BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012896
         (417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002968400.1| hypothetical protein SELMODRAFT_409192 [Sela...    97   3e-18
ref|XP_005774671.1| hypothetical protein EMIHUDRAFT_101397 [Emil...    59   7e-07
ref|WP_016405372.1| uvrD/REP helicase [Clostridium sp. CAG:1013]...    57   3e-06
ref|XP_005704101.1| DNA helicase II / ATP-dependent DNA helicase...    55   1e-05

>ref|XP_002968400.1| hypothetical protein SELMODRAFT_409192 [Selaginella moellendorffii]
           gi|300164044|gb|EFJ30654.1| hypothetical protein
           SELMODRAFT_409192 [Selaginella moellendorffii]
          Length = 676

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 51/125 (40%), Positives = 81/125 (64%)
 Frame = -2

Query: 377 IVVASRCLINKNKRRMPKTIRTASQTGAIMTVCECRNVQCEATVIVDFIESLKSQGVPLR 198
           IV A+R +I++N+ RM K+I T + TG ++ +CECRNV CE   I +FI S +++GV L 
Sbjct: 224 IVAAARSVISRNESRMRKSIGTTAPTGKLVAMCECRNVLCEVAAISNFISSSRAEGVKLS 283

Query: 197 EVAILYRLQYVGMDIKRYLQDWGIECHVRGGGPGSVGNHSFVKGINGMDTGIGDVVDEIL 18
           E+A+LYR+  VG++++ +LQ  G+ C ++  G GS  +    KG     +  G+ + +IL
Sbjct: 284 EIAVLYRVHRVGVELQHHLQAIGVPCKMKVTG-GSDDSTVSAKGF----SSTGEALADIL 338

Query: 17  AVLRL 3
            VLRL
Sbjct: 339 GVLRL 343


>ref|XP_005774671.1| hypothetical protein EMIHUDRAFT_101397 [Emiliania huxleyi CCMP1516]
           gi|485626527|gb|EOD22242.1| hypothetical protein
           EMIHUDRAFT_101397 [Emiliania huxleyi CCMP1516]
          Length = 747

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/80 (36%), Positives = 47/80 (58%)
 Frame = -2

Query: 368 ASRCLINKNKRRMPKTIRTASQTGAIMTVCECRNVQCEATVIVDFIESLKSQGVPLREVA 189
           A+  +I++N  R+PK   T++  G  +  CEC N QCEA  +V  +  L+++ VP  +VA
Sbjct: 304 AANAVISRNACRVPKHAWTSNAEGGDVVRCECYNAQCEADWLVGKLGELRARRVPFNDVA 363

Query: 188 ILYRLQYVGMDIKRYLQDWG 129
           ILYR   +G  +   L++ G
Sbjct: 364 ILYRTHAIGKQLAAALRERG 383


>ref|WP_016405372.1| uvrD/REP helicase [Clostridium sp. CAG:1013]
           gi|511346039|emb|CCX37913.1| uvrD/REP helicase
           [Clostridium sp. CAG:1013]
          Length = 715

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/71 (42%), Positives = 42/71 (59%)
 Frame = -2

Query: 377 IVVASRCLINKNKRRMPKTIRTASQTGAIMTVCECRNVQCEATVIVDFIESLKSQGVPLR 198
           I+ A+  LI+KN+ RM K +     +G  +  C   N + EA  +V  IE L SQGVP R
Sbjct: 295 ILGAANSLIDKNQHRMKKDLIPKLPSGGPVVCCFSENQEAEALWMVSQIEELHSQGVPYR 354

Query: 197 EVAILYRLQYV 165
           ++A+LYR  YV
Sbjct: 355 DIAVLYRAHYV 365


>ref|XP_005704101.1| DNA helicase II / ATP-dependent DNA helicase PcrA [Galdieria
           sulphuraria] gi|452820540|gb|EME27581.1| DNA helicase II
           / ATP-dependent DNA helicase PcrA [Galdieria
           sulphuraria]
          Length = 765

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/109 (33%), Positives = 54/109 (49%)
 Frame = -2

Query: 377 IVVASRCLINKNKRRMPKTIRTASQTGAIMTVCECRNVQCEATVIVDFIESLKSQGVPLR 198
           IV+ +  LI +NK R PKT+   S     + V  CRN +CE   + + I +L S GV   
Sbjct: 304 IVLCTSNLILRNKYRTPKTVINDSAKEGQIQVWICRNEKCELETLSNNILNLTSNGVANN 363

Query: 197 EVAILYRLQYVGMDIKRYLQDWGIECHVRGGGPGSVGNHSFVKGINGMD 51
            +AIL R + +  +I  YL++  I C +      S G+   +   NG D
Sbjct: 364 NIAILVRTRSLAFEIFSYLKNREIPCRLVSEASQSSGDDFEILPRNGQD 412