BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00013621
         (523 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002993716.1| hypothetical protein SELMODRAFT_449209 [Sela...   178   8e-43
ref|XP_002992734.1| hypothetical protein SELMODRAFT_451426 [Sela...   173   2e-41
ref|XP_002981882.1| hypothetical protein SELMODRAFT_451436 [Sela...   105   5e-21
ref|XP_002986002.1| hypothetical protein SELMODRAFT_451432 [Sela...   105   5e-21
ref|WP_007192574.1| multi-sensor hybrid histidine kinase [Thioca...    79   6e-13
ref|WP_019868053.1| hypothetical protein [Methylovulum miyakonense]    74   2e-11
ref|WP_007039292.1| multi-sensor hybrid histidine kinase [Thiorh...    74   2e-11
ref|YP_001003717.1| Hpt sensor hybrid histidine kinase [Halorhod...    74   2e-11
ref|YP_003997364.1| multi-sensor hybrid histidine kinase [Leadbe...    74   2e-11
gb|AHE48884.1| two-component system hybrid sensor histidine kina...    74   3e-11
ref|WP_022660535.1| histidine kinase [Desulfovibrio longus]            74   3e-11
ref|WP_019495587.1| hypothetical protein [Calothrix sp. PCC 7103]      73   3e-11
ref|WP_005325547.1| chemotaxis protein CheY [Aeromonas media] gi...    73   4e-11
ref|WP_018085357.1| hypothetical protein [Desulfurispora thermop...    72   8e-11
ref|WP_009616005.1| multi-sensor hybrid histidine kinase [Pseudo...    72   1e-10
ref|WP_022973632.1| histidine kinase [Xanthomonas sp. M97]             71   2e-10
ref|WP_010664109.1| histidine kinase [Marinilabilia salmonicolor]      71   2e-10
ref|YP_004531136.1| PAS domain-containing protein [Treponema pri...    71   2e-10
ref|WP_010256757.1| diguanylate cyclase [Treponema primitia]           70   2e-10
ref|WP_006786300.1| multi-sensor hybrid histidine kinase [Thiorh...    70   2e-10

>ref|XP_002993716.1| hypothetical protein SELMODRAFT_449209 [Selaginella moellendorffii]
           gi|300138440|gb|EFJ05208.1| hypothetical protein
           SELMODRAFT_449209 [Selaginella moellendorffii]
          Length = 679

 Score =  178 bits (451), Expect = 8e-43
 Identities = 89/159 (55%), Positives = 119/159 (74%)
 Frame = +2

Query: 32  SKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDCAKTMTNV 211
           +K+Q +A+V +NIRVPFNAIVLGLGH++A+   + +S    G+LDLV+LMLDCA+TMTNV
Sbjct: 235 AKQQFMAYVFHNIRVPFNAIVLGLGHMRASASGDDSS---SGELDLVQLMLDCAETMTNV 291

Query: 212 LDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPKVESLLTR 391
           LDDV D+G  E G +ELH + FDLLAVVKFL  GL + L  KQI L+++I+P    +L  
Sbjct: 292 LDDVTDMGNWEEGRIELHRDVFDLLAVVKFLAWGLKDLLEQKQISLNIDIDPVASKILKS 351

Query: 392 YHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELKWEE 508
           ++++GDKHR +QTLG FL N VKFTP    + LE+K +E
Sbjct: 352 HNIVGDKHRTVQTLGNFLSNAVKFTPTGGKLDLEIKCQE 390


>ref|XP_002992734.1| hypothetical protein SELMODRAFT_451426 [Selaginella moellendorffii]
           gi|300139475|gb|EFJ06215.1| hypothetical protein
           SELMODRAFT_451426 [Selaginella moellendorffii]
          Length = 440

 Score =  173 bits (439), Expect = 2e-41
 Identities = 87/154 (56%), Positives = 115/154 (74%)
 Frame = +2

Query: 47  LAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDCAKTMTNVLDDVA 226
           +A+V +NIRVPFNAIVLGLGH++A+   + +S    G+LDLV+LMLDCA+TMTNVLDDV 
Sbjct: 1   MAYVFHNIRVPFNAIVLGLGHMRASASGDDSS---SGELDLVQLMLDCAETMTNVLDDVT 57

Query: 227 DLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPKVESLLTRYHVLG 406
           D+G  E G +ELH + FDLLAVVKFL  GL + L  KQI L+++I+P    +L  ++++G
Sbjct: 58  DMGNWEEGRIELHRDVFDLLAVVKFLAWGLKDLLEQKQISLNIDIDPVASKILKSHNIVG 117

Query: 407 DKHRVLQTLGIFLGNVVKFTPHNSNIQLELKWEE 508
           DKHR +QTLG FL N VKFTP    + LE+K +E
Sbjct: 118 DKHRTVQTLGNFLSNAVKFTPTGGKLDLEIKCQE 151


>ref|XP_002981882.1| hypothetical protein SELMODRAFT_451436 [Selaginella moellendorffii]
           gi|300150324|gb|EFJ16975.1| hypothetical protein
           SELMODRAFT_451436 [Selaginella moellendorffii]
          Length = 526

 Score =  105 bits (263), Expect = 5e-21
 Identities = 53/165 (32%), Positives = 95/165 (57%), Gaps = 1/165 (0%)
 Frame = +2

Query: 11  EDKSAKCSK-RQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLD 187
           +D S + +K RQ ++++ + IRVPFNA+VLG+GHL A    E        + +++ +M  
Sbjct: 90  KDSSERIAKMRQFISYIFHEIRVPFNAVVLGIGHLLATNVSE-------EQQEVLNMMDS 142

Query: 188 CAKTMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEP 367
            + +M  +L+DV D+G+ E+G L+L  + F+L  +V  L+    + L  K +   + ++ 
Sbjct: 143 SSSSMIRILNDVLDMGKIESGKLQLEKQPFNLAELVSSLIWAFKDTLESKGLEFSLCVDD 202

Query: 368 KVESLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELKW 502
             +  L+ + ++GDKHR+ Q L  +L N  KFTP    ++L + W
Sbjct: 203 CTKEFLSTHDLVGDKHRIRQVLANYLSNATKFTPRGGRVKLHVVW 247


>ref|XP_002986002.1| hypothetical protein SELMODRAFT_451432 [Selaginella moellendorffii]
           gi|300146150|gb|EFJ12821.1| hypothetical protein
           SELMODRAFT_451432 [Selaginella moellendorffii]
          Length = 526

 Score =  105 bits (263), Expect = 5e-21
 Identities = 53/165 (32%), Positives = 95/165 (57%), Gaps = 1/165 (0%)
 Frame = +2

Query: 11  EDKSAKCSK-RQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLD 187
           +D S + +K RQ ++++ + IRVPFNA+VLG+GHL A    E        + +++ +M  
Sbjct: 90  KDSSERIAKMRQFISYIFHEIRVPFNAVVLGIGHLLATNVSE-------EQQEVLNMMDS 142

Query: 188 CAKTMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEP 367
            + +M  +L+DV D+G+ E+G L+L  + F+L  +V  L+    + L  K +   + ++ 
Sbjct: 143 SSSSMIRILNDVLDMGKIESGKLQLEKQPFNLAELVSSLIWAFKDTLESKGLEFSLCVDD 202

Query: 368 KVESLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELKW 502
             +  L+ + ++GDKHR+ Q L  +L N  KFTP    ++L + W
Sbjct: 203 CTKEFLSTHDLVGDKHRIRQVLANYLSNATKFTPRGGRVKLHVVW 247


>ref|WP_007192574.1| multi-sensor hybrid histidine kinase [Thiocapsa marina]
            gi|343800950|gb|EGV18894.1| multi-sensor hybrid histidine
            kinase [Thiocapsa marina 5811]
          Length = 1641

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 50/150 (33%), Positives = 83/150 (55%)
 Frame = +2

Query: 17   KSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDCAK 196
            +SA  SK   LA++ + IR P NAI+ GLGHL    E E+  P  + +   V  M+D A+
Sbjct: 1040 ESANRSKSAFLANMSHEIRTPMNAII-GLGHLL---EREVTDPKPRAQ---VGKMMDAAR 1092

Query: 197  TMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPKVE 376
             + ++++D+ DL + E G L L    F    +++     L  R + K + L+ +I+P++ 
Sbjct: 1093 HLLSIINDILDLSKIEAGQLTLEETNFSPAGLIQHAFSILGERATAKGLTLEQSIDPRIP 1152

Query: 377  SLLTRYHVLGDKHRVLQTLGIFLGNVVKFT 466
            ++L      GD HR+ Q L  +LGN +KF+
Sbjct: 1153 AML-----YGDAHRLGQILLNYLGNAIKFS 1177


>ref|WP_019868053.1| hypothetical protein [Methylovulum miyakonense]
          Length = 1263

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 54/170 (31%), Positives = 88/170 (51%)
 Frame = +2

Query: 11  EDKSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDC 190
           E + A  +K   LA++ + IR P NAIV GL HL   G H+       G+ D ++ + D 
Sbjct: 525 EAEQANQAKSAFLANMSHEIRTPMNAIV-GLAHLLQRGAHDA------GQQDKLQKITDS 577

Query: 191 AKTMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPK 370
           A+ +  +++D+ D+ + E+G L L    FDL  +++ + G +  ++  K + L ++  P 
Sbjct: 578 AQHLLAIINDILDIAKIESGKLTLEAINFDLETILQNVAGLVMEKIKGKGLELVVDTGPM 637

Query: 371 VESLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELKWEEELVH 520
             + L      GD+ R+ Q L  +L N VKFT H S I L  +  EE  H
Sbjct: 638 PVAQLN-----GDQTRLTQALLNYLSNAVKFTRHGS-IILRTRVLEESPH 681


>ref|WP_007039292.1| multi-sensor hybrid histidine kinase [Thiorhodococcus drewsii]
            gi|343922670|gb|EGV33369.1| multi-sensor hybrid histidine
            kinase [Thiorhodococcus drewsii AZ1]
          Length = 1786

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 54/165 (32%), Positives = 89/165 (53%)
 Frame = +2

Query: 17   KSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDCAK 196
            + A  +K   LA++ + IR P NAI LGL HL    E +   PD + +LD +      +K
Sbjct: 1143 EQANRAKSHFLANMSHEIRTPMNAI-LGLTHLLRQQESD---PDRRDRLDKIA---GASK 1195

Query: 197  TMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPKVE 376
             +  +++D+ DL + E   + L   EFDL AV++ +   +++++  K + L ++++P   
Sbjct: 1196 HLLQLINDILDLAKIEEQKIVLESAEFDLAAVLRNVCALVSDKVEAKNLELVVDLDPSTP 1255

Query: 377  SLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELKWEEE 511
                R  + GD  R+ Q L  FLGN VKFT H   I L ++ EE+
Sbjct: 1256 D---RIDLRGDPTRLSQILLNFLGNAVKFTEHGV-ICLRVRSEED 1296


>ref|YP_001003717.1| Hpt sensor hybrid histidine kinase [Halorhodospira halophila SL1]
           gi|500138934|ref|WP_011814937.1| Hpt sensor hybrid
           histidine kinase [Halorhodospira halophila]
           gi|121590335|gb|ABM62915.1| Hpt sensor hybrid histidine
           kinase [Halorhodospira halophila SL1]
          Length = 963

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 49/163 (30%), Positives = 84/163 (51%)
 Frame = +2

Query: 17  KSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDCAK 196
           + A  +K + LA++ + IR P NA+V GL  L    E        + +LD +K +   ++
Sbjct: 386 EQATRAKSEFLANMSHEIRTPMNAVV-GLSQLLLDTELN------ERQLDYLKKIQRSSR 438

Query: 197 TMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPKVE 376
            +  +++D+ D  + E+G LEL    FDL  V+  L    +    +K+I L   I+P++ 
Sbjct: 439 MLLGIINDILDFSRIESGQLELDTGPFDLGEVIDHLATLFSEAAREKEIELIYAIQPELP 498

Query: 377 SLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELKWE 505
            +L     +GD  R+ Q L   L N +KFTP    ++LE++ E
Sbjct: 499 RML-----VGDSLRITQVLTNLLSNAIKFTPRGGTVELEVREE 536


>ref|YP_003997364.1| multi-sensor hybrid histidine kinase [Leadbetterella byssophila DSM
           17132] gi|503173400|ref|WP_013408061.1| histidine kinase
           [Leadbetterella byssophila] gi|311906570|gb|ADQ17011.1|
           multi-sensor hybrid histidine kinase [Leadbetterella
           byssophila DSM 17132]
          Length = 1076

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 45/157 (28%), Positives = 81/157 (51%)
 Frame = +2

Query: 35  KRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDCAKTMTNVL 214
           K Q LA++ + IR P N I+   G +    E E+     K + + V  + + ++T+  +L
Sbjct: 568 KEQFLANMSHEIRTPMNGII---GMIDVLNETELD----KSQREYVNTIRNSSETLLTIL 620

Query: 215 DDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPKVESLLTRY 394
           +D+ DL + E G + +  + FDL  ++K LV     + ++    L    +PKV       
Sbjct: 621 NDILDLSKLEAGQMNVEKKPFDLKEMLKNLVALFKQKAAETNNLLKFEWDPKVHP----- 675

Query: 395 HVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELKWE 505
           +++GD+ R+LQ L     N +KFT  N N+ + ++WE
Sbjct: 676 YIIGDRIRLLQILSNLTSNAIKFT-QNGNVIIRIQWE 711


>gb|AHE48884.1| two-component system hybrid sensor histidine kinase/response
           regulator [Aeromonas hydrophila 4AK4]
          Length = 693

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 57/167 (34%), Positives = 80/167 (47%)
 Frame = +2

Query: 11  EDKSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDC 190
           E +SA  +K Q LA + + IR P NA VLG+  L   G  E       G           
Sbjct: 326 EAESANRAKSQFLAMMTHEIRSPMNA-VLGMLDLLQHGRLETPQQTLLGHAT------HS 378

Query: 191 AKTMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPK 370
           A  +  ++DDV D  + E+  L LH E F    + + LV  L  + S K I L   ++ +
Sbjct: 379 AHLLQTIIDDVLDFSKIESHTLALHCEPFQPAELCRALVEPLQAQASAKGIALHWQLDEE 438

Query: 371 VESLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELKWEEE 511
           V S     H+ GD  R+ Q +G  LGN VKFT   S ++L L W++E
Sbjct: 439 VPS-----HLQGDAVRLSQVIGNLLGNAVKFTAAGS-VRLALAWQDE 479


>ref|WP_022660535.1| histidine kinase [Desulfovibrio longus]
          Length = 917

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 51/152 (33%), Positives = 79/152 (51%)
 Frame = +2

Query: 11  EDKSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDC 190
           E + A  +K   LA++ + IR P NAI  GL  +   G+    +P   G+ D ++ +LD 
Sbjct: 380 EAERANKAKSDFLANMSHEIRTPLNAIN-GLTEIVLQGD---LAP---GQRDALETVLDS 432

Query: 191 AKTMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPK 370
           A+ + NV +D+ D   AE+  LEL I +FDL  V++ ++  L  +   K + L ++I+P 
Sbjct: 433 AEHLLNVFNDILDFSLAESNRLELSISDFDLHTVLRSVINALRLQTEAKGLLLQLHIDPN 492

Query: 371 VESLLTRYHVLGDKHRVLQTLGIFLGNVVKFT 466
               L      GD  R+ Q L    GN VKFT
Sbjct: 493 TPRFLR-----GDPGRLRQVLFNLCGNAVKFT 519


>ref|WP_019495587.1| hypothetical protein [Calothrix sp. PCC 7103]
          Length = 564

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
 Frame = +2

Query: 11  EDKSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDC 190
           E ++A   K + LA + + +R P N+I   LG  K     +    +    L++V+     
Sbjct: 287 EAENANRLKDEFLAVLSHELRTPLNSI---LGWAKLLQRQKFDEKNIARGLEIVERN--- 340

Query: 191 AKTMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPK 370
           A   T +++D+ D+ +   G L+L++   +L ++V   V G+      K++ LD  IEP 
Sbjct: 341 ALLQTQLINDILDVSRIMRGKLKLNLTPVNLESLVLQTVNGVRVEAEAKKLHLDCIIEPL 400

Query: 371 VESLLTR---------YHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELKWEEE 511
            E+L T+         Y V GD +R+ Q +G  L N +KFTP N NIQ++L  + E
Sbjct: 401 SEALATQSYTDIQGASYIVTGDINRLQQVVGNLLSNALKFTPPNGNIQVKLYLDNE 456


>ref|WP_005325547.1| chemotaxis protein CheY [Aeromonas media]
           gi|407184881|gb|EKE58693.1| two-component system hybrid
           sensor histidine kinase/response regulator [Aeromonas
           media WS]
          Length = 693

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 56/167 (33%), Positives = 80/167 (47%)
 Frame = +2

Query: 11  EDKSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDC 190
           E +SA  +K Q LA + + IR P NA VLG+  L   G  E       G           
Sbjct: 326 EAESANRAKSQFLAMMTHEIRSPMNA-VLGMLDLLQHGRLETPQQTLLGHAT------HS 378

Query: 191 AKTMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPK 370
           A  +  ++DDV D  + E+  L LH E F    + + LV  L  +   K I L   ++ +
Sbjct: 379 AHLLQTIIDDVLDFSKIESHTLALHCEPFQSAELCRALVEPLQAQARAKGIALHWQLDEQ 438

Query: 371 VESLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELKWEEE 511
           V S     H+ GD  R+ Q +G  LGN VKFT   S ++L L+W++E
Sbjct: 439 VPS-----HLQGDAVRLSQVIGNLLGNAVKFTAAGS-VRLALEWQDE 479


>ref|WP_018085357.1| hypothetical protein [Desulfurispora thermophila]
          Length = 723

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 53/163 (32%), Positives = 80/163 (49%)
 Frame = +2

Query: 17  KSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDCAK 196
           ++A  +K Q LAH+ + IR P NAI+ G+  L       + +P    + + ++L+ D A 
Sbjct: 172 EAASQAKSQFLAHMSHEIRTPMNAII-GMADLL------LGTPLNHEQQEYLRLLQDSAL 224

Query: 197 TMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPKVE 376
           ++ ++L+DV DL + E G LEL  E FDL  +V+     L  R   K + +   I+  V 
Sbjct: 225 SLLDILNDVLDLAKVEAGKLELSQERFDLHRLVEQTFAALAVRARQKGLAVSCRIDQVVP 284

Query: 377 SLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELKWE 505
                  V GD  R+ Q L   LGN +KFT       L   WE
Sbjct: 285 Q-----QVYGDPGRLRQVLVNLLGNAIKFTESGRVELLVQMWE 322


>ref|WP_009616005.1| multi-sensor hybrid histidine kinase [Pseudomonas sp. M1]
           gi|568074669|gb|ETM67522.1| hypothetical protein
           PM1_0215180 [Pseudomonas sp. M1]
          Length = 787

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 52/165 (31%), Positives = 88/165 (53%)
 Frame = +2

Query: 5   DAEDKSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLML 184
           D  +++A+  K + LA+V + IR P N I++GL HL      +    D+ GK+       
Sbjct: 440 DLAEQAARL-KSEFLANVSHEIRTPLN-IIIGLAHLLEQTALDPQQRDYLGKIQ------ 491

Query: 185 DCAKTMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIE 364
              + +  ++ D+ DL + E G LE    +FDL  ++  LV  L  R + K + L+ +I+
Sbjct: 492 GSGQYLLELISDILDLSKVEAGRLEFEHLDFDLERLLGELVDLLAIRAAGKGLSLECHID 551

Query: 365 PKVESLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELK 499
           P++ S     H+LGD  R+ Q L  +  N +KFT H S ++LE++
Sbjct: 552 PRLPS-----HLLGDSLRLRQILMNYGNNALKFTEHGS-LELEVR 590


>ref|WP_022973632.1| histidine kinase [Xanthomonas sp. M97]
          Length = 769

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
 Frame = +2

Query: 17  KSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDCAK 196
           ++A  +K + LA + + IR P N I+  L  L A G+  +       + D+++   D ++
Sbjct: 105 EAAALAKGEFLATMSHEIRTPLNGIIPML-ELIARGDLSL------DQRDMLQTASDSSQ 157

Query: 197 TMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPKVE 376
            +  ++DD+ D  + E   LEL I  F+L  ++  +V  +      KQ+ L ++IEP V 
Sbjct: 158 QLLRIVDDILDYSKLEANKLELEITTFNLRELLDGVVQLMQRTAEGKQLRLGLDIEPAVR 217

Query: 377 SLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNS-NIQLELKWEEELVH 520
            L     V GD  R+ Q LG  +GN +KFT   S NIQL    E    H
Sbjct: 218 LL-----VRGDPIRLRQVLGNLIGNAIKFTERGSVNIQLRRLGETRAQH 261


>ref|WP_010664109.1| histidine kinase [Marinilabilia salmonicolor]
          Length = 1424

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
 Frame = +2

Query: 17   KSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDCAK 196
            ++A  +K   LA + + IR P NAI+ G  HL       + +  F+G+ D +K +   ++
Sbjct: 770  ENATRAKSDFLARMSHEIRTPLNAII-GWTHLG------LENSGFRGQSDYLKRIQSSSR 822

Query: 197  TMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPKVE 376
            ++  +++D+ D  + E G LEL   +FDL  V++ L   +  R ++K + L  +I+PKV 
Sbjct: 823  SLLGIINDILDFSKIEAGRLELEYIDFDLEQVLQNLADMVLFRANEKNLELVFDIDPKVP 882

Query: 377  SLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPH-NSNIQLELKWEE 508
              L     +GD  R+ Q L   + N VKFT   + N+++ LK  E
Sbjct: 883  LSL-----VGDPLRLEQVLINLVNNAVKFTDKGHVNVKISLKSSE 922


>ref|YP_004531136.1| PAS domain-containing protein [Treponema primitia ZAS-2]
           gi|505822871|ref|WP_015708263.1| diguanylate cyclase
           [Treponema primitia] gi|333739741|gb|AEF85231.1| PAS
           domain protein [Treponema primitia ZAS-2]
          Length = 825

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 46/161 (28%), Positives = 83/161 (51%)
 Frame = +2

Query: 17  KSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDCAK 196
           + A  +K Q L+++ + IR P  AI+ G+  +  A      S D   K D +  +   ++
Sbjct: 441 EQANIAKSQFLSNMSHEIRTPIGAII-GMTSIAKA------SADLSRKDDCLNKIEGASR 493

Query: 197 TMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPKVE 376
            +  V++D+ D+ + E G LEL   +FD   +++ +   +N R+++K+  L ++I+  + 
Sbjct: 494 HLLGVVNDILDMSKIEAGKLELACVDFDFEKMIRNIASMINFRVAEKKQVLTVHIDEAIP 553

Query: 377 SLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELK 499
                 ++ GD  R+ Q L   LGN VKFTP    I LE +
Sbjct: 554 R-----NLRGDDQRLSQVLTNLLGNAVKFTPSGGGIYLEAR 589


>ref|WP_010256757.1| diguanylate cyclase [Treponema primitia]
          Length = 814

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 44/161 (27%), Positives = 82/161 (50%)
 Frame = +2

Query: 17  KSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDCAK 196
           + A  +K Q L+++ + IR P  AI+ G+  +  A    +   D   K++        ++
Sbjct: 429 EQANIAKSQFLSNMSHEIRTPIGAII-GMTSIAKASTDSLRKDDCLNKIE------GASR 481

Query: 197 TMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPKVE 376
            +  V++D+ D+ + E G LEL   +FD   +++ +   +N R+++K+  L ++I+  + 
Sbjct: 482 HLLGVVNDILDMSKIEAGKLELVSADFDFEKMIRNITNMINFRVAEKKQVLTVHIDEAIP 541

Query: 377 SLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLELK 499
                 ++ GD  R+ Q L   LGN VKFTP    I LE +
Sbjct: 542 R-----NLRGDDQRLSQVLTNLLGNAVKFTPEGGGIYLEAR 577


>ref|WP_006786300.1| multi-sensor hybrid histidine kinase [Thiorhodospira sibirica]
            gi|349796831|gb|EGZ50614.1| multi-sensor hybrid histidine
            kinase [Thiorhodospira sibirica ATCC 700588]
          Length = 1360

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 51/162 (31%), Positives = 82/162 (50%)
 Frame = +2

Query: 11   EDKSAKCSKRQLLAHVMNNIRVPFNAIVLGLGHLKAAGEHEIASPDFKGKLDLVKLMLDC 190
            E + A   K Q LA++ + IR P NA++ GL HL       + +P  +G+LD +  + D 
Sbjct: 619  EAERANQLKGQFLANMSHEIRTPLNAVI-GLSHLL------LQTPLNEGQLDYLHKIHDS 671

Query: 191  AKTMTNVLDDVADLGQAENGLLELHIEEFDLLAVVKFLVGGLNNRLSDKQIFLDMNIEPK 370
            A+ +  +++D+ D  + E G LEL I+ F L  +++ +        S K + L   I P 
Sbjct: 672  ARILLAIINDILDYAKIEAGKLELEIQPFSLHELIQQMGTLFAAAASQKNLELLFQIHPD 731

Query: 371  VESLLTRYHVLGDKHRVLQTLGIFLGNVVKFTPHNSNIQLEL 496
            V   L     +GD+ R+ Q L   LGN +KFT H   + L +
Sbjct: 732  VPDRL-----IGDRLRLGQILTNLLGNAIKFT-HQGTVSLRI 767