 368 H 368