BLASTX nr result
ID: Ephedra28_contig00013159
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00013159
(1650 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262... 163 2e-37
ref|XP_004977300.1| PREDICTED: probable mediator of RNA polymera... 152 5e-34
ref|NP_001066244.1| Os12g0165700 [Oryza sativa Japonica Group] g... 151 7e-34
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm... 151 9e-34
ref|XP_004249876.1| PREDICTED: probable mediator of RNA polymera... 150 2e-33
gb|EOY19919.1| Transcription elongation factor (TFIIS) family pr... 150 2e-33
ref|XP_004978772.1| PREDICTED: probable mediator of RNA polymera... 149 3e-33
ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832... 149 3e-33
ref|XP_006351014.1| PREDICTED: probable mediator of RNA polymera... 148 8e-33
ref|XP_002442867.1| hypothetical protein SORBIDRAFT_08g004100 [S... 148 8e-33
ref|XP_004502892.1| PREDICTED: probable mediator of RNA polymera... 147 1e-32
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 146 2e-32
dbj|BAJ88583.1| predicted protein [Hordeum vulgare subsp. vulgare] 146 2e-32
ref|NP_001143340.1| uncharacterized protein LOC100275944 [Zea ma... 145 4e-32
ref|XP_003525100.1| PREDICTED: probable mediator of RNA polymera... 145 5e-32
gb|ACN28424.1| unknown [Zea mays] gi|413916220|gb|AFW56152.1| hy... 145 5e-32
ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citr... 145 7e-32
ref|XP_004977301.1| PREDICTED: probable mediator of RNA polymera... 144 9e-32
ref|XP_006581749.1| PREDICTED: probable mediator of RNA polymera... 144 1e-31
ref|XP_006851404.1| hypothetical protein AMTR_s00040p00061970 [A... 141 9e-31
>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
gi|296081186|emb|CBI18212.3| unnamed protein product
[Vitis vinifera]
Length = 332
Score = 163 bits (412), Expect = 2e-37
Identities = 112/367 (30%), Positives = 186/367 (50%), Gaps = 9/367 (2%)
Frame = +2
Query: 179 KTIRISXEVDIWAVINGAIALASLDYPEEFKEKRDKIAAQLYS---SRCHKCDANGTTTR 349
++I S VD+W +I A+++AS+DY EEFK +RD I +LY+ SRC CD +
Sbjct: 7 RSILESSGVDVWTLIETAVSVASVDYSEEFKGRRDSIVERLYTPVVSRCLNCDRDRIHKP 66
Query: 350 VAASGTKTKPNQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXX 529
K K +Q + +R+GS D
Sbjct: 67 NGDRSVKEKMDQLQ-----DESWIETPESVERDRDGSIDEE------------------- 102
Query: 530 XXXCETELKEIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSN 709
++++ I++ L DP Q ++ ++ LLQ L++M ++ + + +TDIG+ V+ RKHPSN
Sbjct: 103 ----QSKILAIKERLEDPDQLEDSLVDLLQSLADMDITFKALKETDIGRHVNRLRKHPSN 158
Query: 710 EIRRIARDLIGSWKNLADQWVSTTNDG---GNAAVADGESRPDRNGISRQNASQKYRGSY 880
E+RR+ + L+ WK+L D+WV + G +A VADG+S + S N +
Sbjct: 159 EVRRLVKQLVRKWKDLVDEWVKLSTPGETTASAIVADGDSPQQNHLKSTSNVHHQVPDFA 218
Query: 881 DSSSPLLRDNG--LRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLK 1054
S +P +G N L+ + V + + P N+ + + A +++ K
Sbjct: 219 YSPNPHNGSSGSDKNNVELEPKRKAVPRRETPNKP------NQTPPIPTSVALNKQREQK 272
Query: 1055 RNLADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNT-FNYSR 1231
+L D+ E++AS+++RL ENYQ+ +NAKKQRT+Q+++ + KPKNT F +R
Sbjct: 273 DSLVDE--------EKLASARRRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKNR 324
Query: 1232 GGGQNRH 1252
GG Q +H
Sbjct: 325 GGVQAKH 331
>ref|XP_004977300.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X1 [Setaria italica]
Length = 352
Score = 152 bits (383), Expect = 5e-34
Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 13/363 (3%)
Frame = +2
Query: 206 DIWAVINGAIALASLDYPEEFKEKRDKIAAQLYS-SRCHKCDANGTTTRVAASGTKTKPN 382
D+W +++ A+ A+ D P+E + +RD I +LY+ +RCH CDA G + P
Sbjct: 24 DVWDLVDAALTAAARDNPDELRARRDGIVERLYAGARCHNCDA----------GAPSPPQ 73
Query: 383 QRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXXCETELKEI 562
R+ E + G + + E+++ I
Sbjct: 74 PRKAPEAAAAAEAVSPVSPDEEVDADGLGEDDDDAGV----------------ESKILAI 117
Query: 563 EQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEIRRIARDLIG 742
L DP Q+++++++LLQ L++M ++ + + +TDIG+ V+ RKHPS E+R++ + L+
Sbjct: 118 RDFLEDPDQSEDEMVSLLQNLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVR 177
Query: 743 SWKNLADQWV---STTNDGGNAAVADGESRPD----RNGISRQNASQKYRGSYDSSSPLL 901
WK + D WV ++ DGG++ ++DG+S PD +N S + + KY S S +
Sbjct: 178 KWKEIVDDWVRLHNSAGDGGSSIISDGDS-PDKVQPKNHQSTKASDFKYSPSPQSHNGFS 236
Query: 902 RDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLADQSMG 1081
+ + +++++ K + N N N T + + L R + +Q
Sbjct: 237 SERSIYQNSVESTMEKRRTSPAPAYHN--TKPNNNSNYSTTSSSV----LARTMREQKY- 289
Query: 1082 NMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTFNYSR-----GGGQN 1246
+ + ++ S+++RL+ENYQ+ +NAKKQRT+Q+++ + KPKN + R GG
Sbjct: 290 TLMDPGKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNTFIRKSSGGGGLPA 349
Query: 1247 RHR 1255
RHR
Sbjct: 350 RHR 352
>ref|NP_001066244.1| Os12g0165700 [Oryza sativa Japonica Group]
gi|108862239|gb|ABA95889.2| transcription elongation
factor, putative, expressed [Oryza sativa Japonica Group]
gi|113648751|dbj|BAF29263.1| Os12g0165700 [Oryza sativa
Japonica Group] gi|125535897|gb|EAY82385.1| hypothetical
protein OsI_37597 [Oryza sativa Indica Group]
Length = 340
Score = 151 bits (382), Expect = 7e-34
Identities = 101/355 (28%), Positives = 166/355 (46%), Gaps = 10/355 (2%)
Frame = +2
Query: 206 DIWAVINGAIALASLDYPEEFKEKRDKIAAQLYSS----RCHKCDANGTTTRVAASGTKT 373
D+W +++ A+A A+ D P E + +RD I +LY++ RC CDA + AA+
Sbjct: 19 DVWDLVDAALASAARDRPAELRARRDGIVERLYATAAGGRCGNCDAPRSAEPEAAAAAAA 78
Query: 374 KPNQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXXCETEL 553
P +SP E+++
Sbjct: 79 SP----------------------------------ASPDEDADVDGLDDDEGGGMESKI 104
Query: 554 KEIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEIRRIARD 733
I L DP Q+++++++LLQ L++M ++ + + +TDIG+ V+ RKHPS E+R++ +
Sbjct: 105 LAIRDFLEDPDQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKL 164
Query: 734 LIGSWKNLADQWVSTTN---DGGNAAVADGESRPDRNGISRQNASQKYRGSYDSSSPLLR 904
L+ WK + D WV N DGG++ + DG+S G S QNA + S R
Sbjct: 165 LVRKWKEIVDDWVRLHNSGGDGGSSVLTDGDSPDKIQGRSYQNAQV---SDFKYSPSPQR 221
Query: 905 DNGLRNGALDNSKG---KVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLADQS 1075
NGL + N+ G + + S P N T + R D
Sbjct: 222 HNGLSSERSSNNNGVESMIEKRRTSPAPTYHNNKQNNSIGYSTTSSSAPVRTVREQKD-- 279
Query: 1076 MGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTFNYSRGGG 1240
N+ + E++ S+++RL+ENYQ+ +NAKKQRT+Q+++ + KPKN + R GG
Sbjct: 280 --NLMDLEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNAFIRKGG 332
>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
gi|223530431|gb|EEF32318.1| conserved hypothetical
protein [Ricinus communis]
Length = 362
Score = 151 bits (381), Expect = 9e-34
Identities = 110/369 (29%), Positives = 183/369 (49%), Gaps = 11/369 (2%)
Frame = +2
Query: 179 KTIRISXEVDIWAVINGAIALASLDYPEEFKEKRDKIAAQLYSS--RCHKCDANGTTTRV 352
++I S VD+W I+ AI +ASLD+ E K++RDKI LYSS RC CD +
Sbjct: 7 RSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLYSSSGRCRNCDLDVGRIN- 65
Query: 353 AASGTKTKPNQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXX 532
+G + K + G D + +
Sbjct: 66 --NGHEIKERSHLESKGGGGGGSGSPSTTPRSIHGDEDVDVVNDDDDDDDDDDGLDPYAG 123
Query: 533 XXCETELK--EIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPS 706
+ + K EI+Q L DP Q+++ ++ LLQ L++M ++ + + +TDIG+ V+ RKH S
Sbjct: 124 LFDDEQKKILEIKQHLEDPDQSEDSLVDLLQSLADMDITFKALKETDIGRHVNQLRKHTS 183
Query: 707 NEIRRIARDLIGSWKNLADQWVSTTNDGGNAA---VADGESRPDRNGISRQNASQKYRGS 877
N++RR+ + L+ WK++ D+WV G +A+ +ADG+S + QN +
Sbjct: 184 NDVRRLVKQLVRKWKDIVDEWVKLNPPGQHASSGLMADGDSPRQK---FPQNGHHQVPDF 240
Query: 878 YDSSSPLLRDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKR 1057
S +P NG +NS+ + + V R A ++ + + +H + +
Sbjct: 241 AYSPNP---HNGSSGSDKNNSEPERRPKPVPRKEAPPRPAQQSVPVSASASH-----IVQ 292
Query: 1058 NLADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNT---FNYS 1228
+Q N +S+R+AS+++RL+ NY++ ENAKKQRT+Q+++ E KPKN F +
Sbjct: 293 RQREQQRENNFDSDRLASARKRLQANYKEAENAKKQRTIQVMDIHELPKPKNKNTFFAKN 352
Query: 1229 RGGG-QNRH 1252
+GGG Q RH
Sbjct: 353 KGGGSQGRH 361
>ref|XP_004249876.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Solanum lycopersicum]
Length = 349
Score = 150 bits (379), Expect = 2e-33
Identities = 104/359 (28%), Positives = 177/359 (49%), Gaps = 8/359 (2%)
Frame = +2
Query: 200 EVDIWAVINGAIALASLDYPEEFKEKRDKIAAQLYSSRCHKCDANGTTTRVAASGTKTKP 379
+VD+W +++ AI++A++D +E K +RD I +LY +R D G +GT+
Sbjct: 14 KVDVWTMMDAAISVAAVDCADELKRRRDGIVEKLYFTRSRSSDDVGNGQHRLDNGTRNVE 73
Query: 380 ---NQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXXCETE 550
N+ +T E+E S+D + + P+ +T+
Sbjct: 74 MMMNKSPLT----------PESNQREKENSND-KNEEEEDADPYGGLFDDDDE----QTQ 118
Query: 551 LKEIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEIRRIAR 730
+ I+Q L +P+ +DEDV+ LLQ L++M ++ + + TDIG+ V+ RKHPS+E+RR+ +
Sbjct: 119 ILTIKQQLENPQLSDEDVVDLLQNLADMDITFQALQDTDIGRHVNQLRKHPSSEVRRLVK 178
Query: 731 DLIGSWKNLADQWVSTT----NDGGNAAVADGESRPDRNGISRQNASQKYRGSYDSSSPL 898
L+ WK D WV ++ N AD +S ++QN + + S +P
Sbjct: 179 MLVRKWKGTVDDWVRLNPPEQHESANLIAADDDSPQQSVRRNQQNGNHQVPDFAYSPNP- 237
Query: 899 LRDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLADQSM 1078
RNG+ + + + P R L+ + R L +S
Sbjct: 238 ------RNGSSSSDRNN-SESEYKPKPVPQRNVTPTRPLQSAPKPVSAPPPSRPLPRES- 289
Query: 1079 GNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTF-NYSRGGGQNRH 1252
+ ER+ S+++RL+ENYQ+ +NAKKQRT+Q+++ E KPKN F ++GG Q+RH
Sbjct: 290 --AIDIERLNSARRRLQENYQEAQNAKKQRTIQVMDIHEIPKPKNGFIAKNKGGFQSRH 346
>gb|EOY19919.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao]
Length = 337
Score = 150 bits (378), Expect = 2e-33
Identities = 111/363 (30%), Positives = 175/363 (48%), Gaps = 13/363 (3%)
Frame = +2
Query: 203 VDIWAVINGAIALASLDYPEEFKEKRDKIAAQLYSS----RCHKCDANGTTTRVAASGTK 370
VD+W I+ AI +ASLDY +E K++RD I +LY++ RC CD G + +
Sbjct: 15 VDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSCDF-GERSNGYQVNKE 73
Query: 371 TKPNQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXXC--- 541
PN E +G GR SP TP
Sbjct: 74 GSPN---------------------EGKGGEGGR---ESPFTPQSDNEDGDLDPYGGLFD 109
Query: 542 --ETELKEIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEI 715
+ + EI++ L +P Q+++ ++ LLQ L++M ++ + + +TDIG+ V+ RKH SN++
Sbjct: 110 DEQKRVLEIKESLEEPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSSNDV 169
Query: 716 RRIARDLIGSWKNLADQWVSTTNDG--GNAAVADGESRPDRNGISRQNASQKYRGSYDSS 889
RR+ + L+ WK + D+WV G +AA+ DG+S + QN Q+ S
Sbjct: 170 RRLVKQLVRKWKEIVDEWVRVNQPGELESAALMDGDSPQQK---LPQNGRQQVPDFAYSP 226
Query: 890 SPLLRDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLAD 1069
+P NG+ K N P + ++ T + Q ++R +
Sbjct: 227 NP-------HNGSFGLEK---NNSEPERKPKPIPPPRKDPPPRPTHS-TPPQNVQRQ-RE 274
Query: 1070 QSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTF--NYSRGGGQ 1243
Q N +SER+AS+++RL+ NY++ ENAKKQRT+Q+++ E KPKN F GG Q
Sbjct: 275 QKESNF-DSERLASARKRLQANYKEAENAKKQRTIQVMDIHELPKPKNAFFGKNKGGGSQ 333
Query: 1244 NRH 1252
RH
Sbjct: 334 GRH 336
>ref|XP_004978772.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Setaria italica]
Length = 357
Score = 149 bits (376), Expect = 3e-33
Identities = 104/363 (28%), Positives = 171/363 (47%), Gaps = 13/363 (3%)
Frame = +2
Query: 206 DIWAVINGAIALASLDYPEEFKEKRDKIAAQLYSSR-CHKCDANGTTTRV-----AASGT 367
D WA+++ A+A A+ D P E + +RD I +LY++ C CDA V AA+G
Sbjct: 17 DAWALVDAALAAAARDRPGELRARRDGIVERLYAAAGCSSCDARQPAAPVPRAALAAAGL 76
Query: 368 KTKPNQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXXCET 547
+ + V E E G E+
Sbjct: 77 DEEDGEEAAPVSPEAEGDAAGAGAAEEAEELGAGA-----------------GGEPGLES 119
Query: 548 ELKEIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEIRRIA 727
++ I L DP Q ++++++LLQ L +M ++ + + +TDIG+ V+ RKHPS E+RR+
Sbjct: 120 KIVAIRDFLEDPDQPEDELVSLLQNLEDMDVTYKALQETDIGRHVNGLRKHPSAEVRRLV 179
Query: 728 RDLIGSWKNLADQWVSTTN---DGGNAAVADGESRPDRNGISRQNASQKYRGSYDSSSPL 898
+ LI WK + D WV N DGG++ +ADG+S G S Q S + G S SP
Sbjct: 180 KQLIRKWKEIVDDWVRLHNSGGDGGSSIIADGDSPEKIQGRSHQ--SPRVSGFQYSPSP- 236
Query: 899 LRDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLADQSM 1078
R NG + +N G ++ + + + + ++ +
Sbjct: 237 QRHNGSTSERANN--GFEPTMDMKRRASPVPAHHNSRQMNNNHHSTPMPSAPAKVTRDHK 294
Query: 1079 GNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTFNYSR----GGGQN 1246
++ + +R+ S+++RL+ENYQ+ +NAKKQRT+Q+++ + KPKN + R GG
Sbjct: 295 DSLLDLDRLDSARKRLQENYQEAQNAKKQRTIQVMDINDIPKPKNRNAFIRKNGSGGLPA 354
Query: 1247 RHR 1255
RHR
Sbjct: 355 RHR 357
>ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832597 [Brachypodium
distachyon]
Length = 342
Score = 149 bits (376), Expect = 3e-33
Identities = 106/361 (29%), Positives = 172/361 (47%), Gaps = 12/361 (3%)
Frame = +2
Query: 209 IWAVINGAIALASLDYPEEFKEKRDKIAAQLYS--SRCHKCDANGTTTR--VAASGTKTK 376
+W +++ A+A A P E + +RD I +LY+ SRC CDA R AA+
Sbjct: 21 VWELVDAALASAP---PAELRARRDGIVERLYAAGSRCRNCDAVPQLARQPAAAAAAALS 77
Query: 377 PNQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXXCETELK 556
P + G E E D E+++
Sbjct: 78 PEE----------DADVDGLGEDEEEADDD--------------------EAAGAESKIL 107
Query: 557 EIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEIRRIARDL 736
I L DP Q+++++++LLQ L++M ++ + + TDIG+ V++ RKHPS E+R++ + L
Sbjct: 108 AIRDFLEDPDQSEDELVSLLQNLADMDITYKALQDTDIGRHVNSLRKHPSGEVRQLVKLL 167
Query: 737 IGSWKNLADQWVSTTN---DGGNAAVADGESRPDRNGISRQNASQKYRGSYDSSSPLLRD 907
+ WK + D WV N DGG++ + DG+S G S QNA + S R
Sbjct: 168 VRKWKEIVDGWVRLHNSGGDGGSSILTDGDSPEKTQGKSYQNAQV---SDFKYSPSPQRH 224
Query: 908 NGLRNGALDNSKG-KVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLADQSMGN 1084
NGL + N+ G + T + ++P N+ + + R + +Q N
Sbjct: 225 NGLSSDRSSNNNGFETTMERHRASP--APSYNQTKQNSSNNYSTTSSAPPRTMREQKDNN 282
Query: 1085 MSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTFNYSRGGG----QNRH 1252
+ + E++ S+++RL ENYQ+ +NAKKQRT+Q+L+ + KPKN + R GG RH
Sbjct: 283 L-DLEKLDSARKRLHENYQEAQNAKKQRTMQVLDIHDIPKPKNRNTFIRKGGGGGLPGRH 341
Query: 1253 R 1255
R
Sbjct: 342 R 342
>ref|XP_006351014.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Solanum tuberosum]
Length = 348
Score = 148 bits (373), Expect = 8e-33
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 8/359 (2%)
Frame = +2
Query: 200 EVDIWAVINGAIALASLDYPEEFKEKRDKIAAQLYSSRCHKCDANGTTTRVAASGTKTKP 379
+VD+W +I+ AI++A++D +E K +RD I +LYS+R D G +GT+
Sbjct: 14 KVDVWTMIDAAISVAAVDCADEMKRRRDGIVEKLYSTRSRSSDDVGNGQHRLDNGTRNVE 73
Query: 380 ---NQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXXCETE 550
N+ +T E+E S++ + + P+ +T+
Sbjct: 74 MMMNKSPLT----------PESNQREKENSNE-KNEEEEDADPYGGLFDDDDE----QTQ 118
Query: 551 LKEIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEIRRIAR 730
+ I+Q L +P+ +DEDV+ LLQ L++M ++ + + TDIG+ V+ RKHPS+E+RR+ +
Sbjct: 119 ILTIKQQLENPQLSDEDVVDLLQTLADMDITFQALQDTDIGRHVNQLRKHPSSEVRRLVK 178
Query: 731 DLIGSWKNLADQWVSTT----NDGGNAAVADGESRPDRNGISRQNASQKYRGSYDSSSPL 898
L+ WK D WV ++ N AD +S ++QN + + S +P
Sbjct: 179 MLVRKWKGTVDDWVRLNPPEQHESANLIAADDDSPQQSVRRNQQNGNHQVPDFAYSPNP- 237
Query: 899 LRDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLADQSM 1078
RNG+ + + + P R L+ R +S
Sbjct: 238 ------RNGSSSSDRNN-SESEYKPKPVPQRNVTPTRPLQSAPKPASAPPPSRPPPRES- 289
Query: 1079 GNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTF-NYSRGGGQNRH 1252
+ ER+ S+++RL+ENYQ+ +NAKKQRT+Q+++ E KPKN F ++GG Q RH
Sbjct: 290 --AIDIERLNSARRRLQENYQEAQNAKKQRTIQVMDIHEIPKPKNGFIAKNKGGFQGRH 346
>ref|XP_002442867.1| hypothetical protein SORBIDRAFT_08g004100 [Sorghum bicolor]
gi|241943560|gb|EES16705.1| hypothetical protein
SORBIDRAFT_08g004100 [Sorghum bicolor]
Length = 348
Score = 148 bits (373), Expect = 8e-33
Identities = 100/360 (27%), Positives = 176/360 (48%), Gaps = 15/360 (4%)
Frame = +2
Query: 206 DIWAVINGAIALASLDYPEEFKEKRDKIAAQLY--SSRCHKCDANGTTTRVAASGTKTKP 379
D+W +++ A+A A+ D P E + +RD I +LY S+RC CDA+ A +P
Sbjct: 19 DVWDLVDAALAAAARDSPAELRARRDGIVQRLYAGSARCRNCDADAPPPPAA------QP 72
Query: 380 NQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXX-----CE 544
N G+ ++SP +P E
Sbjct: 73 N------------------------GAVAAAPAAASPASPDEEVDADSLDDEEEADAGVE 108
Query: 545 TELKEIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEIRRI 724
+++ I+ L DP Q+++++++LLQ L++M ++ + + TDIG+ V+ RKHPS+E+R++
Sbjct: 109 SKILAIKDFLEDPDQSEDEMVSLLQNLADMDITYKALQDTDIGRHVNGLRKHPSSEVRQL 168
Query: 725 ARDLIGSWKNLADQWVSTTNDGGN---AAVADGESRPDRNGISRQN---ASQKYRGSYDS 886
+ L+ WK + D WV N GG+ + ++DG+S QN + KY S S
Sbjct: 169 VKLLVRKWKEIVDDWVRLHNSGGDVGGSIISDGDSPDKVQPKYHQNTHASDFKYSSSPQS 228
Query: 887 SSPLLRDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLA 1066
+ L + + ++++ K + N + + N + A R ++N
Sbjct: 229 HNVLSSERSSNHNLVESAVEKRRTSPAPAYHNTKQNNSNNYPAVSSSAPARAMREQKN-- 286
Query: 1067 DQSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPK--NTFNYSRGGG 1240
+ +SE++ S+++RL+ENYQ+ +NAKKQRT+Q+++ + KPK NTF GGG
Sbjct: 287 -----TLLDSEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNTFIRKSGGG 341
>ref|XP_004502892.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cicer arietinum]
Length = 356
Score = 147 bits (371), Expect = 1e-32
Identities = 110/372 (29%), Positives = 181/372 (48%), Gaps = 21/372 (5%)
Frame = +2
Query: 203 VDIWAVINGAIALASLDYPEEFKEKRDKIAAQLYSSR-----CHKCDANGTTTRVAASGT 367
VD+W I+ AI++AS D E K +RD I +LY++ C CD G
Sbjct: 15 VDVWMFIDTAISVASQDNAAELKRRRDGIVERLYAATTSPPLCQNCDG----------GN 64
Query: 368 KTKPNQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITP------HXXXXXXXXX 529
+ NQ + H+R G +SSP TP +
Sbjct: 65 RQNINQ----IKKQSSPSLSPERQQHQRRGG------ASSPPTPQSLGNDNDDDEELDPY 114
Query: 530 XXXCETELK---EIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKH 700
E E K EI++LL DPRQ+++ +L LLQ L+++ ++ +++ +TDIG+ V+ RKH
Sbjct: 115 GGLFEDEQKKILEIKELLEDPRQSEDSLLELLQNLADIDITFQELKETDIGRNVNQLRKH 174
Query: 701 PSNEIRRIARDLIGSWKNLADQWVSTTNDGG-NAAVADGES---RPDRNGISRQNASQKY 868
PSN++RR+ + L+ WK + D+WV GG N +ADG+S + ++NG Q Y
Sbjct: 175 PSNDVRRLVKLLVKKWKEIVDEWVRLNPQGGNNTLMADGDSPLQKTNQNGHHHQIPDFAY 234
Query: 869 RGSYDSSSPLLRDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQG 1048
S +P NG +NS+ + P + +L+ +
Sbjct: 235 -----SPNP---HNGSSGSDRNNSEAE-----PKPKPKPVPRKEPPPKLKPSPPVTAPTS 281
Query: 1049 LKRNLADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNT---F 1219
+N + + ++ER+AS+++RL+ NY++ ENAKKQRT+Q+++ E K K+ F
Sbjct: 282 TLQNRQREQKESNFDAERLASARKRLQANYKEAENAKKQRTIQVMDIHELPKSKSKNVFF 341
Query: 1220 NYSRGGGQNRHR 1255
++GGG ++ R
Sbjct: 342 AKNKGGGSSQGR 353
>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
gi|449528150|ref|XP_004171069.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Cucumis sativus]
Length = 345
Score = 146 bits (369), Expect = 2e-32
Identities = 107/370 (28%), Positives = 176/370 (47%), Gaps = 12/370 (3%)
Frame = +2
Query: 179 KTIRISXEVDIWAVINGAIALASLDYPEEFKEKRDKIAAQLYS-----SRCHKCDANGTT 343
+TI + VD+W I+ A+ +ASLDY + K +RD I +LY+ SRC CD +
Sbjct: 10 RTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNCDTDRNH 69
Query: 344 TRVAASGTKTKPNQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXX 523
++G + K + G + + G
Sbjct: 70 DG-RSNGCEIKQGSGEVKEASPSTPQFVVVEGDDDGADPYAGLFDDE------------- 115
Query: 524 XXXXXCETELKEIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHP 703
+ ++ EI++ L P+Q ++ ++ LLQ L++M ++ + + +TDIG+ V+ RKHP
Sbjct: 116 ------QKKVLEIKEQLEIPQQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHP 169
Query: 704 SNEIRRIARDLIGSWKNLADQWVSTTNDGGNAA--VADGESRPDRNGISRQNASQKYRGS 877
SN++RR+ + L+ WK + D+WV G A +ADG+S + + QN +
Sbjct: 170 SNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQK---APQNGYHQVPDF 226
Query: 878 YDSSSPLLRDNGL-RNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLK 1054
S +P +G RN + KGK + R A + + L Q
Sbjct: 227 AYSPNPHNGGSGSDRNNSEPEPKGKSVPR---------RDALPKPTQQAPTSSLTPQ--N 275
Query: 1055 RNLADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTF----N 1222
R Q N +S+++AS+++RL+ENY++ ENAK+QRT+Q+++ E KPKN F
Sbjct: 276 RQKEQQKEANF-DSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNK 334
Query: 1223 YSRGGGQNRH 1252
S GG Q RH
Sbjct: 335 GSGGGSQGRH 344
>dbj|BAJ88583.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 347
Score = 146 bits (369), Expect = 2e-32
Identities = 107/354 (30%), Positives = 170/354 (48%), Gaps = 9/354 (2%)
Frame = +2
Query: 206 DIWAVINGAIALASLDYPEEFKEKRDKIAAQLYS-SRCHKCDANGTTTRVAASGTKTKPN 382
D+W +++ A+A+A+ P + + +RD I +LY+ SRC CDA + + P
Sbjct: 18 DVWDLVDAALAVAA---PADLRARRDGIVERLYAGSRCRNCDAPESPPQ--------PPR 66
Query: 383 QRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXXCETELKEI 562
Q V E E DG Q E+++ I
Sbjct: 67 QPAEAVSPAWQEEEEEAAA--EEEADVDGLGQEEE-----------IDDGAGLESKILAI 113
Query: 563 EQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEIRRIARDLIG 742
L DP Q++E++++LLQ L++M ++ + + +TDIG+ V+ RKHPS ++R++ + L+
Sbjct: 114 RDFLEDPDQSEEELVSLLQNLADMDITYKALQETDIGRHVNGLRKHPSGDVRQLVKLLVR 173
Query: 743 SWKNLADQWVSTTN---DGGNAAVADGESRPDRNGISRQNASQKYRGSYDSSSPLLRDNG 913
WK + D WV N DGGN+ + DG+S G S QNA + + SP R +G
Sbjct: 174 KWKEIVDGWVRLHNSGGDGGNSILTDGDSPEKTQGKSYQNA--RVSDFKYTPSPPQRHSG 231
Query: 914 LRNGALDNSKG---KVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLADQSMGN 1084
L + N+ G + + S P NG T + R D +
Sbjct: 232 LSSERSRNNNGFESTLERRRSSPAPMYHHTKQNNGNNYSTTSSSAPARAMREQKDNHL-- 289
Query: 1085 MSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKP--KNTFNYSRGGG 1240
E++ S+++RL+ENYQ+ +NAKKQRT+Q+L+ + KP KNTF GGG
Sbjct: 290 ---DEKLDSARKRLQENYQEAQNAKKQRTMQVLDIHDIPKPKNKNTFIRKPGGG 340
>ref|NP_001143340.1| uncharacterized protein LOC100275944 [Zea mays]
gi|195617136|gb|ACG30398.1| hypothetical protein [Zea
mays] gi|195618500|gb|ACG31080.1| hypothetical protein
[Zea mays]
Length = 357
Score = 145 bits (367), Expect = 4e-32
Identities = 97/355 (27%), Positives = 170/355 (47%), Gaps = 10/355 (2%)
Frame = +2
Query: 206 DIWAVINGAIALASLDYPEEFKEKRDKIAAQLYS--SRCHKCDANGTTTRVAASGTKTKP 379
D+W +++ A+A A+ D P + + +RD I +LY+ +RC CDA+ T A K
Sbjct: 17 DVWDLVDAALAAAARDSPGDLRARRDGIVQRLYAGAARCRNCDADATPA--PAQPRKAND 74
Query: 380 NQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXXCETELKE 559
E+E DG E+++
Sbjct: 75 AVAAAAAASPAAAAASAFPASPEQEVDADG------------LDDVDDAADAGMESKILA 122
Query: 560 IEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEIRRIARDLI 739
I L DP Q+++D+++LLQ L++M ++ + + TDIG+ V+ RKHPS+E+R++ + L+
Sbjct: 123 IRDFLEDPDQSEDDIVSLLQNLADMDITYKALQDTDIGRHVNGLRKHPSSEVRQLVKLLV 182
Query: 740 GSWKNLADQWVSTTNDGGNAA---VADGESRPDRNGISRQN---ASQKYRGSYDSSSPLL 901
WK + D WV N GG+ + ++DG+S QN + KY S +
Sbjct: 183 RKWKEIVDDWVRLHNSGGDGSGSIISDGDSPDKVQSKYHQNTHASDFKYPPSPQRHNVFS 242
Query: 902 RDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLADQSMG 1081
+ + ++++ K + + N + + N + A R ++N
Sbjct: 243 SERSSNHNLVESTTEKRRSSPAPAYNNTKQNNSNNYSSISSSAPARAIREQKN------- 295
Query: 1082 NMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPK--NTFNYSRGGG 1240
+ +SE++ S+++RL+ENYQ+ +NAKKQRT+Q+++ + KPK NTF GGG
Sbjct: 296 TLLDSEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNTFVRKSGGG 350
>ref|XP_003525100.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Glycine max]
Length = 313
Score = 145 bits (366), Expect = 5e-32
Identities = 107/371 (28%), Positives = 181/371 (48%), Gaps = 13/371 (3%)
Frame = +2
Query: 179 KTIRISXEVDIWAVINGAIALASLDYPEEFKEKRDKIAAQLYSS----RCHKCDANGTTT 346
++I S VD+WA+++ AIA+AS+D+P+E K +RD+I +LY+S +C CD N
Sbjct: 7 RSILESAGVDVWALMDAAIAVASVDHPDELKRRRDRIVERLYASSALPQCRNCDPNAGEI 66
Query: 347 RVAASGTKTKPNQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXX 526
R T++ P+ E + + G M
Sbjct: 67 R-----TQSSPSAE-------------------EEKDPYGGFMDEE-------------- 88
Query: 527 XXXXCETELKEIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPS 706
+ ++ I++ L DP Q+++ ++ LLQ L++M ++ + ++DIG+ V+ RKH S
Sbjct: 89 -----QKKILYIKEQLEDPHQSEDSLVELLQNLADMDITFPALEESDIGRYVNRLRKHSS 143
Query: 707 NEIRRIARDLIGSWKNLADQWVSTTNDG--GNAAVADGESRPDRNGISRQNASQKYRGSY 880
N+++R+ + L+ WK + D+WV + G G A +AD +S R QN ++
Sbjct: 144 NDVKRLVKLLVRKWKEIVDEWVKLKSPGYPGTAVMADEDSPQQR---ILQNGHRQIPDFA 200
Query: 881 DSSSPLLRDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRN 1060
S +P NG+ + SS N + + + R +A +
Sbjct: 201 YSPNP-------HNGS-----------SGSSQRNNIEAERKPKAIPRKEAPPKPSPSVTT 242
Query: 1061 LAD-----QSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTF-N 1222
A Q GN + +R AS+++RL+ENY++ NAKKQRT+Q+++ E KPKN F
Sbjct: 243 PASPPQNRQREGNF-DPDRFASARKRLQENYKEAANAKKQRTIQVMDLHELPKPKNAFLG 301
Query: 1223 YSRGG-GQNRH 1252
++GG GQ RH
Sbjct: 302 KNKGGTGQGRH 312
>gb|ACN28424.1| unknown [Zea mays] gi|413916220|gb|AFW56152.1| hypothetical protein
ZEAMMB73_157798 [Zea mays]
Length = 355
Score = 145 bits (366), Expect = 5e-32
Identities = 96/355 (27%), Positives = 170/355 (47%), Gaps = 8/355 (2%)
Frame = +2
Query: 206 DIWAVINGAIALASLDYPEEFKEKRDKIAAQLYS--SRCHKCDANGTTTRVAASGTKTKP 379
D+W +++ A+A A+ D P + + +RD I +LY+ +RC CDA+ T A K
Sbjct: 17 DVWDLVDAALAAAARDSPGDLRARRDGIVQRLYAGAARCRNCDADATP----APAQPRKA 72
Query: 380 NQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXXCETELKE 559
N + E+E DG E+++
Sbjct: 73 NDA-VAAAASPAAAASAFPASPEQEVDADG------------LDDVDDAADAGMESKILA 119
Query: 560 IEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEIRRIARDLI 739
I L DP Q+++D+++LLQ L++M ++ + + TDIG+ V+ RKHPS+E+R++ + L+
Sbjct: 120 IRDFLEDPDQSEDDIVSLLQNLADMDITYKALQDTDIGRHVNGLRKHPSSEVRQLVKLLV 179
Query: 740 GSWKNLADQWVSTTN---DGGNAAVADGESRPDRNGISRQN---ASQKYRGSYDSSSPLL 901
WK + D WV N DG + ++DG+S QN + KY S + L
Sbjct: 180 RKWKEIVDDWVRLHNSCGDGSGSIISDGDSPDKVQSKYHQNTHASDFKYPPSPQRHNVLS 239
Query: 902 RDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLADQSMG 1081
+ + ++++ K + N + + N + A R ++N
Sbjct: 240 SERSSNHNLVESTMEKRRTSPAPAYNNTKQNNSNNYSSISSSAPARAIREQKN------- 292
Query: 1082 NMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTFNYSRGGGQN 1246
+ +SE++ S+++RL+ENYQ+ +NAKKQRT+Q+++ + KPKN + R G +
Sbjct: 293 TLLDSEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNTFVRKSGSS 347
>ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|568820070|ref|XP_006464554.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Citrus sinensis] gi|557529863|gb|ESR41113.1|
hypothetical protein CICLE_v10025964mg [Citrus
clementina]
Length = 353
Score = 145 bits (365), Expect = 7e-32
Identities = 103/363 (28%), Positives = 174/363 (47%), Gaps = 13/363 (3%)
Frame = +2
Query: 203 VDIWAVINGAIALASLDYPEEFKEKRDKIAAQLYS----SRCHKCDANGTTTRVAASGTK 370
VD+W I+ AI +ASLDY E KE+RDKI +LY+ SRC CD V ++
Sbjct: 15 VDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGNGVVDVNKEISR 74
Query: 371 TKPNQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXXCETE 550
+ ++ + H G D +++ + I +
Sbjct: 75 GQHDEVKAAQQASPSTP-------HSVNGDDDIDIENDNDIIDPYGGLFDDE-----QKR 122
Query: 551 LKEIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEIRRIAR 730
+ EI++ L DP Q+++ ++ LLQ L++M ++ + + +TDIG+ V+ RKH SN++R++ +
Sbjct: 123 ILEIKEHLEDPDQSEDSLIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
Query: 731 DLIGSWKNLADQWVSTTNDG--GNAAVADGESRPDRNGISRQNASQKYRGSYDSSSPLLR 904
L+ WK++ D+WV G ++A+ DG+S + QN + + S +P
Sbjct: 183 HLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQK---IPQNGNHQVPDFAYSPNPHNG 239
Query: 905 DNGL-RNGALDNSKGKVT----NQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLAD 1069
+G +N + K K + +SS P ++R R +
Sbjct: 240 SSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQR----------PREQKE 289
Query: 1070 QSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTFNYSRGGG--Q 1243
R+AS+++RL+ENY++ ENAK+QRT+Q+++ E KPKN F GG Q
Sbjct: 290 SRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQ 349
Query: 1244 NRH 1252
RH
Sbjct: 350 GRH 352
>ref|XP_004977301.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X2 [Setaria italica]
Length = 344
Score = 144 bits (364), Expect = 9e-32
Identities = 98/360 (27%), Positives = 173/360 (48%), Gaps = 10/360 (2%)
Frame = +2
Query: 206 DIWAVINGAIALASLDYPEEFKEKRDKIAAQLYS-SRCHKCDANGTTTRVAASGTKTKPN 382
D+W +++ A+ A+ D P+E + +RD I +LY+ +RCH CDA G + P
Sbjct: 24 DVWDLVDAALTAAARDNPDELRARRDGIVERLYAGARCHNCDA----------GAPSPPQ 73
Query: 383 QRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXXXXXCETELKEI 562
R+ E + G + + E+++ I
Sbjct: 74 PRKAPEAAAAAEAVSPVSPDEEVDADGLGEDDDDAGV----------------ESKILAI 117
Query: 563 EQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNEIRRIARDLIG 742
L DP Q+++++++LLQ L++M ++ + + +TDIG+ V+ RKHPS E+R++ + L+
Sbjct: 118 RDFLEDPDQSEDEMVSLLQNLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVR 177
Query: 743 SWKNLADQWVSTTNDGGNAAVADGESRPD----RNGISRQNASQKYRGSYDSSSPLLRDN 910
WK + D WV N G DG+S PD +N S + + KY S S + +
Sbjct: 178 KWKEIVDDWVRLHNSAG-----DGDS-PDKVQPKNHQSTKASDFKYSPSPQSHNGFSSER 231
Query: 911 GLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNLADQSMGNMS 1090
+ +++++ K + N N N T + + L R + +Q +
Sbjct: 232 SIYQNSVESTMEKRRTSPAPAYHN--TKPNNNSNYSTTSSSV----LARTMREQKY-TLM 284
Query: 1091 ESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTFNYSR-----GGGQNRHR 1255
+ ++ S+++RL+ENYQ+ +NAKKQRT+Q+++ + KPKN + R GG RHR
Sbjct: 285 DPGKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNTFIRKSSGGGGLPARHR 344
>ref|XP_006581749.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X3 [Glycine max]
Length = 359
Score = 144 bits (363), Expect = 1e-31
Identities = 105/372 (28%), Positives = 179/372 (48%), Gaps = 22/372 (5%)
Frame = +2
Query: 203 VDIWAVINGAIALASLDYPEEFKEKRDKIAAQLYSS-----RCHKCDANGTTT------R 349
VD+W I+ AIA+AS D E K +RD I +LY++ +C CD G +
Sbjct: 15 VDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRICDDGGNDLNGHQIKK 74
Query: 350 VAASGTKTKPNQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSSSPITPHXXXXXXXXX 529
++ + +P+QRR ++ +G D + P+
Sbjct: 75 QSSPSPERQPHQRRAAAIAAAASPATPQSLENDNDGEED--------LDPYGGLFDDE-- 124
Query: 530 XXXCETELKEIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSN 709
+ ++ EI++ L +P Q+++ ++ LLQ L++M ++ + + +TDIG+ V+ RKHPSN
Sbjct: 125 ----QKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQALKETDIGRHVNRLRKHPSN 180
Query: 710 EIRRIARDLIGSWKNLADQWVSTTNDG-GNAAVADGESRPDRNGISRQNASQKYRGSYDS 886
++RR+ + L+ WK + D+WV G N +ADG+S P + + Q+ S
Sbjct: 181 DVRRLVKLLVRKWKEIVDEWVKLNPQGRSNTLMADGDSPPVQKTTQNGHHHQQIPDFAYS 240
Query: 887 SSPLLRDNGL-RNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRNL 1063
+P +G RN + K KV ++ P + + T R
Sbjct: 241 PNPHNGSSGSDRNNSEAEHKPKVVPRS-EPRPKPAPSPSVSTPASATQNRQRDSNF---- 295
Query: 1064 ADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQEC--SKPKNT--FNYSR 1231
++ER+AS+++RL+ENY++ E AK+QRT+Q+++ E SKPKN F ++
Sbjct: 296 ---------DAERLASARRRLQENYKEAEIAKRQRTIQVMDIHELPKSKPKNNAFFGKNK 346
Query: 1232 GGG-----QNRH 1252
GGG Q RH
Sbjct: 347 GGGGGGGSQGRH 358
>ref|XP_006851404.1| hypothetical protein AMTR_s00040p00061970 [Amborella trichopoda]
gi|548855098|gb|ERN12985.1| hypothetical protein
AMTR_s00040p00061970 [Amborella trichopoda]
Length = 330
Score = 141 bits (355), Expect = 9e-31
Identities = 107/335 (31%), Positives = 168/335 (50%), Gaps = 16/335 (4%)
Frame = +2
Query: 203 VDIWAVINGAIALASLDYPEEFKEKRDKIAAQLYSSR----CHKCDANGTTTRVAASGTK 370
+D+W I AI+LA +DY +EFK +RD IA +LY+S CH CD + R++ + K
Sbjct: 15 LDVWTAIESAISLAQMDYRDEFKVRRDGIAEKLYTSNSVVGCHNCDLD--LARLSTTKEK 72
Query: 371 TKPNQRRITVXXXXXXXXXXXXGHHEREGSHDGRMQSS-SPITP-----HXXXXXXXXXX 532
+ +R + H R+ +GR + P+ +
Sbjct: 73 CR-EERESSHDKGASPSTPQSLVHSHRDEEQNGREEEHREPVMKREEEGNRRDEEHGSHG 131
Query: 533 XXCETELKEIEQLLADPRQTDEDVLALLQRLSNMKMSVEDMMKTDIGKTVSAFRKHPSNE 712
+ +L I++ L DP Q+++ V+ LLQ L++M ++V+ + +TDIG+ V+ RKHPS E
Sbjct: 132 GLIQDKLLAIKEDLEDPDQSEDSVIDLLQSLTDMDVTVKALKETDIGRHVNGLRKHPSTE 191
Query: 713 IRRIARDLIGSWKNLADQWVSTTNDGGNAA-VADGESRPDRNGISR--QNASQKYRGSYD 883
+RR+ + LI WK L D+WVST +G AA VA+GES P +N +R QN +Q R S
Sbjct: 192 VRRLVKHLIRKWKELVDEWVSTAGEGAAAAIVAEGES-PQQNHQARASQNGNQ-VRESKH 249
Query: 884 SSSPLLRDNGL-RNGALDNSKGK--VTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLK 1054
S + +G+ N + SKGK + + PN + + Q K
Sbjct: 250 SPNGYSSGSGMGPNYSEIGSKGKGITPQREAQTKPNPI-----------APISIPAQKQK 298
Query: 1055 RNLADQSMGNMSESERIASSKQRLKENYQQVENAK 1159
N D +R+AS+++RL ENYQ+ EN +
Sbjct: 299 ENAID--------LQRLASARKRLHENYQEAENGE 325