BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012946
         (2082 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266642.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   848   0.0  
emb|CBI27579.3| unnamed protein product [Vitis vinifera]              842   0.0  
ref|XP_006438086.1| hypothetical protein CICLE_v10030845mg [Citr...   841   0.0  
ref|XP_006484063.1| PREDICTED: probable pre-mRNA-splicing factor...   840   0.0  
gb|EOY00857.1| RNA helicase family protein isoform 1 [Theobroma ...   838   0.0  
gb|EOY00860.1| RNA helicase family protein isoform 4 [Theobroma ...   837   0.0  
ref|XP_004310054.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   830   0.0  
ref|XP_006845167.1| hypothetical protein AMTR_s00005p00234010 [A...   828   0.0  
ref|NP_564296.1| RNA helicase family protein [Arabidopsis thalia...   826   0.0  
ref|XP_002514958.1| ATP-dependent RNA helicase, putative [Ricinu...   825   0.0  
ref|XP_004979200.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   823   0.0  
gb|EOY00859.1| RNA helicase family protein isoform 3 [Theobroma ...   823   0.0  
gb|EEC68064.1| hypothetical protein OsI_35917 [Oryza sativa Indi...   823   0.0  
ref|XP_006415720.1| hypothetical protein EUTSA_v10006961mg [Eutr...   822   0.0  
ref|NP_001067756.2| Os11g0310800 [Oryza sativa Japonica Group] g...   821   0.0  
ref|XP_002436584.1| hypothetical protein SORBIDRAFT_10g005130 [S...   820   0.0  
ref|XP_006361550.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   819   0.0  
ref|XP_004239197.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   818   0.0  
ref|XP_006306906.1| hypothetical protein CARUB_v10008467mg [Caps...   817   0.0  
ref|XP_002314547.1| RNA helicase family protein [Populus trichoc...   817   0.0  

>ref|XP_002266642.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Vitis vinifera]
          Length = 700

 Score =  848 bits (2190), Expect = 0.0
 Identities = 433/666 (65%), Positives = 518/666 (77%), Gaps = 1/666 (0%)
 Frame = -1

Query: 2016 ELPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXX 1837
            +LPI  +E +I+  V+ NSV VIIGETGSGK+TQLSQIL R G++NSG + VTQP     
Sbjct: 3    KLPILQFEEKIIDIVEQNSVVVIIGETGSGKSTQLSQILYRRGYTNSGNVAVTQPRRVAA 62

Query: 1836 XXXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVII 1657
                     ELGV+LGEEVGY+IRFEDRTS +T IKYLTDG LLRE LS+  LS+YSVII
Sbjct: 63   VSVARRVAQELGVQLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSNPDLSQYSVII 122

Query: 1656 LDEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLF 1477
            LDEAHERS+NTDILLGLMK L++ R  +L+V+ITSATLDG K S FFS CP+L +PG+LF
Sbjct: 123  LDEAHERSLNTDILLGLMKRLVKMRASNLKVLITSATLDGSKVSRFFSNCPILTVPGKLF 182

Query: 1476 PVDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEE 1297
            PV+ILYS E P SYIESSL+TA+DIH+ +P+GD+L+FMTGQD+I+K+V+KLEER+++LEE
Sbjct: 183  PVEILYSAELPKSYIESSLKTAIDIHVREPEGDVLIFMTGQDDIEKLVVKLEERVRSLEE 242

Query: 1296 GLCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVK 1117
            G CMDAIILPLH SLPPELQVRVF+P PPNCRR IVATNIAETSLTVDG+VYVID G+VK
Sbjct: 243  GSCMDAIILPLHGSLPPELQVRVFSPPPPNCRRFIVATNIAETSLTVDGVVYVIDSGYVK 302

Query: 1116 QRQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQ 937
            QRQYNP TGM+SLD+++IS+VQANQRAGRAGRTRPGKCYRLYP  VY  + L  TVPEIQ
Sbjct: 303  QRQYNPLTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSMVYHDDFLDVTVPEIQ 362

Query: 936  RSSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRK 757
            RSSLA +V                   D PS ESL+DAL+QLYLIDAID +G IT +GR 
Sbjct: 363  RSSLAGSVLYLKSLDLPDIDILKFDFLDSPSSESLQDALRQLYLIDAIDENGSITSVGRT 422

Query: 756  MAELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLPD 577
            MAELPLE SL+R L+ ANE GCLSQALTVAAMLS E    P   K   KKR+   TDLPD
Sbjct: 423  MAELPLESSLSRMLMEANECGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPTDLPD 482

Query: 576  GKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLD 397
            G G GDHIQ LQI+E+W +T YDPNWCK  GLQVR MMF KDVR+QLS IMQK+ + SLD
Sbjct: 483  GSGWGDHIQLLQIFEQWDQTDYDPNWCKDHGLQVRGMMFVKDVRKQLSQIMQKMARGSLD 542

Query: 396  VNSKRSSSEKR-NFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQV 220
            V +K    E R +++ LRKALC G+A ++A+RM  HNGY+TL  KS+LVQVHPS+  L+ 
Sbjct: 543  VRAKERWKESRQDYKNLRKALCAGYAGQLAERMIHHNGYRTLGLKSQLVQVHPSSV-LRA 601

Query: 219  DEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLSRTSSSFGMEL 40
            DEDG+ P YVLY ELV T+RPY++N+CAVE +WV P+  KLE  +INKLS  S+   +E 
Sbjct: 602  DEDGMLPNYVLYHELVVTTRPYMRNVCAVEMSWVMPILKKLENLNINKLSGGSNQ--VED 659

Query: 39   NTEDNN 22
             TE+ +
Sbjct: 660  RTEEKS 665


>emb|CBI27579.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  842 bits (2175), Expect = 0.0
 Identities = 433/670 (64%), Positives = 518/670 (77%), Gaps = 5/670 (0%)
 Frame = -1

Query: 2016 ELPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXX 1837
            +LPI  +E +I+  V+ NSV VIIGETGSGK+TQLSQIL R G++NSG + VTQP     
Sbjct: 3    KLPILQFEEKIIDIVEQNSVVVIIGETGSGKSTQLSQILYRRGYTNSGNVAVTQPRRVAA 62

Query: 1836 XXXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVII 1657
                     ELGV+LGEEVGY+IRFEDRTS +T IKYLTDG LLRE LS+  LS+YSVII
Sbjct: 63   VSVARRVAQELGVQLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSNPDLSQYSVII 122

Query: 1656 LDEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLF 1477
            LDEAHERS+NTDILLGLMK L++ R  +L+V+ITSATLDG K S FFS CP+L +PG+LF
Sbjct: 123  LDEAHERSLNTDILLGLMKRLVKMRASNLKVLITSATLDGSKVSRFFSNCPILTVPGKLF 182

Query: 1476 PVDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEE 1297
            PV+ILYS E P SYIESSL+TA+DIH+ +P+GD+L+FMTGQD+I+K+V+KLEER+++LEE
Sbjct: 183  PVEILYSAELPKSYIESSLKTAIDIHVREPEGDVLIFMTGQDDIEKLVVKLEERVRSLEE 242

Query: 1296 GLCMDAIILPLHASLPPELQ----VRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDP 1129
            G CMDAIILPLH SLPPELQ    VRVF+P PPNCRR IVATNIAETSLTVDG+VYVID 
Sbjct: 243  GSCMDAIILPLHGSLPPELQASFFVRVFSPPPPNCRRFIVATNIAETSLTVDGVVYVIDS 302

Query: 1128 GFVKQRQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATV 949
            G+VKQRQYNP TGM+SLD+++IS+VQANQRAGRAGRTRPGKCYRLYP  VY  + L  TV
Sbjct: 303  GYVKQRQYNPLTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSMVYHDDFLDVTV 362

Query: 948  PEIQRSSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITE 769
            PEIQRSSLA +V                   D PS ESL+DAL+QLYLIDAID +G IT 
Sbjct: 363  PEIQRSSLAGSVLYLKSLDLPDIDILKFDFLDSPSSESLQDALRQLYLIDAIDENGSITS 422

Query: 768  IGRKMAELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVET 589
            +GR MAELPLE SL+R L+ ANE GCLSQALTVAAMLS E    P   K   KKR+   T
Sbjct: 423  VGRTMAELPLESSLSRMLMEANECGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPT 482

Query: 588  DLPDGKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTK 409
            DLPDG G GDHIQ LQI+E+W +T YDPNWCK  GLQVR MMF KDVR+QLS IMQK+ +
Sbjct: 483  DLPDGSGWGDHIQLLQIFEQWDQTDYDPNWCKDHGLQVRGMMFVKDVRKQLSQIMQKMAR 542

Query: 408  ESLDVNSKRSSSEKR-NFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSAC 232
             SLDV +K    E R +++ LRKALC G+A ++A+RM  HNGY+TL  KS+LVQVHPS+ 
Sbjct: 543  GSLDVRAKERWKESRQDYKNLRKALCAGYAGQLAERMIHHNGYRTLGLKSQLVQVHPSSV 602

Query: 231  PLQVDEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLSRTSSSF 52
             L+ DEDG+ P YVLY ELV T+RPY++N+CAVE +WV P+  KLE  +INKLS  S+  
Sbjct: 603  -LRADEDGMLPNYVLYHELVVTTRPYMRNVCAVEMSWVMPILKKLENLNINKLSGGSNQ- 660

Query: 51   GMELNTEDNN 22
             +E  TE+ +
Sbjct: 661  -VEDRTEEKS 669


>ref|XP_006438086.1| hypothetical protein CICLE_v10030845mg [Citrus clementina]
            gi|567891137|ref|XP_006438089.1| hypothetical protein
            CICLE_v10030845mg [Citrus clementina]
            gi|557540282|gb|ESR51326.1| hypothetical protein
            CICLE_v10030845mg [Citrus clementina]
            gi|557540285|gb|ESR51329.1| hypothetical protein
            CICLE_v10030845mg [Citrus clementina]
          Length = 704

 Score =  841 bits (2173), Expect = 0.0
 Identities = 425/649 (65%), Positives = 506/649 (77%), Gaps = 1/649 (0%)
 Frame = -1

Query: 2013 LPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXXX 1834
            LPI  YE +IV+ VK N V V+IGETGSGK+TQLSQIL RHG++ SGIIGVTQP      
Sbjct: 4    LPILQYEEKIVETVKQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63

Query: 1833 XXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVIIL 1654
                    ELGVRLGEEVGY+IRFEDRTS +T+IKYLTDG LLRE LS+  LS YSVIIL
Sbjct: 64   SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123

Query: 1653 DEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLFP 1474
            DEAHERS+NTDILLGL+K L+  R   L+++ITSATLDG+K S FFS CP LN+PG+L+P
Sbjct: 124  DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183

Query: 1473 VDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEEG 1294
            V+IL+S E+P SY+ES+L+TA+DIH+ +P+GD+L+FMTGQD+I+K+V KLE++IQ+L+EG
Sbjct: 184  VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIQSLDEG 243

Query: 1293 LCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVKQ 1114
             CMDA+ILPLH SLPPE+QVRVF+P PPNCRR IV+TNIAETSLTVDG+VYVID G+VKQ
Sbjct: 244  SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303

Query: 1113 RQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQR 934
            RQYNP +GM+SLD+++IS+VQANQR GRAGRTRPGKCYRLYP +VY  E L  TVPEIQR
Sbjct: 304  RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363

Query: 933  SSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRKM 754
            SSLA +V                   D PS ESLEDALKQLYLIDAID +G IT IGR M
Sbjct: 364  SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423

Query: 753  AELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLPDG 574
            AELPLEPSL+R L+ ANE GCLSQALTVAAMLS E    P   K   KKR+    +LPDG
Sbjct: 424  AELPLEPSLSRMLMEANEYGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPDG 483

Query: 573  KGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLDV 394
             G GDHIQ LQIYE W    YD NW K  GLQVR MMF KD+R+QL  IMQK+ K SLDV
Sbjct: 484  SGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGSLDV 543

Query: 393  NSKRSSSEKR-NFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQVD 217
             +     E R ++R+LRKALC G+AN++A+RM  HNGY+TL +K +LVQVHPS+  L+ D
Sbjct: 544  RANHRWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSS-ELKTD 602

Query: 216  EDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLS 70
            E+GL P YV+Y EL+ATSRPY++N+CAVE  WV P+  KLEK DINKLS
Sbjct: 603  EEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKLEKIDINKLS 651


>ref|XP_006484063.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform X1 [Citrus sinensis]
          Length = 704

 Score =  840 bits (2169), Expect = 0.0
 Identities = 424/649 (65%), Positives = 506/649 (77%), Gaps = 1/649 (0%)
 Frame = -1

Query: 2013 LPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXXX 1834
            LPI  YE +IV+ V+ N V V+IGETGSGK+TQLSQIL RHG++ SGIIGVTQP      
Sbjct: 4    LPILQYEEKIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63

Query: 1833 XXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVIIL 1654
                    ELGVRLGEEVGY+IRFEDRTS +T+IKYLTDG LLRE LS+  LS YSVIIL
Sbjct: 64   SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123

Query: 1653 DEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLFP 1474
            DEAHERS+NTDILLGL+K L+  R   L+++ITSATLDG+K S FFS CP LN+PG+L+P
Sbjct: 124  DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183

Query: 1473 VDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEEG 1294
            V+IL+S E+P SY+ES+L+TA+DIH+ +P+GD+L+FMTGQD+I+K+V KLE++IQ+L+EG
Sbjct: 184  VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIQSLDEG 243

Query: 1293 LCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVKQ 1114
             CMDA+ILPLH SLPPE+QVRVF+P PPNCRR IV+TNIAETSLTVDG+VYVID G+VKQ
Sbjct: 244  SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303

Query: 1113 RQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQR 934
            RQYNP +GM+SLD+++IS+VQANQR GRAGRTRPGKCYRLYP +VY  E L  TVPEIQR
Sbjct: 304  RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363

Query: 933  SSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRKM 754
            SSLA +V                   D PS ESLEDALKQLYLIDAID +G IT IGR M
Sbjct: 364  SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423

Query: 753  AELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLPDG 574
            AELPLEPSL+R L+ ANE GCLSQALTVAAMLS E    P   K   KKR+    +LPDG
Sbjct: 424  AELPLEPSLSRMLMEANEYGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPDG 483

Query: 573  KGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLDV 394
             G GDHIQ LQIYE W    YD NW K  GLQVR MMF KD+R+QL  IMQK+ K SLDV
Sbjct: 484  SGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGSLDV 543

Query: 393  NSKRSSSEKR-NFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQVD 217
             +     E R ++R+LRKALC G+AN++A+RM  HNGY+TL +K +LVQVHPS+  L+ D
Sbjct: 544  RANHRWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSS-ELKTD 602

Query: 216  EDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLS 70
            E+GL P YV+Y EL+ATSRPY++N+CAVE  WV P+  KLEK DINKLS
Sbjct: 603  EEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKLEKIDINKLS 651


>gb|EOY00857.1| RNA helicase family protein isoform 1 [Theobroma cacao]
            gi|508708961|gb|EOY00858.1| RNA helicase family protein
            isoform 1 [Theobroma cacao]
          Length = 700

 Score =  838 bits (2165), Expect = 0.0
 Identities = 422/648 (65%), Positives = 507/648 (78%)
 Frame = -1

Query: 2013 LPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXXX 1834
            LPI  +E +I++ V+ N V VIIGETGSGK+TQLSQ+L R G+++SGI+ VTQP      
Sbjct: 4    LPIVQFEKKIIETVEQNPVVVIIGETGSGKSTQLSQMLHRKGYTDSGIVAVTQPRRVAAV 63

Query: 1833 XXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVIIL 1654
                    ELGVRLGEEVGY+IRFEDRTS +T IKYLTDG LLRE LS+  L++YSVIIL
Sbjct: 64   SVSRRVAQELGVRLGEEVGYAIRFEDRTSERTQIKYLTDGVLLRESLSNPELNQYSVIIL 123

Query: 1653 DEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLFP 1474
            DEAHERS+NTDILLGLMK L+  R  +L+V+ITSATLDG+K S FFS CP+L +PG+LFP
Sbjct: 124  DEAHERSLNTDILLGLMKRLVGSRASNLKVLITSATLDGEKVSKFFSDCPLLTVPGKLFP 183

Query: 1473 VDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEEG 1294
            V+I YS E+P SY+ESSL+TALDIH+ +P+GD+L+FMTGQD+I+K+VLKLE+++++LEEG
Sbjct: 184  VEIFYSKERPTSYVESSLKTALDIHVREPEGDVLIFMTGQDDIEKLVLKLEDKVRSLEEG 243

Query: 1293 LCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVKQ 1114
             CMDAIILPLH SLPPE+QVRVF+P PPNCRR IVATNIAETSLTVDG+VYVID G+VKQ
Sbjct: 244  SCMDAIILPLHGSLPPEMQVRVFSPPPPNCRRFIVATNIAETSLTVDGVVYVIDSGYVKQ 303

Query: 1113 RQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQR 934
            RQYNP TGM+SLD++++S+VQANQRAGRAGRTRPGKCYRLYP  VY  E L  TVPEIQR
Sbjct: 304  RQYNPATGMYSLDVVQVSKVQANQRAGRAGRTRPGKCYRLYPSRVYNDEFLDVTVPEIQR 363

Query: 933  SSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRKM 754
            SSLA TV                   D PS ESLEDALKQLYLIDAID +G IT +GR M
Sbjct: 364  SSLAGTVLYLKSLDLPDIDILKFDFLDPPSTESLEDALKQLYLIDAIDENGSITSVGRTM 423

Query: 753  AELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLPDG 574
            AELPLEPSL+R LI ANE GCLSQALTVAAMLS E    P   K   KKR+    DLPDG
Sbjct: 424  AELPLEPSLSRTLIEANEYGCLSQALTVAAMLSAETNLLPNRSKSNEKKRKHPPLDLPDG 483

Query: 573  KGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLDV 394
             G GDHIQ LQI+E W    YD  WCK   LQVR M+F K+VR+QLS IMQK+ K S DV
Sbjct: 484  SGFGDHIQLLQIFECWDENDYDIGWCKYYDLQVRGMLFVKEVRKQLSQIMQKIAKGSSDV 543

Query: 393  NSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQVDE 214
             + +S    +N+R LRKALC G+A+++A+RM  HNGY+TL +KS+LVQVHPS+  LQ D+
Sbjct: 544  QANQSRKGHQNYRNLRKALCIGYASQLAERMRHHNGYRTLGFKSQLVQVHPSSV-LQPDD 602

Query: 213  DGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLS 70
            DGLY  YV+Y EL++TSRPY++N+CAVE  WV P+ DKLEK +++KLS
Sbjct: 603  DGLYGSYVVYHELISTSRPYMRNVCAVERQWVMPILDKLEKLNVSKLS 650


>gb|EOY00860.1| RNA helicase family protein isoform 4 [Theobroma cacao]
          Length = 650

 Score =  837 bits (2161), Expect = 0.0
 Identities = 421/647 (65%), Positives = 506/647 (78%)
 Frame = -1

Query: 2013 LPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXXX 1834
            LPI  +E +I++ V+ N V VIIGETGSGK+TQLSQ+L R G+++SGI+ VTQP      
Sbjct: 4    LPIVQFEKKIIETVEQNPVVVIIGETGSGKSTQLSQMLHRKGYTDSGIVAVTQPRRVAAV 63

Query: 1833 XXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVIIL 1654
                    ELGVRLGEEVGY+IRFEDRTS +T IKYLTDG LLRE LS+  L++YSVIIL
Sbjct: 64   SVSRRVAQELGVRLGEEVGYAIRFEDRTSERTQIKYLTDGVLLRESLSNPELNQYSVIIL 123

Query: 1653 DEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLFP 1474
            DEAHERS+NTDILLGLMK L+  R  +L+V+ITSATLDG+K S FFS CP+L +PG+LFP
Sbjct: 124  DEAHERSLNTDILLGLMKRLVGSRASNLKVLITSATLDGEKVSKFFSDCPLLTVPGKLFP 183

Query: 1473 VDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEEG 1294
            V+I YS E+P SY+ESSL+TALDIH+ +P+GD+L+FMTGQD+I+K+VLKLE+++++LEEG
Sbjct: 184  VEIFYSKERPTSYVESSLKTALDIHVREPEGDVLIFMTGQDDIEKLVLKLEDKVRSLEEG 243

Query: 1293 LCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVKQ 1114
             CMDAIILPLH SLPPE+QVRVF+P PPNCRR IVATNIAETSLTVDG+VYVID G+VKQ
Sbjct: 244  SCMDAIILPLHGSLPPEMQVRVFSPPPPNCRRFIVATNIAETSLTVDGVVYVIDSGYVKQ 303

Query: 1113 RQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQR 934
            RQYNP TGM+SLD++++S+VQANQRAGRAGRTRPGKCYRLYP  VY  E L  TVPEIQR
Sbjct: 304  RQYNPATGMYSLDVVQVSKVQANQRAGRAGRTRPGKCYRLYPSRVYNDEFLDVTVPEIQR 363

Query: 933  SSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRKM 754
            SSLA TV                   D PS ESLEDALKQLYLIDAID +G IT +GR M
Sbjct: 364  SSLAGTVLYLKSLDLPDIDILKFDFLDPPSTESLEDALKQLYLIDAIDENGSITSVGRTM 423

Query: 753  AELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLPDG 574
            AELPLEPSL+R LI ANE GCLSQALTVAAMLS E    P   K   KKR+    DLPDG
Sbjct: 424  AELPLEPSLSRTLIEANEYGCLSQALTVAAMLSAETNLLPNRSKSNEKKRKHPPLDLPDG 483

Query: 573  KGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLDV 394
             G GDHIQ LQI+E W    YD  WCK   LQVR M+F K+VR+QLS IMQK+ K S DV
Sbjct: 484  SGFGDHIQLLQIFECWDENDYDIGWCKYYDLQVRGMLFVKEVRKQLSQIMQKIAKGSSDV 543

Query: 393  NSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQVDE 214
             + +S    +N+R LRKALC G+A+++A+RM  HNGY+TL +KS+LVQVHPS+  LQ D+
Sbjct: 544  QANQSRKGHQNYRNLRKALCIGYASQLAERMRHHNGYRTLGFKSQLVQVHPSSV-LQPDD 602

Query: 213  DGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKL 73
            DGLY  YV+Y EL++TSRPY++N+CAVE  WV P+ DKLEK +++KL
Sbjct: 603  DGLYGSYVVYHELISTSRPYMRNVCAVERQWVMPILDKLEKLNVSKL 649


>ref|XP_004310054.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Fragaria vesca
            subsp. vesca]
          Length = 698

 Score =  830 bits (2145), Expect = 0.0
 Identities = 420/669 (62%), Positives = 519/669 (77%), Gaps = 1/669 (0%)
 Frame = -1

Query: 2016 ELPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXX 1837
            ELPI  +E +I++ V+++ V VIIGETGSGK+TQLSQ+L R G++NSGI+GVTQP     
Sbjct: 3    ELPILQFEEKIIETVQNSPVVVIIGETGSGKSTQLSQMLHRRGYTNSGIVGVTQPRRVAA 62

Query: 1836 XXXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVII 1657
                     EL VRLG+EVGY+IRFEDRTS +T IKYLTDG LLRE LS+  L +YSVII
Sbjct: 63   VSVARRVSQELNVRLGDEVGYAIRFEDRTSDRTRIKYLTDGVLLRESLSNPELDQYSVII 122

Query: 1656 LDEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLF 1477
            LDEAHERS+NTDILLGLMK L++RR  +L+V++TSATLDGDK S FFS CPVLN+PG+L+
Sbjct: 123  LDEAHERSLNTDILLGLMKRLVKRRASNLKVIVTSATLDGDKVSQFFSNCPVLNVPGKLY 182

Query: 1476 PVDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEE 1297
            PV+ILYS E+P SY+E+SL+TALDIH+ +P+GD+L+FMTGQD+I+K+V KLE+R+++LEE
Sbjct: 183  PVEILYSNERPKSYLEASLKTALDIHIKEPEGDVLIFMTGQDDIEKLVSKLEDRVRSLEE 242

Query: 1296 GLCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVK 1117
            G  +DAIILPLH SL PE+QVRVF+P PPNCRR IVATNIAETSLTVDG+VYVID G+VK
Sbjct: 243  GSVLDAIILPLHGSLQPEMQVRVFSPPPPNCRRFIVATNIAETSLTVDGVVYVIDSGYVK 302

Query: 1116 QRQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQ 937
            QRQYNP TGM+SLD+++IS+VQANQRAGRAGRTRPGKCYRLYP   Y  ELL ATVPEIQ
Sbjct: 303  QRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSIDYHEELLDATVPEIQ 362

Query: 936  RSSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRK 757
            RSSLA +V                   D PS ESL+DALKQLYLIDAID DG IT +G+ 
Sbjct: 363  RSSLAGSVLYLKSLDLPDIDILKFDFLDSPSSESLQDALKQLYLIDAIDEDGLITRVGKT 422

Query: 756  MAELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLPD 577
            MAELPLEPSL+R L+ AN+ GCLSQALTVAAMLS E    P   K   KKR+    DLPD
Sbjct: 423  MAELPLEPSLSRTLMEANDNGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHDHLDLPD 482

Query: 576  GKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLD 397
            G G GDHIQ LQIYE WH+THY+ +WCK  GLQVR M F KDVR+QL  IMQK+ K SLD
Sbjct: 483  GSGWGDHIQLLQIYECWHQTHYNIDWCKDRGLQVRGMTFVKDVRKQLCQIMQKVAKGSLD 542

Query: 396  V-NSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQV 220
            V  S+R    ++++  LRKALC G+AN++A+RM  HNGY+TL +K ++VQVHPS+  L+ 
Sbjct: 543  VQTSRRGKETQQDYNNLRKALCVGYANQLAERMVFHNGYRTLGFKPQVVQVHPSSV-LKP 601

Query: 219  DEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLSRTSSSFGMEL 40
            D++G +P YV+Y EL+AT+RPY++ +CAV  +WV P+ +K+   +INKLS    S  +E 
Sbjct: 602  DDEGKFPNYVVYQELIATTRPYLRTVCAVNVSWVAPILNKVNNLNINKLSGGIDS--IEE 659

Query: 39   NTEDNNVSV 13
            + E N  S+
Sbjct: 660  HAEGNLASL 668


>ref|XP_006845167.1| hypothetical protein AMTR_s00005p00234010 [Amborella trichopoda]
            gi|548847680|gb|ERN06842.1| hypothetical protein
            AMTR_s00005p00234010 [Amborella trichopoda]
          Length = 707

 Score =  828 bits (2138), Expect = 0.0
 Identities = 429/650 (66%), Positives = 504/650 (77%), Gaps = 1/650 (0%)
 Frame = -1

Query: 2016 ELPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXX 1837
            +LPI  +E EIV+ V+ N V VIIGETGSGK+TQLSQIL RHG+++ G I VTQP     
Sbjct: 4    KLPICKFEEEIVKVVRENPVVVIIGETGSGKSTQLSQILDRHGYTDRGAIAVTQPRRVAA 63

Query: 1836 XXXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVII 1657
                     ELGV+LGEEVGY+IRFEDRTS KT IKYLTDGCLLRE LSD  L +YSVII
Sbjct: 64   VSVSRRVAHELGVQLGEEVGYAIRFEDRTSDKTRIKYLTDGCLLRENLSDPELKQYSVII 123

Query: 1656 LDEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLF 1477
            LDEAHERS+NTDILLGLMK+L+R R  DLRV+ITSATLDG K S+FFS CP+L +PG+LF
Sbjct: 124  LDEAHERSLNTDILLGLMKHLVRVRHLDLRVIITSATLDGAKVSNFFSDCPILAVPGKLF 183

Query: 1476 PVDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEE 1297
            PV+I YS+E P +YIESSL++A+DIH+ +P GD+LLFMTGQ++I+K V KLEERI++LEE
Sbjct: 184  PVEIFYSSEPPKNYIESSLKSAIDIHVKEPPGDVLLFMTGQEDIEKTVSKLEERIRSLEE 243

Query: 1296 GLCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVK 1117
            G CM AIILPLH SLPPE+QVRVF PAP NCRR IVATNIAETSLTVDG+VYVID G+VK
Sbjct: 244  GSCMGAIILPLHGSLPPEMQVRVFQPAPQNCRRFIVATNIAETSLTVDGVVYVIDSGYVK 303

Query: 1116 QRQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQ 937
            QR YNP  GM+SLDI++ISRVQA+QRAGRAGRT PGKCYRLYP S+Y  ELL ATVPEIQ
Sbjct: 304  QRYYNPSKGMYSLDIVKISRVQADQRAGRAGRTCPGKCYRLYPSSMYYGELLEATVPEIQ 363

Query: 936  RSSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRK 757
            RSSLA +V                   D+PS  SLEDALKQLYLIDAID +G IT++G+ 
Sbjct: 364  RSSLAGSVLYLKSLDLRDIDVLQFDFLDRPSPLSLEDALKQLYLIDAIDENGSITKVGQL 423

Query: 756  MAELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLPD 577
            MAELPLEPSLAR LIAANE GCL +ALTVAAMLS +    P N K   KKR+++ T+LP+
Sbjct: 424  MAELPLEPSLARTLIAANEFGCLPEALTVAAMLSTDTFLLPSNSKGGEKKRKQIITNLPN 483

Query: 576  GKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLD 397
            G G GDHIQ LQIY  WH+  YDP WCK  GL VRSM+FA+DVRRQL  IMQK+ K  LD
Sbjct: 484  GSGWGDHIQLLQIYNTWHQMDYDPRWCKDNGLHVRSMIFARDVRRQLCQIMQKMAKGPLD 543

Query: 396  VNSKRSSSE-KRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQV 220
            V + R +SE  R++  LRKAL  GFANRIA+RM  HNGY+TL YKS LVQVHPS C L+ 
Sbjct: 544  VRADRRASEIDRDYTSLRKALSIGFANRIAERMLHHNGYRTLGYKSELVQVHPS-CVLKS 602

Query: 219  DEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLS 70
             + GL P+YV+Y EL+AT R  ++N+CAVE  WV P++ KL   D+ KLS
Sbjct: 603  GDSGLLPDYVVYNELLATPRLVLRNVCAVEMPWVTPIFGKLGNLDVKKLS 652


>ref|NP_564296.1| RNA helicase family protein [Arabidopsis thaliana]
            gi|15451224|gb|AAK96883.1| ATP-dependent RNA helicase,
            putative [Arabidopsis thaliana]
            gi|22136080|gb|AAM91118.1| ATP-dependent RNA helicase,
            putative [Arabidopsis thaliana]
            gi|332192768|gb|AEE30889.1| RNA helicase family protein
            [Arabidopsis thaliana]
          Length = 700

 Score =  826 bits (2133), Expect = 0.0
 Identities = 415/650 (63%), Positives = 514/650 (79%), Gaps = 2/650 (0%)
 Frame = -1

Query: 2013 LPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXXX 1834
            LPI  +E +IV+ V+ NSV VIIGETGSGK+TQLSQIL RHG++ SG+I +TQP      
Sbjct: 4    LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAV 63

Query: 1833 XXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVIIL 1654
                    EL V LGE+VGY+IRFEDRT+SKT IKYLTDG LLRE LS+  L  YSVIIL
Sbjct: 64   SVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIIL 123

Query: 1653 DEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLFP 1474
            DEAHERS+NTDILLGL+K L+R R  + +V+ITSATLDG+K S+FFS CPVLN+PG+L+P
Sbjct: 124  DEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYP 183

Query: 1473 VDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEEG 1294
            V+ILYS E+PVSYIESSL+ A+DIH+ +P+GDIL+FMTGQD+I+K+V +LEE++++L EG
Sbjct: 184  VEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEG 243

Query: 1293 LCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVKQ 1114
             CMDAII PLH SLPPE+QVRVF+P PPNCRR IV+TNIAETSLTVDG+VYVID G+VKQ
Sbjct: 244  SCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQ 303

Query: 1113 RQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQR 934
            RQYNP +GMFSLD+++IS+VQANQRAGRAGRTRPGKCYRLYP +VY  + L AT+PEIQR
Sbjct: 304  RQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQR 363

Query: 933  SSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRKM 754
            +SLA +V                   D PS ESLEDALKQLY IDAID +G IT IGR M
Sbjct: 364  TSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRTM 423

Query: 753  AELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVE-TDLPD 577
            ++LPLEPSL+R LI ANE GCLSQALTV AMLS E    P   K + KKR+  E ++LP+
Sbjct: 424  SDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSNLPN 483

Query: 576  GKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLD 397
            G G GDHIQ LQI+E W RT+YDP WCK+ G+QVR M+F KDVRRQL  IMQK++K+ L+
Sbjct: 484  GSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLE 543

Query: 396  VNSK-RSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQV 220
            V +  R SS + ++R+LRKALC G AN+IA+RM RHNGY+TL ++S+LVQVHPS+  L  
Sbjct: 544  VGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQSQLVQVHPSSV-LSA 602

Query: 219  DEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLS 70
            D DG+ P YV+Y EL++T+RP+++N+CAV+ AWV P+  K+EK ++ KLS
Sbjct: 603  DNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWVAPIKRKIEKLNVRKLS 652


>ref|XP_002514958.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223546009|gb|EEF47512.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 702

 Score =  825 bits (2132), Expect = 0.0
 Identities = 422/672 (62%), Positives = 516/672 (76%), Gaps = 2/672 (0%)
 Frame = -1

Query: 2013 LPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXXX 1834
            LPI  +E +I++ V+ N V VIIGETGSGK+TQLSQ+L R G++ SGIIG+TQP      
Sbjct: 4    LPIIQFEDKIIKTVEENPVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGITQPRRVAAV 63

Query: 1833 XXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVIIL 1654
                    ELGV LGEEVGY+IRFEDRTS  T IKYLTDG LLRE LS   L++YSVIIL
Sbjct: 64   SVARRVAQELGVTLGEEVGYAIRFEDRTSELTRIKYLTDGVLLRESLSGPELNQYSVIIL 123

Query: 1653 DEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLFP 1474
            DEAHERS+NTD+LLGL+K L++ R  +L+V+ITSATLDG+K S+FFS CP+LN+PG+L+P
Sbjct: 124  DEAHERSLNTDVLLGLVKRLVKLRASNLKVLITSATLDGEKVSEFFSGCPILNVPGKLYP 183

Query: 1473 VDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEEG 1294
            V+I+YS E+P SYIES+L+TA+DIH  +P+GDIL+FMTGQD+I+K+V+KLE+RI++LEEG
Sbjct: 184  VEIMYSKERPTSYIESALKTAIDIHTREPEGDILIFMTGQDDIEKLVMKLEDRIRSLEEG 243

Query: 1293 LCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVKQ 1114
             CMDAIILPLH SLPP+LQVRVF P PPNCRR IVATNIAETSLTVDG+VYV+D G+VKQ
Sbjct: 244  SCMDAIILPLHGSLPPDLQVRVFAPPPPNCRRFIVATNIAETSLTVDGVVYVVDSGYVKQ 303

Query: 1113 RQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQR 934
            RQYNP TGM+SLD+++IS+VQANQRAGRAGRTRPGKCYRLYP  VYE + L  TVPEIQR
Sbjct: 304  RQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSMVYEDDFLDVTVPEIQR 363

Query: 933  SSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRKM 754
            SSLA +V                   D PS ESLEDALKQLYLIDAID +G IT +GR M
Sbjct: 364  SSLAGSVLYLKSLDLPDIDILKFDFLDPPSYESLEDALKQLYLIDAIDENGSITSVGRTM 423

Query: 753  AELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERV--ETDLP 580
            AELPLEPSL+R L+ ANE GCLSQALTVAAMLS E    P   +   KKR+    E DLP
Sbjct: 424  AELPLEPSLSRTLMEANENGCLSQALTVAAMLSAETTLLPSRSRTTEKKRKHTSFEFDLP 483

Query: 579  DGKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESL 400
            DG GLGDHIQ LQI+ +W    YD +WCK+ GLQVR M F KDVR+QL  IMQK+ K SL
Sbjct: 484  DGCGLGDHIQLLQIFLDWDENDYDIDWCKENGLQVRGMKFVKDVRKQLCQIMQKIAKGSL 543

Query: 399  DVNSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQV 220
            DV +     E+  ++ LRKALC G+AN++A+RM  HNGY+T+ +K +LVQVHPS+  L+ 
Sbjct: 544  DVRAGCKKREE-EYKNLRKALCAGYANQLAERMVHHNGYRTIGFKHQLVQVHPSSV-LRS 601

Query: 219  DEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLSRTSSSFGMEL 40
            DE G++P ++LY EL+ATSRPY++N+CAVE +WV PV +KL+K +INKLS      G+  
Sbjct: 602  DEYGMFPNFILYHELIATSRPYMRNVCAVENSWVDPVLEKLKKLNINKLSG-----GLGQ 656

Query: 39   NTEDNNVSVISE 4
               D N   IS+
Sbjct: 657  IARDGNEGKISD 668


>ref|XP_004979200.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Setaria italica]
          Length = 701

 Score =  823 bits (2127), Expect = 0.0
 Identities = 420/654 (64%), Positives = 507/654 (77%)
 Frame = -1

Query: 2019 PELPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXX 1840
            P LPI+ +E EIV AV  N V V+IGETGSGK+TQLSQIL R G++  G I VTQP    
Sbjct: 7    PVLPISEHEDEIVAAVDTNPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQPRRVA 66

Query: 1839 XXXXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVI 1660
                      ELGV LG+EVGY+IRFEDRTS +T IKYLTDG LLRE LS+  L +YSVI
Sbjct: 67   AVSVSRRVAQELGVPLGDEVGYAIRFEDRTSERTCIKYLTDGVLLRESLSNPDLKQYSVI 126

Query: 1659 ILDEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRL 1480
            ILDEAHERS+NTDILLGLMK L++ R  DL+V+ITSATLDG K S FFS CPVLNIPG L
Sbjct: 127  ILDEAHERSLNTDILLGLMKRLVKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTL 186

Query: 1479 FPVDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLE 1300
            FPV+  YSTE+P +YIESSL+TA+DIH  +P GD+L+FMTG+D+IDK+V KLEERIQNLE
Sbjct: 187  FPVEKFYSTERPTNYIESSLRTAIDIHAKEPPGDVLIFMTGKDDIDKMVSKLEERIQNLE 246

Query: 1299 EGLCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFV 1120
            EG CMDA++LPLH SLPPELQVRVF PAPPNCRR IVATN+AETSLTVDG+V+VID G+V
Sbjct: 247  EGSCMDALVLPLHGSLPPELQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGYV 306

Query: 1119 KQRQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEI 940
            KQRQYNP +GM+SLD+++ISRVQA+QRAGRAGRTRPGKCYRLYP S+Y+ E L ATVPEI
Sbjct: 307  KQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPMSIYQKEFLEATVPEI 366

Query: 939  QRSSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGR 760
            QRSSLA +V                   D PSRESLEDAL+QLYLIDAID +G+IT++GR
Sbjct: 367  QRSSLAGSVLYLKSLNLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDVGR 426

Query: 759  KMAELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLP 580
             MAELPLEPSL+R LI ANE+GCLSQALTVAA+LS E        KD   KR+R E  LP
Sbjct: 427  IMAELPLEPSLSRTLIEANELGCLSQALTVAAILSAEITLRSTRSKDMEGKRKRQE--LP 484

Query: 579  DGKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESL 400
            DG G GDHIQ LQI+E W +T YDP WC    LQVR M  +KDVR QL  I+QK+ K   
Sbjct: 485  DGSGWGDHIQLLQIFESWDQTGYDPRWCSDHDLQVRGMKLSKDVRNQLCQIIQKIAKGPT 544

Query: 399  DVNSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQV 220
            DV++++S     ++R+LR+ALC G+ N++A+RM  HNGY T+ Y+++LVQVHPS+  L+ 
Sbjct: 545  DVHARKSRKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRTQLVQVHPSSV-LEG 603

Query: 219  DEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLSRTSS 58
            DE G +P YV+Y EL++T+RPY++N+CAV+ AWV+P+  KLEK DIN+LS  S+
Sbjct: 604  DEYGKFPMYVVYHELISTTRPYMRNICAVDQAWVEPILKKLEKLDINRLSGGSA 657


>gb|EOY00859.1| RNA helicase family protein isoform 3 [Theobroma cacao]
          Length = 692

 Score =  823 bits (2125), Expect = 0.0
 Identities = 416/648 (64%), Positives = 500/648 (77%)
 Frame = -1

Query: 2013 LPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXXX 1834
            LPI  +E +I++ V+ N V VIIGETGSGK+TQLSQ+L R G+++SGI+ VTQP      
Sbjct: 4    LPIVQFEKKIIETVEQNPVVVIIGETGSGKSTQLSQMLHRKGYTDSGIVAVTQPRRVAAV 63

Query: 1833 XXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVIIL 1654
                    ELGVRLGEEVGY+IRFEDRTS +T IKYLTDG LLRE LS+  L++YSVIIL
Sbjct: 64   SVSRRVAQELGVRLGEEVGYAIRFEDRTSERTQIKYLTDGVLLRESLSNPELNQYSVIIL 123

Query: 1653 DEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLFP 1474
            DEAHERS+NTDILLGLMK L+  R  +L+V+ITSATLDG+K S FFS CP+L +PG+LFP
Sbjct: 124  DEAHERSLNTDILLGLMKRLVGSRASNLKVLITSATLDGEKVSKFFSDCPLLTVPGKLFP 183

Query: 1473 VDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEEG 1294
            V+I YS E+P SY+ESSL+TALDIH+ +P+GD+L+FMTGQD+I+K+VLKLE+++++LEEG
Sbjct: 184  VEIFYSKERPTSYVESSLKTALDIHVREPEGDVLIFMTGQDDIEKLVLKLEDKVRSLEEG 243

Query: 1293 LCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVKQ 1114
             CMDAIILPLH SLPPE+QVRVF+P PPNCRR IVATNIAETSLTVDG+VYVID G+VKQ
Sbjct: 244  SCMDAIILPLHGSLPPEMQVRVFSPPPPNCRRFIVATNIAETSLTVDGVVYVIDSGYVKQ 303

Query: 1113 RQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQR 934
            RQYNP TGM+SLD++++S+VQANQRAGRAGRTRPGKCYRLYP  VY  E L  TVPEIQR
Sbjct: 304  RQYNPATGMYSLDVVQVSKVQANQRAGRAGRTRPGKCYRLYPSRVYNDEFLDVTVPEIQR 363

Query: 933  SSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRKM 754
            SSLA TV                   D PS ESLEDALKQLYLIDAID +G IT +GR M
Sbjct: 364  SSLAGTVLYLKSLDLPDIDILKFDFLDPPSTESLEDALKQLYLIDAIDENGSITSVGRTM 423

Query: 753  AELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLPDG 574
            AELPLEPSL+R LI ANE GCLSQALTVAAMLS E    P   K   KKR+    DLPDG
Sbjct: 424  AELPLEPSLSRTLIEANEYGCLSQALTVAAMLSAETNLLPNRSKSNEKKRKHPPLDLPDG 483

Query: 573  KGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLDV 394
             G GDHIQ LQI+E W    YD  WCK   LQVR M+F K+VR+QLS IMQK+ K S DV
Sbjct: 484  SGFGDHIQLLQIFECWDENDYDIGWCKYYDLQVRGMLFVKEVRKQLSQIMQKIAKGSSDV 543

Query: 393  NSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQVDE 214
             + +S    +N+R LRKALC G+A+++A+RM  HNGY+TL +KS+LV         Q D+
Sbjct: 544  QANQSRKGHQNYRNLRKALCIGYASQLAERMRHHNGYRTLGFKSQLV---------QPDD 594

Query: 213  DGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLS 70
            DGLY  YV+Y EL++TSRPY++N+CAVE  WV P+ DKLEK +++KLS
Sbjct: 595  DGLYGSYVVYHELISTSRPYMRNVCAVERQWVMPILDKLEKLNVSKLS 642


>gb|EEC68064.1| hypothetical protein OsI_35917 [Oryza sativa Indica Group]
          Length = 708

 Score =  823 bits (2125), Expect = 0.0
 Identities = 424/668 (63%), Positives = 508/668 (76%)
 Frame = -1

Query: 2019 PELPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXX 1840
            P LPI+ +E EI+ AV+ N V V+IGETGSGK+TQLSQIL R G++  G I VTQP    
Sbjct: 13   PALPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQPRRVA 72

Query: 1839 XXXXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVI 1660
                      EL V LG+EVGY+IRFEDRTS KT IKYLTDG LLRE LSD  L +YSVI
Sbjct: 73   AVSVSRRVAQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVI 132

Query: 1659 ILDEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRL 1480
            ILDEAHERS+NTDILLGLMK L++ R  DL+V+ITSATLDG K S FFS CPVLNIPG L
Sbjct: 133  ILDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTL 192

Query: 1479 FPVDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLE 1300
            FPV+  YSTE P +YIESSL+TA+DIH+ +  GD+L+FMTG+D+IDK+V KLEERIQNLE
Sbjct: 193  FPVEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLE 252

Query: 1299 EGLCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFV 1120
            EG CMDA++LPLH SLPPE QVRVF PAPPNCRR IVATN+AETSLTVDG+V+VID G+V
Sbjct: 253  EGSCMDALVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGYV 312

Query: 1119 KQRQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEI 940
            KQRQYNP +GM+SLD+++ISRVQA+QRAGRAGRTRPGKCYRLYP S+Y+ E L AT+PEI
Sbjct: 313  KQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIPEI 372

Query: 939  QRSSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGR 760
            QRSSLA +V                   D PSRESLEDAL+QLYLIDAID +G+IT++GR
Sbjct: 373  QRSSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDVGR 432

Query: 759  KMAELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLP 580
             MAELPLEPSL+R LI ANE+GCLSQALTVAA+LS E  F     KD   KR+R E  LP
Sbjct: 433  IMAELPLEPSLSRTLIEANELGCLSQALTVAAVLSAEITFRSTRSKDMEGKRKRQE--LP 490

Query: 579  DGKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESL 400
            DG G GDHIQ LQI+E W RT YDP WC    LQVR M F+KDVR QLS I+QK+ K S 
Sbjct: 491  DGSGWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKIAKGST 550

Query: 399  DVNSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQV 220
            DV +K+      ++R+LR+ALC G+ N++A+RM  HNGY T+ Y+++LVQVHP +  L+ 
Sbjct: 551  DVQAKKERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSV-LEG 609

Query: 219  DEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLSRTSSSFGMEL 40
            DE G  P YV+Y EL+ T+RP+++N+CAV+ +WVKP+  KLE+ D+NKLS  SS      
Sbjct: 610  DEYGKLPVYVVYHELINTTRPFMRNVCAVDQSWVKPILKKLERLDMNKLSGGSSGSKDPE 669

Query: 39   NTEDNNVS 16
              ED  VS
Sbjct: 670  PLEDKQVS 677


>ref|XP_006415720.1| hypothetical protein EUTSA_v10006961mg [Eutrema salsugineum]
            gi|557093491|gb|ESQ34073.1| hypothetical protein
            EUTSA_v10006961mg [Eutrema salsugineum]
          Length = 703

 Score =  822 bits (2123), Expect = 0.0
 Identities = 413/649 (63%), Positives = 511/649 (78%), Gaps = 1/649 (0%)
 Frame = -1

Query: 2013 LPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXXX 1834
            LPI  +E +IV+ V+ N V VIIGETGSGK+TQLSQIL R G++ SG+I VTQP      
Sbjct: 4    LPILQFEEKIVETVEKNPVVVIIGETGSGKSTQLSQILHRRGYTKSGVIAVTQPRRVAAV 63

Query: 1833 XXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVIIL 1654
                    EL V LGE+VGY+IRFEDRTSSKT IKYLTDG LLRE LS+  L  YSVIIL
Sbjct: 64   SVARRVAQELDVNLGEDVGYAIRFEDRTSSKTRIKYLTDGVLLRESLSNPMLDDYSVIIL 123

Query: 1653 DEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLFP 1474
            DEAHERS+NTDILLGLMK L+R R  + +V+ITSATLDG+K S+FFS CPVLN+PG+L+P
Sbjct: 124  DEAHERSLNTDILLGLMKRLVRIRSSNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYP 183

Query: 1473 VDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEEG 1294
            V+ILYS E+P SYIESSL+ A+DIH+ +P+GDIL+FMTGQD+I+K+V KLEE++++L EG
Sbjct: 184  VEILYSKERPGSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSKLEEKVRSLAEG 243

Query: 1293 LCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVKQ 1114
             CMDAII PLH SLPPE+QVRVF+P PPNCRR IVATNIAETSLTVDG+VYVID G+VKQ
Sbjct: 244  SCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVATNIAETSLTVDGVVYVIDSGYVKQ 303

Query: 1113 RQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQR 934
            RQYNP +GM+SLD+++IS+VQANQRAGRAGRTRPGKCYRLYP +V+  + L ATVPEIQR
Sbjct: 304  RQYNPSSGMYSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPFAVFRDDFLDATVPEIQR 363

Query: 933  SSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRKM 754
            +SLA +V                   D PS ESLEDALKQLYLIDAID +G IT IGR M
Sbjct: 364  TSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYLIDAIDGNGAITSIGRTM 423

Query: 753  AELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLPDG 574
            +ELPLEPSL+R LI ANE GCLSQALTV AMLS E+   P+  K   KKR+  E++LPDG
Sbjct: 424  SELPLEPSLSRTLIEANENGCLSQALTVVAMLSAESNLLPVRSKPNEKKRKHDESNLPDG 483

Query: 573  KGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLDV 394
             G GDHIQ LQI+E W R +YD  WCKQ G+QVR M+F KDVRRQL  IMQK++K+ L+V
Sbjct: 484  SGFGDHIQLLQIFECWDRNNYDTEWCKQNGMQVRGMVFVKDVRRQLCQIMQKISKDRLEV 543

Query: 393  NSK-RSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQVD 217
             ++ R+SS + ++R+LRKALC G AN++A+RM RHNGY+TL +K +L+QVHPS+  L  D
Sbjct: 544  GARGRNSSSRDDYRKLRKALCVGNANQVAERMLRHNGYRTLSFKPQLMQVHPSSV-LSTD 602

Query: 216  EDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLS 70
             +G+ P YV+Y EL++T+RP+++N+C +E +WV P+  K+EK ++ KLS
Sbjct: 603  NEGMLPNYVVYHELISTTRPFMRNVCVIEMSWVAPIKRKIEKLNVRKLS 651


>ref|NP_001067756.2| Os11g0310800 [Oryza sativa Japonica Group]
            gi|108864297|gb|ABA92900.2| Helicase associated domain
            family protein, expressed [Oryza sativa Japonica Group]
            gi|222615892|gb|EEE52024.1| hypothetical protein
            OsJ_33742 [Oryza sativa Japonica Group]
            gi|255680028|dbj|BAF28119.2| Os11g0310800 [Oryza sativa
            Japonica Group]
          Length = 708

 Score =  821 bits (2121), Expect = 0.0
 Identities = 424/668 (63%), Positives = 508/668 (76%)
 Frame = -1

Query: 2019 PELPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXX 1840
            PELPI+ +E EI+ AV+ N V V+IGETGSGK+TQLSQIL R G++  G I VTQP    
Sbjct: 13   PELPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQPRRVA 72

Query: 1839 XXXXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVI 1660
                      EL V LG+EVGY+IRFEDRTS KT IKYLTDG LLRE LSD  L +YSVI
Sbjct: 73   AVSVSRRVAQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVI 132

Query: 1659 ILDEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRL 1480
            ILDEAHERS+NTDILLGLMK L++ R  DL+V+ITSATLDG K S FFS CPVLNIPG L
Sbjct: 133  ILDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTL 192

Query: 1479 FPVDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLE 1300
            FPV+  YSTE P +YIESSL+TA+DIH+ +  GD+L+FMTG+D+IDK+V KLEERIQNLE
Sbjct: 193  FPVEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLE 252

Query: 1299 EGLCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFV 1120
            EG CMDA++LPLH SLPPE QVRVF PAPPNCRR IVATN+AETSLTVDG+V+VID G+V
Sbjct: 253  EGSCMDALVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGYV 312

Query: 1119 KQRQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEI 940
            KQRQYNP +GM+SLD+++ISRVQA+QRAGRAGRTRPGKCYRLYP S+Y+ E L AT+PEI
Sbjct: 313  KQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIPEI 372

Query: 939  QRSSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGR 760
            QRSSLA +V                   D PSRESLEDAL+QLYLIDAID +G+IT++GR
Sbjct: 373  QRSSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDVGR 432

Query: 759  KMAELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLP 580
             MAELPLEPSL+R LI ANE+GCLSQALTVAA+LS E  F     KD   KR+R E  LP
Sbjct: 433  IMAELPLEPSLSRTLIEANELGCLSQALTVAAVLSAEITFRSTRSKDMEGKRKRQE--LP 490

Query: 579  DGKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESL 400
            DG G GDHIQ LQI+E W RT YDP WC    LQVR M F+KDVR QLS I+QK+ K S 
Sbjct: 491  DGSGWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKIAKGST 550

Query: 399  DVNSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQV 220
            DV +K+      ++R+LR+ALC G+ N++A+RM  HNGY T+ Y+++LVQVHP +  L+ 
Sbjct: 551  DVQAKKERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSV-LEG 609

Query: 219  DEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLSRTSSSFGMEL 40
            DE G  P YV+Y EL+ T+RP+++N+ AV+ +WVKP+  KLE+ D+NKLS  SS      
Sbjct: 610  DEYGKLPVYVVYHELINTTRPFMRNVSAVDQSWVKPILKKLERLDMNKLSGGSSGSKDPE 669

Query: 39   NTEDNNVS 16
              ED  VS
Sbjct: 670  PLEDKQVS 677


>ref|XP_002436584.1| hypothetical protein SORBIDRAFT_10g005130 [Sorghum bicolor]
            gi|241914807|gb|EER87951.1| hypothetical protein
            SORBIDRAFT_10g005130 [Sorghum bicolor]
          Length = 705

 Score =  820 bits (2117), Expect = 0.0
 Identities = 424/673 (63%), Positives = 517/673 (76%), Gaps = 1/673 (0%)
 Frame = -1

Query: 2019 PELPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXX 1840
            P LPI+ +E  IV AV  N V V+IGETGSGK+TQLSQIL R G++  G I VTQP    
Sbjct: 10   PVLPISEHEDVIVAAVDANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQPRRVA 69

Query: 1839 XXXXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVI 1660
                      ELGV LG+EVGY+IRFEDRTS +T IKYLTDG LLRE LS+  L +YSVI
Sbjct: 70   AVSVSRRVAQELGVPLGDEVGYAIRFEDRTSERTCIKYLTDGVLLRESLSNPELRQYSVI 129

Query: 1659 ILDEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRL 1480
            ILDEAHERS+NTDILLGLMK L++ R  DL+V+ITSATLDG K S FFS CPVLNIPG L
Sbjct: 130  ILDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTL 189

Query: 1479 FPVDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLE 1300
            FPV+  YSTE+P +YIESSL+TA+DIH  +P GD+L+FMTG+D+IDK+V KLEERIQNLE
Sbjct: 190  FPVEKFYSTERPTNYIESSLRTAIDIHAKEPPGDVLIFMTGKDDIDKMVSKLEERIQNLE 249

Query: 1299 EGLCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFV 1120
            EG C+DA++LPLH SLPPELQVRVF PAPPNCRR IVATN+AETSLTVDG+V+VID G+V
Sbjct: 250  EGSCIDALVLPLHGSLPPELQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGYV 309

Query: 1119 KQRQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEI 940
            KQRQYNP +GM+SLD+++ISRVQA+QRAGRAGRTRPGKCYRLYP S+Y++E L ATVPEI
Sbjct: 310  KQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQNEFLEATVPEI 369

Query: 939  QRSSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGR 760
            QRSSLA +V                   D PSRESLEDAL+QLYLIDAID +G IT++GR
Sbjct: 370  QRSSLAGSVLYLKSLNLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGEITDVGR 429

Query: 759  KMAELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLP 580
             MAELPLEPSL+R LI ANE+GCLSQALTVA++LS E      + KD   KR+R E  LP
Sbjct: 430  VMAELPLEPSLSRTLIEANELGCLSQALTVASILSAEITLRSAS-KDMDGKRKRQE--LP 486

Query: 579  DGKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESL 400
            DG G GDHIQ LQI+E W ++ YDP WC    LQVRSM  +KDVR QL  I++K+ K S 
Sbjct: 487  DGSGWGDHIQLLQIFESWDQSGYDPRWCSDHDLQVRSMKLSKDVRNQLCQIIKKIAKGST 546

Query: 399  DVNSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQV 220
            DV++++S     ++R+LR+ALC G+ N++A+RM  HNGY T+ Y+S+LVQVHPS+  L+ 
Sbjct: 547  DVHARKSRKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRSQLVQVHPSSV-LEG 605

Query: 219  DEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLSRTSSS-FGME 43
            DE G +P YV+Y EL+ T+RPY++N+CAVE AWV+P+  KLEK D+NKLS  SS+    E
Sbjct: 606  DEYGKFPMYVIYHELICTTRPYMRNICAVEQAWVEPILKKLEKLDVNKLSGGSSAPKDSE 665

Query: 42   LNTEDNNVSVISE 4
            L  E+  V+ + +
Sbjct: 666  LLVENKQVNSLKK 678


>ref|XP_006361550.1| PREDICTED: ATP-dependent RNA helicase DHX8-like isoform X1 [Solanum
            tuberosum]
          Length = 700

 Score =  819 bits (2116), Expect = 0.0
 Identities = 414/654 (63%), Positives = 509/654 (77%), Gaps = 1/654 (0%)
 Frame = -1

Query: 2016 ELPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXX 1837
            +LPI  +E +IV+ VK N V V+IGETGSGK+TQL QIL R G++ SGII VTQP     
Sbjct: 3    DLPIVRFEEKIVETVKENPVVVVIGETGSGKSTQLPQILYRRGYAKSGIIAVTQPRRVAA 62

Query: 1836 XXXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVII 1657
                     E  VR+GEEVGY+IRFEDRTS KT IKYLTDG LLRE L +  L++YSVII
Sbjct: 63   VSVSRRVAQEQNVRIGEEVGYAIRFEDRTSEKTRIKYLTDGVLLRESLFNPELNQYSVII 122

Query: 1656 LDEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLF 1477
            LDEAHERS+NTDILLGLMK L++ R  +L+V+ITSATLDG K S FFS CPVL +PG LF
Sbjct: 123  LDEAHERSLNTDILLGLMKRLIKWRHSNLKVLITSATLDGGKVSRFFSDCPVLTVPGELF 182

Query: 1476 PVDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEE 1297
            PV+I++ +E P SY+E+SL+ A+DIH+ +P+GDIL+F+TGQD+I+K+VLKLEER+Q+LEE
Sbjct: 183  PVEIVHISEPPKSYVEASLRKAIDIHVREPEGDILIFLTGQDDIEKLVLKLEERVQSLEE 242

Query: 1296 GLCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVK 1117
            G CMDA+ILPLH SLPPE+QVRVF+P PPNCRR IV+TNIAETSLTVDG+VYVID G+VK
Sbjct: 243  GSCMDALILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVK 302

Query: 1116 QRQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQ 937
            QRQYNP TGM+SL++++IS+VQA QRAGRAGRTRPGKCYRLYP +VY  + L ATVPEIQ
Sbjct: 303  QRQYNPSTGMYSLEVVQISKVQAKQRAGRAGRTRPGKCYRLYPSTVYHDDFLDATVPEIQ 362

Query: 936  RSSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRK 757
            RSSLA TV                   D PS ESLEDALKQLYL+DA+D +G IT +GRK
Sbjct: 363  RSSLAGTVLYLKSLDLADMDILKFDFLDSPSVESLEDALKQLYLVDALDENGSITSLGRK 422

Query: 756  MAELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLPD 577
            MAELPLEPSL+R L+ ANE+ CLSQALTV +MLS E    P   K + KKR    ++LPD
Sbjct: 423  MAELPLEPSLSRTLLEANELDCLSQALTVVSMLSAETTLLPPPSKSSEKKRRHTPSNLPD 482

Query: 576  GKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLD 397
            G GLGDHIQ LQIYE+W++T Y+ +WCK+  LQVR M+F +DVR+QLS IMQK+TK SLD
Sbjct: 483  GFGLGDHIQLLQIYEQWYQTDYNIDWCKENNLQVRGMVFVRDVRKQLSQIMQKITKGSLD 542

Query: 396  V-NSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQV 220
            V  S R    ++ ++ LRKALC G+AN++A+RM RHNGY+ L +KS LVQVHPS+  L+ 
Sbjct: 543  VQTSNRRRGGQQEYKNLRKALCIGYANQLAERMIRHNGYRPLGFKSELVQVHPSSV-LKS 601

Query: 219  DEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLSRTSS 58
            DEDG+ P YV+Y EL+ TSRP+++N+CAVE  WV P+  KLEK ++ KLS  SS
Sbjct: 602  DEDGMLPNYVVYHELIVTSRPFMRNVCAVEMRWVAPILAKLEKLNVFKLSGGSS 655


>ref|XP_004239197.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Solanum
            lycopersicum]
          Length = 700

 Score =  818 bits (2114), Expect = 0.0
 Identities = 413/654 (63%), Positives = 509/654 (77%), Gaps = 1/654 (0%)
 Frame = -1

Query: 2016 ELPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXX 1837
            +LPI  +E +IV+ VK N V V+IGETGSGK+TQL QIL R G++ SGII VTQP     
Sbjct: 3    DLPIVRFEEKIVETVKENPVVVVIGETGSGKSTQLPQILYRRGYAKSGIIAVTQPRRVAA 62

Query: 1836 XXXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVII 1657
                     E  VR+GEEVGY+IRFEDRTS KT IKYLTDG LLRE L +  L++YSVII
Sbjct: 63   VSVSRRVAQEQNVRIGEEVGYAIRFEDRTSEKTRIKYLTDGVLLRESLFNPELNQYSVII 122

Query: 1656 LDEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLF 1477
            LDEAHERS+NTDILLGLMK L++ R  +L+V+ITSATLDG K S FFS CPVL +PG LF
Sbjct: 123  LDEAHERSLNTDILLGLMKRLIKWRHSNLKVLITSATLDGGKVSRFFSDCPVLTVPGELF 182

Query: 1476 PVDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEE 1297
            PV+I++ +E P SY+E+SL+ A+DIH+ +P+GDIL+FMTGQD+I+K+VLKLEER+Q+LEE
Sbjct: 183  PVEIVHISEPPKSYVEASLKKAIDIHVREPEGDILIFMTGQDDIEKLVLKLEERVQSLEE 242

Query: 1296 GLCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVK 1117
            G CMDA+ILPLH SLPPE+QVRVF+P PPNCRR IV+TNIAETSLTVDG+VYVID G+VK
Sbjct: 243  GSCMDALILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVK 302

Query: 1116 QRQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQ 937
            QRQYNP TGM+SL++++IS+VQA QRAGRAGRTRPGKCYRLYP +VY  + L ATVPEIQ
Sbjct: 303  QRQYNPSTGMYSLEVVQISKVQAKQRAGRAGRTRPGKCYRLYPSTVYHDDFLDATVPEIQ 362

Query: 936  RSSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRK 757
            RSSLA TV                   D PS +SLEDALKQLYL+DA+D +G IT +GRK
Sbjct: 363  RSSLAGTVLYLKSLDLADMDILKFDFLDSPSVKSLEDALKQLYLVDALDENGSITSLGRK 422

Query: 756  MAELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLPD 577
            MAELPLEPSL+R L+ ANE+ CLSQALTV +MLS E    P   K + KKR    ++LPD
Sbjct: 423  MAELPLEPSLSRTLLEANELDCLSQALTVVSMLSAETTLLPAPSKSSEKKRRHTPSNLPD 482

Query: 576  GKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLD 397
            G GLGDHIQ LQIYE+W++T Y+ +WCK+  LQVR M+F +DVR+QLS IMQK+T+ SLD
Sbjct: 483  GFGLGDHIQLLQIYEQWYQTDYNIDWCKENNLQVRGMLFVRDVRKQLSQIMQKITEGSLD 542

Query: 396  V-NSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQV 220
            V  S R    ++ ++ LRKALC G+AN++A+RM RHNGY+ L +KS LVQVHPS+  L+ 
Sbjct: 543  VQTSNRRRGGQQEYKNLRKALCIGYANQLAERMIRHNGYRPLGFKSELVQVHPSSV-LKS 601

Query: 219  DEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLSRTSS 58
            DEDG+ P YV+Y EL+ TSRP+++N+CAVE  WV P+  KLEK ++ KLS  SS
Sbjct: 602  DEDGMLPNYVVYHELIVTSRPFMRNVCAVEMRWVAPILAKLEKLNVFKLSGGSS 655


>ref|XP_006306906.1| hypothetical protein CARUB_v10008467mg [Capsella rubella]
            gi|482575617|gb|EOA39804.1| hypothetical protein
            CARUB_v10008467mg [Capsella rubella]
          Length = 699

 Score =  817 bits (2111), Expect = 0.0
 Identities = 411/648 (63%), Positives = 504/648 (77%)
 Frame = -1

Query: 2013 LPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXXX 1834
            LPI  +E +IV+ V  N V V+IGETGSGK+TQLSQIL RHG++ SG+I VTQP      
Sbjct: 4    LPILQFEEKIVETVDKNPVVVVIGETGSGKSTQLSQILHRHGYTKSGVIAVTQPRRVAAV 63

Query: 1833 XXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVIIL 1654
                    EL V LGE+VGY+IRFEDRTSSKT IKYLTDG LLRE LS+  L  YSVIIL
Sbjct: 64   SVARRVAQELDVPLGEDVGYAIRFEDRTSSKTRIKYLTDGVLLRESLSNPMLDDYSVIIL 123

Query: 1653 DEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLFP 1474
            DEAHERS+NTDILLGL+K L+R R  + +V+ITSATLDG+K S+FFS CPVLN+PG+L+P
Sbjct: 124  DEAHERSLNTDILLGLVKRLVRIRRSNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYP 183

Query: 1473 VDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEEG 1294
            V+ILYS E+PVSYIESSL+ A+DIH+ +P+GDIL+FMTGQD+I+K+V KLEE++++L EG
Sbjct: 184  VEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSKLEEKVRSLAEG 243

Query: 1293 LCMDAIILPLHASLPPELQVRVFTPAPPNCRRIIVATNIAETSLTVDGIVYVIDPGFVKQ 1114
             CMDAII PLH SLPPE+QVRVF+P PPNCRR IVATNIAETSLTVDG+VYVID G+VKQ
Sbjct: 244  SCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVATNIAETSLTVDGVVYVIDSGYVKQ 303

Query: 1113 RQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLPATVPEIQR 934
            RQYNP +GM+SLD+++IS+VQANQRAGRAGRTRPGKCYRLYP +VY  + L AT+PEIQR
Sbjct: 304  RQYNPSSGMYSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQR 363

Query: 933  SSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGRITEIGRKM 754
            +SLA +V                   D PS ESLEDALKQLY +DAID +G IT IGR M
Sbjct: 364  TSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFMDAIDENGAITSIGRTM 423

Query: 753  AELPLEPSLARALIAANEMGCLSQALTVAAMLSCENIFSPINRKDASKKRERVETDLPDG 574
            +ELPLEPSL+R LI ANE GCLSQALTV AMLS E    P   K   KKR+  +++LPDG
Sbjct: 424  SELPLEPSLSRTLIEANENGCLSQALTVVAMLSAETTLLPARSKPNDKKRKHDDSNLPDG 483

Query: 573  KGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQKLTKESLDV 394
             G GDHIQ LQI+E W R +YDP WCK+  LQVR M+F KDVRRQL  IMQK++K+ L+V
Sbjct: 484  SGYGDHIQLLQIFECWDRYNYDPVWCKENSLQVRGMVFVKDVRRQLCQIMQKISKDRLEV 543

Query: 393  NSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHPSACPLQVDE 214
             +   +S + N+  LRKALC G AN+IA+RM RHNGY+TL + S+LVQVHPS+  L    
Sbjct: 544  GAHGRNSSRDNYMNLRKALCVGNANQIAERMLRHNGYRTLSFASQLVQVHPSSA-LTAGN 602

Query: 213  DGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLS 70
            DG+ P YV+Y EL++T+RP+++N+CAVE +WV P+  K++K ++ KLS
Sbjct: 603  DGMLPNYVVYHELISTTRPFMRNVCAVEMSWVAPIKRKIDKLNVRKLS 650


>ref|XP_002314547.1| RNA helicase family protein [Populus trichocarpa]
            gi|222863587|gb|EEF00718.1| RNA helicase family protein
            [Populus trichocarpa]
          Length = 699

 Score =  817 bits (2110), Expect = 0.0
 Identities = 418/657 (63%), Positives = 508/657 (77%), Gaps = 9/657 (1%)
 Frame = -1

Query: 2013 LPINTYEHEIVQAVKHNSVSVIIGETGSGKTTQLSQILKRHGFSNSGIIGVTQPXXXXXX 1834
            LPI  +E +I++ V+ N+V VIIGETGSGK+TQLSQ+L R G++ SGII VTQP      
Sbjct: 5    LPIVQFEDKIMKTVEDNAVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIAVTQPRRVAAV 64

Query: 1833 XXXXXXXSELGVRLGEEVGYSIRFEDRTSSKTIIKYLTDGCLLRECLSDATLSRYSVIIL 1654
                    ELGV LGEEVGY+IRFEDRTS  T IKYLTDG LLRECLS+  L++YSVIIL
Sbjct: 65   SVARRVAQELGVTLGEEVGYAIRFEDRTSDLTRIKYLTDGVLLRECLSNPELNQYSVIIL 124

Query: 1653 DEAHERSINTDILLGLMKNLLRRRCEDLRVVITSATLDGDKFSDFFSKCPVLNIPGRLFP 1474
            DEAHERS+NTDIL+GL+K L++ R   L+V+ITSATLDG+K S+FFS CPVLN+PG+L+P
Sbjct: 125  DEAHERSLNTDILMGLVKRLVKMRASKLKVLITSATLDGEKVSEFFSDCPVLNVPGKLYP 184

Query: 1473 VDILYSTEQPVSYIESSLQTALDIHMHQPQGDILLFMTGQDEIDKVVLKLEERIQNLEEG 1294
            V+ILYS E+P SYIESS +TA+DIH+ +P+GD+L+FMTGQD+IDK+V KLE+R+Q+LEEG
Sbjct: 185  VEILYSEERPKSYIESSFRTAMDIHVREPEGDVLIFMTGQDDIDKLVSKLEDRVQSLEEG 244

Query: 1293 LCMDAIILPLHASLPPELQ--------VRVFTPAPPNCRRIIVATNIAETSLTVDGIVYV 1138
             CMDAIILPLH SLPPELQ        VRVF+P PPNCRR IVATNIAETSLTVDG+VYV
Sbjct: 245  SCMDAIILPLHGSLPPELQAGLSFLLFVRVFSPPPPNCRRFIVATNIAETSLTVDGVVYV 304

Query: 1137 IDPGFVKQRQYNPGTGMFSLDIMRISRVQANQRAGRAGRTRPGKCYRLYPRSVYEHELLP 958
            ID G+VKQRQYNP TGM+SLDI+ IS+VQANQRAGRAGRTRPGKCYRLY   VY+ ELL 
Sbjct: 305  IDSGYVKQRQYNPSTGMYSLDIVPISKVQANQRAGRAGRTRPGKCYRLYSSEVYQEELLD 364

Query: 957  ATVPEIQRSSLASTVXXXXXXXXXXXXXXXXXXXDQPSRESLEDALKQLYLIDAIDVDGR 778
             TVPEIQRSSLA +V                   D PS ESLEDALKQLYLIDAID  G 
Sbjct: 365  VTVPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSFESLEDALKQLYLIDAIDDTGL 424

Query: 777  ITEIGRKMAELPLEPSLARALIAANEMGCLSQALTVAAMLSCE-NIFSPINRKDASKKRE 601
            IT +G+ MAELPLEPSL+R L+ ANE GCLSQALTVAAMLS E  + +  + K   KKR+
Sbjct: 425  ITSVGQTMAELPLEPSLSRTLMEANENGCLSQALTVAAMLSAETTLLAGQSSKSNEKKRK 484

Query: 600  RVETDLPDGKGLGDHIQFLQIYEEWHRTHYDPNWCKQEGLQVRSMMFAKDVRRQLSGIMQ 421
                DLPDG G GDH+Q LQI+E+W +  +D  WCK +GLQVR MMF KDVRRQLS +MQ
Sbjct: 485  HPPPDLPDGSGYGDHVQLLQIFEQWDQNEFDIGWCKDKGLQVRGMMFVKDVRRQLSQLMQ 544

Query: 420  KLTKESLDVNSKRSSSEKRNFRELRKALCNGFANRIAQRMERHNGYKTLCYKSRLVQVHP 241
            K+ KE            +R+++ LRKALC G+AN++A+RM +HNGY+T+ +K +LVQVHP
Sbjct: 545  KIAKE-----------RQRDYKNLRKALCVGYANKLAERMVQHNGYRTIGFKPQLVQVHP 593

Query: 240  SACPLQVDEDGLYPEYVLYGELVATSRPYIKNLCAVECAWVKPVWDKLEKHDINKLS 70
            S+  L+ DEDG++P YV+Y EL+ATSRP+++N+CAVE  WV P+  KLEK +I+KLS
Sbjct: 594  SS-TLKTDEDGMFPNYVVYHELIATSRPFMRNVCAVEMPWVNPILKKLEKLNIDKLS 649