BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00014275
         (1166 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   147   8e-33
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   140   1e-30
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   137   1e-29
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   136   1e-29
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   136   1e-29
emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]   136   2e-29
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   136   2e-29
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   135   2e-29
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   135   4e-29
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         134   5e-29
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   134   7e-29
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   134   7e-29
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]               134   7e-29
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   134   7e-29
emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]   131   5e-28
ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898...   130   8e-28
emb|CBI37296.3| unnamed protein product [Vitis vinifera]              129   2e-27
gb|ACI62137.1| polyprotein [Drosophila melanogaster]                  129   2e-27
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]   129   2e-27
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   129   2e-27

>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  147 bits (371), Expect = 8e-33
 Identities = 105/354 (29%), Positives = 167/354 (47%), Gaps = 11/354 (3%)
 Frame = +2

Query: 137  KKSYHCKICKIKGHKTWFCWFNP*GPKYDPNKLREFEHKKKRFQPRHEAHIANEEKDVKN 316
            KK   C +C+ +GHK++ C           N+ +    +K    P  +A++A ++ ++  
Sbjct: 277  KKKLVCYVCRKEGHKSYQC-----------NQRKGRPSQK----PTPQANLAEQDSEI-- 319

Query: 317  TEANLANIDEHNIFLMVMEEIKSKWYIDSGCNRHMCNNMKLFHDYIHLQGNSVVKIAGDQ 496
                +A I E N+      E K+ W +D+G +RH C N +L HDY        V +    
Sbjct: 320  ----IAAIVEANLI-----ENKTDWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSA 370

Query: 497  ELQVKSYGNIVLPMNNNGIV-LKNVLYVEGLRKNLVSXXXXXXXXXXXXAGVDNHGKPIC 673
               V   G ++L + +   + L NVLYV  LR+NLVS               D       
Sbjct: 371  TAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDK-----V 425

Query: 674  KIMKQNQVIAKGLEQNGIFVLNSIN---NAECHLTLAEESDMWHKRFGHANFKSLKKLK- 841
             + K    + KG   NG+FVLN+I+   NA     L E +++WH R GH NF S++KLK 
Sbjct: 426  VLTKNGNFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 485

Query: 842  ------LETMEGPKIKVKDGNTYEGFLAVKLHKFPYLERKWRCSKKLQTIHSDICGPIQP 1003
                   ET E  K  V         +  K HK P+   ++R ++ L+ I+SD+      
Sbjct: 486  MRLINTSETHETGKCPV--------CIESKFHKKPFKPVEYRTTELLELIYSDLADFRTT 537

Query: 1004 MSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
             S GGK+Y ++F DD+S  T  ++IK+K+E    F+  +   + ++G +I  LR
Sbjct: 538  ASRGGKNYYVSFVDDYSRFTKIYLIKTKNEAVSMFVKFKAESENQLGKRIKRLR 591


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  140 bits (353), Expect = 1e-30
 Identities = 104/354 (29%), Positives = 161/354 (45%), Gaps = 11/354 (3%)
 Frame = +2

Query: 137  KKSYHCKICKIKGHKTWFCWFNP*GPKYDPNKLREFEHKKKRFQPRHEAHIANEEKDVKN 316
            K +  C  CK  GH    CW                   KK  Q +   ++  EE  VK 
Sbjct: 251  KSNIQCYYCKRFGHVQXECW-------------------KKERQEKQANYVEQEEDQVK- 290

Query: 317  TEANLANIDEHNIFLMVMEEIKSK---WYIDSGCNRHMCNNMKLFHDYIHLQGNSVVKIA 487
                        +F+   EE+ S    W++DSGC+ HM     LF +   L  +  +K+ 
Sbjct: 291  ------------LFMXYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKE---LDESHKLKVK 335

Query: 488  GDQELQVKSYGNIVLPMNN---NGIVLKNVLYVEGLRKNLVSXXXXXXXXXXXXAGVDNH 658
               + QV   G  ++ +NN   N  +L NV ++  L +NL+S              + + 
Sbjct: 336  LGDDKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSI---LFDG 392

Query: 659  GKPICKIMKQNQVIAK-GLEQNGIFVLNSINNAECHLTLAEE---SDMWHKRFGHANFKS 826
               + K  K +Q+I    +  N +F L  +++ E H  + +E   S++WH R+GH N K 
Sbjct: 393  ATCVIKDKKSDQIIVNVRMAANKLFPLE-VSSIEKHALVVKETSESNLWHLRYGHLNVKG 451

Query: 827  LKKLKLETMEGPKIKVKDGNTYEGFLAVKLHKFPYLE-RKWRCSKKLQTIHSDICGPIQP 1003
            LK L  + M     K+   N  EG +  K  K P+ + R  R S  L+ IH+D+CGP+Q 
Sbjct: 452  LKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQT 511

Query: 1004 MSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
             SFGG  Y L FTDD S M+W + ++SK E +  F   +  ++ + G  I +LR
Sbjct: 512  ASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLR 565


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  137 bits (344), Expect = 1e-29
 Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 17/311 (5%)
 Frame = +2

Query: 284  HIANEEKDVKNTE----ANLAN--IDEHNIFLMVM-----EEIKSKWYIDSGCNRHMCNN 430
            H A+E K   N +    AN     I E ++ LM       +E   KWY+DSG + HMC  
Sbjct: 289  HYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGR 348

Query: 431  MKLFHDYIH-LQGNSVVKIAGDQELQVKSYGNIVLPMNNNGI-VLKNVLYVEGLRKNLVS 604
              +F +    ++GN  V +  + +++VK  GNI++ + N     + NV Y+  ++ N++S
Sbjct: 349  KSMFAELDESVRGN--VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILS 406

Query: 605  XXXXXXXXXXXXAGVDNHGKPICKIMKQNQVIAKGLEQNGIFVLNSINN-AEC-HLTLAE 778
                           +N      +  + N +    + +N +FVLN  N+ A+C  +   E
Sbjct: 407  LGQLLEKGYDIRLKDNNLS---IRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKE 463

Query: 779  ESDMWHKRFGHANFKSLKKL-KLETMEGPKIKVKDGNTYEGFLAVKLHKFPY-LERKWRC 952
            ES +WH RFGH NF  L+ L + E + G           EG L  K  K  +  E   R 
Sbjct: 464  ESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRA 523

Query: 953  SKKLQTIHSDICGPIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLK 1132
             K L+ IH+D+CGPI+P S G  +Y L F DDFS  TW + +K K EV+  F   +  ++
Sbjct: 524  QKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVE 583

Query: 1133 IEIGNKIMILR 1165
             E G  I  +R
Sbjct: 584  KESGLVIKTMR 594


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  136 bits (343), Expect = 1e-29
 Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 17/311 (5%)
 Frame = +2

Query: 284  HIANEEKDVKNTE----ANLAN--IDEHNIFLMVM-----EEIKSKWYIDSGCNRHMCNN 430
            H A+E K   N +    AN     I E ++ LM       +E   KWY+DSG + HMC  
Sbjct: 289  HYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGR 348

Query: 431  MKLFHDYIH-LQGNSVVKIAGDQELQVKSYGNIVLPMNNNGI-VLKNVLYVEGLRKNLVS 604
              +F +    ++GN  V +  + +++VK  GNI++ + N     + NV Y+  ++ N++S
Sbjct: 349  KSMFAELDESVRGN--VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILS 406

Query: 605  XXXXXXXXXXXXAGVDNHGKPICKIMKQNQVIAKGLEQNGIFVLNSINN-AEC-HLTLAE 778
                           +N      +  + N +    + +N +FVLN  N+ A+C  +   E
Sbjct: 407  LGQLLEKGYDIRLKDNNLS---IRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKE 463

Query: 779  ESDMWHKRFGHANFKSLKKL-KLETMEGPKIKVKDGNTYEGFLAVKLHKFPY-LERKWRC 952
            ES +WH RFGH NF  L+ L + E + G           EG L  K  K  +  E   R 
Sbjct: 464  ESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRA 523

Query: 953  SKKLQTIHSDICGPIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLK 1132
             K L+ IH+D+CGPI+P S G  +Y L F DDFS  TW + +K K EV+  F   +  ++
Sbjct: 524  QKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVE 583

Query: 1133 IEIGNKIMILR 1165
             E G  I  +R
Sbjct: 584  KESGLVIKTMR 594


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  136 bits (343), Expect = 1e-29
 Identities = 102/352 (28%), Positives = 157/352 (44%), Gaps = 9/352 (2%)
 Frame = +2

Query: 137  KKSYHCKICKIKGHKTWFCWFNP*GPKYDPNKLREFEHKKKRFQPRHEAHIANEEKDVKN 316
            K +  C  CK  GH    CW                   KK  Q +   ++  EE  VK 
Sbjct: 378  KSNIXCYYCKRFGHVQAECW-------------------KKERQEKQANYVEQEEDQVK- 417

Query: 317  TEANLANIDEHNIFLMVMEEIKSK---WYIDSGCNRHMCNNMKLFHDYIHLQGNSVVKIA 487
                        +F+   EE+ S    W++DSGC+ HM     LF + +       VK+ 
Sbjct: 418  ------------LFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKE-LDESHKLXVKLG 464

Query: 488  GDQELQVKSYGNIVLPMNNNGI-VLKNVLYVEGLRKNLVSXXXXXXXXXXXXAGVDNHGK 664
             D ++QV+  G + +   +  + +L NV ++  L + LV             A  D    
Sbjct: 465  DDXQVQVEGKGTVAVNNGHGNVKLLYNVYFIPSLTEKLVKCG----------ATYDK--- 511

Query: 665  PICKIMKQNQVIAK-GLEQNGIFVLNSINNAECHLTLAEE---SDMWHKRFGHANFKSLK 832
                  K +Q+I    +  N +F L  +++ E H  + +E   S++WH R+GH N K LK
Sbjct: 512  ------KSDQIIVDVRMAANKLFPLE-VSSIEKHALVVKETSESNLWHLRYGHLNVKGLK 564

Query: 833  KLKLETMEGPKIKVKDGNTYEGFLAVKLHKFPYLE-RKWRCSKKLQTIHSDICGPIQPMS 1009
             L  + M     K+   N  EG +  K  K P+ + R  R S  L+ IH+D+CGP+Q  S
Sbjct: 565  LLSKKEMVFELPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTAS 624

Query: 1010 FGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
            FGG  Y L FTDD S M+W + ++SK E +  F   +  ++ + G  I +LR
Sbjct: 625  FGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLR 676


>emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]
          Length = 1269

 Score =  136 bits (342), Expect = 2e-29
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 22/360 (6%)
 Frame = +2

Query: 152  CKICKIKGHKTWFCWFNP*GPKYDPNKLREFEH-------KKKRFQPRHEAHIANEEKDV 310
            C  CK   H    CW     P ++ N   +  H       KKK+ Q + E H +  E+D 
Sbjct: 237  CSHCKRTNHAEKDCWHKG-KPLFNCNFCNKLGHSEKYCRAKKKQSQHQPEQHASVTEED- 294

Query: 311  KNTEANLANIDEHNIFLMVMEEIKSK----WYIDSGCNRHMCNNMKLFHDYIHLQGNSVV 478
                    N DEH    M  + + S     W IDSGC  HM  ++ +F   I       V
Sbjct: 295  -------KNDDEH--LFMASQALSSHELNTWLIDSGCTSHMTKHLSIFTS-IDRSVQPKV 344

Query: 479  KIAGDQELQVKSYGNIVLPMNNNGIVLKNVLYVEGLRKNLVSXXXXXXXXXXXXAGV--- 649
            K+   + +Q K  G I +       ++ NVLY+  L +NL+S                  
Sbjct: 345  KLGNGEVVQAKGKGTIAISTKRGTKIVTNVLYIPDLDQNLLSVAQMLRNGYAVSFKENFC 404

Query: 650  ---DNHGKPICKIMKQNQVIAKGLEQNGIFVLNSINNAECHLTLA--EESDMWHKRFGHA 814
               D HG  I KI           + NG      ++  E H+  A  +ES +WHKR+GH 
Sbjct: 405  FISDVHGTKIAKI-----------KMNGNSFYLKLDLVEGHVFSAKIDESVVWHKRYGHF 453

Query: 815  NFKSLKKLKLETM--EGPKIKVKDGNTYEGFLAVKLHKFPYLER-KWRCSKKLQTIHSDI 985
            N KSL+ ++   M  + P+I V +  T E     K  + P+ +    R + KL+ IHSDI
Sbjct: 454  NLKSLRFMQEAGMVEDMPEISV-NAQTCESCELGKQQRQPFPQNMSKRATHKLELIHSDI 512

Query: 986  CGPIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
            CGP+   S     Y   F DDFS MTW + +K+K +V   F + +K ++ + G  + +LR
Sbjct: 513  CGPMSTTSLSNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQNVKVLR 572


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  136 bits (342), Expect = 2e-29
 Identities = 94/313 (30%), Positives = 156/313 (49%), Gaps = 11/313 (3%)
 Frame = +2

Query: 260  RFQPRHEAHIANEEKDVKNTEANLANIDEHNI--FLMVMEEIKSK---WYIDSGCNRHMC 424
            R + R +A     +K+ +  +AN    +E  +  F+   EE+ S    W++DSGC+ HM 
Sbjct: 243  RGRGRGDAQXECWKKERQEKQANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMT 302

Query: 425  NNMKLFHDYIHLQGNSVVKIAGDQELQVKSYGNIVLPMNNNGI-VLKNVLYVEGLRKNLV 601
                LF + +       VK+  D+++QV+  G   +   +  + +L NV ++  L +NL+
Sbjct: 303  GIKSLFKE-LDESHKLKVKLGDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLL 361

Query: 602  SXXXXXXXXXXXXAGVDNHGKPICKIMKQNQVIAK-GLEQNGIFVLNSINNAECHLTLAE 778
            S              + +    + K  K +Q+I    +  N +F L  +++ E H  + +
Sbjct: 362  SVGQLMVSGYSI---LFDGATCVIKDKKSDQIIVBVRMAANKLFPLE-VSSIEKHALVVK 417

Query: 779  E---SDMWHKRFGHANFKSLKKLKLETMEGPKIKVKDGNTYEGFLAVKLHKFPYLE-RKW 946
            E   S++WH R+GH N K LK L  + M     K+   N  EG +  K  K P+ + R  
Sbjct: 418  ETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSR 477

Query: 947  RCSKKLQTIHSDICGPIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKT 1126
            R S  L+ IH+D+CGP+Q  SFGG  Y L FTDD S M+W + ++SK E +  F   +  
Sbjct: 478  RASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAF 537

Query: 1127 LKIEIGNKIMILR 1165
            ++ + G  I +LR
Sbjct: 538  VEKQSGKCIKVLR 550


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  135 bits (341), Expect = 2e-29
 Identities = 99/351 (28%), Positives = 158/351 (45%), Gaps = 8/351 (2%)
 Frame = +2

Query: 137  KKSYHCKICKIKGHKTWFCWFNP*GPKYDPNKLREFEHKKKRFQPRHEAHIANEEKDVKN 316
            K +  C+ CK  GHK   CW      + D N  +  E + K F    +            
Sbjct: 255  KSNIQCRYCKKFGHKEVDCWTKQKDEQKDANFTQNVEEESKLFMASSQ------------ 302

Query: 317  TEANLANIDEHNIFLMVMEEIKSKWYIDSGCNRHMCNNMKLFHDYIHLQGNSVVKIAGDQ 496
                            + E   + W+IDSGC+ HM ++  LF D    Q  S V++  D+
Sbjct: 303  ----------------ITESANAVWFIDSGCSNHMSSSKSLFRDLDESQ-KSEVRLGDDK 345

Query: 497  ELQVKSYGNI-VLPMNNNGIVLKNVLYVEGLRKNLVSXXXXXXXXXXXXAGVDNHGKPIC 673
            ++ ++  G + +  +  N   L +V YV  L  NL+S               DN     C
Sbjct: 346  QVHIEGKGTVEIKTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVF-YDN----AC 400

Query: 674  KIM--KQNQVIAK-GLEQNGIFVLNSINNAECHLTLAE--ESDMWHKRFGHANFKSLKKL 838
             I   +  + IA+  + QN +F L+  N     L + E  E+++WH R+GH N   LK L
Sbjct: 401  DIKDKESGRTIARVPMTQNKMFPLDISNVGNSALVVKEKNETNLWHLRYGHLNVNWLKLL 460

Query: 839  KLETMEGPKIKVKDGNTYEGFLAVKLHK--FPYLERKWRCSKKLQTIHSDICGPIQPMSF 1012
              + M      +K+ +  EG +  K  +  FP + + WR +  L+ +H+D+CGP++  S 
Sbjct: 461  VQKDMVIGLPNIKELDLCEGCIYGKQTRKSFP-VGKSWRATTCLELVHADLCGPMKMESL 519

Query: 1013 GGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
            GG  Y L FTDD+S  +W + +K K E +  F   +  ++ + GNKI  LR
Sbjct: 520  GGSRYFLMFTDDYSRFSWVYFLKFKSETFETFKKFKAFVENQSGNKIKSLR 570


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  135 bits (339), Expect = 4e-29
 Identities = 97/311 (31%), Positives = 150/311 (48%), Gaps = 17/311 (5%)
 Frame = +2

Query: 284  HIANEEKDVKNTE----ANLAN--IDEHNIFLMVM-----EEIKSKWYIDSGCNRHMCNN 430
            H A+E K   N +    AN     I E ++ LM       ++   KWY+DSG + HMC  
Sbjct: 289  HYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGR 348

Query: 431  MKLFHDYIH-LQGNSVVKIAGDQELQVKSYGNIVLPMNNNGI-VLKNVLYVEGLRKNLVS 604
              +F +    ++GN  V +  + +++VK  GNI++ + N     + NV Y+  ++ N++S
Sbjct: 349  KSMFAELDESVRGN--VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILS 406

Query: 605  XXXXXXXXXXXXAGVDNHGKPICKIMKQNQVIAKGLEQNGIFVLNSINN-AEC-HLTLAE 778
                           +N      +  + N +    + +N +FVLN  N+ A+C  +   E
Sbjct: 407  LGQLLEKGYDIRLKDNNLS---IRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKE 463

Query: 779  ESDMWHKRFGHANFKSLKKL-KLETMEGPKIKVKDGNTYEGFLAVKLHKFPY-LERKWRC 952
            ES +WH RFGH NF  L+ L + E + G           EG L  K  K  +  E   R 
Sbjct: 464  ESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRA 523

Query: 953  SKKLQTIHSDICGPIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLK 1132
             K L+ IH+D+CGPI+P S G  +Y L F DDFS  TW + +K K EV+  F   +  ++
Sbjct: 524  QKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVE 583

Query: 1133 IEIGNKIMILR 1165
             E G  I  +R
Sbjct: 584  KESGLVIKTMR 594


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  134 bits (338), Expect = 5e-29
 Identities = 90/287 (31%), Positives = 141/287 (49%), Gaps = 11/287 (3%)
 Frame = +2

Query: 338  IDEHNIFLMVM-----EEIKSKWYIDSGCNRHMCNNMKLFHDYIH-LQGNSVVKIAGDQE 499
            I E ++ LM       ++   KWY+DSG + HMC    +F +    ++GN  V +  + +
Sbjct: 313  IQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGN--VALGDESK 370

Query: 500  LQVKSYGNIVLPMNNNGI-VLKNVLYVEGLRKNLVSXXXXXXXXXXXXAGVDNHGKPICK 676
            ++VK  GNI++ + N     + NV Y+  ++ N++S               +N      +
Sbjct: 371  MEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLS---IR 427

Query: 677  IMKQNQVIAKGLEQNGIFVLNSINN-AEC-HLTLAEESDMWHKRFGHANFKSLKKL-KLE 847
              + N +    + +N +FVLN  N+ A+C  +   EES +WH RFGH NF  L+ L + E
Sbjct: 428  DQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKE 487

Query: 848  TMEGPKIKVKDGNTYEGFLAVKLHKFPY-LERKWRCSKKLQTIHSDICGPIQPMSFGGKH 1024
             + G           EG L  K  K  +  E   R  K L+ IH+D+CGPI+P S G  +
Sbjct: 488  MVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSN 547

Query: 1025 YILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
            Y L F DDFS  TW + +K K EV+  F   +  ++ E G  I  +R
Sbjct: 548  YFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
            gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1334

 Score =  134 bits (337), Expect = 7e-29
 Identities = 84/300 (28%), Positives = 147/300 (49%), Gaps = 18/300 (6%)
 Frame = +2

Query: 320  EANLANIDEHNIFLMVMEEI----KSKWYIDSGCNRHMCNNMKLFHDYIHLQGNSVVKIA 487
            EAN   ++E  + +  +E+I    K  W++DSGC+ HMC   + F + +       V++ 
Sbjct: 270  EANYVEMEEDLLLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFLE-LDSGFKQNVRLG 328

Query: 488  GDQELQVKSYGNIVLPMNNNGIVLKNVLYVEGLRKNLVSXXXXXXXXXXXXAGVDNHGKP 667
             D+ + V+  G + L ++    V+ +V +V GL+ NL S               D     
Sbjct: 329  DDRRMAVEGKGKLRLEVDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGD----- 383

Query: 668  ICKIMKQNQ---VIAKGLEQNGIFVL-------NSINNAECHLTLAEESDMWHKRFGHAN 817
            +C++  + +   V+   + +N +FV+              C   + + ++MWHKRFGH N
Sbjct: 384  VCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLN 443

Query: 818  FKSLKKL-KLETMEG-PKIKVKDGNTYEGFL--AVKLHKFPYLERKWRCSKKLQTIHSDI 985
             + L+ L + E ++G PK  + +            ++ +    E  W+ ++ LQ +H+DI
Sbjct: 444  HQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDI 503

Query: 986  CGPIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
            CGPI P S  GK YIL F DDFS   WT+++  K E ++ F   +  ++ E G K++ LR
Sbjct: 504  CGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLR 563


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  134 bits (337), Expect = 7e-29
 Identities = 84/300 (28%), Positives = 147/300 (49%), Gaps = 18/300 (6%)
 Frame = +2

Query: 320  EANLANIDEHNIFLMVMEEI----KSKWYIDSGCNRHMCNNMKLFHDYIHLQGNSVVKIA 487
            EAN   ++E  + +  +E+I    K  W++DSGC+ HMC   + F + +       V++ 
Sbjct: 270  EANYVEMEEDLLLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFLE-LDSGFKQNVRLG 328

Query: 488  GDQELQVKSYGNIVLPMNNNGIVLKNVLYVEGLRKNLVSXXXXXXXXXXXXAGVDNHGKP 667
             D+ + V+  G + L ++    V+ +V +V GL+ NL S               D     
Sbjct: 329  DDRRMAVEGKGKLRLEVDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGD----- 383

Query: 668  ICKIMKQNQ---VIAKGLEQNGIFVL-------NSINNAECHLTLAEESDMWHKRFGHAN 817
            +C++  + +   V+   + +N +FV+              C   + + ++MWHKRFGH N
Sbjct: 384  VCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLN 443

Query: 818  FKSLKKL-KLETMEG-PKIKVKDGNTYEGFL--AVKLHKFPYLERKWRCSKKLQTIHSDI 985
             + L+ L + E ++G PK  + +            ++ +    E  W+ ++ LQ +H+DI
Sbjct: 444  HQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDI 503

Query: 986  CGPIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
            CGPI P S  GK YIL F DDFS   WT+++  K E ++ F   +  ++ E G K++ LR
Sbjct: 504  CGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLR 563


>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
          Length = 1207

 Score =  134 bits (337), Expect = 7e-29
 Identities = 84/300 (28%), Positives = 147/300 (49%), Gaps = 18/300 (6%)
 Frame = +2

Query: 320  EANLANIDEHNIFLMVMEEI----KSKWYIDSGCNRHMCNNMKLFHDYIHLQGNSVVKIA 487
            EAN   ++E  + +  +E+I    K  W++DSGC+ HMC   + F + +       V++ 
Sbjct: 175  EANYVEMEEDLLLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFLE-LDSGFKQNVRLG 233

Query: 488  GDQELQVKSYGNIVLPMNNNGIVLKNVLYVEGLRKNLVSXXXXXXXXXXXXAGVDNHGKP 667
             D+ + V+  G + L ++    V+ +V +V GL+ NL S               D     
Sbjct: 234  DDRRMAVEGKGKLRLEVDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGD----- 288

Query: 668  ICKIMKQNQ---VIAKGLEQNGIFVL-------NSINNAECHLTLAEESDMWHKRFGHAN 817
            +C++  + +   V+   + +N +FV+              C   + + ++MWHKRFGH N
Sbjct: 289  VCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLN 348

Query: 818  FKSLKKL-KLETMEG-PKIKVKDGNTYEGFL--AVKLHKFPYLERKWRCSKKLQTIHSDI 985
             + L+ L + E ++G PK  + +            ++ +    E  W+ ++ LQ +H+DI
Sbjct: 349  HQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDI 408

Query: 986  CGPIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
            CGPI P S  GK YIL F DDFS   WT+++  K E ++ F   +  ++ E G K++ LR
Sbjct: 409  CGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLR 468


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  134 bits (337), Expect = 7e-29
 Identities = 97/311 (31%), Positives = 149/311 (47%), Gaps = 17/311 (5%)
 Frame = +2

Query: 284  HIANEEKDVKNTE----ANLAN--IDEHNIFLMVM-----EEIKSKWYIDSGCNRHMCNN 430
            H A+E K   N +    AN     I E ++ LM       +E   KWY+DSG + HMC  
Sbjct: 289  HYASECKAPSNKKFKEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGR 348

Query: 431  MKLFHDYIH-LQGNSVVKIAGDQELQVKSYGNIVLPMNNNGI-VLKNVLYVEGLRKNLVS 604
              +F +    ++GN  V +  + +++VK  GNI++ + N     + NV Y+  ++ N++S
Sbjct: 349  KSMFAELDESVRGN--VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILS 406

Query: 605  XXXXXXXXXXXXAGVDNHGKPICKIMKQNQVIAKGLEQNGIFVLNSINN-AEC-HLTLAE 778
                           +N      +  + N +    + +N +FVLN  N+ A+C  +   E
Sbjct: 407  LGQLLEKGYDIRLKDNNLS---IRDKESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKE 463

Query: 779  ESDMWHKRFGHANFKSLKKL-KLETMEGPKIKVKDGNTYEGFLAVKLHKFPY-LERKWRC 952
            ES +WH RFGH NF  L+ L + E + G           EG L     K  +  E   R 
Sbjct: 464  ESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRA 523

Query: 953  SKKLQTIHSDICGPIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLK 1132
             K L+ IH+D+CGPI+P S G  +Y L F DDFS  TW + +K K EV+  F   +  ++
Sbjct: 524  QKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVE 583

Query: 1133 IEIGNKIMILR 1165
             E G  I  +R
Sbjct: 584  KESGLVIKTMR 594


>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
          Length = 1291

 Score =  131 bits (330), Expect = 5e-28
 Identities = 105/356 (29%), Positives = 154/356 (43%), Gaps = 22/356 (6%)
 Frame = +2

Query: 152  CKICKIKGHKTWFCWFNP*GPKYDPNKLREFEH-------KKKRFQPRHEAHIANEEKDV 310
            C  CK   H    CW     P ++ N   +  H       KKK+ Q + E H +  E+D 
Sbjct: 251  CSHCKRTNHAEKDCWHKG-KPLFNCNFCNKLGHSEKYCRAKKKQSQQQPEQHASVTEED- 308

Query: 311  KNTEANLANIDEHNIFLMVMEEIKSK----WYIDSGCNRHMCNNMKLFHDYIHLQGNSVV 478
                    N DEH    M  + + S     W IDSGC  HM  ++ +F   I       V
Sbjct: 309  -------KNDDEH--LFMASQALSSHELNTWLIDSGCTSHMTKHLSIFTS-IDRSVQPKV 358

Query: 479  KIAGDQELQVKSYGNIVLPMNNNGIVLKNVLYVEGLRKNLVSXXXXXXXXXXXXAGV--- 649
            K+   + +Q K  G I +       +  NVLY+  L +NL+S                  
Sbjct: 359  KLGNGEVVQAKGKGTIAISTKKGTKIXTNVLYIPDLDQNLLSVAQMLRNGYAISFKENFC 418

Query: 650  ---DNHGKPICKIMKQNQVIAKGLEQNGIFVLNSINNAECHLTLA--EESDMWHKRFGHA 814
               D HG  I KI           + NG      ++  E H+  A  +ES +WHKR+GH 
Sbjct: 419  FISDVHGTEIAKI-----------KMNGNSFYLKLDLVEGHVFSAKIDESVVWHKRYGHF 467

Query: 815  NFKSLKKLKLETM--EGPKIKVKDGNTYEGFLAVKLHKFPYLER-KWRCSKKLQTIHSDI 985
            N KSL+ ++   M  + P+I V +  T E     K  + P+ +    R + KL+ IHSDI
Sbjct: 468  NLKSLRFMQEAGMVEDMPEISV-NAQTCESCELGKQQRQPFPQNMSKRATHKLELIHSDI 526

Query: 986  CGPIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKI 1153
            CGP+   S     Y   F DDFS MTW + +K+K +V   F + +K ++ + G  +
Sbjct: 527  CGPMSTTSLSNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQNV 582


>ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898|gb|EDW75799.1| GK15001
            [Drosophila willistoni]
          Length = 1249

 Score =  130 bits (328), Expect = 8e-28
 Identities = 88/298 (29%), Positives = 147/298 (49%), Gaps = 5/298 (1%)
 Frame = +2

Query: 287  IANEEKDVKNTEANLANIDEHNIFLMVMEEIK-SKWYIDSGCNRHMCNNMKLFHDY-IHL 460
            +  +EK+ K TE  + N     I  +  E +K  KW +DSG   HMC +  +F D+ +H 
Sbjct: 235  VDKKEKEYKYTE-KMENKQCSLINALEAENMKREKWCLDSGATSHMCCDKSMFSDFSVH- 292

Query: 461  QGNSVVKIAGDQELQVKSYGNIVLPMNNNGIVLKNVLYVEGLRKNLVSXXXXXXXXXXXX 640
              +  + +A    L+ +  G + +      + + NVLYV GL  N +S            
Sbjct: 293  --DEKISLADAGYLRAEGKGKVTIRTGICKLTMNNVLYVPGLAGNFMSVARVIEYN---- 346

Query: 641  AGVDNHGKPICKIMKQNQVIAKGLEQNGIFVLNSINNAECHLTLAEESDMWHKRFGHANF 820
              V +  K + KI++  + I K  +   +FV  +  +      + E+  +WHKRFGH N+
Sbjct: 347  -SVVHFEKHMAKIIQNGECILKAKKIGNLFVFEA-ESENLFAAVGEDVSLWHKRFGHLNY 404

Query: 821  KSLKKLKLETM-EGPKIKVKDGNT-YEGFLAVKLHKFPYLER-KWRCSKKLQTIHSDICG 991
            KSL ++  + +  G  +     NT  +  +  K+H  P+ +  + R S+ LQ +HSD+CG
Sbjct: 405  KSLTQIASKGLVRGLSVTNFAPNTPCKTCMVSKIHVQPFPKMTESRSSELLQLVHSDVCG 464

Query: 992  PIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
            P    S GG  Y LTF DD S   + + +K KDEV+ KF+  +  ++ + G K+  +R
Sbjct: 465  PFGTKSLGGSRYFLTFIDDKSRRIFVYFLKGKDEVFGKFLEFKSLVERQTGKKLKCIR 522


>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score =  129 bits (325), Expect = 2e-27
 Identities = 81/268 (30%), Positives = 136/268 (50%), Gaps = 9/268 (3%)
 Frame = +2

Query: 389  WYIDSGCNRHMCNNMKLFHDYIHLQGNSVVKIAGDQELQVKSYGNIVLPMNNNGIVLKNV 568
            W++DSGC+ HMC     F D+     +SV K+  +  + V   GN+ L +N    ++  V
Sbjct: 320  WFLDSGCSNHMCGKKDYFSDFDGTFRDSV-KLGNNTSMSVLGKGNVRLKVNEMTQIITGV 378

Query: 569  LYVEGLRKNLVSXXXXXXXXXXXXAGVDNHGKPICKIMKQNQ--VIAKGLEQNGIFVLNS 742
             YV  L+ NL+S              +  HGK  CK+    +  ++   +  N +F+L +
Sbjct: 379  FYVPELKNNLLSIGQLQEKGLTI---LFQHGK--CKVFHSQKGLIMDTKMSSNRMFMLYA 433

Query: 743  IN---NAECHLTLAEES-DMWHKRFGHANFKSLKKLKLETMEG--PKIKVKDGNTYEGFL 904
            ++   ++ C  T+ E+   +WH R+GH +F+ LK L+   M    P+ +       +  L
Sbjct: 434  LSQPISSTCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQ-PPSKLCKDCL 492

Query: 905  AVKLHKFPYLERK-WRCSKKLQTIHSDICGPIQPMSFGGKHYILTFTDDFSMMTWTFVIK 1081
              K H+    ++  WR ++ LQ +H+DICGPI P+S   K Y+LTFTDDFS  TW + + 
Sbjct: 493  VGKQHRSSIPKKSNWRAAEILQLVHADICGPINPISNSKKRYLLTFTDDFSRKTWVYFLV 552

Query: 1082 SKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
             K E +  F + +  ++ E  + +  LR
Sbjct: 553  EKSEAFAVFKSFKTYVEKETSSFLRCLR 580


>gb|ACI62137.1| polyprotein [Drosophila melanogaster]
          Length = 1319

 Score =  129 bits (325), Expect = 2e-27
 Identities = 101/358 (28%), Positives = 165/358 (46%), Gaps = 7/358 (1%)
 Frame = +2

Query: 113  EEVNLMTTKKSYHCKICKIKGHKTWFCWFNP*GPKYDPNKLREFEHKKKRFQPRHEAHIA 292
            EE NL        C IC+  GH+   C          PNK R   HKK            
Sbjct: 215  EENNLEKHSFKGKCYICEKFGHRAREC----------PNKGR---HKK-----------L 250

Query: 293  NEEKDVKNTEANLANIDEHNIFLMVMEEIKSKWYIDSGCNRHMCNNMKLFHDYIHLQGNS 472
             E K+  N   +++   +           K+ W +DSG   HMC +  LF  +I+ + + 
Sbjct: 251  GESKEKSNCLMHISATTQR----------KNIWCVDSGATSHMCCDKGLFTSFINKETS- 299

Query: 473  VVKIAGDQELQVKSYGNIVLPMNNNGIVLKNVLYVEGLRKNLVSXXXXXXXXXXXXAGVD 652
             + +A D+ ++    G ++L   N  I L++V+YV  L  N +S              + 
Sbjct: 300  -IMLAADKFVKSSGIGTVMLKSQNVNIELRDVIYVPSLHMNFLSVSKSAEYE-----NIT 353

Query: 653  NHGKPICKIM-KQNQVIAKGLEQNGIFVLNSIN-NAECHLTLAEESDM--WHKRFGHANF 820
               K    I  KQ +V+ + ++++ +++  S + N   HL L + S M  WH RFGH NF
Sbjct: 354  TFDKKAAVIKNKQGEVMMRAMQEDNLYLFTSSSKNGAVHL-LNDSSRMATWHNRFGHLNF 412

Query: 821  KSLKKLK-LETMEGPKIKVKDGN-TYEGFLAVKLHKFPYLERKWRCSKK-LQTIHSDICG 991
            + LK++K  E + G   K    N   +     K+H  P+ +   R ++  L+ +HSD+CG
Sbjct: 413  QCLKEIKEKELVIGMDFKNMSVNINCDTCNMAKIHVLPFPQNSERATQSVLELVHSDVCG 472

Query: 992  PIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
            P+   S GG  Y +TF DD+S   + + + +K+EV+ KF   +  ++ + G KI  LR
Sbjct: 473  PMNVSSLGGNKYFVTFIDDYSRKIFIYFMHAKNEVFDKFKLFKSYVECQTGKKIKALR 530


>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
          Length = 1194

 Score =  129 bits (325), Expect = 2e-27
 Identities = 91/345 (26%), Positives = 149/345 (43%), Gaps = 7/345 (2%)
 Frame = +2

Query: 152  CKICKIKGHKTWFCWFNP*GPKYDPNKLREFEHKKKRFQPRHEAHIANEEKDVKNTEANL 331
            C  C  KGH    CW                   KK     + A   +E ++  + +A  
Sbjct: 260  CYNCGKKGHMAKDCW------------------SKKGLVESNAA--TSESEBEWDAQAFF 299

Query: 332  ANIDEHNIFLMVMEEI--KSKWYIDSGCNRHMCNNMKLFHDYIHLQGNSVVKIAGDQELQ 505
                E        E+I  +  W IDSGC+ HM  + +   D    +G  +V    + ++ 
Sbjct: 300  VAXGESXFIATTSEQIDYEKDWIIDSGCSNHMTGDKEKLXDLSEYKGRHMVVTXNNSKJP 359

Query: 506  VKSYGNIVLPM--NNNGIVLKNVLYVEGLRKNLVSXXXXXXXXXXXXAGV-DNHGKPICK 676
            +   GN V+    N N + L+NV +V G++KNL+S             G  D       +
Sbjct: 360  IAHIGNTVVSSQYNTNDVSLQNVYHVPGMKKNLLSVAQLTSSGHFVLFGPQDVKVYRDLE 419

Query: 677  IMKQNQVIAKGLEQNGIFVLNSINNAECHLTLAEESDMWHKRFGHANFKSLK-KLKLETM 853
            IM++  +    LE   ++V+++           E +D+ H R  H ++  L   +K   +
Sbjct: 420  IMEEPVIXRWRLES--VYVMSAETAXVDKTRKNETTDLXHMRLSHVSYSKLTVMMKKSML 477

Query: 854  EG-PKIKVKDGNTYEGFLAVKLHKFPYLERKWRCSKKLQTIHSDICGPIQPMSFGGKHYI 1030
            +G P+++V+      G    K H+ PY E KW+    L+ IHSD+ GP++  S  G  Y+
Sbjct: 478  KGLPQLEVRKDTICAGCXYGKAHQLPYEESKWKTKGPLELIHSDVFGPVKXASLSGMKYM 537

Query: 1031 LTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNKIMILR 1165
             TF DDFS   W   +K K E + KF   ++  + E+  +I  LR
Sbjct: 538  XTFIDDFSRYVWVHFMKEKSETFSKFKEFKEMTEAEVDKRIRCLR 582


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  129 bits (324), Expect = 2e-27
 Identities = 102/365 (27%), Positives = 164/365 (44%), Gaps = 20/365 (5%)
 Frame = +2

Query: 131  TTKKSYHCKICKIKGHKTWFCWFNP*GPKYDPNKLREFEHKKKRFQPRHEAHIANEEKDV 310
            T+  +  C IC+   H T  CW      K   NK +   H  K  + R E + AN  ++ 
Sbjct: 252  TSSSNLWCDICQKSSHTTDMCW-----KKMTCNKCKRKGHIAKYCRTR-EINRANFSQEK 305

Query: 311  KNTEANLANIDEHNIFLMVMEEIKSKWYIDSGCNRHMCNNMKLF-------HDYIHLQGN 469
            + +E  + +           EE    W IDSGC  HM  +  LF       H  IH+   
Sbjct: 306  EKSEEMVFSCHT------AQEEKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHMGNG 359

Query: 470  SVVKIAGDQELQVKSYGNIVLPMNNNGIVLKNVLYVEGLRKNLVSXXXXXXXXXXXXAGV 649
            S+ +  G         G + +   +    +K+VL V  L++NL+S               
Sbjct: 360  SIAQSEGK--------GTVAVQTADGPKFIKDVLLVPDLKQNLLSIGQLL---------- 401

Query: 650  DNHGKPI------CKIM--KQNQVIAK-GLEQNGIFVLNSINNAECHL-TLAEESDMWHK 799
              HG  +      CKI+  K N+++AK  +E+N  F+L   +  +  L +  + SD+WHK
Sbjct: 402  -EHGYAVYFEDFSCKILDRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSEVDISDLWHK 460

Query: 800  RFGHANFKSLKKLKLETM-EGPKIKVKDGNTYEGFLAVKLHK--FPYLERKWRCSKKLQT 970
            R GH N+++LK L+ + M +G        +  EG +  K  +  FP+    WR S  L+ 
Sbjct: 461  RMGHLNYRALKLLRTKGMVQGLPFITLKSDPCEGCVFGKQIRASFPH-SGAWRASAPLEL 519

Query: 971  IHSDICGPIQPMSFGGKHYILTFTDDFSMMTWTFVIKSKDEVYRKFMNLRKTLKIEIGNK 1150
            +H+DI G +  +S GG  Y +TF DD++ M W + +K K      F   +  ++ +   K
Sbjct: 520  VHADIVGKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRK 579

Query: 1151 IMILR 1165
            I +LR
Sbjct: 580  IKVLR 584