BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00013520
         (458 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [A...   126   3e-27
ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Caps...   104   1e-20
ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495...   103   3e-20
ref|XP_002327104.1| predicted protein [Populus trichocarpa] gi|5...    94   2e-17
ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|33200777...    91   1e-16
ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana] gi|75328911...    91   1e-16
ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arab...    91   1e-16
gb|AAM61481.1| unknown [Arabidopsis thaliana]                          89   6e-16
ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Ch...    88   1e-15
ref|XP_002953456.1| hypothetical protein VOLCADRAFT_82305 [Volvo...    87   2e-15
ref|XP_006393529.1| hypothetical protein EUTSA_v10011640mg [Eutr...    87   2e-15
ref|XP_002510278.1| conserved hypothetical protein [Ricinus comm...    86   7e-15
ref|XP_006361790.1| PREDICTED: protein OSB2, chloroplastic-like ...    84   2e-14
ref|XP_004246681.1| PREDICTED: protein OSB2, chloroplastic-like ...    84   2e-14
gb|AAX34397.1| mitochondrial SBP40 [Solanum tuberosum]                 84   2e-14
ref|XP_003633203.1| PREDICTED: protein OSB2, chloroplastic-like ...    84   3e-14
emb|CBI17867.3| unnamed protein product [Vitis vinifera]               84   3e-14
ref|XP_002330744.1| predicted protein [Populus trichocarpa]            83   3e-14
gb|ESW24981.1| hypothetical protein PHAVU_004G177000g [Phaseolus...    81   2e-13
ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidop...    80   2e-13

>ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [Amborella trichopoda]
           gi|548848280|gb|ERN07383.1| hypothetical protein
           AMTR_s00019p00240430 [Amborella trichopoda]
          Length = 500

 Score =  126 bits (316), Expect = 3e-27
 Identities = 68/152 (44%), Positives = 84/152 (55%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKKDLWK 181
           KW D+RK+K    +PDFK   TGEALWL+G     WV   L+KL          K  LW+
Sbjct: 313 KWCDNRKVKTQPTHPDFKHKETGEALWLDGPKAE-WV---LSKLKTLEIDQRQDKGHLWE 368

Query: 182 TFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKDEAFAASP 361
             F+DPSKW DNRK+K    HPDFKHK+T E LW+ GIK P WV   L  L+ +      
Sbjct: 369 DLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLSKLKTLEIDQRQNKD 427

Query: 362 SIEGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
           S    W    ++  KW+D R +K   K PDFK
Sbjct: 428 S-NDLWKDLVANRDKWWDNRLSKVNPKAPDFK 458



 Score =  119 bits (299), Expect = 3e-25
 Identities = 62/158 (39%), Positives = 88/158 (55%), Gaps = 7/158 (4%)
 Frame = +2

Query: 5   WFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKKDL--- 175
           W+D+R  K++ +YPDF+  ++ EALWL+  T  + ++ + +    A FA     + +   
Sbjct: 240 WYDNRFDKRNPRYPDFRNKNSKEALWLDKHTPDSVLSALESPEFCAKFANGQKIEKIRAD 299

Query: 176 ----WKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKDE 343
               W+  F+DPSKW DNRK+K    HPDFKHK+T E LW+ G K   WV   L  L+ +
Sbjct: 300 IGHRWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGPKA-EWVLSKLKTLEID 358

Query: 344 AFAASPSIEGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
                  +   W+  F+DPSKW D RK K    HPDFK
Sbjct: 359 QRQDKGHL---WEDLFADPSKWCDNRKVKTQPTHPDFK 393



 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 52/118 (44%), Positives = 65/118 (55%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKKDLWK 181
           KW D+RK+K    +PDFK   TGEALWL+G   P WV   L  L E     +    DLWK
Sbjct: 376 KWCDNRKVKTQPTHPDFKHKETGEALWLDG-IKPEWVLSKLKTL-EIDQRQNKDSNDLWK 433

Query: 182 TFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKDEAFAA 355
              ++  KW+DNR  K + K PDFKHKD+ + LW+ G  TP W    L   K +  AA
Sbjct: 434 DLVANRDKWWDNRLSKVNPKAPDFKHKDSGKGLWLNG-STPDWALTNLTPSKAKEEAA 490



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 9/104 (8%)
 Frame = +2

Query: 173 LWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLW---------IKGIKTPSWVAPML 325
           LWK  F+ P  W+DNR  K++ ++PDF++K++ E LW         +  +++P + A   
Sbjct: 229 LWKELFAKPYNWYDNRFDKRNPRYPDFRNKNSKEALWLDKHTPDSVLSALESPEFCAKFA 288

Query: 326 NNLKDEAFAASPSIEGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
           N  K E   A   I   W+  F+DPSKW D RK K    HPDFK
Sbjct: 289 NGQKIEKIRA--DIGHRWEDLFADPSKWCDNRKVKTQPTHPDFK 330


>ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Capsella rubella]
           gi|482549189|gb|EOA13383.1| hypothetical protein
           CARUB_v10026422mg [Capsella rubella]
          Length = 437

 Score =  104 bits (259), Expect = 1e-20
 Identities = 64/170 (37%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
 Frame = +2

Query: 2   KWFDDRKLKKSS----KYPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKK 169
           +WFD R  K +     K+PDFK  + G +LWL   T P W    L++L    F  +   K
Sbjct: 238 EWFDHRGNKANGLVKPKHPDFKRKAGGLSLWLS--TVPDWALLKLDELEFDVFVPNGDIK 295

Query: 170 -------DLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWV----A 316
                  + WK    +P KWFDNR  K + K PDFKHK+T E LW+    +P WV     
Sbjct: 296 LKQLKGEESWKDLVQNPDKWFDNRSEKTNVKAPDFKHKETGEALWM--TDSPIWVLSKLP 353

Query: 317 PMLNNLKDEAFAASPSI---EGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
           P+  N +    + + S+   E SW +   DPSKW+D R  K+  K PDFK
Sbjct: 354 PLKKNQERPLMSNTVSLHKKEESWKNLVEDPSKWWDNRVDKRNPKGPDFK 403



 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 52/119 (43%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVA---PMLNKLHEAAFATSP---- 160
           KWFD+R  K + K PDFK   TGEALW+    +P WV    P L K  E    ++     
Sbjct: 314 KWFDNRSEKTNVKAPDFKHKETGEALWMTD--SPIWVLSKLPPLKKNQERPLMSNTVSLH 371

Query: 161 SKKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLK 337
            K++ WK    DPSKW+DNR  K++ K PDFKHK+T E LWI    +P+W    L  L+
Sbjct: 372 KKEESWKNLVEDPSKWWDNRVDKRNPKGPDFKHKETGEALWIS--SSPTWALSELPPLE 428



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
 Frame = +2

Query: 176 WKTFFSDPSKWFDNRKIKKSN----KHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKDE 343
           WK    +P +WFD+R  K +     KHPDFK K     LW+  +  P W    L+ L+ +
Sbjct: 229 WKHLIENPKEWFDHRGNKANGLVKPKHPDFKRKAGGLSLWLSTV--PDWALLKLDELEFD 286

Query: 344 AFAASPSI-------EGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
            F  +  I       E SW     +P KWFD R  K   K PDFK
Sbjct: 287 VFVPNGDIKLKQLKGEESWKDLVQNPDKWFDNRSEKTNVKAPDFK 331


>ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495963|gb|AES77166.1|
           Protein OSB3 [Medicago truncatula]
          Length = 491

 Score =  103 bits (256), Expect = 3e-20
 Identities = 61/172 (35%), Positives = 88/172 (51%), Gaps = 20/172 (11%)
 Frame = +2

Query: 2   KWFDDRKLKKSS----KYPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKK 169
           KW+D R  K++     KYPDFK      ++WL+  +       +L++L E  F T P K 
Sbjct: 287 KWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWLDKASKS-----VLSRLKELEFDTPPVKP 341

Query: 170 ---------DLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPM 322
                    + W     +P+KW+DNR  KK  + PDFKHKDT   LW++   +PSWV+  
Sbjct: 342 KQTKDSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWLR--DSPSWVSSR 399

Query: 323 LNNLKDEAFAA-------SPSIEGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
           L  L+ E+ +        S   + SW+    +P+KW+D R  KK  K PDFK
Sbjct: 400 LKELEVESTSVKSKQAKDSKGSDESWNDLLQNPAKWWDNRLDKKNPKGPDFK 451



 Score =  101 bits (251), Expect = 1e-19
 Identities = 58/133 (43%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVAPMLNKLH-EAAFATSPSKKDL- 175
           KW+D+R  KK ++ PDFK   TG  LWL  + +P+WV+  L +L  E+    S   KD  
Sbjct: 362 KWWDNRVDKKYARAPDFKHKDTGVGLWL--RDSPSWVSSRLKELEVESTSVKSKQAKDSK 419

Query: 176 -----WKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKD 340
                W     +P+KW+DNR  KK+ K PDFKHKDT E LW++G  +PSWV P L  LK 
Sbjct: 420 GSDESWNDLLQNPAKWWDNRLDKKNPKGPDFKHKDTGEALWLRG--SPSWVLPKLPPLKP 477

Query: 341 EAFAASPSIEGSW 379
           +      S E SW
Sbjct: 478 K----QQSAETSW 486



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 14/166 (8%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKKDLWK 181
           +W      K+S K  DF+  + GE            + P L +   +A   + S    W 
Sbjct: 232 QWKAVHSPKESPKNADFESKTEGE------------LQPGLKQSTTSAKKYTGSLSSTWG 279

Query: 182 TFFSDPSKWFDNRKIKKSN----KHPDFKHKDTHEPLWI-KGIKTPSWVAPMLNNLKDEA 346
               DP KW+D R  K++     K+PDFK KD +  +W+ K  K+      +L+ LK+  
Sbjct: 280 DLLDDPKKWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWLDKASKS------VLSRLKELE 333

Query: 347 FAASP---------SIEGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
           F   P           + SW+    +P+KW+D R  KK  + PDFK
Sbjct: 334 FDTPPVKPKQTKDSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFK 379


>ref|XP_002327104.1| predicted protein [Populus trichocarpa]
           gi|566202259|ref|XP_006375003.1| hypothetical protein
           POPTR_0014s03490g [Populus trichocarpa]
           gi|550323317|gb|ERP52800.1| hypothetical protein
           POPTR_0014s03490g [Populus trichocarpa]
          Length = 371

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKKD--- 172
           +W+D+RK KK+SK PDFK   +G+ALWL     P W+   L  L   A      ++    
Sbjct: 234 EWWDNRKFKKNSKLPDFKHKISGDALWLR-PDDPLWIKTKLQLLDWKAGEHCEEERHKNH 292

Query: 173 --LWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWV 313
             LW+ FF+ P +W+DNRK KK++  PDFKHKDT E LW+     P WV
Sbjct: 293 LYLWQVFFASPHEWWDNRKNKKNSASPDFKHKDTGEALWLSP-NDPPWV 340



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
 Frame = +2

Query: 173 LWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKDEAFA 352
           LWK FFS P +W+DNRK KK++K PDFKHK + + LW++    P W+   L  L  +A  
Sbjct: 224 LWKAFFSSPHEWWDNRKFKKNSKLPDFKHKISGDALWLRP-DDPLWIKTKLQLLDWKAGE 282

Query: 353 ASPSIEGS-----WDSFFSDPSKWFDYRKTKKTNKHPDFK 457
                        W  FF+ P +W+D RK KK +  PDFK
Sbjct: 283 HCEEERHKNHLYLWQVFFASPHEWWDNRKNKKNSASPDFK 322


>ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|332007778|gb|AED95161.1|
           protein OSB3 [Arabidopsis thaliana]
          Length = 442

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 52/133 (39%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVA---PMLNKLHEAAFATSP---- 160
           KW D+R  K + KYPDFK   TGEALW+    +P WV    P L K  E  F ++     
Sbjct: 305 KWLDNRSDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPFMSNKVSQL 362

Query: 161 --------------SKKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIK 298
                          ++++WK    +PSKW+DNR  K++ K PDFKHK+T E LWI    
Sbjct: 363 ELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIG--D 420

Query: 299 TPSWVAPMLNNLK 337
           +P+W    L  LK
Sbjct: 421 SPTWALSKLPPLK 433



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 63/189 (33%), Positives = 82/189 (43%), Gaps = 37/189 (19%)
 Frame = +2

Query: 2   KWFDDRKLKKSSK----YPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSK- 166
           +W D R  K +      +PDFK    G +LWL   T P W    L KL E  F     K 
Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS--TAPDWA---LLKLEELKFDVLVPKG 281

Query: 167 -------KDL----WKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWV 313
                  KD+    WK    +P KW DNR  K + K+PDFKHK+T E LW+    +P WV
Sbjct: 282 NIKLNQLKDIGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--TNSPIWV 339

Query: 314 ---APMLNNLKDEAFAASP------------------SIEGSWDSFFSDPSKWFDYRKTK 430
               P L   ++  F ++                     E  W +   +PSKW+D R  K
Sbjct: 340 LSKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDK 399

Query: 431 KTNKHPDFK 457
           +  K PDFK
Sbjct: 400 RNPKGPDFK 408



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/107 (32%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
 Frame = +2

Query: 176 WKTFFSDPSKWFDNRKIKKSN----KHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKDE 343
           WK    +P +W D+R  K +      HPDFK K     LW+     P W    L  LK +
Sbjct: 218 WKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS--TAPDWALLKLEELKFD 275

Query: 344 AFAASPSI---------EGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
                 +I         E SW     +P KW D R  K   K+PDFK
Sbjct: 276 VLVPKGNIKLNQLKDIGEESWKDLVQNPDKWLDNRSDKTNVKYPDFK 322


>ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana]
           gi|75328911|sp|Q8GWJ4.1|OSB3_ARATH RecName: Full=Protein
           OSB3, chloroplastic/mitochondrial; AltName:
           Full=Organellar single-stranded DNA-binding protein 3;
           Flags: Precursor gi|26452626|dbj|BAC43396.1| unknown
           protein [Arabidopsis thaliana]
           gi|28973013|gb|AAO63831.1| unknown protein [Arabidopsis
           thaliana] gi|30102734|gb|AAP21285.1| At5g44785
           [Arabidopsis thaliana] gi|110743279|dbj|BAE99530.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332007779|gb|AED95162.1| protein OSB3 [Arabidopsis
           thaliana]
          Length = 440

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 52/133 (39%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVA---PMLNKLHEAAFATSP---- 160
           KW D+R  K + KYPDFK   TGEALW+    +P WV    P L K  E  F ++     
Sbjct: 303 KWLDNRSDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPFMSNKVSQL 360

Query: 161 --------------SKKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIK 298
                          ++++WK    +PSKW+DNR  K++ K PDFKHK+T E LWI    
Sbjct: 361 ELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIG--D 418

Query: 299 TPSWVAPMLNNLK 337
           +P+W    L  LK
Sbjct: 419 SPTWALSKLPPLK 431



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 61/187 (32%), Positives = 81/187 (43%), Gaps = 35/187 (18%)
 Frame = +2

Query: 2   KWFDDRKLKKSSK----YPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKK 169
           +W D R  K +      +PDFK    G +LWL   T P W    L KL E  F     K 
Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS--TAPDWA---LLKLEELKFDVLVPKG 281

Query: 170 DL----------WKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWV-- 313
           ++          WK    +P KW DNR  K + K+PDFKHK+T E LW+    +P WV  
Sbjct: 282 NIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--TNSPIWVLS 339

Query: 314 -APMLNNLKDEAFAASP------------------SIEGSWDSFFSDPSKWFDYRKTKKT 436
             P L   ++  F ++                     E  W +   +PSKW+D R  K+ 
Sbjct: 340 KLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRN 399

Query: 437 NKHPDFK 457
            K PDFK
Sbjct: 400 PKGPDFK 406



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/105 (33%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
 Frame = +2

Query: 176 WKTFFSDPSKWFDNRKIKKSN----KHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKDE 343
           WK    +P +W D+R  K +      HPDFK K     LW+     P W    L  LK +
Sbjct: 218 WKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS--TAPDWALLKLEELKFD 275

Query: 344 AFAASPSI-------EGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
                 +I       E SW     +P KW D R  K   K+PDFK
Sbjct: 276 VLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFK 320


>ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
           lyrata] gi|297309381|gb|EFH39805.1| hypothetical protein
           ARALYDRAFT_494502 [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 62/184 (33%), Positives = 81/184 (44%), Gaps = 32/184 (17%)
 Frame = +2

Query: 2   KWFDDRKLKKSSK----YPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKK 169
           +W D R  K +      +PDFK    G +LWL   T P W  P L +L         + K
Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS--TAPDWALPKLKELEFDVLVPKGNIK 284

Query: 170 -------DLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLN 328
                  + WK    +P KW DNR  K + K+PDFKHK+T E LW+    +P WV   L 
Sbjct: 285 LNQLKGEESWKDLVQNPDKWLDNRLDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLP 342

Query: 329 NLK--DEAFAASPSI-------------------EGSWDSFFSDPSKWFDYRKTKKTNKH 445
            LK   E    S ++                   E SW +   +PSKW+D R  K+  K 
Sbjct: 343 PLKKNQERPLMSNTVPQLELDVVVPNGNLTQLKREESWKNLVENPSKWWDNRLDKRNPKA 402

Query: 446 PDFK 457
           PDFK
Sbjct: 403 PDFK 406



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 52/133 (39%), Positives = 66/133 (49%), Gaps = 21/133 (15%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVA---PMLNKLHEAAFA------- 151
           KW D+R  K + KYPDFK   TGEALW+    +P WV    P L K  E           
Sbjct: 303 KWLDNRLDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPLMSNTVPQL 360

Query: 152 -----------TSPSKKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIK 298
                      T   +++ WK    +PSKW+DNR  K++ K PDFKHK+T E LWI    
Sbjct: 361 ELDVVVPNGNLTQLKREESWKNLVENPSKWWDNRLDKRNPKAPDFKHKETGEVLWINN-N 419

Query: 299 TPSWVAPMLNNLK 337
           +P+W    L  LK
Sbjct: 420 SPTWALSKLPPLK 432



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 11/105 (10%)
 Frame = +2

Query: 176 WKTFFSDPSKWFDNRKIKKSN----KHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKDE 343
           WK    +P +W D+R  K +      HPDFK K     LW+     P W  P L  L+ +
Sbjct: 218 WKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS--TAPDWALPKLKELEFD 275

Query: 344 AFAASPSI-------EGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
                 +I       E SW     +P KW D R  K   K+PDFK
Sbjct: 276 VLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRLDKTNVKYPDFK 320


>gb|AAM61481.1| unknown [Arabidopsis thaliana]
          Length = 440

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 21/133 (15%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVA---PMLNKLHEAAFATSP---- 160
           KW D+R  K + KYPDFK   TGEALW+    +P WV    P L K  E    ++     
Sbjct: 303 KWLDNRSDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPLMSNKVSQL 360

Query: 161 --------------SKKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIK 298
                          ++++WK    +PSKW+DNR  K++ K PDFKHK+T E LWI    
Sbjct: 361 ELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIG--D 418

Query: 299 TPSWVAPMLNNLK 337
           +P+W    L  LK
Sbjct: 419 SPTWALSKLPPLK 431



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 63/187 (33%), Positives = 80/187 (42%), Gaps = 35/187 (18%)
 Frame = +2

Query: 2   KWFDDRKLKKSSK----YPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKK 169
           +W D R  K +      +PDFK    G +LWL   T P W    L KL E  F     K 
Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS--TAPDWA---LLKLEELKFDVLVPKG 281

Query: 170 DL----------WKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAP 319
           ++          WK    +P KW DNR  K + K+PDFKHK+T E LW+    +P WV  
Sbjct: 282 NIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMTN--SPIWVLS 339

Query: 320 MLNNLK--DEAFAASPSI-------------------EGSWDSFFSDPSKWFDYRKTKKT 436
            L  LK   E    S  +                   E  W +   +PSKW+D R  K+ 
Sbjct: 340 KLPPLKKNQERPLMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRN 399

Query: 437 NKHPDFK 457
            K PDFK
Sbjct: 400 PKGPDFK 406



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/105 (33%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
 Frame = +2

Query: 176 WKTFFSDPSKWFDNRKIKKSNK----HPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKDE 343
           WK    +P +W D+R  K +      HPDFK K     LW+     P W    L  LK +
Sbjct: 218 WKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS--TAPDWALLKLEELKFD 275

Query: 344 AFAASPSI-------EGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
                 +I       E SW     +P KW D R  K   K+PDFK
Sbjct: 276 VLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFK 320


>ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Chlamydomonas
           reinhardtii] gi|37545634|gb|AAM76787.1| RNA-binding
           protein RB38 [Chlamydomonas reinhardtii]
           gi|37723144|gb|AAP30010.1| 38 kDa RNA-binding protein
           [Chlamydomonas reinhardtii] gi|158270704|gb|EDO96540.1|
           chloroplast-targeted RNA-binding protein [Chlamydomonas
           reinhardtii]
          Length = 382

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 46/198 (23%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDF-KCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSK---- 166
           +W+D+R  K S + PDF +      ALWL+ +  P WV  +L +L E   A    +    
Sbjct: 150 EWYDNRNRKTSDRQPDFVRRDDRNSALWLDSRGVPEWVDELLAELDERQAARREQRVAER 209

Query: 167 ------------------KDL--WKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEP-LW 283
                             ++L  W++  ++P +W+DNR  K S++ PDF  +D     LW
Sbjct: 210 AAGGGDERQEGGGGRRGAEELANWESLRANPIEWYDNRSRKTSDRQPDFVRRDDRRAALW 269

Query: 284 IKGIKTPSWVAPMLNNLKDEAFA-------------ASPSIEG-------SWDSFFSDPS 403
           +     P WV  +L  L   A A             ++P +E        +W+S  ++P 
Sbjct: 270 LDSRGAPPWVGDLLAELDAAAQARRQQRQAERSAAPSTPELEAKRAAEAANWESLRANPE 329

Query: 404 KWFDYRKTKKTNKHPDFK 457
            WFD R  K+T K PDF+
Sbjct: 330 AWFDNRNNKQTPKSPDFR 347



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 52/203 (25%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDF-KCISTGEALWLEGKTTPTWVAPMLNKLHEAAF---------- 148
           +W+D+R  K + K PDF +      ALW++G+  PTWV  +L+ L               
Sbjct: 56  EWYDNRTRKTNPKAPDFVRKDDRAVALWIDGRDVPTWVEELLHDLDSRQVNRRQQRDSES 115

Query: 149 ----------------ATSPSKKDLWKTFFSDPSKWFDNRKIKKSNKHPDF-KHKDTHEP 277
                               ++   W+   S+P +W+DNR  K S++ PDF +  D +  
Sbjct: 116 GDERGGRGERRSGPGGGRQAAEAANWEALRSNPDEWYDNRNRKTSDRQPDFVRRDDRNSA 175

Query: 278 LWIKGIKTPSWVAPMLNNLKD------EAFAASPSIEG------------------SWDS 385
           LW+     P WV  +L  L +      E   A  +  G                  +W+S
Sbjct: 176 LWLDSRGVPEWVDELLAELDERQAARREQRVAERAAGGGDERQEGGGGRRGAEELANWES 235

Query: 386 FFSDPSKWFDYRKTKKTNKHPDF 454
             ++P +W+D R  K +++ PDF
Sbjct: 236 LRANPIEWYDNRSRKTSDRQPDF 258



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 22/133 (16%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDF-KCISTGEALWLEGKTTPTWVAPMLNKLHEAAFA--------- 151
           +W+D+R  K S + PDF +      ALWL+ +  P WV  +L +L  AA A         
Sbjct: 242 EWYDNRSRKTSDRQPDFVRRDDRRAALWLDSRGAPPWVGDLLAELDAAAQARRQQRQAER 301

Query: 152 -TSPSKKDL----------WKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTH-EPLWIKGI 295
             +PS  +L          W++  ++P  WFDNR  K++ K PDF+ KD   + LW+   
Sbjct: 302 SAAPSTPELEAKRAAEAANWESLRANPEAWFDNRNNKQTPKSPDFRKKDDRTQALWVTSY 361

Query: 296 KTPSWVAPMLNNL 334
             P W+  +L+ L
Sbjct: 362 GAPEWLNELLSEL 374



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 29/147 (19%)
 Frame = +2

Query: 101 PTWVAPMLNKLHEAAFATSPSKKDL--WKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHE 274
           P  +AP + +  E     S   + L  W+   S+P +W+DNR  K + K PDF  KD   
Sbjct: 20  PVRLAPAVLRTREVRVMWSKRDETLANWEQLRSNPDEWYDNRTRKTNPKAPDFVRKDDRA 79

Query: 275 -PLWIKGIKTPSWVAPMLNNLK---------------DEAFAASPSIEG----------- 373
             LWI G   P+WV  +L++L                DE         G           
Sbjct: 80  VALWIDGRDVPTWVEELLHDLDSRQVNRRQQRDSESGDERGGRGERRSGPGGGRQAAEAA 139

Query: 374 SWDSFFSDPSKWFDYRKTKKTNKHPDF 454
           +W++  S+P +W+D R  K +++ PDF
Sbjct: 140 NWEALRSNPDEWYDNRNRKTSDRQPDF 166


>ref|XP_002953456.1| hypothetical protein VOLCADRAFT_82305 [Volvox carteri f.
           nagariensis] gi|300261215|gb|EFJ45429.1| hypothetical
           protein VOLCADRAFT_82305 [Volvox carteri f. nagariensis]
          Length = 413

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 54/195 (27%), Positives = 80/195 (41%), Gaps = 43/195 (22%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDF-KCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATS------- 157
           +W+D+RK K + K PDF +      A+W++G+ TP W    L++L               
Sbjct: 53  EWYDNRKRKTNPKAPDFVRKDDRSVAIWIDGRDTPGWYEEFLDELDSRQGGQQRGDRFGG 112

Query: 158 -----------PSKKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHE-PLWIKGIKT 301
                       ++   W++  ++P +WFDNR  K + + PDF+ KD     LWI     
Sbjct: 113 DRPGGDRNDRRAAEMANWESLRNNPEEWFDNRSRKTNPRAPDFRRKDDRAVALWIDSYGA 172

Query: 302 PSWVAPMLNNLKDEAFAASPSIE-----------------------GSWDSFFSDPSKWF 412
           P W+  +L+ L       S                             WDS  S+P  WF
Sbjct: 173 PEWLDDLLHELDARQSQRSSGYSQQQQGGYQQAPDQYVEDKRAAEMAKWDSLRSNPELWF 232

Query: 413 DYRKTKKTNKHPDFK 457
           D R+TK   K PDFK
Sbjct: 233 DNRRTKTNPKAPDFK 247



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 52/223 (23%), Positives = 85/223 (38%), Gaps = 71/223 (31%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCIST-GEALWLEGKTTPTWVAPMLNKL--------------H 136
           +WFD+R  K + + PDF+       ALW++    P W+  +L++L               
Sbjct: 139 EWFDNRSRKTNPRAPDFRRKDDRAVALWIDSYGAPEWLDDLLHELDARQSQRSSGYSQQQ 198

Query: 137 EAAFATSP---------SKKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHK-DTHEPLWI 286
           +  +  +P         ++   W +  S+P  WFDNR+ K + K PDFK K D    LW+
Sbjct: 199 QGGYQQAPDQYVEDKRAAEMAKWDSLRSNPELWFDNRRTKTNPKAPDFKLKSDRSVALWL 258

Query: 287 KGIKTPSWVAPMLNNL-------------------------------------------- 334
              + P ++  +L  L                                            
Sbjct: 259 SSYQLPDYLDDLLAELDARYDQRMNGQQQYYQQQQDYQPYPEQQQGYADYQQQQQPQQSY 318

Query: 335 --KDEAFAASPSIEGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
              D   A     + +W+S  ++P +WFD R TK+  K PDF+
Sbjct: 319 QQSDSREAKIAQEQANWESLRNNPEQWFDNRYTKQNPKAPDFR 361



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 19/113 (16%)
 Frame = +2

Query: 176 WKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHE-PLWIKGIKTPSWVAPMLNNL------ 334
           W    ++P++W+DNRK K + K PDF  KD     +WI G  TP W    L+ L      
Sbjct: 44  WDALRANPNEWYDNRKRKTNPKAPDFVRKDDRSVAIWIDGRDTPGWYEEFLDELDSRQGG 103

Query: 335 --KDEAFAAS----------PSIEGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
             + + F              +   +W+S  ++P +WFD R  K   + PDF+
Sbjct: 104 QQRGDRFGGDRPGGDRNDRRAAEMANWESLRNNPEEWFDNRSRKTNPRAPDFR 156


>ref|XP_006393529.1| hypothetical protein EUTSA_v10011640mg [Eutrema salsugineum]
           gi|557090107|gb|ESQ30815.1| hypothetical protein
           EUTSA_v10011640mg [Eutrema salsugineum]
          Length = 329

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 47/111 (42%), Positives = 63/111 (56%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKKDLWK 181
           +W+D R+ KK+ K PDFK   T EA WL G  TP WV   L    +        + D+  
Sbjct: 207 EWWDKRRNKKNPKQPDFKHKDTNEAFWL-GSDTPVWVTRQLELFDQ-------KRPDV-- 256

Query: 182 TFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNL 334
            FF++P +W+DNR+ K + + PDFKHKDT E LW+    TP WV+  L  L
Sbjct: 257 -FFANPQEWWDNRRDKLNPRWPDFKHKDTGEALWLHS-DTPVWVSRQLELL 305



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = +2

Query: 161 SKKD---LWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNN 331
           SK D   LW  FF++P +W+D R+ KK+ K PDFKHKDT+E  W+ G  TP WV   L  
Sbjct: 190 SKNDEIHLWNAFFANPDEWWDKRRNKKNPKQPDFKHKDTNEAFWL-GSDTPVWVTRQL-E 247

Query: 332 LKDEAFAASPSIEGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
           L D+            D FF++P +W+D R+ K   + PDFK
Sbjct: 248 LFDQKRP---------DVFFANPQEWWDNRRDKLNPRWPDFK 280


>ref|XP_002510278.1| conserved hypothetical protein [Ricinus communis]
           gi|223550979|gb|EEF52465.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 378

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 48/124 (38%), Positives = 64/124 (51%), Gaps = 13/124 (10%)
 Frame = +2

Query: 2   KWFDDRKLKKSSKYPDFKCISTGEALWLEGKTTPTWVAPML-------------NKLHEA 142
           +W+D RK K++ + PDFK    GE LWL     P WV   L             N + ++
Sbjct: 231 EWWDKRKSKQNPELPDFKHKYNGENLWLR-PDDPPWVKRHLQLLDMEIAKQRQANGVGKS 289

Query: 143 AFATSPSKKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPM 322
                 ++  LW+ FFS+P +W+DNRK K + + PDFKHKDT E LWI     P WV   
Sbjct: 290 GMMRYSNRHHLWQVFFSNPHEWWDNRKNKTNRRSPDFKHKDTGEALWIMR-DDPPWVKRQ 348

Query: 323 LNNL 334
           L  L
Sbjct: 349 LKLL 352



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
 Frame = +2

Query: 161 SKKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKD 340
           ++ DLW+ FF  P +W+D RK K++ + PDFKHK   E LW++    P WV   L  L D
Sbjct: 217 NRLDLWQLFFCKPCEWWDKRKSKQNPELPDFKHKYNGENLWLRP-DDPPWVKRHL-QLLD 274

Query: 341 EAFAASPSIEG--------------SWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
              A      G               W  FFS+P +W+D RK K   + PDFK
Sbjct: 275 MEIAKQRQANGVGKSGMMRYSNRHHLWQVFFSNPHEWWDNRKNKTNRRSPDFK 327


>ref|XP_006361790.1| PREDICTED: protein OSB2, chloroplastic-like [Solanum tuberosum]
          Length = 387

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
 Frame = +2

Query: 2   KWFDDRKLKKS----SKYPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKK 169
           +W+D RK K      +++PDFK   +  +LW+E   TP WV   L  L   A+A  P  K
Sbjct: 263 QWWDCRKAKLDGIVKARHPDFKKKDSSTSLWIEN--TPRWVLEGLEGLEFDAYA--PKSK 318

Query: 170 ------DLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNN 331
                 D WK    +P KW+DNR  K + K PDFKHK+T   LW+    +P WV   L  
Sbjct: 319 SIGKDVDSWKDLLENPDKWWDNRASKLNQKAPDFKHKNTGIGLWVG--SSPDWVLSQLPP 376

Query: 332 LKDEAFAAS 358
           L+D+  A+S
Sbjct: 377 LRDQRAASS 385



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
 Frame = +2

Query: 170 DLWKTFFSDPSKWFDNRKIKKSN----KHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLK 337
           D W+    +P +W+D RK K       +HPDFK KD+   LWI+   TP WV   L  L+
Sbjct: 252 DDWRDLIKNPKQWWDCRKAKLDGIVKARHPDFKKKDSSTSLWIEN--TPRWVLEGLEGLE 309

Query: 338 DEAFAASPSIEG----SWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
            +A+A      G    SW     +P KW+D R +K   K PDFK
Sbjct: 310 FDAYAPKSKSIGKDVDSWKDLLENPDKWWDNRASKLNQKAPDFK 353


>ref|XP_004246681.1| PREDICTED: protein OSB2, chloroplastic-like [Solanum lycopersicum]
          Length = 387

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
 Frame = +2

Query: 2   KWFDDRKLKKS----SKYPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPS-- 163
           +W+D RK K      +++PDFK   +  +LW+E    P WV   L  L   A+A  P   
Sbjct: 263 QWWDCRKAKLDGIVKARHPDFKKKDSSTSLWIEN--APRWVLEGLEGLEFDAYAPKPKGI 320

Query: 164 --KKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLK 337
               D WK    +P KW+DNR  K + K PDFKHK+T   LW+    +P WV   L  L+
Sbjct: 321 GKDVDCWKDLLENPDKWWDNRVSKLNQKAPDFKHKNTGIGLWVG--SSPDWVLSRLPPLR 378

Query: 338 DEAFAAS 358
           D+  A+S
Sbjct: 379 DQRAASS 385



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/104 (36%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
 Frame = +2

Query: 170 DLWKTFFSDPSKWFDNRKIKKSN----KHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLK 337
           D W+    +  +W+D RK K       +HPDFK KD+   LWI+    P WV   L  L+
Sbjct: 252 DDWRDLIKNSKQWWDCRKAKLDGIVKARHPDFKKKDSSTSLWIEN--APRWVLEGLEGLE 309

Query: 338 DEAFAASPSIEGS----WDSFFSDPSKWFDYRKTKKTNKHPDFK 457
            +A+A  P   G     W     +P KW+D R +K   K PDFK
Sbjct: 310 FDAYAPKPKGIGKDVDCWKDLLENPDKWWDNRVSKLNQKAPDFK 353


>gb|AAX34397.1| mitochondrial SBP40 [Solanum tuberosum]
          Length = 387

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
 Frame = +2

Query: 2   KWFDDRKLKKS----SKYPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSKK 169
           +W+D RK K      +++PDFK   +  +LW+E   TP WV   L  L   A+A  P  K
Sbjct: 263 QWWDCRKAKLDGIVKARHPDFKKKDSSTSLWIEN--TPRWVLEGLEGLEFDAYA--PKSK 318

Query: 170 ------DLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNN 331
                 D WK    +P KW+DNR  K + K PDFKHK+T   LW+    +P WV   L  
Sbjct: 319 SIGKDVDSWKDLLENPDKWWDNRASKLNQKAPDFKHKNTGIGLWVG--SSPDWVLSQLPP 376

Query: 332 LKDEAFAAS 358
           L+D+  A+S
Sbjct: 377 LRDQRAASS 385



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
 Frame = +2

Query: 179 KTFFSDPSKWFDNRKIKKSN----KHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKDEA 346
           +    +P +W+D RK K       +HPDFK KD+   LWI+   TP WV   L  L+ +A
Sbjct: 255 RDLIKNPKQWWDCRKAKLDGIVKARHPDFKKKDSSTSLWIEN--TPRWVLEGLEGLEFDA 312

Query: 347 FAASPSIEG----SWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
           +A      G    SW     +P KW+D R +K   K PDFK
Sbjct: 313 YAPKSKSIGKDVDSWKDLLENPDKWWDNRASKLNQKAPDFK 353


>ref|XP_003633203.1| PREDICTED: protein OSB2, chloroplastic-like [Vitis vinifera]
          Length = 137

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
 Frame = +2

Query: 2   KWFDDRKLKKSS----KYPDFKCISTGEALWLEGKTTPTWVAPML------NKLHEAAFA 151
           +W D+R+ K +     K+PDFK    G  LWL+  + P WV+  L      N+ H+  + 
Sbjct: 5   QWRDNRQDKLNGSVKPKFPDFKRKDDGVPLWLD--SAPEWVSSKLEGLEFDNQTHKTKYL 62

Query: 152 TSPSKKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNN 331
              +  + WK    +P KW+DNR  K   K PDFKHKDT E LW+    +P+WV   L  
Sbjct: 63  KRNTGDESWKNLVENPDKWWDNRSSKTKEKAPDFKHKDTGEALWLS--SSPAWVLSKLPP 120

Query: 332 LK 337
           +K
Sbjct: 121 IK 122



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
 Frame = +2

Query: 194 DPSKWFDNRKIKKSN----KHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKDE------ 343
           +P +W DNR+ K +     K PDFK KD   PLW+     P WV+  L  L+ +      
Sbjct: 2   NPKQWRDNRQDKLNGSVKPKFPDFKRKDDGVPLWLDS--APEWVSSKLEGLEFDNQTHKT 59

Query: 344 AFAASPSIEGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
            +    + + SW +   +P KW+D R +K   K PDFK
Sbjct: 60  KYLKRNTGDESWKNLVENPDKWWDNRSSKTKEKAPDFK 97


>emb|CBI17867.3| unnamed protein product [Vitis vinifera]
          Length = 211

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
 Frame = +2

Query: 2   KWFDDRKLKKSS----KYPDFKCISTGEALWLEGKTTPTWVAPML------NKLHEAAFA 151
           +W D+R+ K +     K+PDFK    G  LWL+  + P WV+  L      N+ H+  + 
Sbjct: 79  QWRDNRQDKLNGSVKPKFPDFKRKDDGVPLWLD--SAPEWVSSKLEGLEFDNQTHKTKYL 136

Query: 152 TSPSKKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNN 331
              +  + WK    +P KW+DNR  K   K PDFKHKDT E LW+    +P+WV   L  
Sbjct: 137 KRNTGDESWKNLVENPDKWWDNRSSKTKEKAPDFKHKDTGEALWLS--SSPAWVLSKLPP 194

Query: 332 LK 337
           +K
Sbjct: 195 IK 196



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
 Frame = +2

Query: 173 LWKTFFSDPSKWFDNRKIKKSN----KHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKD 340
           LW+    +P +W DNR+ K +     K PDFK KD   PLW+     P WV+  L  L+ 
Sbjct: 69  LWRDLIMNPKQWRDNRQDKLNGSVKPKFPDFKRKDDGVPLWLDS--APEWVSSKLEGLEF 126

Query: 341 E------AFAASPSIEGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
           +       +    + + SW +   +P KW+D R +K   K PDFK
Sbjct: 127 DNQTHKTKYLKRNTGDESWKNLVENPDKWWDNRSSKTKEKAPDFK 171


>ref|XP_002330744.1| predicted protein [Populus trichocarpa]
          Length = 354

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 10/118 (8%)
 Frame = +2

Query: 2   KWFDDRKLKKSS----KYPDFKCISTGEALWLEGKTTPTWVAPMLNKLHEAAFATSPSK- 166
           +W+D R  K+S     K+PDFK  +  +++WL G   P+W+   L K+        P++ 
Sbjct: 217 QWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWLTG--APSWIFSGLEKVKFDVKTALPTQT 274

Query: 167 -----KDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPML 325
                ++ WK    +P KW+DNR  KK+ K PDFKHK+T E LW+    +P+WV P L
Sbjct: 275 KQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLD--TSPAWVLPKL 330



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
 Frame = +2

Query: 161 SKKDLWKTFFSDPSKWFDNRKIKKSN----KHPDFKHKDTHEPLWIKGIKTPSWVAPMLN 328
           S  + W     +P++W+D R  K+S     KHPDFKHK+ ++ +W+ G   PSW+   L 
Sbjct: 203 SGSNSWTDLLENPNQWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWLTG--APSWIFSGLE 260

Query: 329 NLKDEAFAASPSI------EGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
            +K +   A P+       E  W     +P KW+D R  KK  K PDFK
Sbjct: 261 KVKFDVKTALPTQTKQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFK 309


>gb|ESW24981.1| hypothetical protein PHAVU_004G177000g [Phaseolus vulgaris]
           gi|561026297|gb|ESW24982.1| hypothetical protein
           PHAVU_004G177000g [Phaseolus vulgaris]
          Length = 353

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 49/123 (39%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
 Frame = +2

Query: 2   KWFDDRKLKKSS----KYPDFKCISTGEALWLEGKTTPTWVAPMLNKLH-EAAFATSPSK 166
           +WFD R  K++     KYPDFK      +LWL   T  TWV P L  L  +       + 
Sbjct: 220 QWFDFRDSKQNGLVNPKYPDFKRKDGTGSLWLN--TATTWVLPKLKGLEFDVPVVKCKNA 277

Query: 167 KD------LWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLN 328
           KD       W     +P+KW+DNR  K++ K PDFKHKDT E LW+    +PSWV   L 
Sbjct: 278 KDGKGGEVSWNDLVQNPAKWWDNRLDKRNEKAPDFKHKDTGEGLWLD--SSPSWVLAKLP 335

Query: 329 NLK 337
            +K
Sbjct: 336 PVK 338



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 44/143 (30%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
 Frame = +2

Query: 95  TTPTWVAPMLNKL---------HEAAFATS--PSKKDLWKTFFSDPSKWFDNRKIKKSN- 238
           +TP WV   L  +         H  + A     S    W     +P +WFD R  K++  
Sbjct: 173 STPKWVQEKLELVTIDQKPEPKHPISIAKKNPDSSMSSWIDLLDNPKQWFDFRDSKQNGL 232

Query: 239 ---KHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLKDEAFAAS-------PSIEGSWDSF 388
              K+PDFK KD    LW+    T  WV P L  L+ +               E SW+  
Sbjct: 233 VNPKYPDFKRKDGTGSLWLNTATT--WVLPKLKGLEFDVPVVKCKNAKDGKGGEVSWNDL 290

Query: 389 FSDPSKWFDYRKTKKTNKHPDFK 457
             +P+KW+D R  K+  K PDFK
Sbjct: 291 VQNPAKWWDNRLDKRNEKAPDFK 313


>ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidopsis thaliana]
           gi|332658861|gb|AEE84261.1| plastid transcriptionally
           active 9 [Arabidopsis thaliana]
          Length = 371

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
 Frame = +2

Query: 2   KWFDDRKLKKSS----KYPDFKCISTGEALWLEGKTTPTWVAPMLNKLH------EAAFA 151
           +W+D R+ K +     ++PDFK   +  +LWL     P WV P L  L       +A   
Sbjct: 246 EWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLN--KAPNWVLPKLEGLEFDVLVPKARVV 303

Query: 152 TSPSKKDLWKTFFSDPSKWFDNRKIKKSNKHPDFKHKDTHEPLWIKGIKTPSWVAPMLNN 331
                ++ WK    +P KW+DNR  K++ K PDFKHK+T E LW+   ++P+WV P L  
Sbjct: 304 KQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKLPP 361

Query: 332 LK 337
           +K
Sbjct: 362 VK 363



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
 Frame = +2

Query: 170 DLWKTFFSDPSKWFDNRKIKKSN----KHPDFKHKDTHEPLWIKGIKTPSWVAPMLNNLK 337
           D W     +P +W+D+R+ K +     +HPDFK KD+   LW+   K P+WV P L  L+
Sbjct: 235 DSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLN--KAPNWVLPKLEGLE 292

Query: 338 DEAFAASPSI------EGSWDSFFSDPSKWFDYRKTKKTNKHPDFK 457
            +       +      E SW     +P KW+D R  K+  K PDFK
Sbjct: 293 FDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFK 338