BLASTX nr result

ID: Ephedra28_contig00013964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00013964
         (899 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349884.1| PREDICTED: clathrin interactor EPSIN 3-like ...    61   5e-07
ref|XP_004252964.1| PREDICTED: clathrin interactor EPSIN 2-like ...    61   6e-07
ref|XP_004247982.1| PREDICTED: clathrin interactor EPSIN 3-like ...    59   2e-06
ref|XP_006364669.1| PREDICTED: clathrin interactor EPSIN 2-like ...    58   4e-06

>ref|XP_006349884.1| PREDICTED: clathrin interactor EPSIN 3-like [Solanum tuberosum]
          Length = 937

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 29/48 (60%), Positives = 39/48 (81%)
 Frame = -1

Query: 899 IAKTQPAKEKFQPKSSIWADTLSRGLIDLDLSESKATASLVDIGIVLD 756
           +A TQPAK+KF+ KS++WADTLSRGL++L++S SK T  L DIG+  D
Sbjct: 743 VANTQPAKDKFETKSTVWADTLSRGLVNLNISGSK-TNPLADIGVDFD 789


>ref|XP_004252964.1| PREDICTED: clathrin interactor EPSIN 2-like [Solanum lycopersicum]
          Length = 929

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 54/175 (30%), Positives = 69/175 (39%), Gaps = 14/175 (8%)
 Frame = -1

Query: 899  IAKTQPAKEKFQPKSSIWADTLSRGLIDLDLSESKATASLVDIGIVLD----PSAXXXXX 732
            +A TQPAK+KF+ KS++WADTLSRGL++L++S +K T  L DIG+  D            
Sbjct: 743  VANTQPAKDKFETKSTVWADTLSRGLVNLNISGTK-TNPLADIGVDFDAINRKEKRMEKP 801

Query: 731  XXXXXXXVATRGKAMXXXXXXXXXXXXXXSFNASTFGSFESSMGSSTFGMGPTAEKVNXX 552
                       GKAM                 A    +  + M  S  GMG     +   
Sbjct: 802  STAPVISTINMGKAMGSGTGVGRA-------GAGALRAPPNPMVGSGMGMGMGGMGMAGG 854

Query: 551  XXXXXXXXXXXSPTIGMNSER---NIGMKTATGSSFPMNYTMG-------PSQGG 417
                        P  GM   R   N+GM   TG  F M    G       P QGG
Sbjct: 855  GPGMGAYGGGNQPYRGMGMNRPMNNMGMGMNTGQGFQMQQPSGFPPGPGAPMQGG 909


>ref|XP_004247982.1| PREDICTED: clathrin interactor EPSIN 3-like [Solanum lycopersicum]
          Length = 855

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 28/48 (58%), Positives = 39/48 (81%)
 Frame = -1

Query: 899 IAKTQPAKEKFQPKSSIWADTLSRGLIDLDLSESKATASLVDIGIVLD 756
           I+ +QPAK+KF+ KS++WADTLSRGL++L++S SK T  L DIG+  D
Sbjct: 689 ISSSQPAKDKFETKSTVWADTLSRGLVNLNISGSK-TNPLADIGVDFD 735


>ref|XP_006364669.1| PREDICTED: clathrin interactor EPSIN 2-like [Solanum tuberosum]
          Length = 886

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 53/174 (30%), Positives = 70/174 (40%), Gaps = 8/174 (4%)
 Frame = -1

Query: 887  QPAKEKFQPKSSIWADTLSRGLIDLDLSESKATASLVDIGIVLD----PSAXXXXXXXXX 720
            QPAK+KF+ KS++WADTLSRGL++L++S SK T  L DIG+  D                
Sbjct: 719  QPAKDKFETKSTVWADTLSRGLVNLNISGSK-TNPLADIGVDFDAINRKEKRMEKPSITP 777

Query: 719  XXXVATRGKAMXXXXXXXXXXXXXXSFNASTFGSFESSMGSSTFGMGPTAEKVNXXXXXX 540
                 T GKAM                 A       + M     GMG  A  V       
Sbjct: 778  VTSTVTMGKAMGSGSGIGRA-------GAGALRPLSNPMAGVGMGMGVGAPGVYGVSQPM 830

Query: 539  XXXXXXXSP---TIGMNSERNIGMKTATGSS-FPMNYTMGPSQGGLDNNTQQFG 390
                    P   ++ MN  + + M+ +TG S  P  Y   P  G  +   Q FG
Sbjct: 831  GMGMARPMPMGMSMNMNMGQGVQMQQSTGGSIMPGGY--NPMMGTGNYGQQSFG 882


Top