BLASTX nr result

ID: Ephedra28_contig00014215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00014215
         (354 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_022169635.1| chromosome partition protein Smc [Eubacteriu...    55   7e-06
ref|WP_005343545.1| hypothetical protein [Eubacterium hallii] gi...    55   7e-06

>ref|WP_022169635.1| chromosome partition protein Smc [Eubacterium hallii CAG:12]
            gi|524364031|emb|CDB19192.1| chromosome partition protein
            Smc [Eubacterium hallii CAG:12]
          Length = 1187

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
 Frame = +2

Query: 11   DMKHQISILVAEKELADEEMRSLKNELHKQVPLVNEERAHRERMIKETD----------V 160
            D+ +QI  + A+KE   E + SLK E       ++E R+ +E ++KE +           
Sbjct: 730  DLSNQIPDMDAKKEELSERITSLKEEHQILKEQIDEIRSQKEALLKEQEDNEQIHEQNNT 789

Query: 161  VLYGLRQDLSSTKAALQKNKAELTNLQDSLSELSQIRKELENRNDCLQKDLENNKRALQE 340
            VL  L++ LS  +A + K ++E    + SLS++ Q    L +    ++K++EN K +L+E
Sbjct: 790  VLDSLKEQLSEIRAEVSKLESEKNEQRISLSKMRQELDYLRSNKQRIEKEIENIKNSLEE 849

Query: 341  N 343
            N
Sbjct: 850  N 850


>ref|WP_005343545.1| hypothetical protein [Eubacterium hallii] gi|224956694|gb|EEG37903.1|
            chromosome segregation protein SMC [Eubacterium hallii
            DSM 3353]
          Length = 1187

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
 Frame = +2

Query: 11   DMKHQISILVAEKELADEEMRSLKNELHKQVPLVNEERAHRERMIKETD----------V 160
            D+ +QI  + A+KE   E + SLK E       ++E R+ +E ++KE +           
Sbjct: 730  DLSNQIPDMDAKKEELSERITSLKEEHQILKEQIDEIRSQKEALLKEQEDNEQIHEQNNT 789

Query: 161  VLYGLRQDLSSTKAALQKNKAELTNLQDSLSELSQIRKELENRNDCLQKDLENNKRALQE 340
            VL  L++ LS  +A + K ++E    + SLS++ Q    L +    ++K++EN K +L+E
Sbjct: 790  VLDSLKEQLSEIRAEVSKLESEKNEQRISLSKMRQELDYLRSNKQRIEKEIENIKNSLEE 849

Query: 341  N 343
            N
Sbjct: 850  N 850


Top