BLASTX nr result
ID: Ephedra28_contig00012839
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00012839
(841 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A... 329 7e-88
gb|ABR18148.1| unknown [Picea sitchensis] 320 5e-85
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 318 2e-84
gb|EOY30723.1| Eukaryotic rpb5 RNA polymerase subunit family pro... 315 1e-83
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I... 315 2e-83
ref|XP_002979667.1| hypothetical protein SELMODRAFT_228648 [Sela... 310 5e-82
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun... 306 8e-81
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ... 305 1e-80
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, I... 304 2e-80
ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|5... 304 2e-80
gb|EMJ19617.1| hypothetical protein PRUPE_ppa011542mg [Prunus pe... 303 5e-80
gb|AFK41303.1| unknown [Medicago truncatula] 302 1e-79
ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, I... 301 2e-79
ref|XP_001758465.1| predicted protein [Physcomitrella patens] gi... 299 9e-79
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin... 298 2e-78
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I... 297 3e-78
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a... 297 4e-78
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a... 296 6e-78
emb|CBI28035.3| unnamed protein product [Vitis vinifera] 296 8e-78
ref|XP_001754558.1| predicted protein [Physcomitrella patens] gi... 296 8e-78
>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
gi|548863022|gb|ERN20377.1| hypothetical protein
AMTR_s00068p00034280 [Amborella trichopoda]
Length = 206
Score = 329 bits (844), Expect = 7e-88
Identities = 157/203 (77%), Positives = 184/203 (90%)
Frame = -3
Query: 800 MDDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDK 621
MDD +++FRIRRT++QML+DRGYLVGDFEIN+TK FI KFG++ +KDDL INK MR+
Sbjct: 4 MDDQTSKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNN 63
Query: 620 PSDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHL 441
PS+QI+VFFPE+ KVGVKT+KTY ERMK+E+VFRAILV+QQ+LTPFAR +QE KFHL
Sbjct: 64 PSEQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQEISAKFHL 123
Query: 440 EVFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKR 261
E+FQESELLVNIKEH LVPEHQVLT+EEKK+LLERYTLKETQLPR+Q +DP+ RYYGLKR
Sbjct: 124 EIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 183
Query: 260 GQVVKIIRPSETAGRYVTYRFVV 192
GQVVKIIRPSETAGRYVTYR+VV
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVV 206
>gb|ABR18148.1| unknown [Picea sitchensis]
Length = 194
Score = 320 bits (819), Expect = 5e-85
Identities = 160/205 (78%), Positives = 178/205 (86%)
Frame = -3
Query: 806 LSMDDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMR 627
+++D+ N++FRIRRTVLQML DR YLVGDFEIN TKE F+ KFGEDP+K+DL INKA R
Sbjct: 1 MALDEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKR 60
Query: 626 DKPSDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKF 447
+ PS+QIFVFFPE+AKVGVK+IKTYVERMK+E VFRAILVVQQ EF GKF
Sbjct: 61 NSPSEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQ-----------EFSGKF 109
Query: 446 HLEVFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGL 267
HLEVFQE+ELLVNIKEH LVPE Q+LT EEKK+LLERYTLKETQLPRMQESDPV RYYGL
Sbjct: 110 HLEVFQEAELLVNIKEHVLVPEQQILTPEEKKTLLERYTLKETQLPRMQESDPVARYYGL 169
Query: 266 KRGQVVKIIRPSETAGRYVTYRFVV 192
KRGQVVKIIRPSETAGRYVTYR+VV
Sbjct: 170 KRGQVVKIIRPSETAGRYVTYRYVV 194
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 318 bits (814), Expect = 2e-84
Identities = 152/202 (75%), Positives = 181/202 (89%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
D+ R+FRIRRTV+QML+DRGY VGDFEIN++KE FI+KFGE+ +++DL INKA+R+
Sbjct: 5 DEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRNDS 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
SDQI+VFFP++ KVGVKT+KTY RMK+E+VFRAILVVQQ+LTPFAR +QE KFHLE
Sbjct: 65 SDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQE+ELLVNIKEH LVPEHQVLT EEKK+LL+RYT+KETQLPR+Q +DP+ RYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFVV 192
QVVKIIRPSETAGRYVTYR+VV
Sbjct: 185 QVVKIIRPSETAGRYVTYRYVV 206
>gb|EOY30723.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 206
Score = 315 bits (808), Expect = 1e-83
Identities = 151/202 (74%), Positives = 178/202 (88%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
DD R+FRIR+TV+QMLKDRGY VGDFEI +TK FISK+GE+ +++DL INK R+
Sbjct: 5 DDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTKRNDN 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
SDQI+VFFP++AKVGVKT+KTY RMK+E+VFRA+LVVQQ+LTPFAR + E KFHLE
Sbjct: 65 SDQIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEISSKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQESELLVN+KEH+LVPEHQVLT EEKK+LL+RYT+KETQLPR+Q SDP+ RYYGLKRG
Sbjct: 125 VFQESELLVNVKEHSLVPEHQVLTNEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFVV 192
QVVKIIRPSETAGRYVTYR+VV
Sbjct: 185 QVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1 isoform 1 [Vitis vinifera]
gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1 isoform 2
[Vitis vinifera]
Length = 206
Score = 315 bits (806), Expect = 2e-83
Identities = 151/202 (74%), Positives = 179/202 (88%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
++ +R+FRIR+TV+QMLKDRGY VGDFEIN+TK F+SKFGE+ +++DL INKA R
Sbjct: 5 EEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDS 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
SDQI+VFFPE+ KVGVKT+KTY RMK+E+VFRAILVVQQ+LTPFAR + E KFHLE
Sbjct: 65 SDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQE+ELLVNIKEH LVPEHQVLT+EEKK+LLERYT+KETQLPR+Q SDP+ RY+GLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFVV 192
QVVKIIRPSETAGRY+TYR+VV
Sbjct: 185 QVVKIIRPSETAGRYITYRYVV 206
>ref|XP_002979667.1| hypothetical protein SELMODRAFT_228648 [Selaginella moellendorffii]
gi|302807361|ref|XP_002985375.1| hypothetical protein
SELMODRAFT_181697 [Selaginella moellendorffii]
gi|300146838|gb|EFJ13505.1| hypothetical protein
SELMODRAFT_181697 [Selaginella moellendorffii]
gi|300152427|gb|EFJ19069.1| hypothetical protein
SELMODRAFT_228648 [Selaginella moellendorffii]
Length = 206
Score = 310 bits (793), Expect = 5e-82
Identities = 149/203 (73%), Positives = 177/203 (87%)
Frame = -3
Query: 800 MDDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDK 621
+DD+ NR++RIRRT++QML+DR YLV D+E++LTKE F KFG++P++DDL I+KA R
Sbjct: 4 LDDSTNRLYRIRRTIMQMLRDRDYLVADYEVSLTKEQFRDKFGDEPKRDDLVISKAKRSD 63
Query: 620 PSDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHL 441
SDQIFVFFPE+ KVGVKTIKTY ERMK+E VFRAI+VVQ SLTPFA+ L E K+ +
Sbjct: 64 QSDQIFVFFPEEPKVGVKTIKTYAERMKSELVFRAIMVVQTSLTPFAKQCLSEMAPKYQI 123
Query: 440 EVFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKR 261
EVFQE+ELLVNIKEHTLVPEHQVL+ EEKK+LLERYT+KE+QLPRMQ+ DPV RYYGLK
Sbjct: 124 EVFQEAELLVNIKEHTLVPEHQVLSAEEKKTLLERYTVKESQLPRMQDRDPVARYYGLKH 183
Query: 260 GQVVKIIRPSETAGRYVTYRFVV 192
GQVVKIIRPSETAGRYVTYR+VV
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVV 206
>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 306 bits (783), Expect = 8e-81
Identities = 145/201 (72%), Positives = 176/201 (87%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
+D R+FRIRRTV+QML+DR YLVGDFE+N+TKE F +K+GE+ +++DL INK+ R+
Sbjct: 5 EDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSRRNDS 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
DQI+VFFPE+ KVGVKT+KTY+ RMK+E+V RA+LVVQQ+LTPFAR + E KFHLE
Sbjct: 65 PDQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQE+ELLVNIKEH LVPEHQVLT EEKK+LLERYT+KETQLPR+Q +DP+ RYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFV 195
QVVKIIRPSETAGRY+TYR+V
Sbjct: 185 QVVKIIRPSETAGRYITYRYV 205
>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Medicago truncatula] gi|355511987|gb|AES93610.1|
DNA-directed RNA polymerases I, II, and III subunit
RPABC1 [Medicago truncatula]
Length = 410
Score = 305 bits (781), Expect = 1e-80
Identities = 146/211 (69%), Positives = 178/211 (84%)
Frame = -3
Query: 824 TSSVRILSMDDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLT 645
T+ ++ ++ R++RIR+TV+QMLKDR YLVGDFE+N++K DF K+GE+ +++DL
Sbjct: 200 TTKKTMVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLV 259
Query: 644 INKAMRDKPSDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQ 465
INK +DKPSDQI+VFFPE+AKVGVKT+KTY RM +E+V+RAILV Q SLTPFA+ +
Sbjct: 260 INKTKKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVS 319
Query: 464 EFQGKFHLEVFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPV 285
E KFHLEVFQE+ELLVNIKEH LVPEHQ+L EKK+LLERYT+KETQLPR+Q +DPV
Sbjct: 320 EIASKFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPV 379
Query: 284 GRYYGLKRGQVVKIIRPSETAGRYVTYRFVV 192
RYYGLKRGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 380 ARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 410
>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 206
Score = 304 bits (779), Expect = 2e-80
Identities = 145/202 (71%), Positives = 175/202 (86%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
++ R++RIR+TV++ML+DR YLVGDFEIN++K F K+GE+ +++DL INK +DKP
Sbjct: 5 EEEITRLYRIRKTVMEMLRDRNYLVGDFEINMSKHQFKEKYGENMKREDLVINKTKKDKP 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
SDQI+VFFPE+ KVGVKT+KTY+ RM +E+V+RAILV Q SLTPFAR S+ E KFHLE
Sbjct: 65 SDQIYVFFPEEVKVGVKTMKTYINRMNSENVYRAILVCQTSLTPFARTSVAEISSKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQE+ELLVNIK+H LVPEHQVLT EKK+LLERYT+KETQLPR+Q +DPV RYYGLKRG
Sbjct: 125 VFQEAELLVNIKDHVLVPEHQVLTDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFVV 192
QVVKIIRPSETAGRYVTYRFVV
Sbjct: 185 QVVKIIRPSETAGRYVTYRFVV 206
>ref|XP_002331171.1| predicted protein [Populus trichocarpa]
gi|566176743|ref|XP_006381734.1| DNA-directed RNA
polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 304 bits (779), Expect = 2e-80
Identities = 146/202 (72%), Positives = 175/202 (86%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
++ R+ RIR+TV+QMLKDRGY VGDFEI +T+E F SK+G + +++DL INK R+
Sbjct: 5 EEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDS 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
SDQI+VFFPE+AKVGVKT+KTY RMK+E+VFRAILVVQQ+LTPFAR + E KFHLE
Sbjct: 65 SDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQE+ELLVNIKEH LVPEHQVL+ EEKK+LLERYT+KETQLPR+Q +DP+ RYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFVV 192
QVVKIIRPSETAGRYVTYR+V+
Sbjct: 185 QVVKIIRPSETAGRYVTYRYVI 206
>gb|EMJ19617.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
Length = 206
Score = 303 bits (776), Expect = 5e-80
Identities = 142/202 (70%), Positives = 175/202 (86%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
++ R++R+R+TV+QMLKDR YLVGDFEIN+T+E F SK+GE+ +++DLTINK R
Sbjct: 5 EEEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTKRSDS 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
SDQI+VFFPE+ KVGVKT+KTY RMK+E+V RA+LV QQ+LTPFA+ + E KFHLE
Sbjct: 65 SDQIYVFFPEEPKVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQE+ELLVNIKEH LVPEH VLTTEEKK+LLERYT+KETQLPR+Q +DP+ +YYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHLVLTTEEKKTLLERYTVKETQLPRIQVTDPIAKYYGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFVV 192
QVVKIIRPSETAGRY+TYR+V+
Sbjct: 185 QVVKIIRPSETAGRYITYRYVI 206
>gb|AFK41303.1| unknown [Medicago truncatula]
Length = 206
Score = 302 bits (773), Expect = 1e-79
Identities = 144/202 (71%), Positives = 173/202 (85%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
++ R++RIR+TV+QMLKDR YLVGDFE+N++K DF K+GE+ +++DL INK +DKP
Sbjct: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKKDKP 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
SDQI+VFFPE+AKVGVKT+KTY RM +E+V+RAILV Q SLTPFA+ + E KFHLE
Sbjct: 65 SDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQE+ELLVNIKEH LVPEHQ+L EKK+LLERYT+KETQLPR+Q +DPV RYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFVV 192
QVVKIIRPSETAGRYVTYR VV
Sbjct: 185 QVVKIIRPSETAGRYVTYRLVV 206
>ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 206
Score = 301 bits (771), Expect = 2e-79
Identities = 144/202 (71%), Positives = 173/202 (85%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
++ R++RIR+TV+ ML+DR YLVGDFE+N++K +F K+GE+ +++DL INK +DKP
Sbjct: 5 EEEITRLYRIRKTVMVMLRDRNYLVGDFEVNMSKHEFKEKYGENMKREDLVINKTKKDKP 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
SDQI+VFFPE+ KVGVKT+KTY RM +E+V+RAILV Q SLTPFAR + E KFHLE
Sbjct: 65 SDQIYVFFPEEVKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCIAEVSSKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQE+ELLVNIKEH LVPEHQVLT EKK+LLERYT+KETQLPR+Q +DPV RYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTETEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFVV 192
QVVKIIRPSETAGRYVTYRFVV
Sbjct: 185 QVVKIIRPSETAGRYVTYRFVV 206
>ref|XP_001758465.1| predicted protein [Physcomitrella patens]
gi|162690500|gb|EDQ76867.1| predicted protein
[Physcomitrella patens]
Length = 208
Score = 299 bits (765), Expect = 9e-79
Identities = 143/204 (70%), Positives = 176/204 (86%)
Frame = -3
Query: 803 SMDDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRD 624
S+D+ + R++RIR+TV++ML+DR Y+V D+E+ L+KE F K+G++P+++DL I K R
Sbjct: 5 SLDEQSARLYRIRKTVMEMLRDRDYVVADYELTLSKEQFREKYGDEPKREDLVIQKPRRS 64
Query: 623 KPSDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFH 444
++ IFVFFPE+AKVGVKTIKTYV+RMK E+V RAILVVQQ+LTPFAR + E K+H
Sbjct: 65 NNAEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMASKYH 124
Query: 443 LEVFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLK 264
LEVFQE+ELLVNIKEH LVP H+VLT +EKK+LLERYT+KETQLPRMQE+DPV RYYGLK
Sbjct: 125 LEVFQEAELLVNIKEHVLVPLHEVLTPDEKKTLLERYTVKETQLPRMQENDPVARYYGLK 184
Query: 263 RGQVVKIIRPSETAGRYVTYRFVV 192
RGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 185 RGQVVKIIRPSETAGRYVTYRFVV 208
>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
gi|255625665|gb|ACU13177.1| unknown [Glycine max]
Length = 206
Score = 298 bits (762), Expect = 2e-78
Identities = 142/202 (70%), Positives = 173/202 (85%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
++ R++RIR+TV+QML+DRG+LVGDFEIN++K +F SK+GE +++DL INK+ +D
Sbjct: 5 EEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNS 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
DQI+VFFP++ KVGVKT+KTY RM +E+V+RAILV Q +LTPFAR + E KFHLE
Sbjct: 65 GDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQE+ELLVNIKEH LVPEHQVLT EKK+LLERYT+KETQLPR+Q +DPV RYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFVV 192
QVVKIIRPSETAGRYVTYRFVV
Sbjct: 185 QVVKIIRPSETAGRYVTYRFVV 206
>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Solanum lycopersicum]
gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
isoform 2 [Solanum lycopersicum]
Length = 206
Score = 297 bits (761), Expect = 3e-78
Identities = 137/202 (67%), Positives = 175/202 (86%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
++ +++FR+R+T+++ML DRGYLVGDFEIN++K F+ K+GE+ +++DL I KA R+
Sbjct: 5 EEELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAKRNNS 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
SDQI+VFFPE+ KVGVKT+KTY ERMK E VF+AIL+VQQ+LTPFAR + E KFHLE
Sbjct: 65 SDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQE+E+LVNIK H L+PEHQ+L+ EEKK+LLERYT+KETQLPR+Q +DP+ RYYGLKRG
Sbjct: 125 VFQEAEMLVNIKNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFVV 192
QVVKIIRPSETAGRY+TYR+VV
Sbjct: 185 QVVKIIRPSETAGRYITYRYVV 206
>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 297 bits (760), Expect = 4e-78
Identities = 138/202 (68%), Positives = 175/202 (86%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
++ +R+FR+R+T+++ML DRGYLVGDFEIN++K +F+ K+GE+ +++DL + KA R+
Sbjct: 5 EEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKYEFLQKYGENMKREDLVLQKAKRNNS 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
SDQI+VFFPE+ KVGVKT+KTY ERMK E VF+AIL+VQQ+LTPFAR + E KFHLE
Sbjct: 65 SDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISIKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQE+E+LVNIK H L+P+HQ LT EEKK+LLERYT+KETQLPR+Q +DP+ RYYGLKRG
Sbjct: 125 VFQEAEMLVNIKNHVLIPKHQTLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFVV 192
QVVKIIRPSETAGRYVTYR+VV
Sbjct: 185 QVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 296 bits (758), Expect = 6e-78
Identities = 137/202 (67%), Positives = 174/202 (86%)
Frame = -3
Query: 797 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 618
++ +R+FR+R+T+++ML DRGYLVGDFEIN++K F+ K+GE+ +++DL + KA R+
Sbjct: 5 EEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVLQKAKRNNS 64
Query: 617 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 438
SDQI+VFFPE+ KVGVKT+KTY ERMK E VF+AIL+VQQ+LTPFAR + E KFHLE
Sbjct: 65 SDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFHLE 124
Query: 437 VFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRG 258
VFQE+E+LVNIK H L+PEH +L+ EEKKSLLERYT+KETQLPR+Q +DP+ RYYGLKRG
Sbjct: 125 VFQEAEMLVNIKNHVLIPEHLLLSPEEKKSLLERYTVKETQLPRIQITDPIARYYGLKRG 184
Query: 257 QVVKIIRPSETAGRYVTYRFVV 192
QVVKIIRPSETAGRY+TYR+VV
Sbjct: 185 QVVKIIRPSETAGRYITYRYVV 206
>emb|CBI28035.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 296 bits (757), Expect = 8e-78
Identities = 143/186 (76%), Positives = 165/186 (88%)
Frame = -3
Query: 749 MLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKPSDQIFVFFPEDAKVGV 570
MLKDRGY VGDFEIN+TK F+SKFGE+ +++DL INKA R SDQI+VFFPE+ KVGV
Sbjct: 1 MLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSSDQIYVFFPEEQKVGV 60
Query: 569 KTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLEVFQESELLVNIKEHTL 390
KT+KTY RMK+E+VFRAILVVQQ+LTPFAR + E KFHLEVFQE+ELLVNIKEH L
Sbjct: 61 KTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVL 120
Query: 389 VPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLKRGQVVKIIRPSETAGRYV 210
VPEHQVLT+EEKK+LLERYT+KETQLPR+Q SDP+ RY+GLKRGQVVKIIRPSETAGRY+
Sbjct: 121 VPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQVVKIIRPSETAGRYI 180
Query: 209 TYRFVV 192
TYR+VV
Sbjct: 181 TYRYVV 186
>ref|XP_001754558.1| predicted protein [Physcomitrella patens]
gi|162694179|gb|EDQ80528.1| predicted protein
[Physcomitrella patens]
Length = 208
Score = 296 bits (757), Expect = 8e-78
Identities = 140/204 (68%), Positives = 175/204 (85%)
Frame = -3
Query: 803 SMDDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRD 624
S+D+ R++RIR+TV++ML+DR Y+V +FE+N TKE+F K+G++P+++DL I K R
Sbjct: 5 SLDEQCARLYRIRKTVMEMLRDRDYVVAEFELNSTKEEFREKYGDEPKREDLVIQKPKRS 64
Query: 623 KPSDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFH 444
++ IFVFFPE+AKVGVKTIKTYV+RMK E+V RAILVVQQ+LTPFAR + E K+H
Sbjct: 65 NNAEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMSSKYH 124
Query: 443 LEVFQESELLVNIKEHTLVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYGLK 264
+EVFQE+ELLVNIK+H LVP+H+VL EEK +LL+RYT+KETQLPRMQE+DPV RYYGLK
Sbjct: 125 VEVFQEAELLVNIKDHVLVPQHEVLNAEEKITLLQRYTVKETQLPRMQENDPVARYYGLK 184
Query: 263 RGQVVKIIRPSETAGRYVTYRFVV 192
RGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 185 RGQVVKIIRPSETAGRYVTYRFVV 208