BLASTX nr result
ID: Ephedra28_contig00013395
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00013395
(613 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBA18493.1| replication associated protein [Ageratum enation... 166 6e-39
ref|YP_031730.1| replication associated protein [Nanovirus-like ... 164 2e-38
ref|YP_003433566.1| replication protein [Cotton leaf curl Burewa... 164 2e-38
emb|CAJ85968.1| replication protein [Malvastrum yellow mosaic al... 162 5e-38
emb|CAJ85970.1| replication protein [Malvastrum yellow mosaic al... 162 5e-38
gb|AGH20698.1| replication associated protein [Cotton leaf curl ... 162 7e-38
emb|CAD56271.1| replication associated protein [Nanovirus-like p... 162 7e-38
ref|YP_004046695.1| replication associated protein [Tomato leaf ... 162 7e-38
emb|CBL51935.1| replication associated protein [Nanovirus-like p... 162 7e-38
gb|ADF80162.1| rep [Cotton leaf curl Burewala alphasatellite] gi... 162 7e-38
emb|CBK44087.1| Rep protein [Tobacco curly shoot alphasatellite] 162 7e-38
emb|CBJ19310.1| replication protein [Cotton leaf curl Burewala a... 162 7e-38
gb|ABL63379.1| replication-associated protein [Nanovirus-like pa... 162 7e-38
ref|YP_007011042.1| replication associated protein [Tomato leaf ... 162 9e-38
gb|ADF80163.1| rep [Cotton leaf curl Burewala alphasatellite] 162 9e-38
emb|CBK44088.1| Rep protein [Tobacco curly shoot alphasatellite] 162 9e-38
ref|YP_851014.1| replication protein [Malvastrum yellow mosaic a... 162 9e-38
emb|CAJ85971.1| replication protein [Malvastrum yellow mosaic al... 162 9e-38
emb|CBL51922.1| replication associated protein [Nanovirus-like p... 161 1e-37
ref|YP_425036.1| replication protein [Sida leaf curl virus-assoc... 161 1e-37
>emb|CBA18493.1| replication associated protein [Ageratum enation virus associated
DNA 1]
Length = 315
Score = 166 bits (419), Expect = 6e-39
Identities = 87/194 (44%), Positives = 123/194 (63%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A E+F K+ KEI + + WQ + +L+
Sbjct: 114 KRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEDFQKTAKEIQISNLKSWQSRLKTLLER 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR IIWVYGP G EGK+ +ARDL RDG WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIIWVYGPIGGEGKSTFARDLYRDGSWFYTRGGSADNVSYQYIGCLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N +PDF+KIS DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDFEKISNDRVHVIP 293
Query: 558 A*GCGLTINPRINK 599
CG+ + I++
Sbjct: 294 CIPCGVCLKHHIHE 307
>ref|YP_031730.1| replication associated protein [Nanovirus-like particle]
gi|49256765|emb|CAD56267.1| replication associated
protein [Nanovirus-like particle]
Length = 315
Score = 164 bits (414), Expect = 2e-38
Identities = 86/188 (45%), Positives = 119/188 (63%), Gaps = 5/188 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R V RSP RM E+PS +RRV + A EEF KS EI + + WQ + +L+
Sbjct: 114 KRRQRELVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAHEIQISNLKSWQSRLKTLLER 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR I+WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTILWVYGPNGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIGCLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK+ + Y IE+ K+R++ NK + LN I V+VM+N +PDF+KIS+DRV +I
Sbjct: 234 RDKKEYLQYSLIEMFKDRLIVSNKYEPLMAPLLNCIHVVVMSNFLPDFEKISQDRVHVIP 293
Query: 558 A*GCGLTI 581
CG+ +
Sbjct: 294 CIPCGVCL 301
>ref|YP_003433566.1| replication protein [Cotton leaf curl Burewala alphasatellite]
gi|288558358|emb|CBJ19309.1| replication protein [Cotton
leaf curl Burewala alphasatellite]
Length = 315
Score = 164 bits (414), Expect = 2e-38
Identities = 85/194 (43%), Positives = 121/194 (62%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A EEF K+ KEI + + WQ + +L+
Sbjct: 114 KRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAKEIQISNLKSWQSRLKTLLER 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR I WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIGCLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N+I V+VM+N +PDF+KIS DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINSIHVVVMSNFLPDFEKISVDRVHVIP 293
Query: 558 A*GCGLTINPRINK 599
CG+ + + +
Sbjct: 294 CIPCGVCLKHHVGE 307
>emb|CAJ85968.1| replication protein [Malvastrum yellow mosaic alphasatellite]
Length = 315
Score = 162 bits (411), Expect = 5e-38
Identities = 85/188 (45%), Positives = 119/188 (63%), Gaps = 5/188 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITVY--RKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A E+F K+ +EI + + WQ +N+L+
Sbjct: 114 KRRQRESVIRSPVRMAEENPSLFRRVKAKIAEEDFQKTTREIEILNLKSWQLRLNTLLER 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
PDDR I WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 APDDRTIFWVYGPTGGEGKSTFARDLYRSGTWFYTRGGSADNVSYQYIGQLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N MPDF+KIS+DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFMPDFEKISQDRVHVIP 293
Query: 558 A*GCGLTI 581
CG+ +
Sbjct: 294 CRPCGVCL 301
>emb|CAJ85970.1| replication protein [Malvastrum yellow mosaic alphasatellite]
Length = 315
Score = 162 bits (411), Expect = 5e-38
Identities = 85/188 (45%), Positives = 119/188 (63%), Gaps = 5/188 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITVY--RKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A E+F K+ +EI + + WQ +N+L+
Sbjct: 114 KRRQRESVIRSPVRMAEENPSLFRRVKAKIAEEDFQKTTREIEILNLKSWQLRLNTLLER 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
PDDR I WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 APDDRTIFWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIGQLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N MPDF+KIS+DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFMPDFEKISQDRVHVIP 293
Query: 558 A*GCGLTI 581
CG+ +
Sbjct: 294 CRPCGVCL 301
>gb|AGH20698.1| replication associated protein [Cotton leaf curl Burewala
alphasatellite]
Length = 315
Score = 162 bits (410), Expect = 7e-38
Identities = 85/194 (43%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A EEF K+ KEI + + WQ + +L+
Sbjct: 114 KRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAKEIQISNLKSWQSRLKTLLER 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR I WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIGCLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N +PDF+KIS DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDFEKISVDRVHVIP 293
Query: 558 A*GCGLTINPRINK 599
CG+ + + +
Sbjct: 294 CIPCGVCLKHHVGE 307
>emb|CAD56271.1| replication associated protein [Nanovirus-like particle]
Length = 315
Score = 162 bits (410), Expect = 7e-38
Identities = 87/194 (44%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A EEF KS EI + + WQ + +L+
Sbjct: 114 KRRQRESVIRSPVRMAEENPSVFRRVKTKIAEEEFQKSASEIQISNLKSWQLRLKTLLDR 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR IIWVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIIWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIGCLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N +PDF+KIS DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDFEKISSDRVHVIP 293
Query: 558 A*GCGLTINPRINK 599
CG+ + I +
Sbjct: 294 CIPCGVCLKHHIGE 307
>ref|YP_004046695.1| replication associated protein [Tomato leaf curl Cameroon
alphasatellite] gi|313192303|emb|CBX51429.1| replication
associated protein [Tomato leaf curl Cameroon
alphasatellite]
Length = 315
Score = 162 bits (410), Expect = 7e-38
Identities = 86/188 (45%), Positives = 116/188 (61%), Gaps = 5/188 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R AVERSP RM E+PS +RRV + A EEF KS EI + + WQ + L+
Sbjct: 114 KRRQREAVERSPVRMSEENPSVFRRVKAKIAEEEFQKSAPEIQISNLKSWQLRLKQLLSR 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR I WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIFWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIGCLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y +E+ K+R++ NK + LN I V+VM+N +PD +KIS DRV +I
Sbjct: 234 RDKKDYLQYSLVEMFKDRLVVSNKYEPIMAPMLNCIHVVVMSNFLPDMEKISSDRVHVIP 293
Query: 558 A*GCGLTI 581
CG+ +
Sbjct: 294 CIPCGVCL 301
>emb|CBL51935.1| replication associated protein [Nanovirus-like particle]
Length = 315
Score = 162 bits (410), Expect = 7e-38
Identities = 87/194 (44%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R V RSP RM E+PS +RRV + A EEF KS EI + + WQ + +L+
Sbjct: 114 KRRQREIVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAHEIQISNLKSWQLRLKTLLDR 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR IIWVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIIWVYGPIGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIGQLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N +PDF+KIS DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDFEKISNDRVHVIP 293
Query: 558 A*GCGLTINPRINK 599
CG+ + I++
Sbjct: 294 CIPCGVCLKHHIHE 307
>gb|ADF80162.1| rep [Cotton leaf curl Burewala alphasatellite]
gi|295410274|gb|ADG04779.1| replication protein [Cotton
leaf curl Burewala alphasatellite]
gi|326787487|gb|AEA07710.1| replicase [Cotton leaf curl
Burewala alphasatellite] gi|339649141|gb|AEJ87200.1|
replication protein [Cotton leaf curl Burewala
alphasatellite] gi|462078873|gb|AGH20699.1| replication
associated protein [Cotton leaf curl Burewala
alphasatellite] gi|563427366|gb|AHB60217.1| replication
associated protein [Cotton leaf curl alphasatellite]
Length = 315
Score = 162 bits (410), Expect = 7e-38
Identities = 85/194 (43%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A EEF K+ KEI + + WQ + +L+
Sbjct: 114 KRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAKEIQISNLKSWQSRLKTLLER 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR I WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIGCLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N +PDF+KIS DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDFEKISVDRVHVIP 293
Query: 558 A*GCGLTINPRINK 599
CG+ + + +
Sbjct: 294 CIPCGVCLKHHVGE 307
>emb|CBK44087.1| Rep protein [Tobacco curly shoot alphasatellite]
Length = 315
Score = 162 bits (410), Expect = 7e-38
Identities = 87/194 (44%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R V RSP RM E+PS +RRV + A EEF KS EI + + WQ + +L+
Sbjct: 114 KRRQRELVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAHEIQISNLKSWQLRLKTLLDR 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR IIWVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIIWVYGPIGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIGQLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N +PDF+KIS DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDFEKISSDRVHVIP 293
Query: 558 A*GCGLTINPRINK 599
CG+ + I++
Sbjct: 294 CIPCGVCLKHHISE 307
>emb|CBJ19310.1| replication protein [Cotton leaf curl Burewala alphasatellite]
Length = 315
Score = 162 bits (410), Expect = 7e-38
Identities = 85/194 (43%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A EEF K+ KEI + + WQ + +L+
Sbjct: 114 KRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAKEIQISNLKSWQSRLKTLLER 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR I WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIGCLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N +PDF+KIS DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDFEKISVDRVHVIP 293
Query: 558 A*GCGLTINPRINK 599
CG+ + + +
Sbjct: 294 CIPCGVCLKHHVGE 307
>gb|ABL63379.1| replication-associated protein [Nanovirus-like particle]
Length = 225
Score = 162 bits (410), Expect = 7e-38
Identities = 85/194 (43%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A EEF K+ KEI + + WQ + +L+
Sbjct: 24 KRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAKEIQISNLKSWQSRLKTLLER 83
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR I WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 84 DPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIGCLGNNIVFDIP 143
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N +PDF+KIS DRV +I
Sbjct: 144 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDFEKISVDRVHVIP 203
Query: 558 A*GCGLTINPRINK 599
CG+ + + +
Sbjct: 204 CIPCGVCLKHHVGE 217
>ref|YP_007011042.1| replication associated protein [Tomato leaf curl Karnataka
alphasatellite] gi|411026019|gb|AFV99519.1| replication
associated protein [Tomato leaf curl Karnataka
alphasatellite]
Length = 315
Score = 162 bits (409), Expect = 9e-38
Identities = 87/194 (44%), Positives = 121/194 (62%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A EEF KS EI + + WQ + +L+
Sbjct: 114 KRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAFEIQISNLKSWQLRLKTLLDR 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR IIWVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIIWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIGCLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N +PDF+KIS DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDFEKISSDRVHVIP 293
Query: 558 A*GCGLTINPRINK 599
CG+ + I++
Sbjct: 294 CIPCGVCLKHHIHE 307
>gb|ADF80163.1| rep [Cotton leaf curl Burewala alphasatellite]
Length = 315
Score = 162 bits (409), Expect = 9e-38
Identities = 84/194 (43%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A EEF K+ KEI + + WQ + +L+
Sbjct: 114 KRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAKEIQISNLKSWQSRLKTLLER 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR I WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIGCLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N +PDF+KIS DRV ++
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDFEKISVDRVHVVP 293
Query: 558 A*GCGLTINPRINK 599
CG+ + + +
Sbjct: 294 CIPCGVCLKHHVGE 307
>emb|CBK44088.1| Rep protein [Tobacco curly shoot alphasatellite]
Length = 315
Score = 162 bits (409), Expect = 9e-38
Identities = 86/194 (44%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R V RSP RM E+PS +RRV + A EEF KS EI + + WQ + +L+
Sbjct: 114 KRRQRELVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAHEIQISDLKSWQLRLKTLLDR 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR IIWVYGP G EGK+ +ARDL + G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIIWVYGPTGGEGKSTFARDLYKSGSWFYTRGGSADNVSYQYIGQLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N +PDF+KIS DRV +I
Sbjct: 234 RDKKDYLQYNLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDFEKISSDRVHVIP 293
Query: 558 A*GCGLTINPRINK 599
CG+ + I++
Sbjct: 294 CIPCGVCLKHHIDE 307
>ref|YP_851014.1| replication protein [Malvastrum yellow mosaic alphasatellite]
gi|116874754|emb|CAJ85967.1| replication protein
[Malvastrum yellow mosaic alphasatellite]
Length = 315
Score = 162 bits (409), Expect = 9e-38
Identities = 85/188 (45%), Positives = 119/188 (63%), Gaps = 5/188 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITVY--RKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A E+F K+ +EI + + WQ +N+L+
Sbjct: 114 KRRQRESVIRSPVRMAEENPSLFRRVKAKIAEEDFHKTTREIEILNLKSWQLRLNTLLER 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
PDDR I WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 APDDRTIFWVYGPTGGEGKSTFARDLYRSGTWFYTRGGSADNVSYQYIGQLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N MPDF+KIS+DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFMPDFEKISQDRVHVIP 293
Query: 558 A*GCGLTI 581
CG+ +
Sbjct: 294 CRPCGVCL 301
>emb|CAJ85971.1| replication protein [Malvastrum yellow mosaic alphasatellite]
Length = 315
Score = 162 bits (409), Expect = 9e-38
Identities = 86/188 (45%), Positives = 117/188 (62%), Gaps = 5/188 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R +V RSP RM E+PS +RRV + A EEF KS EI + + WQ + +L+
Sbjct: 114 KRRQRESVIRSPVRMAEENPSVFRRVKAKLAEEEFQKSATEIQISNLKSWQLRLRTLLER 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
PDDR I WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 VPDDRTIFWVYGPTGGEGKSTFARDLYRSGTWFYTRGGSADNVSYQYIGQLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N MPDF+KIS+DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFMPDFEKISQDRVHVIP 293
Query: 558 A*GCGLTI 581
CG+ +
Sbjct: 294 CRPCGVCL 301
>emb|CBL51922.1| replication associated protein [Nanovirus-like particle]
Length = 315
Score = 161 bits (408), Expect = 1e-37
Identities = 87/194 (44%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITV--YRKWQEAVNSLIVE 206
K +R V RSP RM E+PS +RRV + A EEF KS EI + + WQ + +L+
Sbjct: 114 KRRQREIVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAHEIQISNLKSWQLRLKTLLDR 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR IIWVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIIWVYGPIGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIGQLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N +PDF+KIS DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDFEKISMDRVHVIP 293
Query: 558 A*GCGLTINPRINK 599
CG+ + I++
Sbjct: 294 CIPCGVCLKHHIHE 307
>ref|YP_425036.1| replication protein [Sida leaf curl virus-associated DNA 1]
gi|83308075|emb|CAJ19260.1| replication protein [Sida
leaf curl virus-associated DNA 1]
Length = 315
Score = 161 bits (407), Expect = 1e-37
Identities = 85/188 (45%), Positives = 118/188 (62%), Gaps = 5/188 (2%)
Frame = +3
Query: 33 KSSERAAVERSPERMKLEHPSAYRRVICEKANEEFMKSPKEITVY--RKWQEAVNSLIVE 206
K +R V RSP RM E+PS +RRV + A EEF K+ +EI + + WQ + +L+
Sbjct: 114 KRRQRELVIRSPVRMAEENPSVFRRVKAKLAEEEFQKTAREIQILDLKSWQLRLKTLLDR 173
Query: 207 EPDDRKIIWVYGPKGAEGKTMYARDLVRDG-WFDTDGGAPASAMKRYLMDPARNVVFDIP 383
+PDDR I WVYGP G EGK+ +ARDL R G WF T GG+ + +Y+ N+VFDIP
Sbjct: 174 DPDDRTIFWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIGCLGNNIVFDIP 233
Query: 384 RCKKKRINYGFIEIMKERIMFGNKNRKFLE--LNNIQVIVMANVMPDFKKISEDRVVIIK 557
R KK + Y IE+ K+R++ NK + +N I V+VM+N MPDF+KIS+DRV +I
Sbjct: 234 RDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFMPDFEKISQDRVHVIP 293
Query: 558 A*GCGLTI 581
CG+ +
Sbjct: 294 CRPCGVCL 301