BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012939
         (1634 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_007258445.1| hypothetical protein [Natronolimnobius inner...    61   2e-06
ref|XP_005747260.1| PREDICTED: X-linked retinitis pigmentosa GTP...    60   2e-06
ref|WP_002481460.1| hypothetical protein [Staphylococcus simulan...    60   4e-06

>ref|WP_007258445.1| hypothetical protein [Natronolimnobius innermongolicus]
            gi|445604981|gb|ELY58917.1| hypothetical protein
            C493_05710 [Natronolimnobius innermongolicus JCM 12255]
          Length = 472

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 89/384 (23%), Positives = 147/384 (38%), Gaps = 21/384 (5%)
 Frame = +1

Query: 367  DQSDSEETLGEFK-KSLRSKKLAVVDALADDVNHEIEKVDKKAL------SKEDSDDDNI 525
            D  D   T+ +   ++L    + V DA  +++N E    D + L      + ED+D D+ 
Sbjct: 32   DDGDVSATIQDADVETLELDNVTVEDATIEELNVEEFDADVEELQDELDEADEDADADD- 90

Query: 526  IIXXXXXXXXXXXXXXXXDVMEDDPETEAGNPTLERDNRNPIISEVIKDVMQDIGTGEES 705
                                 EDD ET +       D+      E+ ++   D    EE 
Sbjct: 91   ---------------------EDDAETASAIQDDADDDEMTDDDEMDEEDADD-ADAEEV 128

Query: 706  LVKGPGISEKDADNGLLGDSSQEDHDCSKPSEGFEDGVQIGANEEGDLARSKEESVVDMA 885
             +    I   + ++  + D   E+ D  +  +  E       +EE  LA  ++E   D A
Sbjct: 129  TISDIQIEHLELEDVSIEDLELEEDDELEADDEDEMDDDEADDEENGLADDEDEMNDDEA 188

Query: 886  ADEIIETQENGQPDTLQDQEGTXXXXXXXXXXXXXXXIEDVTVQEQVVGPSLVSEISVAD 1065
             DE     ENG    L+D +                 +E++T++E  V    + E++V D
Sbjct: 189  DDE-----ENG----LEDDDAAEQDLIDEDADELT--VEELTIEELNVETLTIDELTVED 237

Query: 1066 VNGSTQDGLSRMVESDKDMVDVEPVTKFKRLNKSKRKSAKVAMVIDEMEANLEKENSQTN 1245
                  D L      D+D  D E       L   +   A+ A VI + +A+ E E     
Sbjct: 238  DEADDDDALDA---DDEDETDDEE----NGLADDEDDEAETAAVIQD-DADDEDEMDDDE 289

Query: 1246 VDEDDGLLQSNHDSLEDK--------IQTNSTGEVLSKPKRVRRLKKIVASDDEMEDRKP 1401
             DE++GL     D  E +        I+T    E+      V ++++    DDEM+D + 
Sbjct: 290  ADEENGLEDDEADDEETEEQEIESLTIETFDVDEITVDSMTVEQVEEAELDDDEMDDDEA 349

Query: 1402 ------ITADVESPADDESKMNDD 1455
                  +  D +  ADDE +MNDD
Sbjct: 350  DDEENGLADDEDDEADDEDEMNDD 373


>ref|XP_005747260.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
            [Pundamilia nyererei]
          Length = 1689

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 96/457 (21%), Positives = 161/457 (35%), Gaps = 15/457 (3%)
 Frame = +1

Query: 235  LCNVMESLTKEDNRVLDGSEEKVAQKIPDMGALEINK-EESRVSLDQSDSEETLGEFKKS 411
            LC+ +   +   N   DG +      +P     E  + E    S D S+ E   G   + 
Sbjct: 1120 LCSTLSHFSSS-NETEDGLKTDAQAGVPSESVNESQEVENDDSSRDPSEGEAVKGGLSEQ 1178

Query: 412  LRSKKLAVVDALADDVNHEIE-KVDKKALSKEDSDDDNIIIXXXXXXXXXXXXXXXXDVM 588
            +R + +       +D   E+E K DK +   EDS+D                        
Sbjct: 1179 IRGEHM-------EDSQKEVEEKSDKASGEDEDSEDGG---------------------K 1210

Query: 589  EDDPETEAGNPTLERDNRNPIISEVIKDVMQDIGTGEESLVKGPGISEKDADNGL----L 756
             +D + E+G+ +   D R    S   K+      TGEES   G G  + D D G      
Sbjct: 1211 NEDEDVESGSDS--EDKREECESSSDKE------TGEESNT-GEGEEDNDEDEGSDKTNA 1261

Query: 757  GDSSQEDHDCSKPSEGFEDG-VQIGANEEGDLARSKEESVVDMAAD-----EIIETQENG 918
             ++  E+    K S+G  D     GA EE +   ++E S  +   D     ++ E +E  
Sbjct: 1262 AETEGEEESSKKTSDGLSDSDGSEGAEEEEEEGENEESSDEESKEDKEEESKMSEDEEKK 1321

Query: 919  QPDTLQDQEGTXXXXXXXXXXXXXXXIEDVTVQEQVVGPSLVSEISVADVNGSTQ---DG 1089
              D  +  E T                E    +E         E +  D  G T+   D 
Sbjct: 1322 SGDESESDESTNRESEGEEDGEEGDTAESAKTEE---------EENDEDEEGETEEQNDA 1372

Query: 1090 LSRMVESDKDMVDVEPVTKFKRLNKSKRKSAKVAMVIDEMEANLEKENSQTNVDEDDGLL 1269
             +   + +KD V+ E   K +    S +   +     DE E  L+ E S    +E+ G  
Sbjct: 1373 STENEDEEKDSVEDEEADKSEGEQDSDKGEEEEDSEADEEE--LQDEKSDEEEEEEGGEE 1430

Query: 1270 QSNHDSLEDKIQTNSTGEVLSKPKRVRRLKKIVASDDEMEDRKPITADVESPADDESKMN 1449
            +   +S+ D       GE   K +     ++    ++E E+      D+E+  ++E K  
Sbjct: 1431 REESESVGDGEAETEDGEDEDKEESEEE-EESAEEEEEEEEEDTGDEDIEAEEEEEEKEE 1489

Query: 1450 DDXXXXXXXXXXXXXXXXXXELVDEKNKVAEDARDSS 1560
            D                   E  +E+N+  E+ +  S
Sbjct: 1490 DTGDEETEAEEEKEEDTGDEEEAEEENESEEEEKSKS 1526


>ref|WP_002481460.1| hypothetical protein [Staphylococcus simulans]
            gi|410876231|gb|EKS24142.1| hypothetical protein
            HMPREF9310_01969 [Staphylococcus simulans ACS-120-V-Sch1]
          Length = 711

 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 84/419 (20%), Positives = 164/419 (39%), Gaps = 17/419 (4%)
 Frame = +1

Query: 250  ESLTKEDNRVLDGSEEKVAQKIPDMGALEINKEESRVSLDQSDS--EETLGEFKKSLRSK 423
            E   ++D+   D  + K  +K       + +K +   S D  DS  EE   + KK+ +  
Sbjct: 143  EETEEDDSADEDSDKPKGKKKKKFFDRFKSHKSDKEESDDDEDSEDEENDEQDKKASKKS 202

Query: 424  KLAVVDALADDVNHEIEK--VDKKALSKEDSDDDNIIIXXXXXXXXXXXXXXXXDVMEDD 597
            K    D   D+   E E+   DKKA  K + +D+                    +++ +D
Sbjct: 203  KSKEDDTSKDEDTDESEETSADKKASKKSEPEDET-------------------ELVSED 243

Query: 598  PETEAGNPTLERDNRNPIISEVIKDVMQDIGTGE-----ESLVKGPGISEKDADNGL-LG 759
              +EA  P    +  +    E  +D  +D    E     +S  K    +E+  D      
Sbjct: 244  DTSEADEPDESEEESDDAAEESKEDTSKDEDASEADESDQSEDKSDDETEESEDEAEDSK 303

Query: 760  DSSQEDHDCSKPSEGFEDGVQIGANEEGDLARSKEESVVDMAADEIIETQENGQPDTLQD 939
            + + +D + S+  EG E   +  A +  +   S+EES  +   D    T E G+P+  ++
Sbjct: 304  EDTSKDEEASEEPEGDEKTTKASAGKTSEKPESEEESEPESEDD----TSETGEPEESEE 359

Query: 940  Q-EGTXXXXXXXXXXXXXXXIEDVTVQEQVVGPSLVSEISVADVNGSTQDGLSRMVESDK 1116
            + EG                 ++ T +++       S+  V ++    +D  S+   S  
Sbjct: 360  ESEGETEESKDEAEDS-----KEDTSKDEDESKESESDDEVEELEDEAKD--SKEDTSKD 412

Query: 1117 DMVDVEPVTKFKRLNKSKRKSAKVAMVIDEMEANLEKENSQTN------VDEDDGLLQSN 1278
            +    EP    K    S  ++++ +   +E E+  + E S+T+       + DD   +S 
Sbjct: 413  EEASEEPEADEKTSKASAERTSEKSEPEEESESKSDDETSETDESDQSEEESDDEAEESK 472

Query: 1279 HDSLEDKIQTNSTGEVLSKPKRVRRLKKIVASDDEMEDRKPITADVESPADDESKMNDD 1455
            +   + K+   S  +  +  ++    +   + D+E +D     A+ +S   DESK  D+
Sbjct: 473  NQVEDSKVDDTSDDKDEASDEKKESEEDSKSDDEESKDE----AEEDSTESDESKKADN 527