BLASTX nr result
ID: Ephedra28_contig00013160
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00013160
(1080 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006826767.1| hypothetical protein AMTR_s00136p00085920 [A... 256 1e-65
ref|XP_004250704.1| PREDICTED: pentatricopeptide repeat-containi... 255 2e-65
ref|XP_006343482.1| PREDICTED: pentatricopeptide repeat-containi... 254 4e-65
ref|XP_006343484.1| PREDICTED: pentatricopeptide repeat-containi... 249 1e-63
ref|XP_006343483.1| PREDICTED: pentatricopeptide repeat-containi... 249 1e-63
ref|XP_006343481.1| PREDICTED: pentatricopeptide repeat-containi... 249 1e-63
ref|XP_002299667.2| hypothetical protein POPTR_0001s21880g [Popu... 247 7e-63
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi... 246 1e-62
ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi... 245 2e-62
gb|EOX98058.1| Pentatricopeptide repeat superfamily protein isof... 244 3e-62
gb|ESW20506.1| hypothetical protein PHAVU_006G214900g [Phaseolus... 242 2e-61
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,... 241 4e-61
gb|EOX98059.1| Pentatricopeptide repeat (PPR) superfamily protei... 241 5e-61
gb|EMJ26349.1| hypothetical protein PRUPE_ppa002505mg [Prunus pe... 239 1e-60
ref|XP_004299940.1| PREDICTED: pentatricopeptide repeat-containi... 239 2e-60
ref|XP_003531588.2| PREDICTED: pentatricopeptide repeat-containi... 237 5e-60
ref|XP_004968981.1| PREDICTED: pentatricopeptide repeat-containi... 236 1e-59
ref|XP_006431883.1| hypothetical protein CICLE_v10000525mg [Citr... 235 2e-59
ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [S... 232 2e-58
tpg|DAA58992.1| TPA: hypothetical protein ZEAMMB73_732512 [Zea m... 229 1e-57
>ref|XP_006826767.1| hypothetical protein AMTR_s00136p00085920 [Amborella trichopoda]
gi|548831187|gb|ERM94004.1| hypothetical protein
AMTR_s00136p00085920 [Amborella trichopoda]
Length = 690
Score = 256 bits (654), Expect = 1e-65
Identities = 130/304 (42%), Positives = 194/304 (63%), Gaps = 1/304 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY + F K+R L E+D LG+A E PYC+++DGL K G I EA+ +FE+M K
Sbjct: 344 LLKVYVRGCFFDKSRELLAELDTLGFARDEMPYCLLMDGLAKAGHIDEAKAVFEDMKQKN 403
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
++SDGYS+S +I+A+ + G ++E K L + E +DLV +N LL+AY K G+M+ +M
Sbjct: 404 VKSDGYSHSIIISAYCREGLLEEAKLLAKDFESTSGKYDLVMLNTLLRAYCKGGEMQYVM 463
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
QT+KKMD ISPD T+ L+ YF KEKLY A ++DM ARG QI + C++LI L
Sbjct: 464 QTMKKMDELAISPDLHTFSILIKYFSKEKLYNLAYRTVEDMHARGLQIDEELCTSLILEL 523
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K+G A +A+ ALHE+++ IL++ R+LKDAY ++KDN E IS+ ++
Sbjct: 524 GKAGAASEAYSVYNKLRYTKRTLCKALHEKVLKILVAGRLLKDAYVLVKDNSELISKSAL 583
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
DK V K G+++L+ ++L+A + GY I+ V ++ S Y + K+ L+ +LEW+
Sbjct: 584 DKFVTSFMKFGNINLINDVLRALHNNGYLINQGVFSLAVSRYVGEPEKKELLLHMLEWMS 643
Query: 899 KQGY 910
QGY
Sbjct: 644 GQGY 647
>ref|XP_004250704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Solanum lycopersicum]
Length = 642
Score = 255 bits (652), Expect = 2e-65
Identities = 129/315 (40%), Positives = 203/315 (64%), Gaps = 1/315 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY K GLF K++ L E++ALGYA E P+C+++DGL K G + EA+ +F+EM K
Sbjct: 304 LLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKQ 363
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
+++DGYSYS +I+A + G +++ KKL E+K + +D+V +N +L AY + G M+ +M
Sbjct: 364 VKTDGYSYSIMISAFCRRGLLEDAKKLASEFEEKYDKYDIVILNAMLSAYCRAGKMENVM 423
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
+KKMD ISPD T+ L+ YFCKEKLY A ++DM ++G+Q + CS+LI L
Sbjct: 424 SMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSLIYHL 483
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K+G +AF ALHE ++ IL++ R+LKDAY V+KDN +ISQ +I
Sbjct: 484 GKTGAHSEAFSVYNMLRYSKRTISNALHENILHILIAGRLLKDAYVVVKDNAGFISQPAI 543
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
K + +SG+V+L+ +++ A S+G+KID ++ + + Y K K+ L+ LL+W+
Sbjct: 544 KKFSVNFMRSGNVNLINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLLKWMP 603
Query: 899 KQGYSLPDTVPKSLI 943
+GY++ D+ ++LI
Sbjct: 604 VKGYAI-DSSTRNLI 617
Score = 63.5 bits (153), Expect = 1e-07
Identities = 60/277 (21%), Positives = 119/277 (42%), Gaps = 6/277 (2%)
Frame = +2
Query: 110 IDGLVKHGEIREAQKIFEEMNAKGIRSDGYSYSALIAAHTKM-GDIQEVKKLQEGMEKKK 286
+ L+K+G+ + K+F +M G+ D ++YS L+A K+ G + +L + M
Sbjct: 164 LSSLIKNGKSESSLKLFTQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQEMMSNG 223
Query: 287 ENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAE 466
D VT LL + + +KM SP+ Y +LL+ + ++ Y AE
Sbjct: 224 LEMDSVTYGSLLSVCASHKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAE 283
Query: 467 GILKDMQARGYQIPKASCSTLIKGLAKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDIL 646
++++M++ G + K +TL+K K G ++ ++D L
Sbjct: 284 ALIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGL 343
Query: 647 LSERMLKDAYEVLKDNMEYISQVSID----KMVIEDF-KSGDVHLLINILKAYQSTGYKI 811
L +A V + ME QV D ++I F + G + + ++ K
Sbjct: 344 AKSGHLLEAKSVFDEMME--KQVKTDGYSYSIMISAFCRRGLLEDAKKLASEFEEKYDKY 401
Query: 812 DMKVVTVVTSHYYMKGRDKDLVQLLEWLGKQGYSLPD 922
D+ ++ + S Y G+ ++++ +++ + S PD
Sbjct: 402 DIVILNAMLSAYCRAGKMENVMSMMKKMDDSAIS-PD 437
Score = 63.2 bits (152), Expect = 2e-07
Identities = 56/302 (18%), Positives = 132/302 (43%), Gaps = 4/302 (1%)
Frame = +2
Query: 50 LFGEIDALGYATSETPYCIMIDGLVK-HGEIREAQKIFEEMNAKGIRSDGYSYSALIAAH 226
LF ++ G Y ++ G K +G +A ++ +EM + G+ D +Y +L++
Sbjct: 179 LFTQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQEMMSNGLEMDSVTYGSLLSVC 238
Query: 227 TKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDTHKISPDE 406
+ E K + M+ + + ++ + LL AY + + + +++M + + ++
Sbjct: 239 ASHKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEALIEEMRSAGLVLNK 298
Query: 407 QTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGLAKSGQAMQAFXXXXX 586
Y LL + K L+ ++ +LK+++A GY + L+ GLAKSG ++A
Sbjct: 299 VIYTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDE 358
Query: 587 XXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQ---VSIDKMVIEDFKSGD 757
+ MI +L+DA ++ + E + V ++ M+ ++G
Sbjct: 359 MMEKQVKTDGYSYSIMISAFCRRGLLEDAKKLASEFEEKYDKYDIVILNAMLSAYCRAGK 418
Query: 758 VHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDLVQLLEWLGKQGYSLPDTVPKS 937
+ +++++K + D ++ ++ + + +E + +G+ + + S
Sbjct: 419 MENVMSMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSS 478
Query: 938 LI 943
LI
Sbjct: 479 LI 480
Score = 59.3 bits (142), Expect = 3e-06
Identities = 42/176 (23%), Positives = 76/176 (43%)
Frame = +2
Query: 26 GLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKGIRSDGYSY 205
G + KA L E+ + G Y ++ H E EA K F++M +G + Y Y
Sbjct: 207 GGYYKALELVQEMMSNGLEMDSVTYGSLLSVCASHKECNEAAKYFQKMKDEGHSPNVYHY 266
Query: 206 SALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDT 385
S+L+ A++ + ++ + L E M + V LLK Y+K G + + LK+++
Sbjct: 267 SSLLNAYSADRNYEKAEALIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKSKELLKELEA 326
Query: 386 HKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGLAKSG 553
+ DE + L+ K A+ + +M + + S S +I + G
Sbjct: 327 LGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKQVKTDGYSYSIMISAFCRRG 382
>ref|XP_006343482.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 651
Score = 254 bits (649), Expect = 4e-65
Identities = 128/315 (40%), Positives = 203/315 (64%), Gaps = 1/315 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY K GLF K++ L E++ALGYA E P+C+++DGL K G + EA+ +F+EM K
Sbjct: 304 LLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKH 363
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
+++DGYSYS +I+A + G +++ KK+ E+K + +D+V +N +L AY + G M+ +M
Sbjct: 364 VKTDGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAGKMENVM 423
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
+KKMD ISPD T+ L+ YFCKEKLY A ++DM ++G+Q + CS+LI L
Sbjct: 424 SMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSLIYHL 483
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K+G +AF ALHE ++ IL++ R+LKDAY V+KDN +ISQ +I
Sbjct: 484 GKTGAHSEAFSVYNMLRYSKRTISNALHEHILHILIAGRLLKDAYVVVKDNAGFISQPAI 543
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
K + +SG+V+L+ +++ A S+G+KID ++ + + Y K K+ L+ LL+W+
Sbjct: 544 KKFSVNFMRSGNVNLINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLLKWMP 603
Query: 899 KQGYSLPDTVPKSLI 943
+GY++ D+ ++LI
Sbjct: 604 GKGYAI-DSSTRNLI 617
Score = 63.2 bits (152), Expect = 2e-07
Identities = 56/302 (18%), Positives = 133/302 (44%), Gaps = 4/302 (1%)
Frame = +2
Query: 50 LFGEIDALGYATSETPYCIMIDGLVK-HGEIREAQKIFEEMNAKGIRSDGYSYSALIAAH 226
LF ++ G Y ++ G K +G +A ++ +E+ + G++ D +Y +L++
Sbjct: 179 LFTQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVC 238
Query: 227 TKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDTHKISPDE 406
+ E K + M+ + + ++ + LL AY + + + +++M + + ++
Sbjct: 239 ASHKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNK 298
Query: 407 QTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGLAKSGQAMQAFXXXXX 586
Y LL + K L+ ++ +LK+++A GY + L+ GLAKSG ++A
Sbjct: 299 VIYTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDE 358
Query: 587 XXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQ---VSIDKMVIEDFKSGD 757
+ MI +L+DA +V + E + V ++ M+ ++G
Sbjct: 359 MMEKHVKTDGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAGK 418
Query: 758 VHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDLVQLLEWLGKQGYSLPDTVPKS 937
+ +++++K + D ++ ++ + + +E + +G+ + + S
Sbjct: 419 MENVMSMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSS 478
Query: 938 LI 943
LI
Sbjct: 479 LI 480
Score = 62.0 bits (149), Expect = 4e-07
Identities = 57/275 (20%), Positives = 116/275 (42%), Gaps = 4/275 (1%)
Frame = +2
Query: 110 IDGLVKHGEIREAQKIFEEMNAKGIRSDGYSYSALIAAHTKM-GDIQEVKKLQEGMEKKK 286
+ L+K+G+ + K+F +M G+ D ++YS L+A K+ G + +L + +
Sbjct: 164 LSSLIKNGKSESSLKLFTQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNG 223
Query: 287 ENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAE 466
D VT LL + + +KM SP+ Y +LL+ + ++ Y AE
Sbjct: 224 LQMDSVTYGSLLSVCASHKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAE 283
Query: 467 GILKDMQARGYQIPKASCSTLIKGLAKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDIL 646
++++M++ G + K +TL+K K G ++ ++D L
Sbjct: 284 VLIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGL 343
Query: 647 LSERMLKDAYEVLKDNME---YISQVSIDKMVIEDFKSGDVHLLINILKAYQSTGYKIDM 817
L +A V + ME S M+ +SG + + ++ K D+
Sbjct: 344 AKSGHLLEAKSVFDEMMEKHVKTDGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDI 403
Query: 818 KVVTVVTSHYYMKGRDKDLVQLLEWLGKQGYSLPD 922
++ + S Y G+ ++++ +++ + S PD
Sbjct: 404 VILNAMLSAYCRAGKMENVMSMMKKMDDSAIS-PD 437
Score = 61.2 bits (147), Expect = 7e-07
Identities = 43/176 (24%), Positives = 77/176 (43%)
Frame = +2
Query: 26 GLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKGIRSDGYSY 205
G + KA L E+ + G Y ++ H E EA K F++M +G + Y Y
Sbjct: 207 GGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKECNEAAKYFQKMKDEGHSPNVYHY 266
Query: 206 SALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDT 385
S+L+ A++ + ++ + L E M + V LLK Y+K G + + LK+++
Sbjct: 267 SSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKSKELLKELEA 326
Query: 386 HKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGLAKSG 553
+ DE + L+ K A+ + +M + + S S +I +SG
Sbjct: 327 LGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTDGYSYSIMISAFCRSG 382
>ref|XP_006343484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like isoform X4 [Solanum tuberosum]
Length = 539
Score = 249 bits (637), Expect = 1e-63
Identities = 128/316 (40%), Positives = 203/316 (64%), Gaps = 2/316 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY K GLF K++ L E++ALGYA E P+C+++DGL K G + EA+ +F+EM K
Sbjct: 191 LLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKH 250
Query: 182 IRS-DGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLI 358
+++ DGYSYS +I+A + G +++ KK+ E+K + +D+V +N +L AY + G M+ +
Sbjct: 251 VKTADGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAGKMENV 310
Query: 359 MQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKG 538
M +KKMD ISPD T+ L+ YFCKEKLY A ++DM ++G+Q + CS+LI
Sbjct: 311 MSMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSLIYH 370
Query: 539 LAKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVS 718
L K+G +AF ALHE ++ IL++ R+LKDAY V+KDN +ISQ +
Sbjct: 371 LGKTGAHSEAFSVYNMLRYSKRTISNALHEHILHILIAGRLLKDAYVVVKDNAGFISQPA 430
Query: 719 IDKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWL 895
I K + +SG+V+L+ +++ A S+G+KID ++ + + Y K K+ L+ LL+W+
Sbjct: 431 IKKFSVNFMRSGNVNLINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLLKWM 490
Query: 896 GKQGYSLPDTVPKSLI 943
+GY++ D+ ++LI
Sbjct: 491 PGKGYAI-DSSTRNLI 505
Score = 61.6 bits (148), Expect = 5e-07
Identities = 57/276 (20%), Positives = 116/276 (42%), Gaps = 5/276 (1%)
Frame = +2
Query: 110 IDGLVKHGEIREAQKIFEEMNAKGIRSDGYSYSALIAAHTKM-GDIQEVKKLQEGMEKKK 286
+ L+K+G+ + K+F +M G+ D ++YS L+A K+ G + +L + +
Sbjct: 51 LSSLIKNGKSESSLKLFTQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNG 110
Query: 287 ENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAE 466
D VT LL + + +KM SP+ Y +LL+ + ++ Y AE
Sbjct: 111 LQMDSVTYGSLLSVCASHKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAE 170
Query: 467 GILKDMQARGYQIPKASCSTLIKGLAKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDIL 646
++++M++ G + K +TL+K K G ++ ++D L
Sbjct: 171 VLIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGL 230
Query: 647 LSERMLKDAYEVLKDNME----YISQVSIDKMVIEDFKSGDVHLLINILKAYQSTGYKID 814
L +A V + ME S M+ +SG + + ++ K D
Sbjct: 231 AKSGHLLEAKSVFDEMMEKHVKTADGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYD 290
Query: 815 MKVVTVVTSHYYMKGRDKDLVQLLEWLGKQGYSLPD 922
+ ++ + S Y G+ ++++ +++ + S PD
Sbjct: 291 IVILNAMLSAYCRAGKMENVMSMMKKMDDSAIS-PD 325
Score = 59.7 bits (143), Expect = 2e-06
Identities = 56/303 (18%), Positives = 133/303 (43%), Gaps = 5/303 (1%)
Frame = +2
Query: 50 LFGEIDALGYATSETPYCIMIDGLVK-HGEIREAQKIFEEMNAKGIRSDGYSYSALIAAH 226
LF ++ G Y ++ G K +G +A ++ +E+ + G++ D +Y +L++
Sbjct: 66 LFTQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVC 125
Query: 227 TKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDTHKISPDE 406
+ E K + M+ + + ++ + LL AY + + + +++M + + ++
Sbjct: 126 ASHKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNK 185
Query: 407 QTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGLAKSGQAMQAFXXXXX 586
Y LL + K L+ ++ +LK+++A GY + L+ GLAKSG ++A
Sbjct: 186 VIYTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDE 245
Query: 587 XXXXXXXXXXAL-HERMIDILLSERMLKDAYEVLKDNMEYISQ---VSIDKMVIEDFKSG 754
+ MI +L+DA +V + E + V ++ M+ ++G
Sbjct: 246 MMEKHVKTADGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAG 305
Query: 755 DVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDLVQLLEWLGKQGYSLPDTVPK 934
+ +++++K + D ++ ++ + + +E + +G+ + +
Sbjct: 306 KMENVMSMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCS 365
Query: 935 SLI 943
SLI
Sbjct: 366 SLI 368
Score = 57.8 bits (138), Expect = 7e-06
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 1/177 (0%)
Frame = +2
Query: 26 GLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKGIRSDGYSY 205
G + KA L E+ + G Y ++ H E EA K F++M +G + Y Y
Sbjct: 94 GGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKECNEAAKYFQKMKDEGHSPNVYHY 153
Query: 206 SALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDT 385
S+L+ A++ + ++ + L E M + V LLK Y+K G + + LK+++
Sbjct: 154 SSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKSKELLKELEA 213
Query: 386 HKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKA-SCSTLIKGLAKSG 553
+ DE + L+ K A+ + +M + + S S +I +SG
Sbjct: 214 LGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTADGYSYSIMISAFCRSG 270
>ref|XP_006343483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like isoform X3 [Solanum tuberosum]
Length = 646
Score = 249 bits (637), Expect = 1e-63
Identities = 128/316 (40%), Positives = 203/316 (64%), Gaps = 2/316 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY K GLF K++ L E++ALGYA E P+C+++DGL K G + EA+ +F+EM K
Sbjct: 304 LLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKH 363
Query: 182 IRS-DGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLI 358
+++ DGYSYS +I+A + G +++ KK+ E+K + +D+V +N +L AY + G M+ +
Sbjct: 364 VKTADGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAGKMENV 423
Query: 359 MQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKG 538
M +KKMD ISPD T+ L+ YFCKEKLY A ++DM ++G+Q + CS+LI
Sbjct: 424 MSMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSLIYH 483
Query: 539 LAKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVS 718
L K+G +AF ALHE ++ IL++ R+LKDAY V+KDN +ISQ +
Sbjct: 484 LGKTGAHSEAFSVYNMLRYSKRTISNALHEHILHILIAGRLLKDAYVVVKDNAGFISQPA 543
Query: 719 IDKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWL 895
I K + +SG+V+L+ +++ A S+G+KID ++ + + Y K K+ L+ LL+W+
Sbjct: 544 IKKFSVNFMRSGNVNLINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLLKWM 603
Query: 896 GKQGYSLPDTVPKSLI 943
+GY++ D+ ++LI
Sbjct: 604 PGKGYAI-DSSTRNLI 618
Score = 61.6 bits (148), Expect = 5e-07
Identities = 57/276 (20%), Positives = 116/276 (42%), Gaps = 5/276 (1%)
Frame = +2
Query: 110 IDGLVKHGEIREAQKIFEEMNAKGIRSDGYSYSALIAAHTKM-GDIQEVKKLQEGMEKKK 286
+ L+K+G+ + K+F +M G+ D ++YS L+A K+ G + +L + +
Sbjct: 164 LSSLIKNGKSESSLKLFTQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNG 223
Query: 287 ENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAE 466
D VT LL + + +KM SP+ Y +LL+ + ++ Y AE
Sbjct: 224 LQMDSVTYGSLLSVCASHKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAE 283
Query: 467 GILKDMQARGYQIPKASCSTLIKGLAKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDIL 646
++++M++ G + K +TL+K K G ++ ++D L
Sbjct: 284 VLIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGL 343
Query: 647 LSERMLKDAYEVLKDNME----YISQVSIDKMVIEDFKSGDVHLLINILKAYQSTGYKID 814
L +A V + ME S M+ +SG + + ++ K D
Sbjct: 344 AKSGHLLEAKSVFDEMMEKHVKTADGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYD 403
Query: 815 MKVVTVVTSHYYMKGRDKDLVQLLEWLGKQGYSLPD 922
+ ++ + S Y G+ ++++ +++ + S PD
Sbjct: 404 IVILNAMLSAYCRAGKMENVMSMMKKMDDSAIS-PD 438
Score = 59.7 bits (143), Expect = 2e-06
Identities = 56/303 (18%), Positives = 133/303 (43%), Gaps = 5/303 (1%)
Frame = +2
Query: 50 LFGEIDALGYATSETPYCIMIDGLVK-HGEIREAQKIFEEMNAKGIRSDGYSYSALIAAH 226
LF ++ G Y ++ G K +G +A ++ +E+ + G++ D +Y +L++
Sbjct: 179 LFTQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVC 238
Query: 227 TKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDTHKISPDE 406
+ E K + M+ + + ++ + LL AY + + + +++M + + ++
Sbjct: 239 ASHKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNK 298
Query: 407 QTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGLAKSGQAMQAFXXXXX 586
Y LL + K L+ ++ +LK+++A GY + L+ GLAKSG ++A
Sbjct: 299 VIYTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDE 358
Query: 587 XXXXXXXXXXAL-HERMIDILLSERMLKDAYEVLKDNMEYISQ---VSIDKMVIEDFKSG 754
+ MI +L+DA +V + E + V ++ M+ ++G
Sbjct: 359 MMEKHVKTADGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAG 418
Query: 755 DVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDLVQLLEWLGKQGYSLPDTVPK 934
+ +++++K + D ++ ++ + + +E + +G+ + +
Sbjct: 419 KMENVMSMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCS 478
Query: 935 SLI 943
SLI
Sbjct: 479 SLI 481
Score = 57.8 bits (138), Expect = 7e-06
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 1/177 (0%)
Frame = +2
Query: 26 GLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKGIRSDGYSY 205
G + KA L E+ + G Y ++ H E EA K F++M +G + Y Y
Sbjct: 207 GGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKECNEAAKYFQKMKDEGHSPNVYHY 266
Query: 206 SALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDT 385
S+L+ A++ + ++ + L E M + V LLK Y+K G + + LK+++
Sbjct: 267 SSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKSKELLKELEA 326
Query: 386 HKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKA-SCSTLIKGLAKSG 553
+ DE + L+ K A+ + +M + + S S +I +SG
Sbjct: 327 LGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTADGYSYSIMISAFCRSG 383
>ref|XP_006343481.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 652
Score = 249 bits (637), Expect = 1e-63
Identities = 128/316 (40%), Positives = 203/316 (64%), Gaps = 2/316 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY K GLF K++ L E++ALGYA E P+C+++DGL K G + EA+ +F+EM K
Sbjct: 304 LLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKH 363
Query: 182 IRS-DGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLI 358
+++ DGYSYS +I+A + G +++ KK+ E+K + +D+V +N +L AY + G M+ +
Sbjct: 364 VKTADGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAGKMENV 423
Query: 359 MQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKG 538
M +KKMD ISPD T+ L+ YFCKEKLY A ++DM ++G+Q + CS+LI
Sbjct: 424 MSMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSLIYH 483
Query: 539 LAKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVS 718
L K+G +AF ALHE ++ IL++ R+LKDAY V+KDN +ISQ +
Sbjct: 484 LGKTGAHSEAFSVYNMLRYSKRTISNALHEHILHILIAGRLLKDAYVVVKDNAGFISQPA 543
Query: 719 IDKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWL 895
I K + +SG+V+L+ +++ A S+G+KID ++ + + Y K K+ L+ LL+W+
Sbjct: 544 IKKFSVNFMRSGNVNLINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLLKWM 603
Query: 896 GKQGYSLPDTVPKSLI 943
+GY++ D+ ++LI
Sbjct: 604 PGKGYAI-DSSTRNLI 618
Score = 61.6 bits (148), Expect = 5e-07
Identities = 57/276 (20%), Positives = 116/276 (42%), Gaps = 5/276 (1%)
Frame = +2
Query: 110 IDGLVKHGEIREAQKIFEEMNAKGIRSDGYSYSALIAAHTKM-GDIQEVKKLQEGMEKKK 286
+ L+K+G+ + K+F +M G+ D ++YS L+A K+ G + +L + +
Sbjct: 164 LSSLIKNGKSESSLKLFTQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNG 223
Query: 287 ENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAE 466
D VT LL + + +KM SP+ Y +LL+ + ++ Y AE
Sbjct: 224 LQMDSVTYGSLLSVCASHKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAE 283
Query: 467 GILKDMQARGYQIPKASCSTLIKGLAKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDIL 646
++++M++ G + K +TL+K K G ++ ++D L
Sbjct: 284 VLIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGL 343
Query: 647 LSERMLKDAYEVLKDNME----YISQVSIDKMVIEDFKSGDVHLLINILKAYQSTGYKID 814
L +A V + ME S M+ +SG + + ++ K D
Sbjct: 344 AKSGHLLEAKSVFDEMMEKHVKTADGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYD 403
Query: 815 MKVVTVVTSHYYMKGRDKDLVQLLEWLGKQGYSLPD 922
+ ++ + S Y G+ ++++ +++ + S PD
Sbjct: 404 IVILNAMLSAYCRAGKMENVMSMMKKMDDSAIS-PD 438
Score = 59.7 bits (143), Expect = 2e-06
Identities = 56/303 (18%), Positives = 133/303 (43%), Gaps = 5/303 (1%)
Frame = +2
Query: 50 LFGEIDALGYATSETPYCIMIDGLVK-HGEIREAQKIFEEMNAKGIRSDGYSYSALIAAH 226
LF ++ G Y ++ G K +G +A ++ +E+ + G++ D +Y +L++
Sbjct: 179 LFTQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVC 238
Query: 227 TKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDTHKISPDE 406
+ E K + M+ + + ++ + LL AY + + + +++M + + ++
Sbjct: 239 ASHKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNK 298
Query: 407 QTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGLAKSGQAMQAFXXXXX 586
Y LL + K L+ ++ +LK+++A GY + L+ GLAKSG ++A
Sbjct: 299 VIYTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDE 358
Query: 587 XXXXXXXXXXAL-HERMIDILLSERMLKDAYEVLKDNMEYISQ---VSIDKMVIEDFKSG 754
+ MI +L+DA +V + E + V ++ M+ ++G
Sbjct: 359 MMEKHVKTADGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAG 418
Query: 755 DVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDLVQLLEWLGKQGYSLPDTVPK 934
+ +++++K + D ++ ++ + + +E + +G+ + +
Sbjct: 419 KMENVMSMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCS 478
Query: 935 SLI 943
SLI
Sbjct: 479 SLI 481
Score = 57.8 bits (138), Expect = 7e-06
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 1/177 (0%)
Frame = +2
Query: 26 GLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKGIRSDGYSY 205
G + KA L E+ + G Y ++ H E EA K F++M +G + Y Y
Sbjct: 207 GGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKECNEAAKYFQKMKDEGHSPNVYHY 266
Query: 206 SALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDT 385
S+L+ A++ + ++ + L E M + V LLK Y+K G + + LK+++
Sbjct: 267 SSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKSKELLKELEA 326
Query: 386 HKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKA-SCSTLIKGLAKSG 553
+ DE + L+ K A+ + +M + + S S +I +SG
Sbjct: 327 LGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTADGYSYSIMISAFCRSG 383
>ref|XP_002299667.2| hypothetical protein POPTR_0001s21880g [Populus trichocarpa]
gi|550347847|gb|EEE84472.2| hypothetical protein
POPTR_0001s21880g [Populus trichocarpa]
Length = 673
Score = 247 bits (630), Expect = 7e-63
Identities = 129/315 (40%), Positives = 195/315 (61%), Gaps = 1/315 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY + GLF K+R L E+D LG+A +E PYC+++DGL K+G + EA+ +F EM K
Sbjct: 331 LLKVYVRGGLFEKSRDLLVELDTLGFAKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKR 390
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
++S GYSYS +I++ + G +E K+L E E K + +D+V +N +L AY + G+ + +M
Sbjct: 391 VKSGGYSYSIMISSFCRGGLFEEAKELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVM 450
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
+T++KMD ISPD T+ L+ YFCKEKLY A ++DM +G+Q + CS+LI L
Sbjct: 451 RTMRKMDELAISPDYNTFHILIKYFCKEKLYMLAYQTMEDMHRKGHQPMEELCSSLILHL 510
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K +AF A HE ++ IL++ R+LKDAY V+KDN E IS +I
Sbjct: 511 GKIKAHAEAFSVYSMLKSSKRTMSKAFHEDILHILIAGRLLKDAYVVVKDNAELISPAAI 570
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
K K GD++L+ +++K +GYKID ++ + S Y + KD L+QLL+W+
Sbjct: 571 KKFASSFVKLGDINLINDVMKVIHGSGYKIDQELFLMAVSRYIAEPEKKDLLIQLLQWMP 630
Query: 899 KQGYSLPDTVPKSLI 943
QGY + D+ ++LI
Sbjct: 631 GQGY-VVDSSTRNLI 644
Score = 57.4 bits (137), Expect = 1e-05
Identities = 39/174 (22%), Positives = 77/174 (44%)
Frame = +2
Query: 32 FIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKGIRSDGYSYSA 211
+ KA L E++ G Y ++ + EAQ F +M +G + + YS+
Sbjct: 236 YSKALDLVQELNYNGLQMDSIMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIFHYSS 295
Query: 212 LIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIMQTLKKMDTHK 391
L+ A++ G+ ++ ++L + M+ + V + LLK Y++ G + L ++DT
Sbjct: 296 LLNAYSSDGNYKKAEELVQDMKSSGLVPNKVILTTLLKVYVRGGLFEKSRDLLVELDTLG 355
Query: 392 ISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGLAKSG 553
+ +E Y L+ K L A + +M+ + + S S +I + G
Sbjct: 356 FAKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRVKSGGYSYSIMISSFCRGG 409
>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 246 bits (628), Expect = 1e-62
Identities = 130/315 (41%), Positives = 196/315 (62%), Gaps = 1/315 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY + GLF K+R L E+++LGY +E PYC+++DGL K G IREA+ +F+EM AK
Sbjct: 319 LLKVYVRGGLFEKSRKLLSELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKN 378
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
+++DGY++S +I+A + G ++E K L + E + +D+V +N +L AY + G+M+ +M
Sbjct: 379 VKTDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVM 438
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
Q L+KMD ISPD T+ L+ YF KEKLY L+DM +G+Q + CS+LI L
Sbjct: 439 QMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKGHQPEEELCSSLILSL 498
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
+AF ALHE+++ IL++ R+LKDAY V+KDN IS+ +I
Sbjct: 499 GNIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGVISKPAI 558
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDL-VQLLEWLG 898
K K G+V+L+ +++KA +GYKID + + TS Y KDL +QLL+W+
Sbjct: 559 RKFAFGFMKFGNVNLINDVMKAIHGSGYKIDQDLFMIATSRYIELPEKKDLFIQLLKWMP 618
Query: 899 KQGYSLPDTVPKSLI 943
QGY + D+ ++LI
Sbjct: 619 GQGY-VVDSSTRNLI 632
Score = 71.2 bits (173), Expect = 7e-10
Identities = 64/322 (19%), Positives = 134/322 (41%), Gaps = 5/322 (1%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGL--VKHGEIREAQKIFEEMNA 175
+L + G F + LF ++ G Y M+ G VKHG + A ++ +E+
Sbjct: 178 ILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIRVKHGYAK-AMELLKELQD 236
Query: 176 KGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKL 355
G+ D SY LIA +++ ++ M + + ++ LL AY GD K
Sbjct: 237 NGLCMDCVSYGTLIAICASHNRLEDAERFFNQMRAEGHSPNMFHYGSLLNAYSINGDYKK 296
Query: 356 IMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIK 535
+ ++ M + P++ LL + + L+ + +L ++++ GY + L+
Sbjct: 297 ADELIEDMKLTGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELESLGYGENEMPYCLLMD 356
Query: 536 GLAKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKD---NMEYI 706
GLAK+G +A H MI +L++A + KD +
Sbjct: 357 GLAKAGSIREAKTVFDEMKAKNVKTDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRY 416
Query: 707 SQVSIDKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDLVQLL 886
V ++ M+ ++G++ ++ +L+ D ++ +++ + + L
Sbjct: 417 DIVILNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTL 476
Query: 887 EWLGKQGYSLPDTVPKSLIASI 952
E + ++G+ + + SLI S+
Sbjct: 477 EDMHRKGHQPEEELCSSLILSL 498
>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product
[Vitis vinifera]
Length = 659
Score = 245 bits (626), Expect = 2e-62
Identities = 129/304 (42%), Positives = 187/304 (61%), Gaps = 1/304 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY + GLF K+R L E++ LGYA E PYC+++DGL K I EA+ IFEEM K
Sbjct: 317 LLKVYVRGGLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQ 376
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
++SDGY YS +I+A + G ++E K+L E + +DLV +N +L AY + G+M+ +M
Sbjct: 377 VKSDGYCYSIMISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVM 436
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
Q ++KMD ISPD T+ L+ YFCKEKLY A ++DM +G+Q + CS+LI L
Sbjct: 437 QMMRKMDELAISPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLISHL 496
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K QAF ALHE+++ IL++ R+LKDAY V+KDN IS+ SI
Sbjct: 497 GKIRAHSQAFSVYNMLRYSKRTMCKALHEKILHILVAGRLLKDAYVVVKDNEGLISKPSI 556
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
K K G+V+L+ +++KA +GYKID ++ + + Y + K+ L+ LL+W+
Sbjct: 557 KKFATAFMKFGNVNLINDVMKAIHGSGYKIDQELFQMAVTRYIAEPEKKELLLHLLQWMP 616
Query: 899 KQGY 910
QGY
Sbjct: 617 GQGY 620
Score = 60.1 bits (144), Expect = 1e-06
Identities = 61/348 (17%), Positives = 142/348 (40%), Gaps = 39/348 (11%)
Frame = +2
Query: 35 IKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKGIRSDGYSYSAL 214
IKA ++ I + + ++ L+++G+ + K+F +M G+R D +YS L
Sbjct: 152 IKALEIYNSIQDESVRNNVSVCNSVLSCLIRNGKFENSLKLFHQMKQDGLRPDAVTYSTL 211
Query: 215 IAAHTKMGD--------IQEVKKLQEGME-----------------KKKENF-------- 295
+A K+ +QE+++ + M+ K+ EN+
Sbjct: 212 LAGCMKVKHGYSKALELVQEMERSRLPMDSVIYGTLLAVCASNNRCKEAENYFNQMKDEG 271
Query: 296 ---DLVTMNVLLKAYIKEGDMKLIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAE 466
++ + LL AY +GD K ++ M + + P++ LL + + L+ +
Sbjct: 272 HLPNVFHYSSLLNAYSADGDYKKADMLVQDMKSAGLVPNKVILTTLLKVYVRGGLFEKSR 331
Query: 467 GILKDMQARGYQIPKASCSTLIKGLAKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDIL 646
+L +++ GY + L+ GLAKS + ++A + MI
Sbjct: 332 ELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQVKSDGYCYSIMISAF 391
Query: 647 LSERMLKDAYEVLKD---NMEYISQVSIDKMVIEDFKSGDVHLLINILKAYQSTGYKIDM 817
+LK+A ++ +D + V ++ M+ ++G++ ++ +++ D
Sbjct: 392 CRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDELAISPDW 451
Query: 818 KVVTVVTSHYYMKGRDKDLVQLLEWLGKQGYSLPDTVPKSLIASIKAI 961
++ ++ + + +E + +G+ + + SLI+ + I
Sbjct: 452 NTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLISHLGKI 499
>gb|EOX98058.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao]
Length = 717
Score = 244 bits (624), Expect = 3e-62
Identities = 129/322 (40%), Positives = 197/322 (61%), Gaps = 1/322 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY + GLF K+ L E++ALGYA E P+C+++DGL K G + EA+ +F EM K
Sbjct: 311 LLKVYVRGGLFEKSTKLLAELEALGYAEDEMPFCLLMDGLSKAGRLDEARSVFVEMQQKC 370
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
++SDGYS+S +I+A + G +E K+L + E + +DLV +N +L AY + G+M+ +M
Sbjct: 371 VKSDGYSHSIMISALCRAGLFEEAKELAQDFEAQYNKYDLVMLNTMLCAYCRAGEMESVM 430
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
QT+KKMD ISPD T+ L+ YFCKEKLY A ++DM +GY + CS+LI L
Sbjct: 431 QTMKKMDELAISPDYNTFHILIKYFCKEKLYLLAYKTMEDMHGKGYHPEEELCSSLIFQL 490
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K ++AF ALHE+++ IL++ ++LKDAY V+KDN E ISQ +I
Sbjct: 491 GKMKAHLEAFSVYNMLRYSKRTMCKALHEKILHILIAGQLLKDAYVVVKDNAELISQPAI 550
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
K K G+++++ ++LK +GYKID + + S Y + K+ L+QLL+W+
Sbjct: 551 TKFATAFMKLGNINMINDVLKVLHGSGYKIDQGLFQMAISRYLGQPEKKELLLQLLQWMP 610
Query: 899 KQGYSLPDTVPKSLIASIKAIL 964
GY + D+ +++I +L
Sbjct: 611 GHGY-VVDSSTRNMILKNSQLL 631
Score = 66.6 bits (161), Expect = 2e-08
Identities = 65/330 (19%), Positives = 137/330 (41%), Gaps = 8/330 (2%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVK--HGEIREAQKIFEEMNA 175
LL + G F LF ++ G Y ++ G +K HG + A ++ +E+
Sbjct: 170 LLSSLVRNGKFESGIKLFDKMKQDGLTPDSVTYNTLLAGCIKIKHGHSK-ALELIKELKY 228
Query: 176 KGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKL 355
G++ D Y L+A G +E + M ++ + +L + LL AY +G+
Sbjct: 229 NGLKMDSVMYGTLLAVCASSGLHEEAQNYFNQMREEGHSPNLYHYSSLLNAYSYDGNYCK 288
Query: 356 IMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIK 535
+ +++M + + P++ LL + + L+ + +L +++A GY + L+
Sbjct: 289 ADELVEQMKSSGLVPNKVILTTLLKVYVRGGLFEKSTKLLAELEALGYAEDEMPFCLLMD 348
Query: 536 GLAKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKD---NMEYI 706
GL+K+G+ +A H MI L + ++A E+ +D
Sbjct: 349 GLSKAGRLDEARSVFVEMQQKCVKSDGYSHSIMISALCRAGLFEEAKELAQDFEAQYNKY 408
Query: 707 SQVSIDKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDLVQLL 886
V ++ M+ ++G++ ++ +K D ++ ++ + + +
Sbjct: 409 DLVMLNTMLCAYCRAGEMESVMQTMKKMDELAISPDYNTFHILIKYFCKEKLYLLAYKTM 468
Query: 887 EWLGKQGYSLPDTVPKSLI---ASIKAILE 967
E + +GY + + SLI +KA LE
Sbjct: 469 EDMHGKGYHPEEELCSSLIFQLGKMKAHLE 498
>gb|ESW20506.1| hypothetical protein PHAVU_006G214900g [Phaseolus vulgaris]
Length = 639
Score = 242 bits (618), Expect = 2e-61
Identities = 128/315 (40%), Positives = 193/315 (61%), Gaps = 1/315 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY K GLF K+R L E+ +LGYA E PYCI++DGL K G+I EA+ IF+EM
Sbjct: 296 LLKVYVKGGLFDKSRELLAELKSLGYAEDEMPYCILMDGLAKAGQIHEAKLIFDEMMKNH 355
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
+RSDGY++S +I+A + +E K+L + E +D+V +N +L A+ + G+M+ +M
Sbjct: 356 VRSDGYAHSIMISALCRSKLFREAKQLAKDFETTSNKYDIVILNSMLCAFCRVGEMESVM 415
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
+TLKKMD ISP T+ L+ YFC+EK+Y A +KDM ++G+Q + CSTLI L
Sbjct: 416 ETLKKMDELAISPSYNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQPGEELCSTLISHL 475
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
+ +AF +LHE+++ ILL+ +LKDAY V+KDN +YIS+
Sbjct: 476 GQVNAYSEAFSVYNMLRYGKRTMCKSLHEKILYILLAGHLLKDAYVVVKDNAKYISRPPT 535
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
K I KSG+++ + ++LK +GYK+D + + S Y + KD L+ LL+W+
Sbjct: 536 KKFAIAFMKSGNINYINDVLKTLHDSGYKLDQDLFAMAVSRYLGEPEKKDLLLHLLQWMS 595
Query: 899 KQGYSLPDTVPKSLI 943
QGY + D+ ++LI
Sbjct: 596 GQGY-MVDSSTRNLI 609
Score = 64.7 bits (156), Expect = 6e-08
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 1/225 (0%)
Frame = +2
Query: 20 KCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVK-HGEIREAQKIFEEMNAKGIRSDG 196
K G F LF ++ G Y ++ G +K +A ++ +E+ ++ DG
Sbjct: 161 KKGKFDSGMKLFRQMQLDGLVPDPVTYSTLLAGCIKIENGYPKALELIQELQHSKLQMDG 220
Query: 197 YSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIMQTLKK 376
Y ++A G +E +K M+ + + ++ + LL AY G+ K +
Sbjct: 221 VIYGTILAVCASNGKWEEAEKYFNQMKDEGHSRNVYHYSSLLNAYSTCGNYKKADILFQD 280
Query: 377 MDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGLAKSGQ 556
M + + P++ LL + K L+ + +L ++++ GY + L+ GLAK+GQ
Sbjct: 281 MKSEGLVPNKVILTTLLKVYVKGGLFDKSRELLAELKSLGYAEDEMPYCILMDGLAKAGQ 340
Query: 557 AMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKD 691
+A H MI L ++ ++A ++ KD
Sbjct: 341 IHEAKLIFDEMMKNHVRSDGYAHSIMISALCRSKLFREAKQLAKD 385
>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 672
Score = 241 bits (615), Expect = 4e-61
Identities = 129/317 (40%), Positives = 196/317 (61%), Gaps = 3/317 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY + GLF K++ L E++ LGYA E PYC+++DGL K G + EA+ F+EM K
Sbjct: 328 LLKVYVRGGLFEKSQQLLLELETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFDEMKEKN 387
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
++SDGY+YS +I+A+ + ++E K+L + E K + +D+V +N +L AY + GDM+ +M
Sbjct: 388 VKSDGYAYSIMISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDMESVM 447
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
QT++KMD ISP T+ L+ YFCK+KLY A ++DM +G+Q + CS LI L
Sbjct: 448 QTMRKMDELAISPSYCTFHILIKYFCKQKLYLLAYQTMEDMHRKGHQPEEELCSMLIFHL 507
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K+ +AF ALHE+++ +LL ++LKDAY V+KDN E ISQ +I
Sbjct: 508 GKAKAYTEAFSVYTMLKYGKRTMCKALHEKILHVLLGGQLLKDAYVVVKDNAELISQAAI 567
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDM--KVVTVVTSHYYMKGRDKD-LVQLLEW 892
K K G+++L+ +++K S+GYKID ++ + S Y + KD LVQLL+W
Sbjct: 568 KKFANAFMKLGNINLINDVMKVIHSSGYKIDQASELFQMAISRYIAQPEKKDLLVQLLQW 627
Query: 893 LGKQGYSLPDTVPKSLI 943
+ GY + D ++LI
Sbjct: 628 MPGHGY-VVDASTRNLI 643
>gb|EOX98059.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
[Theobroma cacao]
Length = 649
Score = 241 bits (614), Expect = 5e-61
Identities = 129/322 (40%), Positives = 196/322 (60%), Gaps = 1/322 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY + GLF K+ L E++ALGYA E P+C+++DGL K G + EA+ +F EM K
Sbjct: 311 LLKVYVRGGLFEKSTKLLAELEALGYAEDEMPFCLLMDGLSKAGRLDEARSVFVEMQQKC 370
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
++SDGYS+S +I+A + G +E K+L + E + +DLV +N +L AY + G+M+ +M
Sbjct: 371 VKSDGYSHSIMISALCRAGLFEEAKELAQDFEAQYNKYDLVMLNTMLCAYCRAGEMESVM 430
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
QT+KKMD ISPD T+ L+ YFCKEKLY A ++DM +GY + CS+LI L
Sbjct: 431 QTMKKMDELAISPDYNTFHILIKYFCKEKLYLLAYKTMEDMHGKGYHPEEELCSSLIFQL 490
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K ++AF ALHE+++ IL++ ++LKDAY V+KDN E ISQ +I
Sbjct: 491 GKMKAHLEAFSVYNMLRYSKRTMCKALHEKILHILIAGQLLKDAYVVVKDNAELISQPAI 550
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
K K G+++++ ++LK +GYKID + S Y + K+ L+QLL+W+
Sbjct: 551 TKFATAFMKLGNINMINDVLKVLHGSGYKIDQMAI----SRYLGQPEKKELLLQLLQWMP 606
Query: 899 KQGYSLPDTVPKSLIASIKAIL 964
GY + D+ +++I +L
Sbjct: 607 GHGY-VVDSSTRNMILKNSQLL 627
Score = 66.6 bits (161), Expect = 2e-08
Identities = 65/330 (19%), Positives = 137/330 (41%), Gaps = 8/330 (2%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVK--HGEIREAQKIFEEMNA 175
LL + G F LF ++ G Y ++ G +K HG + A ++ +E+
Sbjct: 170 LLSSLVRNGKFESGIKLFDKMKQDGLTPDSVTYNTLLAGCIKIKHGHSK-ALELIKELKY 228
Query: 176 KGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKL 355
G++ D Y L+A G +E + M ++ + +L + LL AY +G+
Sbjct: 229 NGLKMDSVMYGTLLAVCASSGLHEEAQNYFNQMREEGHSPNLYHYSSLLNAYSYDGNYCK 288
Query: 356 IMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIK 535
+ +++M + + P++ LL + + L+ + +L +++A GY + L+
Sbjct: 289 ADELVEQMKSSGLVPNKVILTTLLKVYVRGGLFEKSTKLLAELEALGYAEDEMPFCLLMD 348
Query: 536 GLAKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKD---NMEYI 706
GL+K+G+ +A H MI L + ++A E+ +D
Sbjct: 349 GLSKAGRLDEARSVFVEMQQKCVKSDGYSHSIMISALCRAGLFEEAKELAQDFEAQYNKY 408
Query: 707 SQVSIDKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDLVQLL 886
V ++ M+ ++G++ ++ +K D ++ ++ + + +
Sbjct: 409 DLVMLNTMLCAYCRAGEMESVMQTMKKMDELAISPDYNTFHILIKYFCKEKLYLLAYKTM 468
Query: 887 EWLGKQGYSLPDTVPKSLI---ASIKAILE 967
E + +GY + + SLI +KA LE
Sbjct: 469 EDMHGKGYHPEEELCSSLIFQLGKMKAHLE 498
>gb|EMJ26349.1| hypothetical protein PRUPE_ppa002505mg [Prunus persica]
Length = 664
Score = 239 bits (610), Expect = 1e-60
Identities = 125/315 (39%), Positives = 196/315 (62%), Gaps = 1/315 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY + GLF K+R L E++ALGYA E PYC+++D L K G I EA+ +F+EM K
Sbjct: 316 LLKVYVRGGLFEKSRELLAELEALGYAEDEMPYCLLMDALAKAGRIHEAKLVFDEMKEKS 375
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
IRS+GYSYS +I+A + G +++ K+L + +E+ + FDLV +N ++ AY + G+M +M
Sbjct: 376 IRSNGYSYSIMISAFCRGGLLEDAKQLSKDVERTHDKFDLVMLNTMICAYCRAGEMDSVM 435
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
+ ++KMD KI+PD T+ L+ YFCKEKLY A ++DM +G+Q + CS+L+ L
Sbjct: 436 EMMRKMDEQKITPDYNTFHILIKYFCKEKLYLLAYQTMEDMHNKGHQPDEELCSSLMFLL 495
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K +A+ ALHE+++ ILL+ ++LKDAY V+KDN IS+ ++
Sbjct: 496 GKIRAYSEAYSVYNILRYSKRTMCKALHEKILHILLAGQLLKDAYVVVKDNAGLISKPAV 555
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
K K G+++L+ ++LK ++G KID + + S Y K+ L+Q+L W+
Sbjct: 556 KKFSTAFLKLGNINLINDVLKVIDASGCKIDQGLFQMAISRYIALPEKKELLIQMLLWMP 615
Query: 899 KQGYSLPDTVPKSLI 943
QGY + D+ ++LI
Sbjct: 616 GQGY-VVDSATRNLI 629
>ref|XP_004299940.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 642
Score = 239 bits (609), Expect = 2e-60
Identities = 125/315 (39%), Positives = 192/315 (60%), Gaps = 1/315 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLK Y + GLF K+R L E++ALGYA E PYCI++D K G I +A+ +F+E+ K
Sbjct: 300 LLKAYVRGGLFEKSRELLTELEALGYAEDEMPYCILMDAFAKAGRIEDAKLVFDEIKEKS 359
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
+RSDGYSYS +I+A + G + + K+L + E+ + +DLV +N ++ AY + G+M +M
Sbjct: 360 VRSDGYSYSIMISAFCRGGLVDDAKQLAKDFERTYDKYDLVMLNTMICAYCRAGEMDSVM 419
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
+ L+KMD KI+PD T+ L+ YFCKEKLY A ++DM +GY + CS+L+ L
Sbjct: 420 EMLRKMDELKITPDNNTFHILIKYFCKEKLYMLAYKTMEDMHNKGYPPDEELCSSLMFHL 479
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K +A+ ALHE+++ IL++ R+LKDAY V+KDN IS+ +
Sbjct: 480 GKIRAYSEAYSIYNILRYSKRTMCKALHEKILHILVAGRLLKDAYVVVKDNPRLISKAAT 539
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
K K G+++L+ ++LKA +G KID + + S Y KD L+QLL+W+
Sbjct: 540 MKFATAFMKLGNINLINDVLKAIDGSGCKIDQGIFQMAISRYISDPDKKDLLLQLLQWMP 599
Query: 899 KQGYSLPDTVPKSLI 943
QGY++ D+ ++LI
Sbjct: 600 GQGYTV-DSSTRNLI 613
>ref|XP_003531588.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Glycine max]
Length = 646
Score = 237 bits (605), Expect = 5e-60
Identities = 125/315 (39%), Positives = 193/315 (61%), Gaps = 1/315 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY K GLF K+R L E+ +LGYA E PYCI +DGL K G+I EA+ IF+EM
Sbjct: 303 LLKVYVKGGLFEKSRELLAELKSLGYAEDEMPYCIFMDGLAKAGQIHEAKLIFDEMMKNH 362
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
+RSDGY++S +I+A + +E K+L + E +DLV +N +L A+ + G+M+ +M
Sbjct: 363 VRSDGYAHSIMISAFCRAKLFREAKQLAKDFETTSNKYDLVILNSMLCAFCRVGEMERVM 422
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
+TLKKMD I+P T+ L+ YFC+EK+Y A +KDM ++G+Q + CS+LI L
Sbjct: 423 ETLKKMDELAINPGYNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQPVEELCSSLISHL 482
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
+ +AF +LHE+++ ILL+ ++LKDAY V+KDN ++IS+ +
Sbjct: 483 GQVNAYSEAFSVYNMLKYSKRTMCKSLHEKILHILLAGQLLKDAYVVVKDNAKFISRPAT 542
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
K KSG+++ + ++LK GYK+D + + S Y + KD L+ LL+W+
Sbjct: 543 KKFASAFMKSGNLNYINDVLKTLHDCGYKLDQDLFAMAVSRYLDQPEKKDLLLHLLQWMA 602
Query: 899 KQGYSLPDTVPKSLI 943
QGY++ D+ ++LI
Sbjct: 603 GQGYAV-DSSTRNLI 616
>ref|XP_004968981.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like isoform X1 [Setaria italica]
Length = 645
Score = 236 bits (602), Expect = 1e-59
Identities = 125/315 (39%), Positives = 191/315 (60%), Gaps = 1/315 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY+K G+F KA+ L E++A G+A E PYCI+IDGLVK G+I EA +F EM KG
Sbjct: 299 LLKVYSKGGIFEKAKDLLAELEASGFAQDEMPYCILIDGLVKGGKIEEANMLFNEMKEKG 358
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
++SDGY++S +I+A + G QE K+L + E + ++DLV +N L+ Y DM+ +M
Sbjct: 359 VKSDGYAFSIMISALHRGGHHQESKQLAKEFEAENASYDLVMLNTSLRTYCSTNDMESVM 418
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
+ LKKMD ISPD T+ L+ YFC K+Y A ++DM +G+Q+ + CS ++ L
Sbjct: 419 RMLKKMDELNISPDNITFNTLIRYFCNAKVYHLAYKTVEDMHTKGHQLNEELCSHVMVQL 478
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K+G +AF +LHE+ + IL+S +LKDAY V+KDN E IS S+
Sbjct: 479 GKAGFPSEAFSVYNMLRYSKRTVRKSLHEKALGILVSSELLKDAYIVVKDNAELISPSSL 538
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDLVQ-LLEWLG 898
+K SG+++L+ +++KA +G++I + Y K K L+ LL+W+
Sbjct: 539 EKFARAFMVSGNINLINDVMKALNRSGWRISQDIFGRAIQRYIQKPDKKHLLLCLLDWMT 598
Query: 899 KQGYSLPDTVPKSLI 943
QGYS+ D+ ++L+
Sbjct: 599 GQGYSV-DSSSRNLL 612
>ref|XP_006431883.1| hypothetical protein CICLE_v10000525mg [Citrus clementina]
gi|557534005|gb|ESR45123.1| hypothetical protein
CICLE_v10000525mg [Citrus clementina]
Length = 660
Score = 235 bits (600), Expect = 2e-59
Identities = 125/315 (39%), Positives = 193/315 (61%), Gaps = 1/315 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY + GLF K+R L E+D LGYA +E PYC+++DGL K G + EA+ +F EM K
Sbjct: 316 LLKVYVRGGLFEKSRELLAELDTLGYAENEMPYCLLMDGLSKAGCLDEARVVFNEMQEKC 375
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
++SDGY++S +I+A + G +E K+L E K + +D+V +N +L AY + GDM+ +M
Sbjct: 376 VKSDGYAHSIMISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVM 435
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
++K+D ISPD T+ L+ YFCKEK+Y A + DM +G+Q + CS+LI L
Sbjct: 436 HVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 495
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K +A ALHE+++ IL+S ++LKDAY V+KDN E IS I
Sbjct: 496 GKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPVI 555
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
K + G+++L+ +++KA +TGY+ID + + + Y + K+ L++LLEW+
Sbjct: 556 KKFASAFVRLGNINLVNDVMKAIHTTGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 615
Query: 899 KQGYSLPDTVPKSLI 943
QGY + D+ ++LI
Sbjct: 616 GQGY-VVDSSTRNLI 629
>ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
gi|241927776|gb|EES00921.1| hypothetical protein
SORBIDRAFT_03g025430 [Sorghum bicolor]
Length = 642
Score = 232 bits (592), Expect = 2e-58
Identities = 123/315 (39%), Positives = 192/315 (60%), Gaps = 1/315 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY+K GLF KA+ L E++A G+A E PYCI+IDGLVK G+I+EA+ +F EM KG
Sbjct: 296 LLKVYSKGGLFEKAKELLTELEASGFAQDEMPYCILIDGLVKGGKIQEAKILFNEMKEKG 355
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
++SDGY++S +I+A + G +E K+L + E + ++DLV +N L+ Y DM+ +M
Sbjct: 356 VKSDGYAFSIMISALHRGGHHEESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVM 415
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
+ LKKMD ISPD T+ L+ YFC K+Y A ++DM +G+Q+ + CS ++ L
Sbjct: 416 RMLKKMDELNISPDNITFNTLIRYFCNSKVYHLAYKTVEDMHTKGHQLNEELCSHVMVQL 475
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K G +AF +LHE+ + IL++ +LK+AY V+KDN + IS S+
Sbjct: 476 GKGGFPSEAFSLYNMLRYSKRTVHKSLHEKALGILVAAELLKEAYIVVKDNADLISPASL 535
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLG 898
+K SG+++L+ +++KA +G++I + Y K K LV LL+W+
Sbjct: 536 EKFAKSFMVSGNINLINDVMKALNRSGWRISQDIFGRAIKRYIRKPDKKQLLVCLLDWMI 595
Query: 899 KQGYSLPDTVPKSLI 943
QGYS+ D+ ++L+
Sbjct: 596 GQGYSV-DSSSRNLL 609
>tpg|DAA58992.1| TPA: hypothetical protein ZEAMMB73_732512 [Zea mays]
Length = 642
Score = 229 bits (585), Expect = 1e-57
Identities = 124/325 (38%), Positives = 194/325 (59%), Gaps = 1/325 (0%)
Frame = +2
Query: 2 LLKVYAKCGLFIKARSLFGEIDALGYATSETPYCIMIDGLVKHGEIREAQKIFEEMNAKG 181
LLKVY+K GLF KA+ L E++A G+A E PYCI+IDGLVK G+I+EA +F EM KG
Sbjct: 296 LLKVYSKGGLFEKAKGLLTELEASGFAQDEMPYCILIDGLVKGGKIQEANILFNEMKEKG 355
Query: 182 IRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKENFDLVTMNVLLKAYIKEGDMKLIM 361
++SDGY++S +I+A + G QE K+L + E + ++DLV +N L+ Y DM+ +M
Sbjct: 356 VKSDGYAFSIMISALHRGGHHQESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVM 415
Query: 362 QTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSTLIKGL 541
+ LKKMD ISPD T+ L+ YFC K+ A ++DM A+G+Q+ + CS ++ L
Sbjct: 416 RMLKKMDESNISPDNITFNTLIRYFCNAKVCHLAYKTVEDMHAKGHQLNEELCSHVMVQL 475
Query: 542 AKSGQAMQAFXXXXXXXXXXXXXXXALHERMIDILLSERMLKDAYEVLKDNMEYISQVSI 721
K+G +AF +LHE+++ IL+ +LK AY V+KDN + IS S+
Sbjct: 476 GKAGFPSEAFSVYNMLRYSKRTVHKSLHEKVLGILVPAELLKAAYIVVKDNADLISPSSL 535
Query: 722 DKMVIEDFKSGDVHLLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDLVQ-LLEWLG 898
+K SG+++L+ +++KA +G++I + Y K K L+ LL+W+
Sbjct: 536 EKFAKSFMVSGNINLINDVMKALNRSGWRISQDIFGRAIKRYIQKPDKKQLLLCLLDWMI 595
Query: 899 KQGYSLPDTVPKSLIASIKAILEDK 973
QGYS+ D+ ++L+ + +K
Sbjct: 596 GQGYSV-DSSSRNLLLKNAQLFGEK 619