BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00013336
         (1216 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006827799.1| hypothetical protein AMTR_s00009p00267190 [A...   346   1e-92
ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Sela...   339   2e-90
ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Sela...   332   2e-88
gb|EPS64699.1| hypothetical protein M569_10077, partial [Genlise...   329   1e-87
ref|XP_006466768.1| PREDICTED: splicing factor U2af large subuni...   327   6e-87
ref|XP_006466767.1| PREDICTED: splicing factor U2af large subuni...   327   6e-87
ref|XP_006466765.1| PREDICTED: splicing factor U2af large subuni...   327   6e-87
ref|XP_006466764.1| PREDICTED: splicing factor U2af large subuni...   327   6e-87
ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citr...   327   6e-87
ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citr...   327   6e-87
ref|XP_003598047.1| Splicing factor U2af large subunit B [Medica...   325   2e-86
ref|XP_003589450.1| Splicing factor U2af large subunit B [Medica...   325   2e-86
ref|XP_001765745.1| predicted protein [Physcomitrella patens] gi...   325   2e-86
ref|XP_006856065.1| hypothetical protein AMTR_s00059p00102910 [A...   324   4e-86
ref|XP_004233511.1| PREDICTED: splicing factor U2af large subuni...   324   5e-86
ref|XP_006353521.1| PREDICTED: splicing factor U2af large subuni...   323   9e-86
ref|XP_006353520.1| PREDICTED: splicing factor U2af large subuni...   323   9e-86
ref|XP_006353517.1| PREDICTED: splicing factor U2af large subuni...   323   9e-86
ref|XP_006346940.1| PREDICTED: splicing factor U2af large subuni...   323   1e-85
ref|XP_006346939.1| PREDICTED: splicing factor U2af large subuni...   323   1e-85

>ref|XP_006827799.1| hypothetical protein AMTR_s00009p00267190 [Amborella trichopoda]
            gi|548832419|gb|ERM95215.1| hypothetical protein
            AMTR_s00009p00267190 [Amborella trichopoda]
          Length = 491

 Score =  346 bits (888), Expect = 1e-92
 Identities = 175/257 (68%), Positives = 204/257 (79%), Gaps = 3/257 (1%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AAALGPSQPSP                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 232  AAALGPSQPSPHLTLAAVGLIPGAIGGAEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 291

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            FDLV+DRDTGNSKGY FCVYQDP VTDIACAALNGLKMGDKTLTVRRAT  TGQ KPDQ+
Sbjct: 292  FDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASTGQAKPDQE 351

Query: 857  IVLQQAQQHIAMQKLALQ--GSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDIL 684
            I+L QAQQHIA+QKL LQ  G+      +TV ENPTKV+CLT+VVS +EL DDEE+++IL
Sbjct: 352  IILAQAQQHIALQKLVLQAGGAAVPGVAVTVSENPTKVLCLTEVVSADELQDDEEYEEIL 411

Query: 683  DDMREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNS 504
            +DMREE  KFG +  + IPRPSP+G+  PG+GKVF+EY D  GA +A+ AL+GRKFGGN 
Sbjct: 412  EDMREEGRKFGPLTTVVIPRPSPDGQPTPGLGKVFLEYVDPAGAARARTALNGRKFGGNV 471

Query: 503  VVAVYFSEEKFSSGDYE 453
            V+AVY+ E+KFS+G+Y+
Sbjct: 472  VIAVYYPEDKFSNGEYD 488


>ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
            gi|300142484|gb|EFJ09184.1| hypothetical protein
            SELMODRAFT_160385 [Selaginella moellendorffii]
          Length = 421

 Score =  339 bits (869), Expect = 2e-90
 Identities = 175/263 (66%), Positives = 201/263 (76%), Gaps = 10/263 (3%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQPSP                  GPDR+FVGGLPYYLTE QI+ELLESFG LRG
Sbjct: 152  AATLGPSQPSPHLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEGQIKELLESFGPLRG 211

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV---TGQPKPD 864
            FDLV+DRDTGNSKGY FCVYQDP VTD+ACAALNGLKMGDKTLTVRRAT    +GQPKPD
Sbjct: 212  FDLVKDRDTGNSKGYGFCVYQDPAVTDVACAALNGLKMGDKTLTVRRATASVHSGQPKPD 271

Query: 863  QDIVLQQAQQHIAMQKLALQGS--VSSMYP-----LTVQENPTKVVCLTQVVSPEELGDD 705
            Q  VL QAQQ IA+QKLALQG+   + M P     +T+ E PTKVVCL QVVSP+EL +D
Sbjct: 272  QANVLAQAQQQIALQKLALQGAPYYNMMMPGVDNGMTMPETPTKVVCLKQVVSPDELKED 331

Query: 704  EEFQDILDDMREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHG 525
            +E+++IL+DMREECGK+G +  L +PRP  +GE   GVGKVFVEY+ IE A KAKN+L+G
Sbjct: 332  DEYEEILEDMREECGKYGSVATLVLPRPKSDGEEVAGVGKVFVEYATIEEAIKAKNSLNG 391

Query: 524  RKFGGNSVVAVYFSEEKFSSGDY 456
            RKFGGN V AVYF E+KF  G+Y
Sbjct: 392  RKFGGNIVAAVYFPEDKFLQGEY 414


>ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
            gi|300140455|gb|EFJ07178.1| hypothetical protein
            SELMODRAFT_161898 [Selaginella moellendorffii]
          Length = 420

 Score =  332 bits (850), Expect = 2e-88
 Identities = 174/263 (66%), Positives = 199/263 (75%), Gaps = 10/263 (3%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQPSP                  GPDR+FVGGLPYYLTE QI+ELLESFG LRG
Sbjct: 152  AATLGPSQPSPHLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEGQIKELLESFGPLRG 211

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV---TGQPKPD 864
            FDLV+DRDTGNSKGY FCVYQDP VTD+ACAALNGLKMGDKTLTVRRAT    +GQPKPD
Sbjct: 212  FDLVKDRDTGNSKGYGFCVYQDPAVTDVACAALNGLKMGDKTLTVRRATASVHSGQPKPD 271

Query: 863  QDIVLQQAQQHIAMQKLALQGS--VSSMYP-----LTVQENPTKVVCLTQVVSPEELGDD 705
            Q  VL QAQQ IA+Q LALQG+   + M P     +T+ E PTKVVCL QVVSP+EL +D
Sbjct: 272  QANVLAQAQQQIALQ-LALQGAPYYNMMMPGVDNGMTMPETPTKVVCLKQVVSPDELKED 330

Query: 704  EEFQDILDDMREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHG 525
            +E+++IL+DMREECGK+G +  L +PRP   GE   GVGKVFVEY+ IE A KAKN+L+G
Sbjct: 331  DEYEEILEDMREECGKYGSVATLVLPRPKSNGEEVAGVGKVFVEYATIEEAIKAKNSLNG 390

Query: 524  RKFGGNSVVAVYFSEEKFSSGDY 456
            RKFGGN V AVYF E+KF  G+Y
Sbjct: 391  RKFGGNIVAAVYFPEDKFLQGEY 413


>gb|EPS64699.1| hypothetical protein M569_10077, partial [Genlisea aurea]
          Length = 529

 Score =  329 bits (844), Expect = 1e-87
 Identities = 167/254 (65%), Positives = 196/254 (77%), Gaps = 1/254 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AAALGPSQPSP                  GPDR+FVGGLPYY TE+QIRELLESFG LRG
Sbjct: 286  AAALGPSQPSPNLNLAAVGLMPGSTGGLEGPDRIFVGGLPYYFTESQIRELLESFGPLRG 345

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA   T QPKP+Q+
Sbjct: 346  FDLVKDRETGNSKGYAFCVYQDISVTDIACAALNGIKMGDKTLTVRRANQGTMQPKPEQE 405

Query: 857  IVLQQAQQHIAMQKLALQGSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILDD 678
             VL  AQQ IA+Q+L LQ +V++          TKVVCLTQVV+P+EL DD++++DIL+D
Sbjct: 406  SVLLHAQQQIALQRLMLQPTVAA----------TKVVCLTQVVNPDELHDDDDYEDILED 455

Query: 677  MREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSVV 498
            MR ECGKFG +VN+ IPRP P GE  PGVGKVF+EY+D+E AT+A+  L+GRKFGGN VV
Sbjct: 456  MRTECGKFGNLVNVVIPRPLPSGEAGPGVGKVFLEYADVESATRARQGLNGRKFGGNQVV 515

Query: 497  AVYFSEEKFSSGDY 456
             V++ E KFS GDY
Sbjct: 516  GVFYPENKFSEGDY 529


>ref|XP_006466768.1| PREDICTED: splicing factor U2af large subunit B-like isoform X6
            [Citrus sinensis]
          Length = 368

 Score =  327 bits (838), Expect = 6e-87
 Identities = 169/256 (66%), Positives = 197/256 (76%), Gaps = 2/256 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQP+P                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 123  AATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 182

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA     QPKP+Q+
Sbjct: 183  FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE 242

Query: 857  IVLQQAQQHIAMQKLALQ-GSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILD 681
             VL  AQQ IA+Q+L LQ GSV           P+KVVCLTQVVS +EL DDEE+++IL+
Sbjct: 243  SVLLHAQQQIALQRLMLQPGSV-----------PSKVVCLTQVVSADELKDDEEYEEILE 291

Query: 680  DMREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSV 501
            DMR+E GKFG +VN+ IPRP+P GE  PGVGKVF+EY+DI+GATKA+  ++GRKFGGN V
Sbjct: 292  DMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQV 351

Query: 500  VAVYFSEEKFSSGDYE 453
            VAV++ E KF+ GDYE
Sbjct: 352  VAVFYPENKFAQGDYE 367


>ref|XP_006466767.1| PREDICTED: splicing factor U2af large subunit B-like isoform X5
            [Citrus sinensis]
          Length = 380

 Score =  327 bits (838), Expect = 6e-87
 Identities = 169/256 (66%), Positives = 197/256 (76%), Gaps = 2/256 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQP+P                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 135  AATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 194

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA     QPKP+Q+
Sbjct: 195  FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE 254

Query: 857  IVLQQAQQHIAMQKLALQ-GSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILD 681
             VL  AQQ IA+Q+L LQ GSV           P+KVVCLTQVVS +EL DDEE+++IL+
Sbjct: 255  SVLLHAQQQIALQRLMLQPGSV-----------PSKVVCLTQVVSADELKDDEEYEEILE 303

Query: 680  DMREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSV 501
            DMR+E GKFG +VN+ IPRP+P GE  PGVGKVF+EY+DI+GATKA+  ++GRKFGGN V
Sbjct: 304  DMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQV 363

Query: 500  VAVYFSEEKFSSGDYE 453
            VAV++ E KF+ GDYE
Sbjct: 364  VAVFYPENKFAQGDYE 379


>ref|XP_006466765.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
            [Citrus sinensis] gi|568824768|ref|XP_006466766.1|
            PREDICTED: splicing factor U2af large subunit B-like
            isoform X4 [Citrus sinensis]
          Length = 394

 Score =  327 bits (838), Expect = 6e-87
 Identities = 169/256 (66%), Positives = 197/256 (76%), Gaps = 2/256 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQP+P                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 149  AATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 208

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA     QPKP+Q+
Sbjct: 209  FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE 268

Query: 857  IVLQQAQQHIAMQKLALQ-GSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILD 681
             VL  AQQ IA+Q+L LQ GSV           P+KVVCLTQVVS +EL DDEE+++IL+
Sbjct: 269  SVLLHAQQQIALQRLMLQPGSV-----------PSKVVCLTQVVSADELKDDEEYEEILE 317

Query: 680  DMREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSV 501
            DMR+E GKFG +VN+ IPRP+P GE  PGVGKVF+EY+DI+GATKA+  ++GRKFGGN V
Sbjct: 318  DMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQV 377

Query: 500  VAVYFSEEKFSSGDYE 453
            VAV++ E KF+ GDYE
Sbjct: 378  VAVFYPENKFAQGDYE 393


>ref|XP_006466764.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
            [Citrus sinensis]
          Length = 581

 Score =  327 bits (838), Expect = 6e-87
 Identities = 169/256 (66%), Positives = 197/256 (76%), Gaps = 2/256 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQP+P                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 336  AATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 395

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA     QPKP+Q+
Sbjct: 396  FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE 455

Query: 857  IVLQQAQQHIAMQKLALQ-GSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILD 681
             VL  AQQ IA+Q+L LQ GSV           P+KVVCLTQVVS +EL DDEE+++IL+
Sbjct: 456  SVLLHAQQQIALQRLMLQPGSV-----------PSKVVCLTQVVSADELKDDEEYEEILE 504

Query: 680  DMREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSV 501
            DMR+E GKFG +VN+ IPRP+P GE  PGVGKVF+EY+DI+GATKA+  ++GRKFGGN V
Sbjct: 505  DMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQV 564

Query: 500  VAVYFSEEKFSSGDYE 453
            VAV++ E KF+ GDYE
Sbjct: 565  VAVFYPENKFAQGDYE 580


>ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
            gi|557527705|gb|ESR38955.1| hypothetical protein
            CICLE_v10025221mg [Citrus clementina]
          Length = 592

 Score =  327 bits (838), Expect = 6e-87
 Identities = 169/256 (66%), Positives = 197/256 (76%), Gaps = 2/256 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQP+P                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 347  AATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 406

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA     QPKP+Q+
Sbjct: 407  FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE 466

Query: 857  IVLQQAQQHIAMQKLALQ-GSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILD 681
             VL  AQQ IA+Q+L LQ GSV           P+KVVCLTQVVS +EL DDEE+++IL+
Sbjct: 467  SVLLHAQQQIALQRLMLQPGSV-----------PSKVVCLTQVVSADELKDDEEYEEILE 515

Query: 680  DMREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSV 501
            DMR+E GKFG +VN+ IPRP+P GE  PGVGKVF+EY+DI+GATKA+  ++GRKFGGN V
Sbjct: 516  DMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQV 575

Query: 500  VAVYFSEEKFSSGDYE 453
            VAV++ E KF+ GDYE
Sbjct: 576  VAVFYPENKFAQGDYE 591


>ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
            gi|568824761|ref|XP_006466763.1| PREDICTED: splicing
            factor U2af large subunit B-like isoform X1 [Citrus
            sinensis] gi|557527704|gb|ESR38954.1| hypothetical
            protein CICLE_v10025221mg [Citrus clementina]
          Length = 593

 Score =  327 bits (838), Expect = 6e-87
 Identities = 169/256 (66%), Positives = 197/256 (76%), Gaps = 2/256 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQP+P                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 348  AATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 407

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA     QPKP+Q+
Sbjct: 408  FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE 467

Query: 857  IVLQQAQQHIAMQKLALQ-GSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILD 681
             VL  AQQ IA+Q+L LQ GSV           P+KVVCLTQVVS +EL DDEE+++IL+
Sbjct: 468  SVLLHAQQQIALQRLMLQPGSV-----------PSKVVCLTQVVSADELKDDEEYEEILE 516

Query: 680  DMREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSV 501
            DMR+E GKFG +VN+ IPRP+P GE  PGVGKVF+EY+DI+GATKA+  ++GRKFGGN V
Sbjct: 517  DMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQV 576

Query: 500  VAVYFSEEKFSSGDYE 453
            VAV++ E KF+ GDYE
Sbjct: 577  VAVFYPENKFAQGDYE 592


>ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
            gi|355487095|gb|AES68298.1| Splicing factor U2af large
            subunit B [Medicago truncatula]
          Length = 626

 Score =  325 bits (833), Expect = 2e-86
 Identities = 161/257 (62%), Positives = 198/257 (77%), Gaps = 3/257 (1%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AAALGPSQP+P                  GPDR+FVGG+PYY TE QIRELLE+FG LRG
Sbjct: 379  AAALGPSQPNPNLNLGLVGLSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRG 438

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRA---TVTGQPKPD 864
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA   T   QPKP+
Sbjct: 439  FDLVKDRETGNSKGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQPKPE 498

Query: 863  QDIVLQQAQQHIAMQKLALQGSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDIL 684
            Q+ +L  AQQ IA+QKL LQ ++ +          TKV+CLT  VSP+EL DDE++++IL
Sbjct: 499  QESILMHAQQQIALQKLMLQPALVA----------TKVLCLTHAVSPDELKDDEDYEEIL 548

Query: 683  DDMREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNS 504
            DDMR+EC KFG +VN+ IPRP P+GE+ PGVGKVF+EY+D++G+TKA++ L+GRKFGGN 
Sbjct: 549  DDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKARSGLNGRKFGGNQ 608

Query: 503  VVAVYFSEEKFSSGDYE 453
            V+AV++ E KF+ GDYE
Sbjct: 609  VIAVFYPENKFAQGDYE 625


>ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
            gi|355478498|gb|AES59701.1| Splicing factor U2af large
            subunit B [Medicago truncatula]
          Length = 611

 Score =  325 bits (833), Expect = 2e-86
 Identities = 161/257 (62%), Positives = 198/257 (77%), Gaps = 3/257 (1%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AAALGPSQP+P                  GPDR+FVGG+PYY TE QIRELLE+FG LRG
Sbjct: 364  AAALGPSQPNPNLNLGLVGLSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRG 423

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRA---TVTGQPKPD 864
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA   T   QPKP+
Sbjct: 424  FDLVKDRETGNSKGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQPKPE 483

Query: 863  QDIVLQQAQQHIAMQKLALQGSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDIL 684
            Q+ +L  AQQ IA+QKL LQ ++ +          TKV+CLT  VSP+EL DDE++++IL
Sbjct: 484  QESILMHAQQQIALQKLMLQPALVA----------TKVLCLTHAVSPDELKDDEDYEEIL 533

Query: 683  DDMREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNS 504
            DDMR+EC KFG +VN+ IPRP P+GE+ PGVGKVF+EY+D++G+TKA++ L+GRKFGGN 
Sbjct: 534  DDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKARSGLNGRKFGGNQ 593

Query: 503  VVAVYFSEEKFSSGDYE 453
            V+AV++ E KF+ GDYE
Sbjct: 594  VIAVFYPENKFAQGDYE 610


>ref|XP_001765745.1| predicted protein [Physcomitrella patens] gi|162682922|gb|EDQ69336.1|
            predicted protein [Physcomitrella patens]
          Length = 491

 Score =  325 bits (833), Expect = 2e-86
 Identities = 171/253 (67%), Positives = 194/253 (76%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQPSP                  GPDR+FVGGLPYYLTE QI+ELLESFG LRG
Sbjct: 248  AATLGPSQPSPHLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEIQIKELLESFGPLRG 307

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATVTGQPKPDQDI 855
            FDLV+DRDTGNSKGY FCVYQDP VTD+A AALNGLKMGDKTL+VRRA+ +GQPKPDQ  
Sbjct: 308  FDLVKDRDTGNSKGYGFCVYQDPAVTDVAIAALNGLKMGDKTLSVRRASASGQPKPDQAN 367

Query: 854  VLQQAQQHIAMQKLALQGSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILDDM 675
            VL  AQQ IA+Q       V  M PL   E  TKVV LTQVVSP+EL DDEE+QDIL+DM
Sbjct: 368  VLAHAQQQIAIQ-------VFWMSPL---ETSTKVVALTQVVSPDELKDDEEYQDILEDM 417

Query: 674  REECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSVVA 495
            +EECGK+G ++ + IPRP  +GE  PGVGKVFVEYSD  GA KAK +LHGR+FGG+SVVA
Sbjct: 418  KEECGKYGNLLRVVIPRPR-DGEDVPGVGKVFVEYSDTAGAAKAKASLHGRRFGGHSVVA 476

Query: 494  VYFSEEKFSSGDY 456
            VY+ EEKF++GDY
Sbjct: 477  VYYPEEKFAAGDY 489


>ref|XP_006856065.1| hypothetical protein AMTR_s00059p00102910 [Amborella trichopoda]
            gi|548859924|gb|ERN17532.1| hypothetical protein
            AMTR_s00059p00102910 [Amborella trichopoda]
          Length = 551

 Score =  324 bits (831), Expect = 4e-86
 Identities = 168/255 (65%), Positives = 192/255 (75%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AAALGPSQP+P                  GPDR+FVGGLPYYLTE QIRELLESFG LRG
Sbjct: 306  AAALGPSQPNPNLHLAAVGLTPGAVGGLEGPDRIFVGGLPYYLTEVQIRELLESFGPLRG 365

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA     QP+P+QD
Sbjct: 366  FDLVKDRETGNSKGYAFCVYQDQSVTDIACAALNGIKMGDKTLTVRRAAQGNAQPRPEQD 425

Query: 857  IVLQQAQQHIAMQKLALQGSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILDD 678
             VL  AQQ IA+QKL  Q          V   PTKVVCLTQ V+ +EL DDE++ DI+DD
Sbjct: 426  SVLLHAQQQIALQKLVFQ----------VGAQPTKVVCLTQAVNVDELKDDEDYLDIMDD 475

Query: 677  MREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSVV 498
            MREE GKFG +VN+ IPRP P GE  PGVGKVF+EYSD EGA+KA+  L+GRKFGGN+VV
Sbjct: 476  MREEGGKFGSLVNVVIPRPGPIGEQFPGVGKVFLEYSDTEGASKARATLNGRKFGGNTVV 535

Query: 497  AVYFSEEKFSSGDYE 453
            AVY+ E+KFS  +Y+
Sbjct: 536  AVYYPEDKFSRQEYD 550


>ref|XP_004233511.1| PREDICTED: splicing factor U2af large subunit B-like [Solanum
            lycopersicum]
          Length = 560

 Score =  324 bits (830), Expect = 5e-86
 Identities = 164/255 (64%), Positives = 193/255 (75%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQP+P                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 315  AATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGALRG 374

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA   T QPKP+Q+
Sbjct: 375  FDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQE 434

Query: 857  IVLQQAQQHIAMQKLALQGSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILDD 678
             VL  AQQ IA+Q+L LQ    +          TKV+CLTQVV  +EL +DE++QDIL+D
Sbjct: 435  SVLLHAQQQIALQRLMLQPGALA----------TKVLCLTQVVEVDELSNDEDYQDILED 484

Query: 677  MREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSVV 498
            MR ECGKFG +VN+ IPRPSP+GE  PGVGKVF+EY D+E A+KA+ +L+GRKFGGN V+
Sbjct: 485  MRTECGKFGPLVNVVIPRPSPDGEHAPGVGKVFLEYGDVESASKARQSLNGRKFGGNQVI 544

Query: 497  AVYFSEEKFSSGDYE 453
            AV++ E KF  GDY+
Sbjct: 545  AVFYPENKFYEGDYD 559


>ref|XP_006353521.1| PREDICTED: splicing factor U2af large subunit B-like isoform X5
            [Solanum tuberosum] gi|565373936|ref|XP_006353522.1|
            PREDICTED: splicing factor U2af large subunit B-like
            isoform X6 [Solanum tuberosum]
          Length = 367

 Score =  323 bits (828), Expect = 9e-86
 Identities = 163/255 (63%), Positives = 194/255 (76%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQP+P                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 122  AATLGPSQPNPNLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 181

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            F+LV+D++TGNSKGYAFCVY D  VTDIAC ALNG+KMGDKTLTVRRA+  T QPKP+Q+
Sbjct: 182  FNLVKDKETGNSKGYAFCVYADVSVTDIACTALNGIKMGDKTLTVRRASQGTLQPKPEQE 241

Query: 857  IVLQQAQQHIAMQKLALQGSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILDD 678
            IVL  AQQ IA+Q+L LQ              PTKV+CLT VVSP+EL DDE+++DI++D
Sbjct: 242  IVLMHAQQQIALQRLMLQPGGP----------PTKVLCLTHVVSPDELKDDEDYEDIVED 291

Query: 677  MREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSVV 498
            MR ECGKFG +VNL IPRP P+GE  PGVGKVF+EY+D+E +++A+  L+GRKFGGN VV
Sbjct: 292  MRMECGKFGNLVNLVIPRPRPDGEPTPGVGKVFLEYADVESSSRAQQGLNGRKFGGNEVV 351

Query: 497  AVYFSEEKFSSGDYE 453
            AV++ E KFS GDYE
Sbjct: 352  AVFYPENKFSEGDYE 366


>ref|XP_006353520.1| PREDICTED: splicing factor U2af large subunit B-like isoform X4
            [Solanum tuberosum]
          Length = 602

 Score =  323 bits (828), Expect = 9e-86
 Identities = 163/255 (63%), Positives = 194/255 (76%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQP+P                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 357  AATLGPSQPNPNLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 416

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            F+LV+D++TGNSKGYAFCVY D  VTDIAC ALNG+KMGDKTLTVRRA+  T QPKP+Q+
Sbjct: 417  FNLVKDKETGNSKGYAFCVYADVSVTDIACTALNGIKMGDKTLTVRRASQGTLQPKPEQE 476

Query: 857  IVLQQAQQHIAMQKLALQGSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILDD 678
            IVL  AQQ IA+Q+L LQ              PTKV+CLT VVSP+EL DDE+++DI++D
Sbjct: 477  IVLMHAQQQIALQRLMLQPGGP----------PTKVLCLTHVVSPDELKDDEDYEDIVED 526

Query: 677  MREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSVV 498
            MR ECGKFG +VNL IPRP P+GE  PGVGKVF+EY+D+E +++A+  L+GRKFGGN VV
Sbjct: 527  MRMECGKFGNLVNLVIPRPRPDGEPTPGVGKVFLEYADVESSSRAQQGLNGRKFGGNEVV 586

Query: 497  AVYFSEEKFSSGDYE 453
            AV++ E KFS GDYE
Sbjct: 587  AVFYPENKFSEGDYE 601


>ref|XP_006353517.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
            [Solanum tuberosum] gi|565373928|ref|XP_006353518.1|
            PREDICTED: splicing factor U2af large subunit B-like
            isoform X2 [Solanum tuberosum]
            gi|565373930|ref|XP_006353519.1| PREDICTED: splicing
            factor U2af large subunit B-like isoform X3 [Solanum
            tuberosum]
          Length = 605

 Score =  323 bits (828), Expect = 9e-86
 Identities = 163/255 (63%), Positives = 194/255 (76%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQP+P                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 360  AATLGPSQPNPNLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 419

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            F+LV+D++TGNSKGYAFCVY D  VTDIAC ALNG+KMGDKTLTVRRA+  T QPKP+Q+
Sbjct: 420  FNLVKDKETGNSKGYAFCVYADVSVTDIACTALNGIKMGDKTLTVRRASQGTLQPKPEQE 479

Query: 857  IVLQQAQQHIAMQKLALQGSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILDD 678
            IVL  AQQ IA+Q+L LQ              PTKV+CLT VVSP+EL DDE+++DI++D
Sbjct: 480  IVLMHAQQQIALQRLMLQPGGP----------PTKVLCLTHVVSPDELKDDEDYEDIVED 529

Query: 677  MREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSVV 498
            MR ECGKFG +VNL IPRP P+GE  PGVGKVF+EY+D+E +++A+  L+GRKFGGN VV
Sbjct: 530  MRMECGKFGNLVNLVIPRPRPDGEPTPGVGKVFLEYADVESSSRAQQGLNGRKFGGNEVV 589

Query: 497  AVYFSEEKFSSGDYE 453
            AV++ E KFS GDYE
Sbjct: 590  AVFYPENKFSEGDYE 604


>ref|XP_006346940.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
            [Solanum tuberosum] gi|565360367|ref|XP_006346941.1|
            PREDICTED: splicing factor U2af large subunit B-like
            isoform X4 [Solanum tuberosum]
            gi|565360369|ref|XP_006346942.1| PREDICTED: splicing
            factor U2af large subunit B-like isoform X5 [Solanum
            tuberosum]
          Length = 368

 Score =  323 bits (827), Expect = 1e-85
 Identities = 164/255 (64%), Positives = 192/255 (75%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQP+P                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 123  AATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGALRG 182

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA   T QPKP+Q+
Sbjct: 183  FDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQE 242

Query: 857  IVLQQAQQHIAMQKLALQGSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILDD 678
             VL  AQQ IA+Q+  LQ    +          TKV+CLTQVV  +EL +DE++QDIL+D
Sbjct: 243  SVLLHAQQQIALQRFMLQPGALA----------TKVLCLTQVVEVDELSNDEDYQDILED 292

Query: 677  MREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSVV 498
            MR ECGKFG +VN+ IPRPSP+GE  PGVGKVF+EY D+E A+KA+ +L+GRKFGGN VV
Sbjct: 293  MRTECGKFGPLVNVVIPRPSPDGEHAPGVGKVFLEYGDVESASKARQSLNGRKFGGNQVV 352

Query: 497  AVYFSEEKFSSGDYE 453
            AV++ E KF  GDY+
Sbjct: 353  AVFYPENKFYEGDYD 367


>ref|XP_006346939.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
            [Solanum tuberosum]
          Length = 560

 Score =  323 bits (827), Expect = 1e-85
 Identities = 164/255 (64%), Positives = 192/255 (75%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1214 AAALGPSQPSPXXXXXXXXXXXXXXXXXXGPDRVFVGGLPYYLTEAQIRELLESFGTLRG 1035
            AA LGPSQP+P                  GPDR+FVGGLPYY TEAQIRELLESFG LRG
Sbjct: 315  AATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGALRG 374

Query: 1034 FDLVRDRDTGNSKGYAFCVYQDPGVTDIACAALNGLKMGDKTLTVRRATV-TGQPKPDQD 858
            FDLV+DR+TGNSKGYAFCVYQD  VTDIACAALNG+KMGDKTLTVRRA   T QPKP+Q+
Sbjct: 375  FDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQE 434

Query: 857  IVLQQAQQHIAMQKLALQGSVSSMYPLTVQENPTKVVCLTQVVSPEELGDDEEFQDILDD 678
             VL  AQQ IA+Q+  LQ    +          TKV+CLTQVV  +EL +DE++QDIL+D
Sbjct: 435  SVLLHAQQQIALQRFMLQPGALA----------TKVLCLTQVVEVDELSNDEDYQDILED 484

Query: 677  MREECGKFGEIVNLHIPRPSPEGEMRPGVGKVFVEYSDIEGATKAKNALHGRKFGGNSVV 498
            MR ECGKFG +VN+ IPRPSP+GE  PGVGKVF+EY D+E A+KA+ +L+GRKFGGN VV
Sbjct: 485  MRTECGKFGPLVNVVIPRPSPDGEHAPGVGKVFLEYGDVESASKARQSLNGRKFGGNQVV 544

Query: 497  AVYFSEEKFSSGDYE 453
            AV++ E KF  GDY+
Sbjct: 545  AVFYPENKFYEGDYD 559