BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012739
         (987 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16629.1| unknown [Picea sitchensis]                             483   e-134
ref|XP_002964108.1| hypothetical protein SELMODRAFT_405784 [Sela...   439   e-121
ref|XP_002992062.1| hypothetical protein SELMODRAFT_162108 [Sela...   439   e-121
ref|XP_001780285.1| predicted protein [Physcomitrella patens] gi...   438   e-120
gb|EOY08863.1| DNA gyrase subunit B isoform 3 [Theobroma cacao]       436   e-120
gb|EOY08862.1| DNA gyrase subunit B isoform 2 [Theobroma cacao]       436   e-120
gb|EOY08861.1| Dna gyrase b2 isoform 1 [Theobroma cacao]              436   e-120
gb|EMJ05458.1| hypothetical protein PRUPE_ppa001942mg [Prunus pe...   436   e-120
ref|XP_006850688.1| hypothetical protein AMTR_s00034p00235670 [A...   434   e-119
sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chlor...   434   e-119
ref|XP_004493400.1| PREDICTED: DNA gyrase subunit B, chloroplast...   434   e-119
ref|XP_002307976.2| hypothetical protein POPTR_0006s03770g [Popu...   434   e-119
ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplast...   434   e-119
ref|XP_001785766.1| predicted protein [Physcomitrella patens] gi...   434   e-119
gb|EAZ11364.1| hypothetical protein OsJ_01229 [Oryza sativa Japo...   432   e-119
ref|NP_001042691.1| Os01g0268300 [Oryza sativa Japonica Group] g...   432   e-119
ref|XP_006355766.1| PREDICTED: DNA gyrase subunit B, chloroplast...   432   e-118
ref|XP_002873136.1| hypothetical protein ARALYDRAFT_487191 [Arab...   432   e-118
ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplast...   432   e-118
ref|XP_004252016.1| PREDICTED: DNA gyrase subunit B, chloroplast...   431   e-118

>gb|ABR16629.1| unknown [Picea sitchensis]
          Length = 737

 Score =  483 bits (1243), Expect = e-134
 Identities = 236/328 (71%), Positives = 279/328 (85%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            +DEAQAGFAT+I++++  DGSVSI D+GRGIPTD+HP T KS+LETVLTVLHAGGKFGGE
Sbjct: 138  IDEAQAGFATNIDVIIFLDGSVSIMDDGRGIPTDLHPVTHKSALETVLTVLHAGGKFGGE 197

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVG+SVVNALS++LEVTVWR+ KEW Q F  G PVTELTS  I  + + 
Sbjct: 198  SSGYSVSGGLHGVGLSVVNALSEKLEVTVWRDGKEWNQTFACGKPVTELTSNEILGEFKF 257

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQEMEEGK-VTSNEYY 538
             QGTRV+F PD EVF TTT FDYNTI  RARE+AFLNP+VKITLKQE ++ + VT NEY+
Sbjct: 258  RQGTRVRFWPDKEVFTTTTEFDYNTIVGRARELAFLNPQVKITLKQENKDAENVTYNEYH 317

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            +AGGL EYV +LN++K  + +P S  +EKDGV VNVALQWCSD+Y + LLGYANSIRT D
Sbjct: 318  YAGGLVEYVCWLNRDKTPILKPISFTREKDGVIVNVALQWCSDAYTDTLLGYANSIRTSD 377

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GGSHMDG+KSA+TR  NN+GR+  ++K+KDENLSGEHVREGLTGIVSVK+ KPEFEGQTK
Sbjct: 378  GGSHMDGVKSALTRTFNNLGRKSKLIKEKDENLSGEHVREGLTGIVSVKVPKPEFEGQTK 437

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVR+IVDQAV +Y  +YL+CNP
Sbjct: 438  TRLGNPEVRRIVDQAVQEYLTEYLECNP 465


>ref|XP_002964108.1| hypothetical protein SELMODRAFT_405784 [Selaginella moellendorffii]
            gi|300167837|gb|EFJ34441.1| hypothetical protein
            SELMODRAFT_405784 [Selaginella moellendorffii]
          Length = 723

 Score =  439 bits (1129), Expect = e-121
 Identities = 210/327 (64%), Positives = 264/327 (80%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            +DE QAGFAT +++VLHSDGSVSITDNGRGIPTD+HPAT KS+LETVLTVLHAGGKFGG+
Sbjct: 128  IDEVQAGFATQVDVVLHSDGSVSITDNGRGIPTDVHPATGKSTLETVLTVLHAGGKFGGD 187

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
            +SGY+VSGGLHGVG+SVVNALSKRLE TVWRN +E++Q+F+RG  V  LT+  +  +S  
Sbjct: 188  ESGYTVSGGLHGVGVSVVNALSKRLEATVWRNGQEYRQVFQRGKAVGSLTTRSLPRESSS 247

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQEMEEGKVTSNEYYF 541
              GT VKFLPDDEVF TTT FD N ++ R REVAFLNP+V I LK   EE   T   ++F
Sbjct: 248  RTGTCVKFLPDDEVFTTTTAFDPNIVSSRLREVAFLNPEVTINLK---EESATTDEVFHF 304

Query: 542  AGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTIDG 721
             GGL EYV++LNQ+K ++H P S + EKD ++VNV++QWCSD+Y++ LLGYANSIRT DG
Sbjct: 305  GGGLVEYVEWLNQDKTKIHDPISFSVEKDDISVNVSMQWCSDAYSDTLLGYANSIRTADG 364

Query: 722  GSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTKT 901
            G+H+DGLK  +TR +N +GR+   +++K +NLSGEH REGLT ++SVK+ +PEFEGQTKT
Sbjct: 365  GTHLDGLKMGLTRTLNILGRRSKAIREKGDNLSGEHAREGLTCVISVKVPEPEFEGQTKT 424

Query: 902  RLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            RLGN EVRKIV+QAV +   +YL+  P
Sbjct: 425  RLGNVEVRKIVEQAVIEQVTEYLEFRP 451


>ref|XP_002992062.1| hypothetical protein SELMODRAFT_162108 [Selaginella moellendorffii]
           gi|300140184|gb|EFJ06911.1| hypothetical protein
           SELMODRAFT_162108 [Selaginella moellendorffii]
          Length = 618

 Score =  439 bits (1129), Expect = e-121
 Identities = 210/327 (64%), Positives = 264/327 (80%)
 Frame = +2

Query: 2   VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
           +DE QAGFAT +++VLHSDGSVSITDNGRGIPTD+HPAT KS+LETVLTVLHAGGKFGG+
Sbjct: 23  IDEVQAGFATQVDVVLHSDGSVSITDNGRGIPTDVHPATGKSTLETVLTVLHAGGKFGGD 82

Query: 182 QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
           +SGY+VSGGLHGVG+SVVNALSKRLE TVWRN +E++Q+F+RG  V  LT+  +  +S  
Sbjct: 83  ESGYTVSGGLHGVGVSVVNALSKRLEATVWRNGQEYRQVFQRGKAVGSLTTRSLPRESSS 142

Query: 362 NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQEMEEGKVTSNEYYF 541
             GT VKFLPDDEVF TTT FD N ++ R REVAFLNP+V I LK   EE   T   ++F
Sbjct: 143 RTGTCVKFLPDDEVFTTTTAFDPNIVSSRLREVAFLNPEVTINLK---EESATTDEVFHF 199

Query: 542 AGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTIDG 721
            GGL EYV++LNQ+K ++H P S + EKD ++VNV++QWCSD+Y++ LLGYANSIRT DG
Sbjct: 200 GGGLVEYVEWLNQDKTKIHDPISFSVEKDDISVNVSMQWCSDAYSDTLLGYANSIRTADG 259

Query: 722 GSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTKT 901
           G+H+DGLK  +TR +N +GR+   +++K +NLSGEH REGLT ++SVK+ +PEFEGQTKT
Sbjct: 260 GTHLDGLKMGLTRTLNILGRRSKAIREKGDNLSGEHAREGLTCVISVKVPEPEFEGQTKT 319

Query: 902 RLGNPEVRKIVDQAVYDYFMDYLQCNP 982
           RLGN EVRKIV+QAV +   +YL+  P
Sbjct: 320 RLGNVEVRKIVEQAVIEQVTEYLEFRP 346


>ref|XP_001780285.1| predicted protein [Physcomitrella patens] gi|162668339|gb|EDQ54949.1|
            predicted protein [Physcomitrella patens]
          Length = 640

 Score =  438 bits (1127), Expect = e-120
 Identities = 211/331 (63%), Positives = 274/331 (82%), Gaps = 4/331 (1%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            +DEAQAGFA+ +++V+H+DGSVSI+DNGRGIPTD+HP T+KS+LETVLTVLHAGGKFGGE
Sbjct: 38   IDEAQAGFASTVDVVIHTDGSVSISDNGRGIPTDVHPVTRKSALETVLTVLHAGGKFGGE 97

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVGISVVNALS+R++VTVWRN  E++Q FE G  V+ L++  +  D + 
Sbjct: 98   SSGYSVSGGLHGVGISVVNALSERVDVTVWRNGHEYRQSFEFGKAVSPLSAFPLPNDQKG 157

Query: 362  NQGTRVKFLPDDE---VFITTTTFDYNTIAERAREVAFLNPKVKITLKQEMEEG-KVTSN 529
              GTRVKFLPD +   +F +TT FDYNTI+ RARE+AFLNP+V I L QE     KV SN
Sbjct: 158  RTGTRVKFLPDKQGKQLFTSTTEFDYNTISGRARELAFLNPQVTINLMQEHANSEKVRSN 217

Query: 530  EYYFAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIR 709
             Y+F+GGL+EYV +LN +K +LH+P S+++E++GVA++VALQW +D Y + +LGYANSIR
Sbjct: 218  AYHFSGGLNEYVLWLNNDKERLHEPISIHREREGVAIDVALQWSADQYTDTILGYANSIR 277

Query: 710  TIDGGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEG 889
            T DGG+H+DG+K+A+TR +N +GR+  I+K+KDENLSG+H REGLT +V+VK+  PEFEG
Sbjct: 278  TSDGGTHLDGMKAAVTRTLNTLGRKAKILKEKDENLSGDHAREGLTCVVAVKVPNPEFEG 337

Query: 890  QTKTRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            QTKTRLGNPEVR+IVDQAV +   +YL+ +P
Sbjct: 338  QTKTRLGNPEVRRIVDQAVQELVTEYLEQHP 368


>gb|EOY08863.1| DNA gyrase subunit B isoform 3 [Theobroma cacao]
          Length = 534

 Score =  436 bits (1122), Expect = e-120
 Identities = 211/328 (64%), Positives = 266/328 (81%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAGFAT IN+VL SDGSVSITDNGRGIPTD+HP TKKS+LETVLTVLHAGGKFGG 
Sbjct: 127  VDEAQAGFATQINVVLLSDGSVSITDNGRGIPTDLHPITKKSALETVLTVLHAGGKFGGS 186

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVG+SVVNALS+ LEVTVWR+  E++Q + RG PV+ LT   +  +S+ 
Sbjct: 187  SSGYSVSGGLHGVGLSVVNALSETLEVTVWRDGMEYEQKYSRGKPVSTLTCHVLSTESKH 246

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQE-MEEGKVTSNEYY 538
             QGT ++F PD E+F T   FDYNT+A R RE+AFLNPK+ ITLK+E     K   NEY+
Sbjct: 247  RQGTCIRFWPDKEIFTTAIEFDYNTLAGRIRELAFLNPKLTITLKKEDNNPEKSLYNEYF 306

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            FAGGL EYV++LN +K  LH     ++  DG  ++VALQWCSD+Y++ +LGYANSIRTID
Sbjct: 307  FAGGLVEYVKWLNTDKKPLHDVLGFSRRIDGATIDVALQWCSDAYSDTMLGYANSIRTID 366

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H++G+K+++TR +NN+G++  ++KDKD +LSGEHVREGLT I+SVKI  PEFEGQTK
Sbjct: 367  GGTHIEGVKASLTRTLNNLGKKSKVIKDKDISLSGEHVREGLTCIISVKIPNPEFEGQTK 426

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVRK+VDQ+V ++  ++L+ +P
Sbjct: 427  TRLGNPEVRKVVDQSVQEFLAEFLELHP 454


>gb|EOY08862.1| DNA gyrase subunit B isoform 2 [Theobroma cacao]
          Length = 572

 Score =  436 bits (1122), Expect = e-120
 Identities = 211/328 (64%), Positives = 266/328 (81%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAGFAT IN+VL SDGSVSITDNGRGIPTD+HP TKKS+LETVLTVLHAGGKFGG 
Sbjct: 127  VDEAQAGFATQINVVLLSDGSVSITDNGRGIPTDLHPITKKSALETVLTVLHAGGKFGGS 186

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVG+SVVNALS+ LEVTVWR+  E++Q + RG PV+ LT   +  +S+ 
Sbjct: 187  SSGYSVSGGLHGVGLSVVNALSETLEVTVWRDGMEYEQKYSRGKPVSTLTCHVLSTESKH 246

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQE-MEEGKVTSNEYY 538
             QGT ++F PD E+F T   FDYNT+A R RE+AFLNPK+ ITLK+E     K   NEY+
Sbjct: 247  RQGTCIRFWPDKEIFTTAIEFDYNTLAGRIRELAFLNPKLTITLKKEDNNPEKSLYNEYF 306

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            FAGGL EYV++LN +K  LH     ++  DG  ++VALQWCSD+Y++ +LGYANSIRTID
Sbjct: 307  FAGGLVEYVKWLNTDKKPLHDVLGFSRRIDGATIDVALQWCSDAYSDTMLGYANSIRTID 366

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H++G+K+++TR +NN+G++  ++KDKD +LSGEHVREGLT I+SVKI  PEFEGQTK
Sbjct: 367  GGTHIEGVKASLTRTLNNLGKKSKVIKDKDISLSGEHVREGLTCIISVKIPNPEFEGQTK 426

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVRK+VDQ+V ++  ++L+ +P
Sbjct: 427  TRLGNPEVRKVVDQSVQEFLAEFLELHP 454


>gb|EOY08861.1| Dna gyrase b2 isoform 1 [Theobroma cacao]
          Length = 726

 Score =  436 bits (1122), Expect = e-120
 Identities = 211/328 (64%), Positives = 266/328 (81%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAGFAT IN+VL SDGSVSITDNGRGIPTD+HP TKKS+LETVLTVLHAGGKFGG 
Sbjct: 127  VDEAQAGFATQINVVLLSDGSVSITDNGRGIPTDLHPITKKSALETVLTVLHAGGKFGGS 186

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVG+SVVNALS+ LEVTVWR+  E++Q + RG PV+ LT   +  +S+ 
Sbjct: 187  SSGYSVSGGLHGVGLSVVNALSETLEVTVWRDGMEYEQKYSRGKPVSTLTCHVLSTESKH 246

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQE-MEEGKVTSNEYY 538
             QGT ++F PD E+F T   FDYNT+A R RE+AFLNPK+ ITLK+E     K   NEY+
Sbjct: 247  RQGTCIRFWPDKEIFTTAIEFDYNTLAGRIRELAFLNPKLTITLKKEDNNPEKSLYNEYF 306

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            FAGGL EYV++LN +K  LH     ++  DG  ++VALQWCSD+Y++ +LGYANSIRTID
Sbjct: 307  FAGGLVEYVKWLNTDKKPLHDVLGFSRRIDGATIDVALQWCSDAYSDTMLGYANSIRTID 366

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H++G+K+++TR +NN+G++  ++KDKD +LSGEHVREGLT I+SVKI  PEFEGQTK
Sbjct: 367  GGTHIEGVKASLTRTLNNLGKKSKVIKDKDISLSGEHVREGLTCIISVKIPNPEFEGQTK 426

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVRK+VDQ+V ++  ++L+ +P
Sbjct: 427  TRLGNPEVRKVVDQSVQEFLAEFLELHP 454


>gb|EMJ05458.1| hypothetical protein PRUPE_ppa001942mg [Prunus persica]
          Length = 738

 Score =  436 bits (1121), Expect = e-120
 Identities = 210/328 (64%), Positives = 266/328 (81%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAGFAT I +VL +DGSVSI DNGRGIPTDMHPATKKS+LETVLTVLHAGGKFGG 
Sbjct: 139  VDEAQAGFATKIEVVLLADGSVSIADNGRGIPTDMHPATKKSALETVLTVLHAGGKFGGS 198

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVG+SVVNALS+ LEVTVWR+  E++Q + RG PVT L+   +  +S+ 
Sbjct: 199  SSGYSVSGGLHGVGLSVVNALSETLEVTVWRDGMEYQQKYSRGKPVTTLSCHVLPIESQD 258

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQE-MEEGKVTSNEYY 538
             QGTR++F PD EVF T   FDYNTIA R RE+AFLNP + ITL+QE  +  K   NEY+
Sbjct: 259  RQGTRIRFWPDKEVFTTAIHFDYNTIAGRIRELAFLNPNLMITLRQEDTDPEKNHHNEYF 318

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            +AGGL EYV++LN +K  LH      KE DG+ ++VALQWCSD+Y++ +LGYANSIRT+D
Sbjct: 319  YAGGLVEYVRWLNTDKKPLHDVVGFRKEVDGITIDVALQWCSDAYSDTMLGYANSIRTVD 378

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H+DG K+++TR +N++G++  I+K+KD  LSGEHVREGLT ++SVK++ PEFEGQTK
Sbjct: 379  GGTHIDGTKASLTRTLNSLGKKSKIIKEKDITLSGEHVREGLTCVISVKVANPEFEGQTK 438

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVR++VDQ++ +Y  +YL+ +P
Sbjct: 439  TRLGNPEVRRVVDQSLQEYLTEYLELHP 466


>ref|XP_006850688.1| hypothetical protein AMTR_s00034p00235670 [Amborella trichopoda]
            gi|548854357|gb|ERN12269.1| hypothetical protein
            AMTR_s00034p00235670 [Amborella trichopoda]
          Length = 747

 Score =  434 bits (1117), Expect = e-119
 Identities = 209/328 (63%), Positives = 267/328 (81%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            +DEAQAGFAT +++VLHSD SVSITDNGRGIPT+ H  TKKS+LETVLTVLHAGGKFGG 
Sbjct: 149  IDEAQAGFATRVDVVLHSDNSVSITDNGRGIPTEFHQVTKKSALETVLTVLHAGGKFGGS 208

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
            +SGYSVSGGLHGVG+SVVNALS+ LE+TVWR+ +E++Q + RG PVT+LTS  +  +   
Sbjct: 209  RSGYSVSGGLHGVGLSVVNALSEALEITVWRDGREYQQTYSRGKPVTDLTSHMLPTELNS 268

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITL-KQEMEEGKVTSNEYY 538
             QGT ++F PD EVF TT +FDYNTIA R RE+AFLN  + ITL K +M+  K   NEY 
Sbjct: 269  RQGTCIRFWPDREVFTTTISFDYNTIAGRIRELAFLNTDLAITLTKMDMDSQKAQYNEYC 328

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            +AGGL EYV++LN +K  +H P  + K+ DG+ V+VALQWCSD+Y + LLGYANSIRT+D
Sbjct: 329  YAGGLVEYVKWLNTDKKPIHDPVFLQKKADGITVDVALQWCSDAYTDTLLGYANSIRTVD 388

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H+DGLK+++TR +NN+G++  ++K+ D NLSGEHVREGLT IVSVK+  PEFEGQTK
Sbjct: 389  GGTHIDGLKASLTRTLNNLGKKSKVIKE-DINLSGEHVREGLTCIVSVKVPNPEFEGQTK 447

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVR++VDQ+V ++  +YL+ +P
Sbjct: 448  TRLGNPEVRRVVDQSVQEHLTEYLELHP 475


>sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017095|gb|AAR07943.1| DNA gyrase B
            subunit [Nicotiana benthamiana]
          Length = 731

 Score =  434 bits (1117), Expect = e-119
 Identities = 206/328 (62%), Positives = 265/328 (80%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAGFAT I++VLH+D SVSI DNGRGIPT++HP TKKSSLETVLTVLHAGGKFGG 
Sbjct: 132  VDEAQAGFATKIDVVLHADNSVSIADNGRGIPTELHPVTKKSSLETVLTVLHAGGKFGGS 191

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGY+VSGGLHGVG+SVVNALS+ LEVT+WR+ KE++Q + RG P+T L    +  +   
Sbjct: 192  SSGYNVSGGLHGVGLSVVNALSQALEVTIWRDGKEYQQKYSRGKPITTLICHDLPVEMRD 251

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQE-MEEGKVTSNEYY 538
             QGT ++F PD EVF T   FDYNTIA R RE+AFLNP++ I LK+E ++  K+  NEY+
Sbjct: 252  RQGTAIRFWPDKEVFTTEMQFDYNTIAGRIRELAFLNPELTIALKKEDIDPEKIQCNEYF 311

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            +AGGL EYV++LN +K  LH      KE DG+ +++ALQWCSD+Y++ +LGYANSIRTID
Sbjct: 312  YAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMALQWCSDAYSDTMLGYANSIRTID 371

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H+DG+K+A+TR +NN+G++   +K+KD +LSGEHVREGLT ++SVK+  PEFEGQTK
Sbjct: 372  GGTHIDGVKAALTRILNNLGKKSKTIKEKDISLSGEHVREGLTCVISVKVPNPEFEGQTK 431

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVRK+VDQ+V +Y  +YL+ +P
Sbjct: 432  TRLGNPEVRKVVDQSVQEYLTEYLELHP 459


>ref|XP_004493400.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Cicer arietinum]
          Length = 732

 Score =  434 bits (1116), Expect = e-119
 Identities = 206/328 (62%), Positives = 267/328 (81%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAGFA+ I++VLH+D SVSITDNGRGIPTDMHP TKKS+LETVLT+LHAGGKFGG 
Sbjct: 133  VDEAQAGFASKIDVVLHADDSVSITDNGRGIPTDMHPVTKKSALETVLTILHAGGKFGGI 192

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVG+SVVNALS+ LEVTVWR+  E+ Q + RG PVT L    +  +++ 
Sbjct: 193  NSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGLEYTQTYSRGKPVTTLNCVMLPFENKD 252

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITL-KQEMEEGKVTSNEYY 538
             QGT++KF PD EVF T   F+YNTIA R RE+AFLNPK+ I L K++ +  K  SNEY+
Sbjct: 253  RQGTQIKFWPDKEVFTTAIQFEYNTIAGRIRELAFLNPKLTIALRKEDNDPEKNLSNEYF 312

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            +AGGL+EYV++LN +K  +H   S  KE DG+ V++ALQWC D+Y++ +LGYANSIRT+D
Sbjct: 313  YAGGLAEYVKWLNTDKKAVHDVLSFRKEIDGITVDIALQWCEDAYSDTILGYANSIRTVD 372

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H+DG+K+++TR +N++G++  ++K+KD  LSGEHVREGLT +VSVK+  PEFEGQTK
Sbjct: 373  GGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEHVREGLTCVVSVKVPNPEFEGQTK 432

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVRK+VDQ++ +Y  +YL+ +P
Sbjct: 433  TRLGNPEVRKVVDQSIQEYLTEYLELHP 460


>ref|XP_002307976.2| hypothetical protein POPTR_0006s03770g [Populus trichocarpa]
            gi|550335399|gb|EEE91499.2| hypothetical protein
            POPTR_0006s03770g [Populus trichocarpa]
          Length = 733

 Score =  434 bits (1115), Expect = e-119
 Identities = 207/328 (63%), Positives = 267/328 (81%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAG+A+ IN+VLHSD S+SITDNGRGIPTD+H  TKKS+LETVLTVLHAGGKFGG 
Sbjct: 134  VDEAQAGYASKINVVLHSDNSISITDNGRGIPTDLHQVTKKSALETVLTVLHAGGKFGGS 193

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVG+SVVNALS+ LEVTVWR+ KE++Q + RG PVT L    +  +S+ 
Sbjct: 194  NSGYSVSGGLHGVGLSVVNALSEELEVTVWRDGKEYQQKYSRGNPVTTLMCYELSAESKD 253

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQE-MEEGKVTSNEYY 538
             +GTR++F PD EVF T   FDYNT+  R RE+AFLNPK+ I+LK+E  +  K   +E++
Sbjct: 254  QKGTRIRFWPDKEVFTTEIQFDYNTVGGRVRELAFLNPKLAISLKKEDNDPEKNQYDEHF 313

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            +AGGL EYV +LN +K  LH   S  KE DG+A+++ALQWCSD+Y++ +LGYANSIRT+D
Sbjct: 314  YAGGLIEYVNWLNTDKKSLHDVVSFRKEVDGIAIDMALQWCSDAYSDTILGYANSIRTVD 373

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H+DG+K+++TR +NN G++  ++KDKD +LSGEHVREGLT I+SVK+  PEFEGQTK
Sbjct: 374  GGTHIDGVKASLTRTLNNFGKKSKVIKDKDISLSGEHVREGLTCIISVKVPSPEFEGQTK 433

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVRK+V+Q+V +Y  +YL+ +P
Sbjct: 434  TRLGNPEVRKVVEQSVQEYLTEYLELHP 461


>ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 719

 Score =  434 bits (1115), Expect = e-119
 Identities = 207/328 (63%), Positives = 266/328 (81%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAGFA+ I++VLH+D SVS+ DNGRGIPTD+HP TKKSSLETVLTVLHAGGKFGG 
Sbjct: 120  VDEAQAGFASQIDVVLHADNSVSVADNGRGIPTDLHPVTKKSSLETVLTVLHAGGKFGGS 179

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVG+SVVNALS+ LEV++WR+  E+ Q + RG P + LTS     + + 
Sbjct: 180  SSGYSVSGGLHGVGLSVVNALSESLEVSIWRDGNEFHQKYSRGKPASILTSHVPSSELKN 239

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITL-KQEMEEGKVTSNEYY 538
            +QGT ++F PD EVF T   FDYNTI+ R RE+AFLNPK+ ITL K++ +  K   NEY 
Sbjct: 240  HQGTHIRFWPDKEVFTTGIQFDYNTISGRIRELAFLNPKLTITLTKEDNDLEKNQYNEYC 299

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            +AGGL EYV +LN +KN +H+ F   KE DGVA++VALQWC+D+Y++ +LGYANSIRTID
Sbjct: 300  YAGGLVEYVAWLNSDKNPIHEVFGFRKETDGVAIDVALQWCADAYSDTILGYANSIRTID 359

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H+DG+K+++TR +NN+G++  I KDKD +LSGEHVREGLT +VSV++  PEFEGQTK
Sbjct: 360  GGTHIDGMKASLTRTLNNLGKKSKIFKDKDISLSGEHVREGLTCVVSVRVRNPEFEGQTK 419

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVRK+V+Q++ +Y  +YL+ +P
Sbjct: 420  TRLGNPEVRKVVEQSIQEYLTEYLELHP 447


>ref|XP_001785766.1| predicted protein [Physcomitrella patens] gi|162662596|gb|EDQ49430.1|
            predicted protein [Physcomitrella patens]
          Length = 642

 Score =  434 bits (1115), Expect = e-119
 Identities = 207/333 (62%), Positives = 272/333 (81%), Gaps = 6/333 (1%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            +DEAQAGFA+ ++IV+H+DGSVSI+DNGRGIPTD+HP T KS+LETVLTVLHAGGKFGG+
Sbjct: 38   IDEAQAGFASTVDIVMHTDGSVSISDNGRGIPTDVHPVTGKSALETVLTVLHAGGKFGGD 97

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVGISVVNALS+R++VTVWRN  E+KQ FE G  V+ L+   +  D + 
Sbjct: 98   NSGYSVSGGLHGVGISVVNALSERVDVTVWRNGHEYKQSFEFGKSVSHLSGSRLPRDQKG 157

Query: 362  NQGTRVKFLPDDE-----VFITTTTFDYNTIAERAREVAFLNPKVKITLKQE-MEEGKVT 523
              GT VKFLPD +     +F +TT FDY+TI+ R RE+AFLNP+V I LKQ+     K+ 
Sbjct: 158  RTGTLVKFLPDKQGKSFLMFTSTTEFDYSTISGRTRELAFLNPQVTIYLKQDHANPEKIR 217

Query: 524  SNEYYFAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANS 703
            SN Y+F+GGLSEYV +LN +K +LH+P S++++K+G+ ++V+LQWC+DSY + ++GYANS
Sbjct: 218  SNTYHFSGGLSEYVLWLNNDKERLHEPISIHRKKEGIIIDVSLQWCADSYTDTIIGYANS 277

Query: 704  IRTIDGGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEF 883
            IRT DGG+H+DG+K+A+TR +N +GR+  I+K+KDENLSG+H REGLT +VSVK+  PEF
Sbjct: 278  IRTSDGGTHLDGIKAAVTRTLNTLGRKAKILKEKDENLSGDHAREGLTCVVSVKVPNPEF 337

Query: 884  EGQTKTRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            EGQTKTRLGNPEVR++VDQAV +   +YL+ +P
Sbjct: 338  EGQTKTRLGNPEVRRLVDQAVQELVTEYLEQHP 370


>gb|EAZ11364.1| hypothetical protein OsJ_01229 [Oryza sativa Japonica Group]
          Length = 753

 Score =  432 bits (1112), Expect = e-119
 Identities = 201/327 (61%), Positives = 266/327 (81%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAG+AT ++++LH D SVS+TDNGRGIPTD+HP TKKS +ETVLT++HAGGKFGG 
Sbjct: 155  VDEAQAGYATKVDVILHGDNSVSVTDNGRGIPTDIHPQTKKSCVETVLTLMHAGGKFGGS 214

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
            +SGY+VSGGLHGVG+SVVNALS+ LEVTVWR+ KE++Q + RG  +T LTS  + ++S  
Sbjct: 215  KSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQNYSRGKAITMLTSRTLSDESSS 274

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQEMEEGKVTSNEYYF 541
             QGTR++F PD  +F TT  FD+NTIA R RE+AFLNP++ I L +E ++ +V  NEY +
Sbjct: 275  RQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNPELTIALTKEEDDLQVQHNEYCY 334

Query: 542  AGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTIDG 721
            AGGL EYV++LN +K  LH P +  KE DG+ V+V+LQWCSDSY++ +LGYANSIRTIDG
Sbjct: 335  AGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSLQWCSDSYSDTVLGYANSIRTIDG 394

Query: 722  GSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTKT 901
            G+H+DGLK+++TR +NN  ++   +KDKD +LSGEHVREG+T I++VK+  PEFEGQTKT
Sbjct: 395  GTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHVREGMTCIIAVKVPNPEFEGQTKT 454

Query: 902  RLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            RLGNPEVR+IV+Q+V +   +YL+ +P
Sbjct: 455  RLGNPEVRRIVEQSVQENLTEYLELHP 481


>ref|NP_001042691.1| Os01g0268300 [Oryza sativa Japonica Group]
            gi|75285839|sp|Q5NBJ3.1|GYRB_ORYSJ RecName: Full=DNA
            gyrase subunit B, chloroplastic/mitochondrial; Flags:
            Precursor gi|56783730|dbj|BAD81142.1| putative DNA gyrase
            B subunit [Oryza sativa Japonica Group]
            gi|56783751|dbj|BAD81163.1| putative DNA gyrase B subunit
            [Oryza sativa Japonica Group]
            gi|113532222|dbj|BAF04605.1| Os01g0268300 [Oryza sativa
            Japonica Group]
          Length = 729

 Score =  432 bits (1112), Expect = e-119
 Identities = 201/327 (61%), Positives = 266/327 (81%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAG+AT ++++LH D SVS+TDNGRGIPTD+HP TKKS +ETVLT++HAGGKFGG 
Sbjct: 131  VDEAQAGYATKVDVILHGDNSVSVTDNGRGIPTDIHPQTKKSCVETVLTLMHAGGKFGGS 190

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
            +SGY+VSGGLHGVG+SVVNALS+ LEVTVWR+ KE++Q + RG  +T LTS  + ++S  
Sbjct: 191  KSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQNYSRGKAITMLTSRTLSDESSS 250

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQEMEEGKVTSNEYYF 541
             QGTR++F PD  +F TT  FD+NTIA R RE+AFLNP++ I L +E ++ +V  NEY +
Sbjct: 251  RQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNPELTIALTKEEDDLQVQHNEYCY 310

Query: 542  AGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTIDG 721
            AGGL EYV++LN +K  LH P +  KE DG+ V+V+LQWCSDSY++ +LGYANSIRTIDG
Sbjct: 311  AGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSLQWCSDSYSDTVLGYANSIRTIDG 370

Query: 722  GSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTKT 901
            G+H+DGLK+++TR +NN  ++   +KDKD +LSGEHVREG+T I++VK+  PEFEGQTKT
Sbjct: 371  GTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHVREGMTCIIAVKVPNPEFEGQTKT 430

Query: 902  RLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            RLGNPEVR+IV+Q+V +   +YL+ +P
Sbjct: 431  RLGNPEVRRIVEQSVQENLTEYLELHP 457


>ref|XP_006355766.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Solanum tuberosum]
          Length = 729

 Score =  432 bits (1111), Expect = e-118
 Identities = 205/328 (62%), Positives = 265/328 (80%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAG+AT I++ LH+D SV ITDNGRGIPT++HP TKKSSLETVLTVLHAGGKFGG 
Sbjct: 130  VDEAQAGYATKIDVALHADNSVGITDNGRGIPTELHPVTKKSSLETVLTVLHAGGKFGGS 189

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVG+SVVNALS+ LEVT+WR+ KE+KQ + RG PVT L  + +  + + 
Sbjct: 190  SSGYSVSGGLHGVGLSVVNALSEALEVTIWRDGKEYKQKYSRGKPVTTLICQELPMEMKD 249

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQ-EMEEGKVTSNEYY 538
             QGT ++F PD EVF T   FDYNTIA R RE+AFLNP++ I LK+ +++  K+   EY+
Sbjct: 250  RQGTSIQFWPDKEVFTTEIQFDYNTIAGRIRELAFLNPELTIVLKKDDIDPEKIQHAEYF 309

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            +AGGL EYV++LN +K  LH      KE DG+ +++ALQWCSD+Y++ +LGYANSIRTID
Sbjct: 310  YAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMALQWCSDAYSDTMLGYANSIRTID 369

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H+DG+K+A+TR +N++G++   +K+KD NLSGEHVREGLT ++SVK+  PEFEGQTK
Sbjct: 370  GGTHIDGVKAALTRTLNSLGKKSKTIKEKDINLSGEHVREGLTCVISVKVPNPEFEGQTK 429

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVRK+VDQ+V +Y  +YL+ +P
Sbjct: 430  TRLGNPEVRKVVDQSVQEYLTEYLELHP 457


>ref|XP_002873136.1| hypothetical protein ARALYDRAFT_487191 [Arabidopsis lyrata subsp.
            lyrata] gi|297318973|gb|EFH49395.1| hypothetical protein
            ARALYDRAFT_487191 [Arabidopsis lyrata subsp. lyrata]
          Length = 729

 Score =  432 bits (1111), Expect = e-118
 Identities = 210/328 (64%), Positives = 266/328 (81%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            +DEAQAGFA+ +++VLH+DGSVS+ DNGRGIPTD+HPATKKSSLETVLTVLHAGGKFGG 
Sbjct: 130  IDEAQAGFASKVDVVLHADGSVSVVDNGRGIPTDLHPATKKSSLETVLTVLHAGGKFGGT 189

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVG+SVVNALS+ LEVTVWR+  E KQ + RG P+T LT   +  +SE 
Sbjct: 190  SSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEHKQNYSRGKPITTLTCRVLTLESER 249

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQEMEE-GKVTSNEYY 538
             +GT ++F PD EVF T   FD+NTIA R RE+AFLNPKV I+LK+E ++  K   +EYY
Sbjct: 250  TKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAFLNPKVTISLKKEDDDPEKNQYSEYY 309

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            FAGGL+EYV +LN +KN +H      +E +G  V+VALQWCSD+Y++ +LGYANSIRTID
Sbjct: 310  FAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVDVALQWCSDAYSDTMLGYANSIRTID 369

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H++G+K+++TR +N + ++   +K+KD +LSGEHVREGLT IVSVKI  PEFEGQTK
Sbjct: 370  GGTHIEGVKASLTRTLNALAKKSKTVKEKDISLSGEHVREGLTCIVSVKIPNPEFEGQTK 429

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVRKIVDQ+V +Y  ++L+ +P
Sbjct: 430  TRLGNPEVRKIVDQSVQEYLTEFLELHP 457


>ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 719

 Score =  432 bits (1110), Expect = e-118
 Identities = 206/328 (62%), Positives = 265/328 (80%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAGFA+ I++VLH+D SVS+ DNGRGIPTD+HP TKKSSLETVLTVLHAGGKFGG 
Sbjct: 120  VDEAQAGFASQIDVVLHADNSVSVADNGRGIPTDLHPVTKKSSLETVLTVLHAGGKFGGS 179

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVG+SVVNALS+ LEV++WR+  E+ Q + RG P + LTS     + + 
Sbjct: 180  SSGYSVSGGLHGVGLSVVNALSESLEVSIWRDGNEFHQKYSRGKPTSILTSHVPSSELKN 239

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITL-KQEMEEGKVTSNEYY 538
            +QGT ++F PD EVF T   FDYNTI+ R RE+AFLNPK+ I L K++ +  K   NEY 
Sbjct: 240  HQGTHIRFWPDKEVFTTGIQFDYNTISGRIRELAFLNPKLTIALTKEDNDLEKNQYNEYC 299

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            +AGGL EYV +LN +KN +H+ F   KE DGVA++VALQWC+D+Y++ +LGYANSIRTID
Sbjct: 300  YAGGLVEYVAWLNSDKNPIHEVFGFRKETDGVAIDVALQWCADAYSDTILGYANSIRTID 359

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H+DG+K+++TR +NN+G++  I KDKD +LSGEHVREGLT +VSV++  PEFEGQTK
Sbjct: 360  GGTHIDGMKASLTRTLNNLGKKSKIFKDKDISLSGEHVREGLTCVVSVRVRNPEFEGQTK 419

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVRK+V+Q++ +Y  +YL+ +P
Sbjct: 420  TRLGNPEVRKVVEQSIQEYLTEYLELHP 447


>ref|XP_004252016.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Solanum lycopersicum]
          Length = 729

 Score =  431 bits (1109), Expect = e-118
 Identities = 206/328 (62%), Positives = 266/328 (81%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    VDEAQAGFATDINIVLHSDGSVSITDNGRGIPTDMHPATKKSSLETVLTVLHAGGKFGGE 181
            VDEAQAGFAT I++VLH+D SV ITDNGRGIPT++HP TKKSSLETVLTVLHAGGKFGG 
Sbjct: 130  VDEAQAGFATKIDVVLHADNSVGITDNGRGIPTELHPVTKKSSLETVLTVLHAGGKFGGS 189

Query: 182  QSGYSVSGGLHGVGISVVNALSKRLEVTVWRNDKEWKQIFERGVPVTELTSEFIKEDSEL 361
             SGYSVSGGLHGVG+SVVNALS+ LEVT+WR+ KE++Q + RG PVT L  + +  + + 
Sbjct: 190  SSGYSVSGGLHGVGLSVVNALSEALEVTIWRDGKEYQQKYSRGKPVTTLICQELPVEIKD 249

Query: 362  NQGTRVKFLPDDEVFITTTTFDYNTIAERAREVAFLNPKVKITLKQ-EMEEGKVTSNEYY 538
             QGT ++F PD EVF T   FDYNTIA R RE+AFLNP++ I LK+ +++  K+   EY+
Sbjct: 250  WQGTSIRFWPDKEVFTTEIQFDYNTIAGRIRELAFLNPELTIVLKKDDIDPEKIQHAEYF 309

Query: 539  FAGGLSEYVQFLNQNKNQLHQPFSVNKEKDGVAVNVALQWCSDSYAEKLLGYANSIRTID 718
            +AGGL EYV++LN +K  LH      KE DG+ +++ALQWCSD+Y++ +LGYANSIRTID
Sbjct: 310  YAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMALQWCSDAYSDTVLGYANSIRTID 369

Query: 719  GGSHMDGLKSAITRAMNNVGRQLNIMKDKDENLSGEHVREGLTGIVSVKISKPEFEGQTK 898
            GG+H+DG+K+A+TR +N++G++   +K+KD NLSGEHVREGLT ++SVK+  PEFEGQTK
Sbjct: 370  GGTHIDGVKAALTRTLNSLGKKSKTIKEKDINLSGEHVREGLTCVISVKVPNPEFEGQTK 429

Query: 899  TRLGNPEVRKIVDQAVYDYFMDYLQCNP 982
            TRLGNPEVRK+VDQ+V +Y  +YL+ +P
Sbjct: 430  TRLGNPEVRKVVDQSVQEYLTEYLELHP 457