BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00014251
         (971 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]    159   1e-36

>emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]
          Length = 924

 Score =  159 bits (403), Expect = 1e-36
 Identities = 91/204 (44%), Positives = 119/204 (58%), Gaps = 6/204 (2%)
 Frame = +2

Query: 377  QNILDSLTSEGVSPYVGLSRSNQPILQQQVEN--WPYMSQDQQMSGNWFPSKRASNNQVP 550
            Q I++SLTSE  S Y+ LSR +QP +QQ  EN  WP +SQDQQ    WF SKR SNN V 
Sbjct: 599  QTIIESLTSEVGSHYLNLSRPSQPAVQQSAENLVWPCISQDQQAPAAWFSSKRVSNNPV- 657

Query: 551  YFPPNQVEGAISGGGHCFISQTDPKSGTGVQTQPLSMAQFQLRDCPXXXXXXXXXXXXNI 730
                   E  +       +SQT+P + + +  Q + + QF LR+C             N+
Sbjct: 658  -------EAPLPSASQRVLSQTEPLAQSNIPVQSMPLTQFALRNCSSDQEGVQSDSQSNL 710

Query: 731  LFGVNIDNSSLSIPETGSNPKSVNNGAYGASSYAITDLINVTTCAPVSGISMTSNT---- 898
            LFGVNID  SL I +T SN +++ NGAY  SS+++TDL+NV +CAP SG  M S+     
Sbjct: 711  LFGVNIDTPSLVITDTVSNSRNIGNGAYVGSSFSVTDLLNVPSCAPTSGFPMNSSIGASG 770

Query: 899  GVDESGFSQGSANITKINGGPTRT 970
            G+DE+G SQ  AN   IN  PTRT
Sbjct: 771  GLDENGLSQHGANYAHIN-PPTRT 793