BLASTX nr result

ID: Ephedra28_contig00014451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00014451
         (564 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522787.1| Proliferating-cell nucleolar antigen p120, p...    63   6e-08
gb|ABR18374.1| unknown [Picea sitchensis] gi|224286369|gb|ACN408...    60   4e-07
ref|XP_006857786.1| hypothetical protein AMTR_s00061p00211510 [A...    58   2e-06
ref|XP_004498149.1| PREDICTED: putative ribosomal RNA methyltran...    56   5e-06
ref|XP_006474842.1| PREDICTED: putative ribosomal RNA methyltran...    55   9e-06

>ref|XP_002522787.1| Proliferating-cell nucleolar antigen p120, putative [Ricinus
           communis] gi|223538025|gb|EEF39638.1| Proliferating-cell
           nucleolar antigen p120, putative [Ricinus communis]
          Length = 624

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
 Frame = +2

Query: 2   VHNMDGFFVXXXXXXXXXXXXXXXXXIEKGVHSSVEDQDEMQQKNSLDNPKEKVNVT--- 172
           VHNMDGFFV                   + V  + E  +   +KN+ +  K+K  V    
Sbjct: 500 VHNMDGFFVAKLKKMSNSIPTAESSEPLESVEQASESNESKSEKNTAEPLKKKSVVKIEK 559

Query: 173 AATDDG-GLSNA-SDGKKLKKAFLSRKELKRKFPSKEEICKSREEKREALRKKIKTLEVD 346
            A + G GLSN  SD   +K A  ++   KRKFPS+++I K REEKR+ALR ++K  E  
Sbjct: 560 GAREKGKGLSNGVSDNGNVKSATAAKNTKKRKFPSRDDISKIREEKRKALR-EVKNKEAR 618

Query: 347 SNMNKK 364
            +  K+
Sbjct: 619 KSRRKE 624


>gb|ABR18374.1| unknown [Picea sitchensis] gi|224286369|gb|ACN40892.1| unknown
           [Picea sitchensis]
          Length = 641

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
 Frame = +2

Query: 2   VHNMDGFFVXXXXXXXXXXXXXXXXXIEKGVHSSVEDQD-EMQQKNSLDNPKEKVNVTAA 178
           VHNMDGFFV                   + + + VE++D E+   N + +  E++    A
Sbjct: 496 VHNMDGFFVAKLKKMSNTKPISKATEAGENIPNIVENKDGEINDGNIVTDQSERLYTETA 555

Query: 179 TDDGGLSNASDGKKLKKAFLSRKELKRKFPSKEEICKSREEKREALRK 322
                ++ +S+ K +K     +++ K+K PSKEEI KSREEKR+ALRK
Sbjct: 556 L----INESSETKMIKANKHDKRQGKKKLPSKEEISKSREEKRKALRK 599


>ref|XP_006857786.1| hypothetical protein AMTR_s00061p00211510 [Amborella trichopoda]
           gi|548861882|gb|ERN19253.1| hypothetical protein
           AMTR_s00061p00211510 [Amborella trichopoda]
          Length = 671

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
 Frame = +2

Query: 2   VHNMDGFFVXXXXXXXXXXXXXXXXX-------IEKGVHSSVEDQDEMQQKNSLDN---- 148
           VHNMDGFFV                        I K  +S  +++    +   L+N    
Sbjct: 497 VHNMDGFFVAKLRKLSNSKREQNPNDASETTEEIPKANNSETQEEVPKAEPQQLENGNNH 556

Query: 149 ------PKEKVNVTAATDDGGLSNASDGKKLKKAFLSRKELK--RKFPSKEEICKSREEK 304
                  +EK  +     +G  +N       ++   SRKE K  RKFPS EEI ++REEK
Sbjct: 557 TKNPMKKREKKQIKKGAKEGQKTNEDVKNTREEKPTSRKEFKEKRKFPSPEEISRAREEK 616

Query: 305 REALRKKIKTLEVDSNMNKKELNNQSVIKGEKKNKSAKKQ 424
           REA+RK+ K L +    ++ E   Q   K E++ K  K++
Sbjct: 617 REAMRKR-KALGISDPSSQVE--KQQPPKSEREEKRVKRR 653


>ref|XP_004498149.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           isoform X2 [Cicer arietinum]
          Length = 623

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 44/128 (34%), Positives = 58/128 (45%), Gaps = 20/128 (15%)
 Frame = +2

Query: 2   VHNMDGFFVXXXXXXXXXXXXXXXXXIEKGVHSSVEDQDEMQQKNSLDNPKEKVNVTAAT 181
           VHNMDGFFV                   K   +S +D++E +  N  D P   +      
Sbjct: 495 VHNMDGFFVAKLKKMSNSKPGA------KPSETSEKDEEETKLVNDDDKPSNDIK----- 543

Query: 182 DDGGLSNASDGKKLKKAFL--------------------SRKELKRKFPSKEEICKSREE 301
           ++G  S+ASD KK KK  L                    S+K  KR+ PS+EEI K+REE
Sbjct: 544 ENGKQSSASDSKKRKKEKLPSKPSNNDVKANVKEASEPESKKRKKRQLPSREEISKTREE 603

Query: 302 KREALRKK 325
           KR AL +K
Sbjct: 604 KRLALIEK 611


>ref|XP_006474842.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Citrus sinensis]
          Length = 632

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
 Frame = +2

Query: 2   VHNMDGFFVXXXXXXXXXXXXXXXXXIEKGVH-----SSVEDQDEMQQKNSLDNPKEKVN 166
           VHNMDGFFV                   + V      S+V + D+  ++NS     +K  
Sbjct: 505 VHNMDGFFVAKLKKMSNSKKTSAGPQPSETVEQQTPESNVSNGDKKTEENSEQVLMKKAT 564

Query: 167 VTAATDDGGLSNASDGKKLKKAFLSRKELKRKFPSKEEICKSREEKREALRKKIKTLEVD 346
             A       S  ++   ++     ++  KRKFPS+EEI K REEKR+ LR+K+ + +  
Sbjct: 565 TKAKDLKKKTSGLAENGNVESPSNEKRRKKRKFPSREEISKVREEKRKTLREKVSSKKAG 624

Query: 347 SNMNKKELNNQ 379
           S    K++ N+
Sbjct: 625 S----KDIGNE 631


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