BLASTX nr result
ID: Ephedra28_contig00012749
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00012749
(1048 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003605589.1| Cytochrome b559 subunit alpha [Medicago trun... 171 5e-56
prf||1011228A cytochrome b559 222 2e-55
ref|XP_003606015.1| Cytochrome b559 subunit alpha [Medicago trun... 151 8e-50
ref|XP_004987318.1| PREDICTED: cytochrome b559 subunit alpha-lik... 149 2e-49
gb|EPS73485.1| cytochrome b559 subunit alpha [Genlisea aurea] 168 4e-48
ref|XP_002888378.1| hypothetical protein ARALYDRAFT_894035 [Arab... 171 4e-40
gb|EPS73280.1| cytochrome b559 subunit alpha, partial [Genlisea ... 171 6e-40
ref|YP_002519970.1| cytochrome b559 alpha chain (chloroplast) [E... 170 1e-39
gb|AER45593.1| psbE (chloroplast) [Halocarpus kirkii] 165 3e-38
ref|YP_002519766.1| cytochrome b559 alpha chain [Gnetum parvifol... 164 4e-38
ref|YP_008965047.1| cytochrome b559 alpha chain (chloroplast) [A... 162 2e-37
ref|YP_003934202.1| cytochrome b559 alpha chain [Cedrus deodara]... 162 2e-37
dbj|BAH11212.1| cytochrome b559 alpha chain (chloroplast) [Welwi... 162 3e-37
ref|YP_001876593.1| photosystem II cytochrome b559 alpha subunit... 162 3e-37
sp|Q9THZ3.4|PSBE_GINBI RecName: Full=Cytochrome b559 subunit alp... 161 3e-37
ref|NP_039315.1| photosystem II protein V [Marchantia polymorpha... 161 5e-37
ref|YP_007026156.1| photosystem II cytochrome b559 alpha subunit... 160 6e-37
ref|NP_042396.1| photosystem II protein V [Pinus thunbergii] gi|... 160 8e-37
pir||T14570 cytochrome b559 component psbE - beet chloroplast gi... 159 1e-36
ref|XP_006841194.1| hypothetical protein AMTR_s00334p00011530 [A... 159 1e-36
>ref|XP_003605589.1| Cytochrome b559 subunit alpha [Medicago truncatula]
gi|355506644|gb|AES87786.1| Cytochrome b559 subunit
alpha [Medicago truncatula]
Length = 153
Score = 171 bits (434), Expect(2) = 5e-56
Identities = 83/114 (72%), Positives = 93/114 (81%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSG+TGERSFADI+TSIRYW+IHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFTE++
Sbjct: 1 MSGSTGERSFADIITSIRYWIIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF*ETLMTIDRIYPIFTVRWLAIHGLAVPTVFF 544
Q +PLITGRFDSLEQL+ F +RWLA+HGLAVPTVFF
Sbjct: 61 QGIPLITGRFDSLEQLDEF-------------------IRWLAVHGLAVPTVFF 95
Score = 74.3 bits (181), Expect(2) = 5e-56
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +1
Query: 574 PTIKY*AMTQSNPNEQSVELNRTSLYWGLLLIFVLAVLFSSY 699
P Y AMTQSNPNEQ+VELNRTSLYWGLLLIFVLAVLFS+Y
Sbjct: 109 PNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNY 150
>prf||1011228A cytochrome b559
Length = 122
Score = 222 bits (566), Expect = 2e-55
Identities = 109/126 (86%), Positives = 118/126 (93%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSG+TGERSFADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFTE++
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF*ETLMTIDRIYPIFTVRWLAIHGLAVPTVFFLGSISA 562
Q +PLITGRFDSLEQL+ F++SF MTIDR YPIFTVRWLAIHGLAVPTV FLGSISA
Sbjct: 61 QGIPLITGRFDSLEQLDEFSRSF----MTIDRTYPIFTVRWLAIHGLAVPTVSFLGSISA 116
Query: 563 MQFIQR 580
MQFIQR
Sbjct: 117 MQFIQR 122
>ref|XP_003606015.1| Cytochrome b559 subunit alpha [Medicago truncatula]
gi|355507070|gb|AES88212.1| Cytochrome b559 subunit
alpha [Medicago truncatula]
Length = 136
Score = 151 bits (381), Expect(3) = 8e-50
Identities = 69/81 (85%), Positives = 78/81 (96%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSG+TGERSFADI+TSIRYW+IHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFTE++
Sbjct: 1 MSGSTGERSFADIITSIRYWIIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 383 QEVPLITGRFDSLEQLEHFTK 445
Q +PLITGRFDSLEQL+ F +
Sbjct: 61 QGIPLITGRFDSLEQLDEFIR 81
Score = 72.0 bits (175), Expect(3) = 8e-50
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +1
Query: 574 PTIKY*AMTQSNPNEQSVELNRTSLYWGLLLIFVLAVLFSSY 699
P Y A TQSNPNEQ+VELNRTSLYWGLLLIFVLAVLFS+Y
Sbjct: 92 PNPNYRATTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNY 133
Score = 23.1 bits (48), Expect(3) = 8e-50
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 555 FLQCSSSNDK 584
+LQCSSSNDK
Sbjct: 82 WLQCSSSNDK 91
>ref|XP_004987318.1| PREDICTED: cytochrome b559 subunit alpha-like [Setaria italica]
gi|514825361|ref|XP_004987334.1| PREDICTED: cytochrome
b559 subunit alpha-like [Setaria italica]
Length = 136
Score = 149 bits (375), Expect(3) = 2e-49
Identities = 69/81 (85%), Positives = 77/81 (95%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSG+TGERSFADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFTE++
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 383 QEVPLITGRFDSLEQLEHFTK 445
Q +PLIT RFDSLEQL+ F +
Sbjct: 61 QGIPLITDRFDSLEQLDEFMR 81
Score = 73.2 bits (178), Expect(3) = 2e-49
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +1
Query: 574 PTIKY*AMTQSNPNEQSVELNRTSLYWGLLLIFVLAVLFSSY 699
P Y MTQSNPNEQ+VELNRTSLYWGLLLIFVLAVLFS+Y
Sbjct: 92 PNSNYRTMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNY 133
Score = 23.1 bits (48), Expect(3) = 2e-49
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 555 FLQCSSSNDK 584
+LQCSSSNDK
Sbjct: 82 WLQCSSSNDK 91
>gb|EPS73485.1| cytochrome b559 subunit alpha [Genlisea aurea]
Length = 131
Score = 168 bits (426), Expect(2) = 4e-48
Identities = 82/125 (65%), Positives = 94/125 (75%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
M+G+TGER F+DI+TSIRYWVIHS+TIPSLFVAGW+FVSTGLAYD+FG+PRPNEYFTE +
Sbjct: 1 MAGSTGERPFSDIITSIRYWVIHSVTIPSLFVAGWIFVSTGLAYDIFGTPRPNEYFTEAR 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF*ETLMTIDRIYPIFTVRWLAIHGLAVPTVFFLGSISA 562
QE PLIT YPIFT RWLA+H LA+PTVFF+GSISA
Sbjct: 61 QEAPLITDPI----------------------TYPIFTFRWLAVHALAIPTVFFIGSISA 98
Query: 563 MQFIQ 577
MQFIQ
Sbjct: 99 MQFIQ 103
Score = 51.2 bits (121), Expect(2) = 4e-48
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +1
Query: 625 VELNRTSLYWGLLLIFVLAVLFSSY 699
+ELNRTSLYWGLLLIFVLAVLFSSY
Sbjct: 104 LELNRTSLYWGLLLIFVLAVLFSSY 128
>ref|XP_002888378.1| hypothetical protein ARALYDRAFT_894035 [Arabidopsis lyrata subsp.
lyrata] gi|297334219|gb|EFH64637.1| hypothetical protein
ARALYDRAFT_894035 [Arabidopsis lyrata subsp. lyrata]
Length = 136
Score = 171 bits (433), Expect = 4e-40
Identities = 84/119 (70%), Positives = 96/119 (80%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSG+TGERSFADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFTE++
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF*ETLMTIDRIYPIFTVRWLAIHGLAVPTVFFLGSIS 559
Q +PLITGRFD LEQL+ F +RWLA+HGLAVPTV FLG+++
Sbjct: 61 QGIPLITGRFDPLEQLDEF-------------------MRWLAVHGLAVPTVSFLGAMT 100
Score = 72.4 bits (176), Expect = 3e-10
Identities = 39/50 (78%), Positives = 42/50 (84%), Gaps = 5/50 (10%)
Frame = +1
Query: 565 AVH----PTIKY*-AMTQSNPNEQSVELNRTSLYWGLLLIFVLAVLFSSY 699
AVH PT+ + AMTQSNPNEQSVELNRTSLYWGLL IFVLAVLFS+Y
Sbjct: 84 AVHGLAVPTVSFLGAMTQSNPNEQSVELNRTSLYWGLLFIFVLAVLFSNY 133
>gb|EPS73280.1| cytochrome b559 subunit alpha, partial [Genlisea aurea]
Length = 95
Score = 171 bits (432), Expect = 6e-40
Identities = 84/114 (73%), Positives = 92/114 (80%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSG+TGERSFADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFTE++
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF*ETLMTIDRIYPIFTVRWLAIHGLAVPTVFF 544
Q +PLITGRFDSLEQL F +RWLA+HGLAVPTVFF
Sbjct: 61 QGIPLITGRFDSLEQLAEF-------------------IRWLAVHGLAVPTVFF 95
>ref|YP_002519970.1| cytochrome b559 alpha chain (chloroplast) [Ephedra equisetina]
gi|220983571|dbj|BAH11338.1| cytochrome b559 alpha chain
(chloroplast) [Ephedra equisetina]
Length = 83
Score = 170 bits (430), Expect = 1e-39
Identities = 82/83 (98%), Positives = 83/83 (100%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ
Sbjct: 1 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF 451
QEVPLITGRFDSLEQLE+FTKSF
Sbjct: 61 QEVPLITGRFDSLEQLENFTKSF 83
>gb|AER45593.1| psbE (chloroplast) [Halocarpus kirkii]
Length = 87
Score = 165 bits (417), Expect = 3e-38
Identities = 76/87 (87%), Positives = 85/87 (97%)
Frame = +2
Query: 191 LELHMSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYF 370
+EL MSGNTGER+FADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYF
Sbjct: 1 MELSMSGNTGERAFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYF 60
Query: 371 TENQQEVPLITGRFDSLEQLEHFTKSF 451
TE++QEVPL+TGRFDSLEQL+ FT+SF
Sbjct: 61 TESRQEVPLVTGRFDSLEQLDEFTRSF 87
>ref|YP_002519766.1| cytochrome b559 alpha chain [Gnetum parvifolium]
gi|512721591|ref|YP_008082211.1| cytochrome b559 alpha
chain (chloroplast) [Gnetum montanum]
gi|149941418|dbj|BAF64876.1| photosystem II protein V
[Gnetum parvifolium] gi|220983509|dbj|BAH11277.1|
cytochrome b559 alpha chain (chloroplast) [Gnetum
parvifolium] gi|482840918|dbj|BAN16926.1| cytochrome
b559 alpha chain (chloroplast) [Gnetum ula]
gi|490345036|gb|AGL11056.1| cytochrome b559 alpha chain
(chloroplast) [Gnetum montanum]
Length = 83
Score = 164 bits (416), Expect = 4e-38
Identities = 79/83 (95%), Positives = 81/83 (97%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSGNTGERSFADILTSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFTENQ
Sbjct: 1 MSGNTGERSFADILTSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTENQ 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF 451
QEVPLIT RF+SLEQLE FTKSF
Sbjct: 61 QEVPLITDRFNSLEQLEQFTKSF 83
>ref|YP_008965047.1| cytochrome b559 alpha chain (chloroplast) [Agathis dammara]
gi|347977320|dbj|BAK86777.1| cytochrome b559 alpha chain
(chloroplast) [Agathis dammara]
gi|354991441|gb|AER45594.1| psbE (chloroplast) [Agathis
australis] gi|563317631|dbj|BAO19731.1| cytochrome b559
alpha chain (chloroplast) [Agathis dammara]
Length = 83
Score = 162 bits (410), Expect = 2e-37
Identities = 75/83 (90%), Positives = 82/83 (98%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSGNTGER+FADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFTE++
Sbjct: 1 MSGNTGERAFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF 451
QEVPL+TGRFDSLEQL+ FTKSF
Sbjct: 61 QEVPLVTGRFDSLEQLDEFTKSF 83
>ref|YP_003934202.1| cytochrome b559 alpha chain [Cedrus deodara]
gi|353351849|ref|YP_004891731.1| cytochrome b559 alpha
chain (chloroplast) [Picea morrisonicola]
gi|523420636|ref|YP_008082810.1| cytochrome b559 alpha
chain (chloroplast) [Picea abies]
gi|307683277|dbj|BAJ19585.1| cytochrome b559 alpha chain
(chloroplast) [Cedrus deodara]
gi|307683633|dbj|BAJ19795.1| cytochrome b559 alpha chain
[Picea morrisonicola] gi|347977512|dbj|BAK86469.1|
cytochrome b559 alpha chain (chloroplast) [Picea
morrisonicola] gi|502524844|emb|CCW23094.1| cytochrome
b559 alpha chain (chloroplast) [Picea abies]
Length = 83
Score = 162 bits (410), Expect = 2e-37
Identities = 75/83 (90%), Positives = 82/83 (98%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSGNTGERSFADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFTE++
Sbjct: 1 MSGNTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF 451
QEVPL+TGRFDSLEQL+ FT+SF
Sbjct: 61 QEVPLVTGRFDSLEQLDEFTRSF 83
>dbj|BAH11212.1| cytochrome b559 alpha chain (chloroplast) [Welwitschia mirabilis]
Length = 83
Score = 162 bits (409), Expect = 3e-37
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSGNTGERSF DILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTE+Q
Sbjct: 1 MSGNTGERSFTDILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTEDQ 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF 451
+E+PLITGRFDSLEQLE FTK F
Sbjct: 61 REIPLITGRFDSLEQLERFTKYF 83
>ref|YP_001876593.1| photosystem II cytochrome b559 alpha subunit [Welwitschia
mirabilis] gi|163311648|gb|ABY26806.1| photosystem II
cytochrome b559 alpha subunit [Welwitschia mirabilis]
Length = 83
Score = 162 bits (409), Expect = 3e-37
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSGNTGERSF DILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTE+Q
Sbjct: 1 MSGNTGERSFTDILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTEDQ 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF 451
+E+PLITGRFDSLEQLE FTK F
Sbjct: 61 REIPLITGRFDSLEQLEQFTKYF 83
>sp|Q9THZ3.4|PSBE_GINBI RecName: Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
reaction center subunit V
Length = 83
Score = 161 bits (408), Expect = 3e-37
Identities = 75/83 (90%), Positives = 82/83 (98%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSGNTGERSFADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFT+++
Sbjct: 1 MSGNTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTDSR 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF 451
QEVPLITGRFDSLEQL+ FT+SF
Sbjct: 61 QEVPLITGRFDSLEQLDEFTRSF 83
>ref|NP_039315.1| photosystem II protein V [Marchantia polymorpha]
gi|330850647|ref|YP_004376528.1| photosystem II
cytochrome b559 alpha subunit [Ptilidium pulcherrimum]
gi|131304|sp|P06851.3|PSBE_MARPO RecName:
Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
reaction center subunit V gi|11689|emb|CAA28101.1| psbE
[Marchantia polymorpha] gi|302024776|gb|ADK89622.1|
photosystem II cytochrome b559 alpha subunit [Ptilidium
pulcherrimum]
Length = 83
Score = 161 bits (407), Expect = 5e-37
Identities = 75/83 (90%), Positives = 81/83 (97%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSGNTGER FADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFTEN+
Sbjct: 1 MSGNTGERPFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTENR 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF 451
QEVPLITGRF+SLEQ++ FTKSF
Sbjct: 61 QEVPLITGRFNSLEQIDEFTKSF 83
>ref|YP_007026156.1| photosystem II cytochrome b559 alpha subunit (chloroplast) [Pellia
endiviifolia] gi|408773119|gb|AFU88866.1| photosystem II
cytochrome b559 alpha subunit (chloroplast) [Pellia
endiviifolia]
Length = 83
Score = 160 bits (406), Expect = 6e-37
Identities = 75/83 (90%), Positives = 81/83 (97%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSGNTGER FADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFTEN+
Sbjct: 1 MSGNTGERPFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTENR 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF 451
QEVPLITGRF+SLEQ++ FTKSF
Sbjct: 61 QEVPLITGRFNSLEQIDDFTKSF 83
>ref|NP_042396.1| photosystem II protein V [Pinus thunbergii]
gi|29565605|ref|NP_817184.1| photosystem II protein V
[Pinus koraiensis] gi|222084101|ref|YP_002519554.1|
cytochrome b559 alpha chain [Keteleeria davidiana]
gi|512721648|ref|YP_008082266.1| photosystem II protein
V (chloroplast) [Pinus massoniana]
gi|512721722|ref|YP_008082339.1| photosystem II subunit
V (chloroplast) [Pinus taeda]
gi|1172678|sp|P41615.2|PSBE_PINTH RecName:
Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
reaction center subunit V
gi|31340255|sp|P59703.3|PSBE_PINKO RecName:
Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
reaction center subunit V gi|1262636|dbj|BAA04353.1|
PSII cytochrome b559 subunit [Pinus thunbergii]
gi|29469704|gb|AAO74032.1| PSII cytochrome b559 alpha
chain [Pinus koraiensis] gi|220983653|dbj|BAH11419.1|
cytochrome b559 alpha chain (chloroplast) [Keteleeria
davidiana] gi|257042594|gb|ACV32866.1| photosystem II
protein V [Pinus monticola] gi|356996608|gb|AET44525.1|
photosystem II protein V (chloroplast) [Pinus
chiapensis] gi|356996681|gb|AET44597.1| photosystem II
protein V (chloroplast) [Pinus cembroides]
gi|356996754|gb|AET44669.1| photosystem II protein V
(chloroplast) [Pinus caribaea]
gi|356996827|gb|AET44741.1| photosystem II protein V
(chloroplast) [Pinus bungeana]
gi|356996899|gb|AET44812.1| photosystem II protein V
(chloroplast) [Pinus brutia] gi|356996971|gb|AET44883.1|
photosystem II protein V (chloroplast) [Pinus arizonica]
gi|356997044|gb|AET44955.1| photosystem II protein V
(chloroplast) [Pinus amamiana]
gi|356997116|gb|AET45026.1| photosystem II protein V
(chloroplast) [Pinus yunnanensis]
gi|356997186|gb|AET45095.1| photosystem II protein V
(chloroplast) [Pinus yecorensis]
gi|356997259|gb|AET45167.1| photosystem II protein V
(chloroplast) [Pinus kwangtungensis]
gi|356997331|gb|AET45238.1| photosystem II protein V
(chloroplast) [Pinus wallichiana]
gi|356997403|gb|AET45309.1| photosystem II protein V
(chloroplast) [Pinus virginiana]
gi|356997475|gb|AET45380.1| photosystem II protein V
(chloroplast) [Pinus tropicalis]
gi|356997548|gb|AET45452.1| photosystem II protein V
(chloroplast) [Pinus taiwanensis]
gi|356997621|gb|AET45524.1| photosystem II protein V
(chloroplast) [Pinus sylvestris]
gi|356997694|gb|AET45596.1| photosystem II protein V
(chloroplast) [Pinus strobiformis]
gi|356997766|gb|AET45667.1| photosystem II protein V
(chloroplast) [Pinus serotina]
gi|356997839|gb|AET45739.1| photosystem II protein V
(chloroplast) [Pinus sabiniana]
gi|356997911|gb|AET45810.1| photosystem II protein V
(chloroplast) [Pinus roxburghii]
gi|356997984|gb|AET45882.1| photosystem II protein V
(chloroplast) [Pinus rigida] gi|356998057|gb|AET45954.1|
photosystem II protein V (chloroplast) [Pinus remota]
gi|356998130|gb|AET46026.1| photosystem II protein V
(chloroplast) [Pinus radiata]
gi|356998203|gb|AET46098.1| photosystem II protein V
(chloroplast) [Pinus quadrifolia]
gi|356998276|gb|AET46170.1| photosystem II protein V
(chloroplast) [Pinus pungens]
gi|356998349|gb|AET46242.1| photosystem II protein V
(chloroplast) [Pinus pumila] gi|356998563|gb|AET46453.1|
photosystem II protein V (chloroplast) [Pinus ponderosa
var. scopulorum] gi|356998636|gb|AET46525.1| photosystem
II protein V (chloroplast) [Pinus ponderosa var.
benthamiana] gi|356998709|gb|AET46597.1| photosystem II
protein V (chloroplast) [Pinus pinea]
gi|356998782|gb|AET46669.1| photosystem II protein V
(chloroplast) [Pinus pinceana]
gi|356998855|gb|AET46741.1| photosystem II protein V
(chloroplast) [Pinus patula] gi|356998928|gb|AET46813.1|
photosystem II protein V (chloroplast) [Pinus palustris]
gi|356999001|gb|AET46885.1| photosystem II protein V
(chloroplast) [Pinus occidentalis]
gi|356999074|gb|AET46957.1| photosystem II protein V
(chloroplast) [Pinus pseudostrobus var. apulcensis]
gi|356999147|gb|AET47029.1| photosystem II protein V
(chloroplast) [Pinus nigra] gi|356999220|gb|AET47101.1|
photosystem II protein V (chloroplast) [Pinus muricata]
gi|356999292|gb|AET47172.1| photosystem II protein V
(chloroplast) [Pinus mugo] gi|356999365|gb|AET47244.1|
photosystem II protein V (chloroplast) [Pinus
morrisonicola] gi|356999437|gb|AET47315.1| photosystem
II protein V (chloroplast) [Pinus montezumae]
gi|356999510|gb|AET47387.1| photosystem II protein V
(chloroplast) [Pinus maximartinezii]
gi|356999583|gb|AET47459.1| photosystem II protein V
(chloroplast) [Pinus massoniana]
gi|356999656|gb|AET47531.1| photosystem II protein V
(chloroplast) [Pinus lumholtzii]
gi|356999729|gb|AET47603.1| photosystem II protein V
(chloroplast) [Pinus leiophylla]
gi|356999802|gb|AET47675.1| photosystem II protein V
(chloroplast) [Pinus lawsonii]
gi|356999875|gb|AET47747.1| photosystem II protein V
(chloroplast) [Pinus pringlei]
gi|356999948|gb|AET47819.1| photosystem II protein V
(chloroplast) [Pinus latteri]
gi|357000021|gb|AET47891.1| photosystem II protein V
(chloroplast) [Pinus kesiya] gi|357000094|gb|AET47963.1|
photosystem II protein V (chloroplast) [Pinus johannis]
gi|357000167|gb|AET48035.1| photosystem II protein V
(chloroplast) [Pinus jeffreyi]
gi|357000240|gb|AET48107.1| photosystem II protein V
(chloroplast) [Pinus hwangshanensis]
gi|357000313|gb|AET48179.1| photosystem II protein V
(chloroplast) [Pinus heldreichii]
gi|357000385|gb|AET48250.1| photosystem II protein V
(chloroplast) [Pinus hartwegii]
gi|357000458|gb|AET48322.1| photosystem II protein V
(chloroplast) [Pinus halepensis]
gi|357000530|gb|AET48393.1| photosystem II protein V
(chloroplast) [Pinus greggii]
gi|357000603|gb|AET48465.1| photosystem II protein V
(chloroplast) [Pinus glabra] gi|357000676|gb|AET48537.1|
photosystem II protein V (chloroplast) [Pinus
fragilissima] gi|357000749|gb|AET48609.1| photosystem II
protein V (chloroplast) [Pinus engelmannii]
gi|357000822|gb|AET48681.1| photosystem II protein V
(chloroplast) [Pinus elliottii]
gi|357000895|gb|AET48753.1| photosystem II protein V
(chloroplast) [Pinus edulis] gi|357000968|gb|AET48825.1|
photosystem II protein V (chloroplast) [Pinus echinata]
gi|357001042|gb|AET48898.1| photosystem II protein V
(chloroplast) [Pinus douglasiana]
gi|357001117|gb|AET48972.1| photosystem II protein V
(chloroplast) [Pinus hartwegii]
gi|357001190|gb|AET49044.1| photosystem II protein V
(chloroplast) [Pinus discolor]
gi|357001263|gb|AET49116.1| photosystem II protein V
(chloroplast) [Pinus devoniana]
gi|357001336|gb|AET49188.1| photosystem II protein V
(chloroplast) [Pinus densata]
gi|357001409|gb|AET49260.1| photosystem II protein V
(chloroplast) [Pinus densiflora]
gi|357001482|gb|AET49332.1| photosystem II protein V
(chloroplast) [Pinus dalatensis]
gi|357001554|gb|AET49403.1| photosystem II protein V
(chloroplast) [Pinus fenzeliana var. dabeshanensis]
gi|357001623|gb|AET49471.1| photosystem II protein V
(chloroplast) [Pinus culminicola]
gi|357001696|gb|AET49543.1| photosystem II protein V
(chloroplast) [Pinus cubensis]
gi|357001769|gb|AET49615.1| photosystem II protein V
(chloroplast) [Pinus coulteri]
gi|357001842|gb|AET49687.1| photosystem II protein V
(chloroplast) [Pinus arizonica var. cooperi]
gi|357001915|gb|AET49759.1| photosystem II protein V
(chloroplast) [Pinus clausa] gi|490345110|gb|AGL11112.1|
photosystem II protein V (chloroplast) [Pinus
massoniana] gi|490345192|gb|AGL11185.1| photosystem II
subunit V (chloroplast) [Pinus taeda]
Length = 83
Score = 160 bits (405), Expect = 8e-37
Identities = 74/83 (89%), Positives = 81/83 (97%)
Frame = +2
Query: 203 MSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFTENQ 382
MSGNTGERSFADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFTE++
Sbjct: 1 MSGNTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 383 QEVPLITGRFDSLEQLEHFTKSF 451
QEVPL+TGRFD LEQL+ FT+SF
Sbjct: 61 QEVPLVTGRFDPLEQLDEFTRSF 83
>pir||T14570 cytochrome b559 component psbE - beet chloroplast
gi|860891|emb|CAA60967.1| PSII cytochome b559 alpha
chain [Beta vulgaris subsp. vulgaris]
gi|860897|emb|CAA60972.1| PSII cytochrome b599 alpha
chain [Beta vulgaris subsp. vulgaris]
Length = 118
Score = 159 bits (403), Expect = 1e-36
Identities = 74/87 (85%), Positives = 84/87 (96%)
Frame = +2
Query: 191 LELHMSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYF 370
+EL MSG+TGERSFADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYF
Sbjct: 32 VELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYF 91
Query: 371 TENQQEVPLITGRFDSLEQLEHFTKSF 451
TE++Q +PLITGRFDSLEQL+ F++SF
Sbjct: 92 TESRQGIPLITGRFDSLEQLDEFSRSF 118
>ref|XP_006841194.1| hypothetical protein AMTR_s00334p00011530 [Amborella trichopoda]
gi|548843101|gb|ERN02869.1| hypothetical protein
AMTR_s00334p00011530 [Amborella trichopoda]
Length = 162
Score = 159 bits (403), Expect = 1e-36
Identities = 75/86 (87%), Positives = 83/86 (96%)
Frame = +2
Query: 194 ELHMSGNTGERSFADILTSIRYWVIHSITIPSLFVAGWLFVSTGLAYDVFGSPRPNEYFT 373
EL MSG+TGERSFADI+TSIRYWVIHSITIPSLF+AGWLFVSTGLAYDVFGSPRPNEYFT
Sbjct: 77 ELKMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFT 136
Query: 374 ENQQEVPLITGRFDSLEQLEHFTKSF 451
E++Q VPLITGRFDSLEQL+ F++SF
Sbjct: 137 ESRQGVPLITGRFDSLEQLDEFSRSF 162