BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00014431
         (456 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004960345.1| PREDICTED: exonuclease V, chloroplastic-like...    69   5e-10
dbj|BAJ96468.1| predicted protein [Hordeum vulgare subsp. vulgare]     61   2e-07
ref|XP_002440510.1| hypothetical protein SORBIDRAFT_09g002220 [S...    60   3e-07
ref|XP_006280574.1| hypothetical protein CARUB_v10026530mg [Caps...    58   2e-06
gb|AAS72366.2| unknown protein [Oryza sativa Japonica Group]           57   3e-06
gb|AAV33310.1| unknown protein [Oryza sativa Japonica Group]           57   3e-06
ref|NP_200845.1| uncharacterized protein [Arabidopsis thaliana] ...    56   4e-06
dbj|BAD43207.1| unknown protein [Arabidopsis thaliana] gi|519719...    56   4e-06
ref|XP_002864682.1| hypothetical protein ARALYDRAFT_496175 [Arab...    56   4e-06

>ref|XP_004960345.1| PREDICTED: exonuclease V, chloroplastic-like [Setaria italica]
          Length = 365

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 46/104 (44%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
 Frame = +3

Query: 168 RAAVPVETVSEEEMAWIEEAMXXXXXXXXXXXXXXXXX----PLIRSCAQISSASLDVEE 335
           R  +PVE VS+EEMA I+ A+                     PL  SCA  S+A  D+E+
Sbjct: 11  RQELPVEVVSDEEMALIDAALAAAAAAGARPLLSSAARRAAAPL--SCAAYSAAGGDIED 68

Query: 336 SPFHRH---CRTR-RRALAVTDITSAEWCEMQMDLTLTHGRQKR 455
           SP  R     R R RRALAVTDIT+ EWCE QM+  L HG+ +R
Sbjct: 69  SPLPRRSLLARFRERRALAVTDITATEWCEKQMEFVLEHGKPER 112


>dbj|BAJ96468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 351

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/96 (41%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
 Frame = +3

Query: 183 VETVSEEEMAWIEEAMXXXXXXXXXXXXXXXXXPLIRSCAQISSASLDVEES--PFHRHC 356
           VE VS+EEMA IE A+                     SCA    A  D+E+S  P  R  
Sbjct: 4   VEIVSDEEMAMIEAALAAATAARPLLSAAAVRGAATLSCAAFPPAG-DIEDSAPPPRRSL 62

Query: 357 RTR---RRALAVTDITSAEWCEMQMDLTLTHGRQKR 455
            +R   RRALAVTDIT+ EWC+ QM+  L HG+ +R
Sbjct: 63  LSRFRERRALAVTDITATEWCDKQMEFVLEHGKPER 98


>ref|XP_002440510.1| hypothetical protein SORBIDRAFT_09g002220 [Sorghum bicolor]
           gi|241945795|gb|EES18940.1| hypothetical protein
           SORBIDRAFT_09g002220 [Sorghum bicolor]
          Length = 374

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
 Frame = +3

Query: 180 PVETVSEEEMAWIEEAMXXXXXXXXXXXXXXXXXPLIRS-CAQISSASLDVEESPFHRHC 356
           PV+ VS+EEMA I+ A+                   +   CA    A+ D+E++P  R  
Sbjct: 25  PVDIVSDEEMALIDAALAAAAAGARPLLSAAARRAAVPLFCAAYPPAAGDIEDTPLPRRS 84

Query: 357 RT----RRRALAVTDITSAEWCEMQMDLTLTHGRQKR 455
           R      RRALAVTDIT+ EWCE QM+  L  G+ ++
Sbjct: 85  RLARFRERRALAVTDITATEWCEKQMEFVLERGKPEK 121


>ref|XP_006280574.1| hypothetical protein CARUB_v10026530mg [Capsella rubella]
           gi|482549278|gb|EOA13472.1| hypothetical protein
           CARUB_v10026530mg [Capsella rubella]
          Length = 400

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
 Frame = +3

Query: 177 VPVETVSEEEMAWIEEAMXXXXXXXXXXXXXXXXXPLIR-------------SCAQISSA 317
           +P+E VSEEEMA ++ A+                  +I              S  + S+A
Sbjct: 27  IPIEIVSEEEMAILDAALAATRSILPSALRSASPSRVIAGGSPKNIRSITLFSKRKFSAA 86

Query: 318 SLDVEESPFHRHCRTRRRALAVTDITSAEWCEMQMDLTLTHGRQK 452
             D+EES  HR    R +AL VTD+TS EWCE QM+  L  GR+K
Sbjct: 87  CSDIEESYLHRF--RRNQALGVTDLTSTEWCEKQMENVLCFGRRK 129


>gb|AAS72366.2| unknown protein [Oryza sativa Japonica Group]
          Length = 308

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
 Frame = +3

Query: 177 VPVETVSEEEMAWIEEAMXXXXXXXXXXXXXXXXXPLIR--SCAQISSASL-DVEESPFH 347
           +PVE VS+EEMA IE A+                   ++  SCA  S+AS  D+E+SP  
Sbjct: 20  LPVEIVSDEEMALIEAALSAAAAASRPVLSSAAARRAVQLSSCAAYSAASGGDIEDSPPL 79

Query: 348 RHCRTR--------RRALAVTDITSAEWCEMQMDLTLTHGR 446
              R          RRALAVTDIT+ EWC+ Q +  L HG+
Sbjct: 80  PTPRRGSLLARFRDRRALAVTDITATEWCDKQQEFVLEHGK 120


>gb|AAV33310.1| unknown protein [Oryza sativa Japonica Group]
          Length = 314

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
 Frame = +3

Query: 177 VPVETVSEEEMAWIEEAMXXXXXXXXXXXXXXXXXPLIR--SCAQISSASL-DVEESPFH 347
           +PVE VS+EEMA IE A+                   ++  SCA  S+AS  D+E+SP  
Sbjct: 20  LPVEIVSDEEMALIEAALSAAAAASRPVLSSAAARRAVQLSSCAAYSAASGGDIEDSPPL 79

Query: 348 RHCRTR--------RRALAVTDITSAEWCEMQMDLTLTHGR 446
              R          RRALAVTDIT+ EWC+ Q +  L HG+
Sbjct: 80  PTPRRGSLLARFRDRRALAVTDITATEWCDKQQEFVLEHGK 120


>ref|NP_200845.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75171272|sp|Q9FKK6.1|EXO5_ARATH RecName:
           Full=Exonuclease V, chloroplastic; Short=Exo V; Flags:
           Precursor gi|9757741|dbj|BAB08222.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|18175767|gb|AAL59924.1| unknown protein [Arabidopsis
           thaliana] gi|23296592|gb|AAN13127.1| unknown protein
           [Arabidopsis thaliana] gi|332009933|gb|AED97316.1|
           uncharacterized protein AT5G60370 [Arabidopsis thaliana]
          Length = 413

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/104 (37%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
 Frame = +3

Query: 177 VPVETVSEEEMAWIEEAMXXXXXXXXXXXXXXXXXPL--------IRSCAQIS----SAS 320
           +P+E VSEEEMA ++ A+                  +        IRS    S    SA 
Sbjct: 42  IPIEIVSEEEMAILDAALAASRSILPSVIRSVSPSRITAGGSPKTIRSITLFSKRKLSAC 101

Query: 321 LDVEESPFHRHCRTRRRALAVTDITSAEWCEMQMDLTLTHGRQK 452
            D+EES  HR    R +AL VTD+T  EWCE QM+  L  GR+K
Sbjct: 102 SDIEESYLHRF--RRNQALGVTDLTGTEWCEKQMENVLCFGRRK 143


>dbj|BAD43207.1| unknown protein [Arabidopsis thaliana] gi|51971993|dbj|BAD44661.1|
           unknown protein [Arabidopsis thaliana]
          Length = 413

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/104 (37%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
 Frame = +3

Query: 177 VPVETVSEEEMAWIEEAMXXXXXXXXXXXXXXXXXPL--------IRSCAQIS----SAS 320
           +P+E VSEEEMA ++ A+                  +        IRS    S    SA 
Sbjct: 42  IPIEIVSEEEMAILDAALAASRSILPSVIRSVSPSRITAGGSPKTIRSITLFSKRKLSAC 101

Query: 321 LDVEESPFHRHCRTRRRALAVTDITSAEWCEMQMDLTLTHGRQK 452
            D+EES  HR    R +AL VTD+T  EWCE QM+  L  GR+K
Sbjct: 102 SDIEESYLHRF--RRNQALGVTDLTGTEWCEKQMENVLCFGRRK 143


>ref|XP_002864682.1| hypothetical protein ARALYDRAFT_496175 [Arabidopsis lyrata subsp.
           lyrata] gi|297310517|gb|EFH40941.1| hypothetical protein
           ARALYDRAFT_496175 [Arabidopsis lyrata subsp. lyrata]
          Length = 409

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/104 (36%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
 Frame = +3

Query: 177 VPVETVSEEEMAWIEEAMXXXXXXXXXXXXXXXXX--------PLIRSCAQIS----SAS 320
           +P+E +SEEEMA ++ A+                          +IRS    S    SA 
Sbjct: 37  IPIEIISEEEMAILDAALAATRSIFPSAIRSASPSRILAGENPKMIRSITLFSKRKLSAC 96

Query: 321 LDVEESPFHRHCRTRRRALAVTDITSAEWCEMQMDLTLTHGRQK 452
            D+EES  HR    R +AL VTD+T  EWCE QM+  L  GR+K
Sbjct: 97  SDIEESYLHRF--RRNQALGVTDLTGTEWCEKQMENVLCFGRRK 138