BLASTX nr result

ID: Ephedra28_contig00013503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00013503
         (617 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869260.1| nucleic acid binding protein [Arabidopsis ly...    57   5e-06
ref|NP_001154281.1| Enhancer of polycomb-like transcription fact...    56   9e-06
ref|NP_194988.2| Enhancer of polycomb-like transcription factor ...    56   9e-06
emb|CAA18599.1| putative protein [Arabidopsis thaliana] gi|72701...    56   9e-06

>ref|XP_002869260.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315096|gb|EFH45519.1| nucleic acid binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1550

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 21/46 (45%), Positives = 30/46 (65%)
 Frame = +2

Query: 473 RDERMFKDYAYKDADSHHVVGKRVKIFWPLDDAWYEGVVHSFDSKK 610
           R  R F +  + D DSH ++ K++K+FWPLD++WY G V  FD  K
Sbjct: 338 RKRRHFYEILFSDVDSHWLLNKKIKVFWPLDESWYHGFVDGFDGDK 383


>ref|NP_001154281.1| Enhancer of polycomb-like transcription factor protein [Arabidopsis
           thaliana] gi|332660691|gb|AEE86091.1| Enhancer of
           polycomb-like transcription factor protein [Arabidopsis
           thaliana]
          Length = 1540

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 21/46 (45%), Positives = 29/46 (63%)
 Frame = +2

Query: 473 RDERMFKDYAYKDADSHHVVGKRVKIFWPLDDAWYEGVVHSFDSKK 610
           R  R F +  + D DSH ++ K++K+FWPLD+ WY G V  FD  K
Sbjct: 337 RKRRHFYEILFSDVDSHWLLNKKIKVFWPLDERWYHGFVDGFDGDK 382


>ref|NP_194988.2| Enhancer of polycomb-like transcription factor protein [Arabidopsis
           thaliana] gi|332660690|gb|AEE86090.1| Enhancer of
           polycomb-like transcription factor protein [Arabidopsis
           thaliana]
          Length = 1539

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 21/46 (45%), Positives = 29/46 (63%)
 Frame = +2

Query: 473 RDERMFKDYAYKDADSHHVVGKRVKIFWPLDDAWYEGVVHSFDSKK 610
           R  R F +  + D DSH ++ K++K+FWPLD+ WY G V  FD  K
Sbjct: 337 RKRRHFYEILFSDVDSHWLLNKKIKVFWPLDERWYHGFVDGFDGDK 382


>emb|CAA18599.1| putative protein [Arabidopsis thaliana] gi|7270166|emb|CAB79979.1|
           putative protein [Arabidopsis thaliana]
          Length = 1544

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 21/46 (45%), Positives = 29/46 (63%)
 Frame = +2

Query: 473 RDERMFKDYAYKDADSHHVVGKRVKIFWPLDDAWYEGVVHSFDSKK 610
           R  R F +  + D DSH ++ K++K+FWPLD+ WY G V  FD  K
Sbjct: 342 RKRRHFYEILFSDVDSHWLLNKKIKVFWPLDERWYHGFVDGFDGDK 387


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