BLASTX nr result

ID: Ephedra28_contig00012868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012868
         (449 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY16963.1| DEA(D/H)-box RNA helicase family protein [Theobro...    67   2e-09
gb|EXC36103.1| DEAD-box ATP-dependent RNA helicase 50 [Morus not...    64   2e-08
gb|EXB95897.1| DNA topoisomerase 3-alpha [Morus notabilis]             64   2e-08
ref|XP_004160656.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   2e-08
ref|XP_004147668.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   2e-08
ref|XP_003522431.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   2e-08
ref|XP_003526886.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   2e-08
ref|XP_002519352.1| dead box ATP-dependent RNA helicase, putativ...    64   2e-08
dbj|BAD18438.1| unnamed protein product [Homo sapiens]                 64   2e-08
gb|EPS70034.1| hypothetical protein M569_04728, partial [Genlise...    63   3e-08
ref|XP_004298245.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    63   5e-08
ref|XP_002314343.2| hypothetical protein POPTR_0010s00730g [Popu...    62   6e-08
ref|XP_006840407.1| hypothetical protein AMTR_s00045p00149950 [A...    62   6e-08
gb|EMJ26350.1| hypothetical protein PRUPE_ppa002433mg [Prunus pe...    62   6e-08
gb|AAO00880.1| putative DEAD/DEAH box helicase [Arabidopsis thal...    62   6e-08
ref|XP_002961652.1| hypothetical protein SELMODRAFT_403724 [Sela...    62   6e-08
ref|XP_002964717.1| hypothetical protein SELMODRAFT_142751 [Sela...    62   6e-08
ref|NP_187354.1| DEAD-box ATP-dependent RNA helicase 50 [Arabido...    62   6e-08
ref|XP_006478533.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    62   8e-08
ref|XP_006441939.1| hypothetical protein CICLE_v10019165mg [Citr...    62   8e-08

>gb|EOY16963.1| DEA(D/H)-box RNA helicase family protein [Theobroma cacao]
          Length = 639

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IFVVGKQVPLA +II RN+KGHPLH++P+A
Sbjct: 577 FDFPRDPSEYVRRVGRTARGAGGKGKAFIFVVGKQVPLARRIIERNQKGHPLHDVPSA 634


>gb|EXC36103.1| DEAD-box ATP-dependent RNA helicase 50 [Morus notabilis]
          Length = 308

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IFVVGKQV LA +II RN+KGHPLH++P+A
Sbjct: 246 FDFPRDPSEYVRRVGRTARGVAGKGKAFIFVVGKQVSLARRIIERNQKGHPLHDVPSA 303


>gb|EXB95897.1| DNA topoisomerase 3-alpha [Morus notabilis]
          Length = 1580

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447  FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
            FDFPRDPSEY                 +IFVVGKQV LA +II RN+KGHPLH++P+A
Sbjct: 1518 FDFPRDPSEYVRRVGRTARGVAGKGKAFIFVVGKQVSLARRIIERNQKGHPLHDVPSA 1575


>ref|XP_004160656.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Cucumis
           sativus]
          Length = 382

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/63 (52%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAACS 271
           FDFPRDPSEY                 +IFVVGKQV LA +II RN KGHPLH++P+A  
Sbjct: 320 FDFPRDPSEYVRRVGRTARGATGKGKAFIFVVGKQVSLARRIIERNRKGHPLHDVPSAYE 379

Query: 270 NNY 262
             Y
Sbjct: 380 LTY 382


>ref|XP_004147668.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Cucumis
           sativus]
          Length = 648

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/63 (52%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAACS 271
           FDFPRDPSEY                 +IFVVGKQV LA +II RN KGHPLH++P+A  
Sbjct: 586 FDFPRDPSEYVRRVGRTARGATGKGKAFIFVVGKQVSLARRIIERNRKGHPLHDVPSAYE 645

Query: 270 NNY 262
             Y
Sbjct: 646 LTY 648


>ref|XP_003522431.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Glycine
           max]
          Length = 528

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IFVVGKQV LA KI+ RN+KGHPLH++P+A
Sbjct: 470 FDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNQKGHPLHDVPSA 527


>ref|XP_003526886.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50 [Glycine max]
          Length = 530

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IFVVGKQV LA KI+ RN+KGHPLH++P+A
Sbjct: 472 FDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNQKGHPLHDVPSA 529


>ref|XP_002519352.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223541667|gb|EEF43216.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 594

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IFVVGKQV LA KI+ RN+KGHPLH++P+A
Sbjct: 532 FDFPRDPSEYVRRVGRTARGANGKGKAFIFVVGKQVSLAQKIMERNQKGHPLHDVPSA 589


>dbj|BAD18438.1| unnamed protein product [Homo sapiens]
          Length = 528

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IFVVGKQV LA KI+ RN+KGHPLH++P+A
Sbjct: 470 FDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNQKGHPLHDVPSA 527


>gb|EPS70034.1| hypothetical protein M569_04728, partial [Genlisea aurea]
          Length = 568

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 31/58 (53%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 Y+F VGKQV LA +II RN KGHPLH++P+A
Sbjct: 509 FDFPRDPSEYVRRVGRTARGAGGQGTAYVFAVGKQVTLARRIIERNRKGHPLHDIPSA 566


>ref|XP_004298245.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Fragaria
           vesca subsp. vesca]
          Length = 673

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IFVVGKQV LA +I+ RN+KGHP+H++PAA
Sbjct: 611 FDFPRDPSEYVRRVGRTARGAGGVGKAFIFVVGKQVSLARRIMDRNQKGHPVHDVPAA 668


>ref|XP_002314343.2| hypothetical protein POPTR_0010s00730g [Populus trichocarpa]
           gi|550328821|gb|EEF00514.2| hypothetical protein
           POPTR_0010s00730g [Populus trichocarpa]
          Length = 596

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/58 (56%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IF VGKQV LA KII RNEKGHPLH++P A
Sbjct: 534 FDFPRDPSEYVRRVGRTARGARGNGKAFIFAVGKQVFLARKIIQRNEKGHPLHDVPFA 591


>ref|XP_006840407.1| hypothetical protein AMTR_s00045p00149950 [Amborella trichopoda]
           gi|548842125|gb|ERN02082.1| hypothetical protein
           AMTR_s00045p00149950 [Amborella trichopoda]
          Length = 700

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/58 (53%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 ++FVVGKQV LA KI+ RN+KGHPLH +P+A
Sbjct: 635 FDFPRDPSEYVRRVGRTARGAGGKGKAFVFVVGKQVSLARKIMDRNQKGHPLHTVPSA 692


>gb|EMJ26350.1| hypothetical protein PRUPE_ppa002433mg [Prunus persica]
          Length = 673

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/58 (55%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IFVVGKQV LA KI  RN KGHP+H++PAA
Sbjct: 611 FDFPRDPSEYVRRVGRTARGAGGIGKAFIFVVGKQVSLARKITERNRKGHPVHDVPAA 668


>gb|AAO00880.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
          Length = 781

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/58 (55%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IFVVGKQV LA +II RNEKGHP+H++P A
Sbjct: 719 FDFPRDPSEYVRRVGRTARGARGKGKAFIFVVGKQVGLARRIIERNEKGHPVHDVPNA 776


>ref|XP_002961652.1| hypothetical protein SELMODRAFT_403724 [Selaginella moellendorffii]
           gi|300170311|gb|EFJ36912.1| hypothetical protein
           SELMODRAFT_403724 [Selaginella moellendorffii]
          Length = 583

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXAYIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FD+PRDPSEY                ++FVVGKQV LA K++ RNEK HP+H +P A
Sbjct: 525 FDYPRDPSEYIRRVGRTARAGGAGKVFVFVVGKQVSLARKVMARNEKRHPVHAVPGA 581


>ref|XP_002964717.1| hypothetical protein SELMODRAFT_142751 [Selaginella moellendorffii]
           gi|300166950|gb|EFJ33555.1| hypothetical protein
           SELMODRAFT_142751 [Selaginella moellendorffii]
          Length = 420

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXAYIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FD+PRDPSEY                ++FVVGKQV LA K++ RNEK HP+H +P A
Sbjct: 362 FDYPRDPSEYIRRVGRTARAGGAGKVFVFVVGKQVSLARKVMARNEKRHPVHAVPGA 418


>ref|NP_187354.1| DEAD-box ATP-dependent RNA helicase 50 [Arabidopsis thaliana]
           gi|108861898|sp|Q8GUG7.2|RH50_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 50
           gi|6729005|gb|AAF27002.1|AC016827_13 putative DEAD/DEAH
           box helicase [Arabidopsis thaliana]
           gi|15081735|gb|AAK82522.1| AT3g06980/F17A9_13
           [Arabidopsis thaliana] gi|16519315|emb|CAC82719.1|
           DEAD-box RNA Helicase [Arabidopsis thaliana]
           gi|21360513|gb|AAM47372.1| AT3g06980/F17A9_13
           [Arabidopsis thaliana] gi|332640962|gb|AEE74483.1|
           DEAD-box ATP-dependent RNA helicase 50 [Arabidopsis
           thaliana]
          Length = 781

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/58 (55%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IFVVGKQV LA +II RNEKGHP+H++P A
Sbjct: 719 FDFPRDPSEYVRRVGRTARGARGKGKAFIFVVGKQVGLARRIIERNEKGHPVHDVPNA 776


>ref|XP_006478533.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Citrus
           sinensis]
          Length = 679

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/58 (53%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IFVVGKQV LA +I+ RN KGHPLH++P+A
Sbjct: 617 FDFPRDPSEYVRRVGRTARGAGGTGKAFIFVVGKQVSLAQRIMERNRKGHPLHDVPSA 674


>ref|XP_006441939.1| hypothetical protein CICLE_v10019165mg [Citrus clementina]
           gi|557544201|gb|ESR55179.1| hypothetical protein
           CICLE_v10019165mg [Citrus clementina]
          Length = 675

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/58 (53%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -3

Query: 447 FDFPRDPSEYXXXXXXXXXXXXXXXA-YIFVVGKQVPLANKIITRNEKGHPLHELPAA 277
           FDFPRDPSEY                 +IFVVGKQV LA +I+ RN KGHPLH++P+A
Sbjct: 613 FDFPRDPSEYVRRVGRTARGAGGTGKAFIFVVGKQVSLAQRIMERNRKGHPLHDVPSA 670


Top