BLASTX nr result

ID: Ephedra28_contig00013098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00013098
         (497 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39907.1| unknown [Picea sitchensis]                              60   3e-07
ref|XP_006836157.1| hypothetical protein AMTR_s00101p00040700 [A...    56   4e-06
ref|XP_004249359.1| PREDICTED: nucleolin-like isoform 1 [Solanum...    55   7e-06

>gb|ACN39907.1| unknown [Picea sitchensis]
          Length = 536

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 24/53 (45%), Positives = 42/53 (79%)
 Frame = -3

Query: 159 KRLYLYKVPEDIRPETLTMYFSQYGEIESGPHGYDKVSGKFKKEYAIIIFKSL 1
           +R+Y+  VP+D++P TLT +FS YG+IE GP G+D+ +GK  K Y++I+++++
Sbjct: 241 RRIYVGNVPDDMKPATLTSFFSNYGDIEEGPGGFDRNTGK-SKGYSLILYRTI 292


>ref|XP_006836157.1| hypothetical protein AMTR_s00101p00040700 [Amborella trichopoda]
           gi|548838657|gb|ERM99010.1| hypothetical protein
           AMTR_s00101p00040700 [Amborella trichopoda]
          Length = 441

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/53 (49%), Positives = 38/53 (71%)
 Frame = -3

Query: 162 GKRLYLYKVPEDIRPETLTMYFSQYGEIESGPHGYDKVSGKFKKEYAIIIFKS 4
           GK++Y+  V  DI P+ L  +FS++GEIE GP G DKV+GK  + +AI ++KS
Sbjct: 215 GKKIYVSNVASDITPQKLYAFFSRFGEIEEGPLGLDKVTGK-PRGFAIFVYKS 266


>ref|XP_004249359.1| PREDICTED: nucleolin-like isoform 1 [Solanum lycopersicum]
           gi|460407845|ref|XP_004249360.1| PREDICTED:
           nucleolin-like isoform 2 [Solanum lycopersicum]
          Length = 409

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/54 (46%), Positives = 39/54 (72%)
 Frame = -3

Query: 162 GKRLYLYKVPEDIRPETLTMYFSQYGEIESGPHGYDKVSGKFKKEYAIIIFKSL 1
           G+++Y+  V +D+  E L  +F+++GEIE GP G D VSGKF K +AI ++KS+
Sbjct: 197 GRKIYVGNVGQDVDGEKLRAFFAKFGEIEEGPSGIDSVSGKF-KGFAIFVYKSV 249


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