BLASTX nr result

ID: Ephedra28_contig00013380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00013380
         (773 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE42496.1| unnamed protein product [Mus musculus]                 68   3e-09
ref|XP_003944424.1| PREDICTED: LOW QUALITY PROTEIN: spliceosome ...    68   3e-09
dbj|BAG58660.1| unnamed protein product [Homo sapiens] gi|221046...    68   3e-09
dbj|BAG58508.1| unnamed protein product [Homo sapiens]                 68   3e-09
gb|EAX03412.1| hCG2005638, isoform CRA_d [Homo sapiens]                68   3e-09
dbj|BAD92454.1| HLA-B associated transcript 1 variant [Homo sapi...    68   3e-09
gb|EGV91150.1| Spliceosome RNA helicase Bat1 [Cricetulus griseus]      67   5e-09
gb|AFW82991.1| hypothetical protein ZEAMMB73_566534, partial [Ze...    67   7e-09
dbj|BAH57203.1| AT5G11170 [Arabidopsis thaliana]                       66   1e-08
dbj|BAD95431.1| DEAD BOX RNA helicase RH15 - like protein [Arabi...    66   1e-08
gb|AFW82994.1| hypothetical protein ZEAMMB73_566534 [Zea mays]         65   2e-08
gb|ADE76139.1| unknown [Picea sitchensis]                              65   2e-08
ref|NP_001170610.1| uncharacterized protein LOC100384654 [Zea ma...    65   2e-08
gb|EXB67307.1| DEAD-box ATP-dependent RNA helicase 56 [Morus not...    64   4e-08
ref|XP_006665192.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   4e-08
ref|XP_006644282.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   4e-08
ref|XP_006644281.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   4e-08
ref|XP_006578149.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   4e-08
ref|XP_006483351.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   4e-08
ref|XP_006361727.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   4e-08

>dbj|BAE42496.1| unnamed protein product [Mus musculus]
          Length = 324

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQDVNPLFP 110
           +MTPH+KQVMMFSATLSKEIRPVC++FMQDVN L P
Sbjct: 216 RMTPHEKQVMMFSATLSKEIRPVCRKFMQDVNTLLP 251


>ref|XP_003944424.1| PREDICTED: LOW QUALITY PROTEIN: spliceosome RNA helicase DDX39B
           [Saimiri boliviensis boliviensis]
          Length = 577

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQDVNPLFP 110
           +MTPH+KQVMMFSATLSKEIRPVC++FMQDVN L P
Sbjct: 216 RMTPHEKQVMMFSATLSKEIRPVCRKFMQDVNTLLP 251


>dbj|BAG58660.1| unnamed protein product [Homo sapiens] gi|221046326|dbj|BAH14840.1|
           unnamed protein product [Homo sapiens]
          Length = 212

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQDVNPLFP 110
           +MTPH+KQVMMFSATLSKEIRPVC++FMQDVN L P
Sbjct: 138 RMTPHEKQVMMFSATLSKEIRPVCRKFMQDVNTLLP 173


>dbj|BAG58508.1| unnamed protein product [Homo sapiens]
          Length = 243

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQDVNPLFP 110
           +MTPH+KQVMMFSATLSKEIRPVC++FMQDVN L P
Sbjct: 169 RMTPHEKQVMMFSATLSKEIRPVCRKFMQDVNTLLP 204


>gb|EAX03412.1| hCG2005638, isoform CRA_d [Homo sapiens]
          Length = 290

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQDVNPLFP 110
           +MTPH+KQVMMFSATLSKEIRPVC++FMQDVN L P
Sbjct: 216 RMTPHEKQVMMFSATLSKEIRPVCRKFMQDVNTLLP 251


>dbj|BAD92454.1| HLA-B associated transcript 1 variant [Homo sapiens]
          Length = 310

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQDVNPLFP 110
           +MTPH+KQVMMFSATLSKEIRPVC++FMQDVN L P
Sbjct: 236 RMTPHEKQVMMFSATLSKEIRPVCRKFMQDVNTLLP 271


>gb|EGV91150.1| Spliceosome RNA helicase Bat1 [Cricetulus griseus]
          Length = 103

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = +3

Query: 6   MTPHDKQVMMFSATLSKEIRPVCKRFMQDVNPLFP 110
           MTPH+KQVMMFSATLSKEIRPVC++FMQDVN L P
Sbjct: 1   MTPHEKQVMMFSATLSKEIRPVCRKFMQDVNTLLP 35


>gb|AFW82991.1| hypothetical protein ZEAMMB73_566534, partial [Zea mays]
          Length = 185

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQDV 95
           KMTPHDKQVMMFSATLSKEIRPVCKRFMQDV
Sbjct: 134 KMTPHDKQVMMFSATLSKEIRPVCKRFMQDV 164


>dbj|BAH57203.1| AT5G11170 [Arabidopsis thaliana]
          Length = 177

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQDV 95
           KMTPHDKQVMMFSATLSKEIRPVCK+FMQDV
Sbjct: 134 KMTPHDKQVMMFSATLSKEIRPVCKKFMQDV 164


>dbj|BAD95431.1| DEAD BOX RNA helicase RH15 - like protein [Arabidopsis thaliana]
          Length = 177

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQDV 95
           KMTPHDKQVMMFSATLSKEIRPVCK+FMQDV
Sbjct: 134 KMTPHDKQVMMFSATLSKEIRPVCKKFMQDV 164


>gb|AFW82994.1| hypothetical protein ZEAMMB73_566534 [Zea mays]
          Length = 446

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 92
           KMTPHDKQVMMFSATLSKEIRPVCKRFMQD
Sbjct: 237 KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 266


>gb|ADE76139.1| unknown [Picea sitchensis]
          Length = 427

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 92
           KMTPHDKQVMMFSATLSKEIRPVCKRFMQD
Sbjct: 217 KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 246


>ref|NP_001170610.1| uncharacterized protein LOC100384654 [Zea mays]
           gi|238006354|gb|ACR34212.1| unknown [Zea mays]
           gi|413950343|gb|AFW82992.1| hypothetical protein
           ZEAMMB73_566534 [Zea mays] gi|413950344|gb|AFW82993.1|
           hypothetical protein ZEAMMB73_566534 [Zea mays]
          Length = 427

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 92
           KMTPHDKQVMMFSATLSKEIRPVCKRFMQD
Sbjct: 218 KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 247


>gb|EXB67307.1| DEAD-box ATP-dependent RNA helicase 56 [Morus notabilis]
          Length = 525

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 92
           KMTPHDKQVMMFSATLSKEIRPVCK+FMQD
Sbjct: 252 KMTPHDKQVMMFSATLSKEIRPVCKKFMQD 281


>ref|XP_006665192.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like, partial
           [Oryza brachyantha]
          Length = 187

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 92
           KMTPHDKQVMMFSATLSKEIRPVCK+FMQD
Sbjct: 158 KMTPHDKQVMMFSATLSKEIRPVCKKFMQD 187


>ref|XP_006644282.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like [Oryza
           brachyantha]
          Length = 433

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 92
           KMTPHDKQVMMFSATLSKEIRPVCK+FMQD
Sbjct: 223 KMTPHDKQVMMFSATLSKEIRPVCKKFMQD 252


>ref|XP_006644281.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like [Oryza
           brachyantha]
          Length = 433

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 92
           KMTPHDKQVMMFSATLSKEIRPVCK+FMQD
Sbjct: 223 KMTPHDKQVMMFSATLSKEIRPVCKKFMQD 252


>ref|XP_006578149.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X2
           [Glycine max]
          Length = 344

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 92
           KMTPHDKQVMMFSATLSKEIRPVCK+FMQD
Sbjct: 134 KMTPHDKQVMMFSATLSKEIRPVCKKFMQD 163


>ref|XP_006483351.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Citrus
           sinensis]
          Length = 427

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 92
           KMTPHDKQVMMFSATLSKEIRPVCK+FMQD
Sbjct: 217 KMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246


>ref|XP_006361727.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like isoform X1
           [Solanum tuberosum] gi|565392063|ref|XP_006361728.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like
           isoform X2 [Solanum tuberosum]
          Length = 427

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   KMTPHDKQVMMFSATLSKEIRPVCKRFMQD 92
           KMTPHDKQVMMFSATLSKEIRPVCK+FMQD
Sbjct: 217 KMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246


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