BLASTX nr result
ID: Ephedra28_contig00013830
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00013830
(701 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001785468.1| predicted protein [Physcomitrella patens] gi... 320 4e-85
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [... 318 1e-84
emb|CBI39422.3| unnamed protein product [Vitis vinifera] 318 1e-84
ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 316 5e-84
ref|XP_003601731.1| DNA topoisomerase [Medicago truncatula] gi|3... 311 2e-82
gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao] 309 5e-82
gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus pe... 309 6e-82
ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 306 5e-81
gb|ESW35784.1| hypothetical protein PHAVU_001G264300g [Phaseolus... 303 5e-80
ref|XP_006410336.1| hypothetical protein EUTSA_v10016222mg [Eutr... 303 5e-80
ref|XP_002321105.1| DNA topoisomerase family protein [Populus tr... 300 3e-79
ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis t... 300 4e-79
ref|NP_001031463.1| DNA topoisomerase, type IA, core [Arabidopsi... 300 4e-79
ref|XP_006293663.1| hypothetical protein CARUB_v10022619mg [Caps... 298 9e-79
ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsi... 298 1e-78
ref|XP_004502266.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 296 3e-78
ref|XP_004502265.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 296 3e-78
ref|XP_002966408.1| hypothetical protein SELMODRAFT_168492 [Sela... 296 3e-78
ref|XP_002978156.1| hypothetical protein SELMODRAFT_233065 [Sela... 296 3e-78
dbj|BAD95240.1| putative DNA topoisomerase III beta [Arabidopsis... 296 4e-78
>ref|XP_001785468.1| predicted protein [Physcomitrella patens]
gi|162662910|gb|EDQ49709.1| predicted protein
[Physcomitrella patens]
Length = 869
Score = 320 bits (819), Expect = 4e-85
Identities = 147/232 (63%), Positives = 191/232 (82%)
Frame = +3
Query: 3 INKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLL 182
++K G+QL L+WDR ++FD++VA++FQ+LV+++ S V ++ +KE+RK RP GLNTV++L
Sbjct: 242 LSKGGHQLMLEWDRNRLFDREVAMLFQKLVLDAKSVRVADVVKKEDRKTRPHGLNTVDML 301
Query: 183 KVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYV 362
KVASSAL MGPHH MQIAERLYTQGY+SYPRTESTAYP++++ L + HP WGDY
Sbjct: 302 KVASSALNMGPHHTMQIAERLYTQGYLSYPRTESTAYPASYDIREALSIHRNHPIWGDYA 361
Query: 363 SSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKY 542
SSL++ G HP K+G DVGDHPPITP RSATESELGGGD+W+LYEY+T+HF+ +VSPDCKY
Sbjct: 362 SSLMSLGPHPPKSGVDVGDHPPITPTRSATESELGGGDSWRLYEYVTRHFLGSVSPDCKY 421
Query: 543 MRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLS 698
R +I F+AGGEKF GRTV S G+TA+MPWLAV++E+LP S GE I ++
Sbjct: 422 TRTKITFTAGGEKFFASGRTVTSAGFTAVMPWLAVSDESLPLISAGELIPMT 473
>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
Length = 894
Score = 318 bits (815), Expect = 1e-84
Identities = 150/229 (65%), Positives = 182/229 (79%)
Frame = +3
Query: 15 GYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVAS 194
GY+L L+W+R K+FD DVA+MFQ LV+ G V ++ EK+E K RP+GLNTVNLLKVAS
Sbjct: 274 GYELQLEWERNKLFDLDVAVMFQNLVMEDGIVEVTDISEKQESKSRPSGLNTVNLLKVAS 333
Query: 195 SALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLL 374
SALG GP AMQ+AERLYTQG++SYPRTESTAYPS+F+F+S L MQ +P WGDYV LL
Sbjct: 334 SALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKSTLGMQTNNPTWGDYVQKLL 393
Query: 375 AKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKR 554
GFH ++G D GDHPPITPMR+A E L G DAWKLY+Y+ +HFI TVSPDCKY+R +
Sbjct: 394 DDGFHRPRSGTDAGDHPPITPMRAANEDML-GNDAWKLYQYVCQHFIGTVSPDCKYVRNK 452
Query: 555 IEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
+EFS GGE F IG+ VI G+T+IMPWLAVNE+NLP F KGE I++SK
Sbjct: 453 VEFSIGGEIFRCIGQHVIVKGFTSIMPWLAVNEKNLPQFKKGEKIEVSK 501
>emb|CBI39422.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 318 bits (815), Expect = 1e-84
Identities = 150/229 (65%), Positives = 182/229 (79%)
Frame = +3
Query: 15 GYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVAS 194
GY+L L+W+R K+FD DVA+MFQ LV+ G V ++ EK+E K RP+GLNTVNLLKVAS
Sbjct: 290 GYELQLEWERNKLFDLDVAVMFQNLVMEDGIVEVTDISEKQESKSRPSGLNTVNLLKVAS 349
Query: 195 SALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLL 374
SALG GP AMQ+AERLYTQG++SYPRTESTAYPS+F+F+S L MQ +P WGDYV LL
Sbjct: 350 SALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKSTLGMQTNNPTWGDYVQKLL 409
Query: 375 AKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKR 554
GFH ++G D GDHPPITPMR+A E L G DAWKLY+Y+ +HFI TVSPDCKY+R +
Sbjct: 410 DDGFHRPRSGTDAGDHPPITPMRAANEDML-GNDAWKLYQYVCQHFIGTVSPDCKYVRNK 468
Query: 555 IEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
+EFS GGE F IG+ VI G+T+IMPWLAVNE+NLP F KGE I++SK
Sbjct: 469 VEFSIGGEIFRCIGQHVIVKGFTSIMPWLAVNEKNLPQFKKGEKIEVSK 517
>ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Fragaria vesca subsp.
vesca]
Length = 862
Score = 316 bits (809), Expect = 5e-84
Identities = 145/229 (63%), Positives = 184/229 (80%)
Frame = +3
Query: 15 GYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVAS 194
GY+L L W+R K+FD DVA+MFQ+LV++ G V + EK+E KGRP+GLNTVNLLKVAS
Sbjct: 245 GYELQLDWERNKLFDVDVAVMFQKLVMDDGIAEVTEISEKQESKGRPSGLNTVNLLKVAS 304
Query: 195 SALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLL 374
SALG GP AMQ+AERLYTQG++SYPRTESTAYPS+F+F+ L Q +P WG YV LL
Sbjct: 305 SALGFGPQMAMQVAERLYTQGFISYPRTESTAYPSSFDFKGTLGAQVNNPVWGSYVQRLL 364
Query: 375 AKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKR 554
+ G+ ++G DVGDHPP+TP+RSATE L G DAW+LYEY+ KHFI TVSPDCKY+R +
Sbjct: 365 SDGYQKPRSGTDVGDHPPVTPLRSATEDML-GNDAWRLYEYVCKHFIGTVSPDCKYVRTK 423
Query: 555 IEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
+EFS GGE FH +G+ V+ G+T+IMPWLAVNE+NLP F+KGE I++++
Sbjct: 424 VEFSIGGEIFHCVGQRVLVKGFTSIMPWLAVNEKNLPQFTKGEKIEVAR 472
>ref|XP_003601731.1| DNA topoisomerase [Medicago truncatula] gi|355490779|gb|AES71982.1|
DNA topoisomerase [Medicago truncatula]
Length = 1024
Score = 311 bits (796), Expect = 2e-82
Identities = 145/229 (63%), Positives = 183/229 (79%)
Frame = +3
Query: 15 GYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVAS 194
GY++ L+W R+K+FD +VA+MFQ+LV + G V N+ EK E KGRP GLNTVNLLKVAS
Sbjct: 395 GYEILLEWQRSKLFDINVAMMFQKLVADDGIVEVTNISEKPETKGRPVGLNTVNLLKVAS 454
Query: 195 SALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLL 374
SALG GP AMQ+AERLYTQG++SYPRTESTAYP +F+F S L Q +P WG+YV LL
Sbjct: 455 SALGFGPQMAMQLAERLYTQGFISYPRTESTAYPPSFDFRSALSAQRNNPTWGNYVEGLL 514
Query: 375 AKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKR 554
A G+ ++G DVGDHPPITPM+SA+E L G DAWKLY+YI ++FI TVSPDCKY+RK+
Sbjct: 515 ASGYQKPRSGTDVGDHPPITPMKSASEDML-GNDAWKLYQYICQYFIGTVSPDCKYIRKK 573
Query: 555 IEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
+EF GGE FH G+ VI+ G+TAIMPWLA+N+++LPSF +G+ I+LSK
Sbjct: 574 VEFQVGGESFHCTGQHVITKGFTAIMPWLAINDKSLPSFEEGQKIKLSK 622
>gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao]
Length = 868
Score = 309 bits (792), Expect = 5e-82
Identities = 145/229 (63%), Positives = 180/229 (78%)
Frame = +3
Query: 15 GYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVAS 194
GY L L+W R K+FD DVAIMFQ+LV G V ++ EK+E KGRP+GLNTVNLLKVAS
Sbjct: 247 GYDLQLEWKRQKLFDIDVAIMFQKLVTEDGILEVIDVSEKQESKGRPSGLNTVNLLKVAS 306
Query: 195 SALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLL 374
SALG GP AMQ+AERLYTQG++SYPRTESTAYP++F+F+ L + + WGDYV LL
Sbjct: 307 SALGFGPQTAMQLAERLYTQGFISYPRTESTAYPASFDFKGTLNVIANNSLWGDYVQRLL 366
Query: 375 AKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKR 554
A+G+H ++G D GDHPPITPM SATE L G DAW LY+Y+ +HFI TVSPDCKY+R++
Sbjct: 367 AEGYHKPRSGTDAGDHPPITPMHSATEDIL-GKDAWSLYQYVCQHFIGTVSPDCKYVRRK 425
Query: 555 IEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
+EF GGE FH IG+ V + G+T IMPWLA+NE+NLP F+KGE I++SK
Sbjct: 426 VEFLVGGEYFHCIGQHVTAQGFTYIMPWLAINEKNLPQFTKGEKIEVSK 474
>gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus persica]
Length = 866
Score = 309 bits (791), Expect = 6e-82
Identities = 144/229 (62%), Positives = 179/229 (78%)
Frame = +3
Query: 15 GYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVAS 194
GY+L L+W+R K+FD DVA+MFQ+LV+ G V + EK+E K RP+GLNTVNLLKVAS
Sbjct: 245 GYELQLEWERNKLFDYDVAVMFQKLVMEDGILEVTEIVEKQESKSRPSGLNTVNLLKVAS 304
Query: 195 SALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLL 374
SALG GP AMQ+AERLYTQG++SYPRTESTAYPS+F+F L Q +P WG YV LL
Sbjct: 305 SALGFGPQMAMQVAERLYTQGFISYPRTESTAYPSSFDFRGTLGAQVNNPTWGSYVQRLL 364
Query: 375 AKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKR 554
A G+ ++G DVGDHPP+TP+RSATE L G DAW+LYEYI HF+ TVSPDCKY+R +
Sbjct: 365 ADGYQKPRSGTDVGDHPPVTPLRSATEDML-GNDAWRLYEYICTHFMGTVSPDCKYVRTK 423
Query: 555 IEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
+EFS GGE FH +G V+ G+T+IMPWLAV E+NLP F+KGE I++S+
Sbjct: 424 VEFSIGGEFFHCVGHRVLVKGFTSIMPWLAVTEKNLPQFTKGEKIEVSQ 472
>ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
Length = 863
Score = 306 bits (783), Expect = 5e-81
Identities = 142/229 (62%), Positives = 177/229 (77%)
Frame = +3
Query: 15 GYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVAS 194
GY++ L+W R K+FD +VA+MFQ+LV G V + EK+E K RP GLNTVNLLKVAS
Sbjct: 244 GYEIQLEWQRGKLFDINVAMMFQKLVSEDGLLEVTEISEKQETKSRPVGLNTVNLLKVAS 303
Query: 195 SALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLL 374
SALG GP AMQ+AERLYTQG++SYPRTESTAYP +F+F L Q +P WG+YV LL
Sbjct: 304 SALGFGPQMAMQLAERLYTQGFISYPRTESTAYPPSFDFRGVLSAQTNNPTWGNYVQGLL 363
Query: 375 AKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKR 554
G+ + G DVGDHPPITPMRSA E L G DAWKLY+YI +HFI TVSPDCKY+R++
Sbjct: 364 TNGYQKPRLGTDVGDHPPITPMRSAAEDML-GNDAWKLYQYICQHFIGTVSPDCKYIRRK 422
Query: 555 IEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
+EFS GGE FH G+ V++ G+TAIMPWLA+N++N+PSF KG+ I++SK
Sbjct: 423 VEFSIGGESFHCTGQHVVTKGFTAIMPWLAINDKNIPSFIKGQKIEVSK 471
>gb|ESW35784.1| hypothetical protein PHAVU_001G264300g [Phaseolus vulgaris]
Length = 862
Score = 303 bits (775), Expect = 5e-80
Identities = 142/229 (62%), Positives = 177/229 (77%)
Frame = +3
Query: 15 GYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVAS 194
GY++ L+W R K+FD +VA+MFQ+LV G V + EK+E K RP GLNTVNLLKVAS
Sbjct: 244 GYEIQLEWQRGKLFDINVAMMFQKLVSEDGLLEVTEISEKQETKSRPVGLNTVNLLKVAS 303
Query: 195 SALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLL 374
SALG GP AMQ+AERLYTQG++SYPRTESTAYP +F+F L Q +P WG+YV LL
Sbjct: 304 SALGFGPQMAMQLAERLYTQGFISYPRTESTAYPPSFDFLGVLSAQKNNPTWGNYVQGLL 363
Query: 375 AKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKR 554
G+ + G DVGDHPPITPMRSA E L G DAWKLY+YI +HFI TVSPDCKY+R++
Sbjct: 364 TAGYQKPRLGTDVGDHPPITPMRSAAEDML-GNDAWKLYQYICQHFIGTVSPDCKYIRRK 422
Query: 555 IEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
+EFS GGE FH G+ V++ G+TAIMPWLA+N++N+PSF KG+ I++SK
Sbjct: 423 VEFSIGGESFHCTGQHVVTKGFTAIMPWLALNDKNIPSFVKGQKIEVSK 471
>ref|XP_006410336.1| hypothetical protein EUTSA_v10016222mg [Eutrema salsugineum]
gi|557111505|gb|ESQ51789.1| hypothetical protein
EUTSA_v10016222mg [Eutrema salsugineum]
Length = 879
Score = 303 bits (775), Expect = 5e-80
Identities = 141/229 (61%), Positives = 179/229 (78%)
Frame = +3
Query: 9 KIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKV 188
K GY+L L+WDR ++FD + AI+FQ+LV+ + V ++ EK+E KGRPAGLNTVNLLKV
Sbjct: 259 KDGYELQLEWDRRRLFDLEAAIVFQKLVVEGRTAKVIDVSEKQEVKGRPAGLNTVNLLKV 318
Query: 189 ASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSS 368
ASSALG GP AM +AERLYTQG++SYPRTESTAYPS+F+F LR Q +P WG +V
Sbjct: 319 ASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGFVQR 378
Query: 369 LLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMR 548
LL+ GFH K+G D GDHPPITPMR+ATE+ + GGDAW+LY+Y+ +HFI TVSP+CKYMR
Sbjct: 379 LLSDGFHKPKSGTDAGDHPPITPMRAATEA-MVGGDAWRLYQYVCQHFIGTVSPNCKYMR 437
Query: 549 KRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQL 695
++E S GGE FH G+ V G+TAIMPW AV+E+ LPSF +GE I++
Sbjct: 438 TKVEMSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFIRGEKIEV 486
>ref|XP_002321105.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222861878|gb|EEE99420.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 837
Score = 300 bits (768), Expect = 3e-79
Identities = 140/229 (61%), Positives = 177/229 (77%)
Frame = +3
Query: 15 GYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVAS 194
GY+L L+W+R K+FD DVA+MFQ+LV+ V ++ EK+E KGRP GLNTVNLLK+AS
Sbjct: 219 GYELQLEWERHKLFDLDVALMFQKLVLQDRILEVTDMSEKQESKGRPPGLNTVNLLKIAS 278
Query: 195 SALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLL 374
SALG GP MQ+AERLY QG++SYPRTESTAYPS+F+F+ L +P WGDYV LL
Sbjct: 279 SALGFGPQVTMQLAERLYIQGFISYPRTESTAYPSSFDFKGTLGALANNPMWGDYVQGLL 338
Query: 375 AKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKR 554
+ G+H ++G D GDHPPITPMRSA E L G DAW+LY+Y+ +HF+ TVSPDCKY R +
Sbjct: 339 SGGYHKPQSGKDAGDHPPITPMRSANEDML-GRDAWRLYQYVCQHFLGTVSPDCKYTRTK 397
Query: 555 IEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
+EFS GGE FH IG V G+T+IMPWLAV+E+NLP F+KG+ I++SK
Sbjct: 398 VEFSIGGEFFHCIGLHVTVKGFTSIMPWLAVSEKNLPQFAKGDKIEVSK 446
>ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
gi|330253525|gb|AEC08619.1| DNA topoisomerase, type IA,
core [Arabidopsis thaliana]
Length = 865
Score = 300 bits (767), Expect = 4e-79
Identities = 140/231 (60%), Positives = 178/231 (77%)
Frame = +3
Query: 3 INKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLL 182
I K GY+L L+W+R ++FD + A +FQ+LV+ + V ++ EK+E KGRPAGLNTVNLL
Sbjct: 243 IRKDGYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVNLL 302
Query: 183 KVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYV 362
KVASSALG GP AM +AERLYTQG++SYPRTESTAYPS+F+F LR Q +P WG YV
Sbjct: 303 KVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYV 362
Query: 363 SSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKY 542
LL+ GFH K+G D GDHPPITPMR+ATE + GGDAW+LY+Y+ +HF+ TVSP+CKY
Sbjct: 363 QRLLSDGFHMPKSGTDAGDHPPITPMRAATE-VMVGGDAWRLYQYVCQHFLGTVSPNCKY 421
Query: 543 MRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQL 695
+R ++E S GGE FH G+ V G+TAIMPW AV+E+ LPSF KGE I++
Sbjct: 422 IRTKVELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEV 472
>ref|NP_001031463.1| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
gi|51969720|dbj|BAD43552.1| putative DNA topoisomerase
III beta [Arabidopsis thaliana]
gi|51969988|dbj|BAD43686.1| putative DNA topoisomerase
III beta [Arabidopsis thaliana]
gi|330253526|gb|AEC08620.1| DNA topoisomerase, type IA,
core [Arabidopsis thaliana]
Length = 838
Score = 300 bits (767), Expect = 4e-79
Identities = 140/231 (60%), Positives = 178/231 (77%)
Frame = +3
Query: 3 INKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLL 182
I K GY+L L+W+R ++FD + A +FQ+LV+ + V ++ EK+E KGRPAGLNTVNLL
Sbjct: 216 IRKDGYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVNLL 275
Query: 183 KVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYV 362
KVASSALG GP AM +AERLYTQG++SYPRTESTAYPS+F+F LR Q +P WG YV
Sbjct: 276 KVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYV 335
Query: 363 SSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKY 542
LL+ GFH K+G D GDHPPITPMR+ATE + GGDAW+LY+Y+ +HF+ TVSP+CKY
Sbjct: 336 QRLLSDGFHMPKSGTDAGDHPPITPMRAATE-VMVGGDAWRLYQYVCQHFLGTVSPNCKY 394
Query: 543 MRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQL 695
+R ++E S GGE FH G+ V G+TAIMPW AV+E+ LPSF KGE I++
Sbjct: 395 IRTKVELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEV 445
>ref|XP_006293663.1| hypothetical protein CARUB_v10022619mg [Capsella rubella]
gi|482562371|gb|EOA26561.1| hypothetical protein
CARUB_v10022619mg [Capsella rubella]
Length = 864
Score = 298 bits (764), Expect = 9e-79
Identities = 140/231 (60%), Positives = 178/231 (77%)
Frame = +3
Query: 3 INKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLL 182
I K GY+L L+W+R ++FD + A +FQ+LV+ + V ++ EK+E KGRPAGLNTVNLL
Sbjct: 243 IAKDGYELQLEWERRRLFDMEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVNLL 302
Query: 183 KVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYV 362
KVASSALG GP AM +AERLYTQG++SYPRTESTAYPS+F+F LR Q +P WG YV
Sbjct: 303 KVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYV 362
Query: 363 SSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKY 542
LL+ GFH K+G D GDHPPITPMR+ATE ++ GGDAW+LY+Y+ +HFI TVS +CKY
Sbjct: 363 QRLLSDGFHKPKSGTDAGDHPPITPMRAATE-DMVGGDAWRLYQYVCQHFIGTVSHNCKY 421
Query: 543 MRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQL 695
+R ++E S GGE FH G+ V G+TAIMPW AV+E+ LPSF KGE I++
Sbjct: 422 IRTKVELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEV 472
>ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297327049|gb|EFH57469.1| DNA topoisomerase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 298 bits (762), Expect = 1e-78
Identities = 140/231 (60%), Positives = 178/231 (77%)
Frame = +3
Query: 3 INKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLL 182
I K GY+L L+W+R ++FD + A +FQ+LV+ + V ++ EK+E KGRPAGLNTV+LL
Sbjct: 243 IIKDGYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVSLL 302
Query: 183 KVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYV 362
KVASSALG GP AM +AERLYTQG++SYPRTESTAYPS+F+F LR Q +P WG YV
Sbjct: 303 KVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYV 362
Query: 363 SSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKY 542
LL+ GFH K+G D GDHPPITPMR+ATE + GGDAW+LY+Y+ +HFI TVSP+CKY
Sbjct: 363 QRLLSDGFHKPKSGTDAGDHPPITPMRAATE-VMVGGDAWRLYQYVCQHFIGTVSPNCKY 421
Query: 543 MRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQL 695
+R ++E S GGE FH G+ V G+TAIMPW AV+E+ LPSF KGE I++
Sbjct: 422 IRTKVELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEV 472
>ref|XP_004502266.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X2 [Cicer
arietinum]
Length = 753
Score = 296 bits (759), Expect = 3e-78
Identities = 137/229 (59%), Positives = 178/229 (77%)
Frame = +3
Query: 15 GYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVAS 194
GY++ L+W R+K+FD +VA+MFQ+LV G V + EK+E K RP GLNTVNLLKVAS
Sbjct: 136 GYEIQLEWQRSKLFDINVAMMFQKLVAEDGIFEVAEISEKQETKCRPVGLNTVNLLKVAS 195
Query: 195 SALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLL 374
SALG GP AMQ+AERLYTQG++SYPRTEST+YP +F+F L Q +P WG YV LL
Sbjct: 196 SALGFGPQMAMQLAERLYTQGFISYPRTESTSYPPSFDFHGALSAQTNNPTWGSYVKGLL 255
Query: 375 AKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKR 554
G+ + G D GDHPPITPM+SA+E L G DAWKLY+YI ++FI TVSPDCKY+RK+
Sbjct: 256 TSGYQKPRLGTDAGDHPPITPMKSASEDML-GNDAWKLYQYICQYFIGTVSPDCKYVRKK 314
Query: 555 IEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
+EFS GGE FH G+ VI+ G+TAIMPWL++N++++PSF+KG+ I+++K
Sbjct: 315 VEFSVGGEFFHCTGQHVITKGFTAIMPWLSINDKSIPSFTKGQKIKVTK 363
>ref|XP_004502265.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Cicer
arietinum]
Length = 859
Score = 296 bits (759), Expect = 3e-78
Identities = 137/229 (59%), Positives = 178/229 (77%)
Frame = +3
Query: 15 GYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVAS 194
GY++ L+W R+K+FD +VA+MFQ+LV G V + EK+E K RP GLNTVNLLKVAS
Sbjct: 242 GYEIQLEWQRSKLFDINVAMMFQKLVAEDGIFEVAEISEKQETKCRPVGLNTVNLLKVAS 301
Query: 195 SALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLL 374
SALG GP AMQ+AERLYTQG++SYPRTEST+YP +F+F L Q +P WG YV LL
Sbjct: 302 SALGFGPQMAMQLAERLYTQGFISYPRTESTSYPPSFDFHGALSAQTNNPTWGSYVKGLL 361
Query: 375 AKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKR 554
G+ + G D GDHPPITPM+SA+E L G DAWKLY+YI ++FI TVSPDCKY+RK+
Sbjct: 362 TSGYQKPRLGTDAGDHPPITPMKSASEDML-GNDAWKLYQYICQYFIGTVSPDCKYVRKK 420
Query: 555 IEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
+EFS GGE FH G+ VI+ G+TAIMPWL++N++++PSF+KG+ I+++K
Sbjct: 421 VEFSVGGEFFHCTGQHVITKGFTAIMPWLSINDKSIPSFTKGQKIKVTK 469
>ref|XP_002966408.1| hypothetical protein SELMODRAFT_168492 [Selaginella moellendorffii]
gi|300165828|gb|EFJ32435.1| hypothetical protein
SELMODRAFT_168492 [Selaginella moellendorffii]
Length = 871
Score = 296 bits (759), Expect = 3e-78
Identities = 138/233 (59%), Positives = 180/233 (77%)
Frame = +3
Query: 3 INKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLL 182
++K G+ L L W+R +VF++ A++ Q+ V+ SGS V ++ +KEERK RP GLNTVN+L
Sbjct: 226 LSKGGHSLQLDWERGRVFEQATALVPQKAVLKSGSLKVLDVSQKEERKARPTGLNTVNML 285
Query: 183 KVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYV 362
KVAS+ALGMGPHHAMQIAERLY QGY+SYPRTESTAYP++F+ + +L HP +GDY
Sbjct: 286 KVASTALGMGPHHAMQIAERLYVQGYISYPRTESTAYPASFDVKESLLPLGNHPVFGDYA 345
Query: 363 SSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKY 542
SL+A G K+G D GDHPPITPMRS TESEL GGDAW+LY+YI++HF+ +VSPDCKY
Sbjct: 346 RSLIAAGVRAPKSGTDAGDHPPITPMRSGTESEL-GGDAWRLYDYISRHFLGSVSPDCKY 404
Query: 543 MRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
R ++ FS GGE F G+ V SPG+T MPW+AV +ENLP+F+ GE++ S+
Sbjct: 405 KRTKVTFSGGGEVFTCSGKVVTSPGFTIAMPWMAVTDENLPAFTIGESLPCSE 457
>ref|XP_002978156.1| hypothetical protein SELMODRAFT_233065 [Selaginella moellendorffii]
gi|300154177|gb|EFJ20813.1| hypothetical protein
SELMODRAFT_233065 [Selaginella moellendorffii]
Length = 877
Score = 296 bits (759), Expect = 3e-78
Identities = 138/233 (59%), Positives = 180/233 (77%)
Frame = +3
Query: 3 INKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLL 182
++K G+ L L W+R +VF++ A++ Q+ V+ SGS V ++ +KEERK RP GLNTVN+L
Sbjct: 251 LSKGGHSLQLDWERGRVFEQATALVPQKAVLKSGSLKVLDVSQKEERKARPTGLNTVNML 310
Query: 183 KVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYV 362
KVAS+ALGMGPHHAMQIAERLY QGY+SYPRTESTAYP++F+ + +L HP +GDY
Sbjct: 311 KVASTALGMGPHHAMQIAERLYVQGYISYPRTESTAYPASFDVKESLLPLGNHPVFGDYA 370
Query: 363 SSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKY 542
SL+A G K+G D GDHPPITPMRS TESEL GGDAW+LY+YI++HF+ +VSPDCKY
Sbjct: 371 RSLIAAGVRAPKSGTDAGDHPPITPMRSGTESEL-GGDAWRLYDYISRHFLGSVSPDCKY 429
Query: 543 MRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQLSK 701
R ++ FS GGE F G+ V SPG+T MPW+AV +ENLP+F+ GE++ S+
Sbjct: 430 KRTKVTFSGGGEVFTCSGKVVTSPGFTIAMPWMAVTDENLPAFTIGESLPCSE 482
>dbj|BAD95240.1| putative DNA topoisomerase III beta [Arabidopsis thaliana]
Length = 865
Score = 296 bits (758), Expect = 4e-78
Identities = 139/231 (60%), Positives = 177/231 (76%)
Frame = +3
Query: 3 INKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLL 182
I K GY+L L+W+R ++FD + A +FQ+LV+ + V ++ EK+E KGRPAGLNTVNLL
Sbjct: 243 IRKDGYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVNLL 302
Query: 183 KVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYV 362
KVASSALG GP AM +AERLYTQG++SYPRTESTAYPS+F+F LR Q +P WG YV
Sbjct: 303 KVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYV 362
Query: 363 SSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKY 542
LL+ GFH K+G D GDHPPITPMR+ATE + GG AW+LY+Y+ +HF+ TVSP+CKY
Sbjct: 363 QRLLSDGFHMPKSGTDAGDHPPITPMRAATE-VMVGGVAWRLYQYVCQHFLGTVSPNCKY 421
Query: 543 MRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGETIQL 695
+R ++E S GGE FH G+ V G+TAIMPW AV+E+ LPSF KGE I++
Sbjct: 422 IRTKVELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEV 472