BLASTX nr result
ID: Ephedra28_contig00012733
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00012733
(483 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE75882.1| unknown [Picea sitchensis] 128 9e-28
ref|XP_006843250.1| hypothetical protein AMTR_s00080p00104750 [A... 99 6e-19
ref|XP_002970512.1| hypothetical protein SELMODRAFT_147078 [Sela... 99 6e-19
ref|XP_002978595.1| hypothetical protein SELMODRAFT_152654 [Sela... 99 6e-19
ref|XP_004149538.1| PREDICTED: DDB1- and CUL4-associated factor ... 96 5e-18
ref|XP_006424666.1| hypothetical protein CICLE_v10028345mg [Citr... 94 1e-17
ref|XP_002284848.1| PREDICTED: DDB1- and CUL4-associated factor ... 94 2e-17
gb|EXC33237.1| DDB1- and CUL4-associated factor 8 [Morus notabilis] 94 2e-17
gb|AAO16992.1| Hypothetical protein [Oryza sativa Japonica Group] 93 3e-17
gb|EEE58841.1| hypothetical protein OsJ_10420 [Oryza sativa Japo... 93 3e-17
ref|NP_001049775.1| Os03g0286800 [Oryza sativa Japonica Group] g... 93 3e-17
ref|XP_006366399.1| PREDICTED: DDB1- and CUL4-associated factor ... 92 5e-17
ref|XP_006366123.1| PREDICTED: DDB1- and CUL4-associated factor ... 92 5e-17
ref|XP_004251276.1| PREDICTED: DDB1- and CUL4-associated factor ... 92 5e-17
ref|XP_004984829.1| PREDICTED: DDB1- and CUL4-associated factor ... 92 7e-17
ref|XP_002532257.1| WD-repeat protein, putative [Ricinus communi... 92 7e-17
gb|ABI34308.1| WD domain containing protein, putative [Solanum d... 92 9e-17
ref|XP_006651270.1| PREDICTED: DDB1- and CUL4-associated factor ... 91 1e-16
ref|XP_001761389.1| predicted protein [Physcomitrella patens] gi... 91 2e-16
gb|ESW22231.1| hypothetical protein PHAVU_005G137900g [Phaseolus... 91 2e-16
>gb|ADE75882.1| unknown [Picea sitchensis]
Length = 201
Score = 128 bits (321), Expect = 9e-28
Identities = 63/113 (55%), Positives = 79/113 (69%), Gaps = 3/113 (2%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LV +MKGDK++VNCLEPHPYATILATSGIEKNIK+W+PTA + +PD+ EELM+ NKRK
Sbjct: 65 LVHLMKGDKEVVNCLEPHPYATILATSGIEKNIKVWSPTASHLIPLPDNVEELMEANKRK 124
Query: 301 REHQAHTSFPPEMIMHLLRLQXXXXXXXXXXXRLDVDFE---EDDSILTSYSM 152
RE A SF P++IMH+LRLQ DFE ++D + Y+M
Sbjct: 125 REQHARISFTPDVIMHVLRLQRRVSKRDGDRRISREDFEGEDDEDDDMDGYAM 177
>ref|XP_006843250.1| hypothetical protein AMTR_s00080p00104750 [Amborella trichopoda]
gi|548845534|gb|ERN04925.1| hypothetical protein
AMTR_s00080p00104750 [Amborella trichopoda]
Length = 472
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/81 (53%), Positives = 63/81 (77%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
L+ +M GDK +VNCLEPHP TILATSG+EKN+K+W P A + +PD+AE++M+ N++
Sbjct: 340 LLWLMVGDKHVVNCLEPHPCVTILATSGLEKNVKLWAPIAEAPIPLPDNAEQIMEANRQG 399
Query: 301 REHQAHTSFPPEMIMHLLRLQ 239
RE ++ + P++IMH+LRLQ
Sbjct: 400 REDRSRITVTPDVIMHVLRLQ 420
>ref|XP_002970512.1| hypothetical protein SELMODRAFT_147078 [Selaginella moellendorffii]
gi|300162028|gb|EFJ28642.1| hypothetical protein
SELMODRAFT_147078 [Selaginella moellendorffii]
Length = 481
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/81 (53%), Positives = 61/81 (75%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LV M+KGD+++VNCLEPHP+ LATSG++K IK+W PT+ DR P +A+++M+ NKR
Sbjct: 350 LVTMLKGDRRVVNCLEPHPHTAFLATSGMDKTIKLWAPTSVDREPFPPNADKIMERNKRS 409
Query: 301 REHQAHTSFPPEMIMHLLRLQ 239
RE ++ F PE+IM +L LQ
Sbjct: 410 REDLSNVPFTPEIIMRVLHLQ 430
>ref|XP_002978595.1| hypothetical protein SELMODRAFT_152654 [Selaginella moellendorffii]
gi|300153944|gb|EFJ20581.1| hypothetical protein
SELMODRAFT_152654 [Selaginella moellendorffii]
Length = 481
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/81 (53%), Positives = 61/81 (75%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LV M+KGD+++VNCLEPHP+ LATSG++K IK+W PT+ DR P +A+++M+ NKR
Sbjct: 350 LVTMLKGDRRVVNCLEPHPHTAFLATSGMDKTIKLWAPTSVDREPFPPNADKIMERNKRS 409
Query: 301 REHQAHTSFPPEMIMHLLRLQ 239
RE ++ F PE+IM +L LQ
Sbjct: 410 REDLSNVPFTPEIIMRVLHLQ 430
>ref|XP_004149538.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Cucumis
sativus] gi|449532795|ref|XP_004173364.1| PREDICTED:
DDB1- and CUL4-associated factor 8-like [Cucumis
sativus]
Length = 480
Score = 95.9 bits (237), Expect = 5e-18
Identities = 42/81 (51%), Positives = 60/81 (74%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LV++M GD +VN +EPHP+ ILAT GIE N+KIWTP A D +PDD E++M++NK+
Sbjct: 347 LVKLMLGDHDVVNHIEPHPHLPILATCGIENNVKIWTPMASDVPPLPDDMEQIMESNKQG 406
Query: 301 REHQAHTSFPPEMIMHLLRLQ 239
RE + + P++I+H+LRLQ
Sbjct: 407 REEHSRVTLTPDVIVHVLRLQ 427
>ref|XP_006424666.1| hypothetical protein CICLE_v10028345mg [Citrus clementina]
gi|568869980|ref|XP_006488192.1| PREDICTED: DDB1- and
CUL4-associated factor 8-like [Citrus sinensis]
gi|557526600|gb|ESR37906.1| hypothetical protein
CICLE_v10028345mg [Citrus clementina]
Length = 477
Score = 94.4 bits (233), Expect = 1e-17
Identities = 45/102 (44%), Positives = 63/102 (61%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LVR+M GD+ +VN LEPHP+ + AT GIEK +K+W P D +PD+AE++MK NK+
Sbjct: 347 LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQG 406
Query: 301 REHQAHTSFPPEMIMHLLRLQXXXXXXXXXXXRLDVDFEEDD 176
RE + + P++IMH+LRLQ DFE D+
Sbjct: 407 REDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAADFESDE 448
>ref|XP_002284848.1| PREDICTED: DDB1- and CUL4-associated factor 8 [Vitis vinifera]
gi|297746195|emb|CBI16251.3| unnamed protein product
[Vitis vinifera]
Length = 479
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/102 (45%), Positives = 64/102 (62%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LVR+ GD+QIVN LEPHPY I A+ GIE +IK+W P A L +PDDAE++M++N++
Sbjct: 346 LVRLTAGDQQIVNHLEPHPYMPIFASCGIENSIKLWIPMADGSLPLPDDAEKIMESNRQG 405
Query: 301 REHQAHTSFPPEMIMHLLRLQXXXXXXXXXXXRLDVDFEEDD 176
RE + + P++IMH+LRLQ D E D+
Sbjct: 406 REDHSLITLTPDVIMHVLRLQRRQNAAYIERRYDRADIENDE 447
>gb|EXC33237.1| DDB1- and CUL4-associated factor 8 [Morus notabilis]
Length = 475
Score = 93.6 bits (231), Expect = 2e-17
Identities = 45/102 (44%), Positives = 62/102 (60%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
L+R+M GD+++VN LEPHP+ I AT GIE ++KIW PT D +P + E++M++NKR
Sbjct: 342 LIRLMIGDRRVVNQLEPHPHMPIFATCGIESSVKIWAPTPTDAPPLPTNVEKVMESNKRG 401
Query: 301 REHQAHTSFPPEMIMHLLRLQXXXXXXXXXXXRLDVDFEEDD 176
RE QA P++IMH+LRLQ D E D
Sbjct: 402 REDQARVILTPDVIMHVLRLQRRQAMAFVERRYSRADIESSD 443
>gb|AAO16992.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 600
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
L+RMM GDK +VNC+EPHP+ LATSGI+K +KIWTP+A +++P +A++++ +NKR
Sbjct: 324 LLRMMHGDKSVVNCIEPHPHFPFLATSGIDKTVKIWTPSANKVMSLPKNAKQIIASNKRA 383
Query: 301 REHQA---HTSFPPEMIMHLLRLQXXXXXXXXXXXRLDVDFEEDD 176
RE A + ++IMH+LRLQ D DD
Sbjct: 384 REIDASRPELTLSSDLIMHVLRLQRRQSELYREHEPATADLASDD 428
>gb|EEE58841.1| hypothetical protein OsJ_10420 [Oryza sativa Japonica Group]
Length = 530
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
L+RMM GDK +VNC+EPHP+ LATSGI+K +KIWTP+A +++P +A++++ +NKR
Sbjct: 346 LLRMMHGDKSVVNCIEPHPHFPFLATSGIDKTVKIWTPSANKVMSLPKNAKQIIASNKRA 405
Query: 301 REHQA---HTSFPPEMIMHLLRLQXXXXXXXXXXXRLDVDFEEDD 176
RE A + ++IMH+LRLQ D DD
Sbjct: 406 REIDASRPELTLSSDLIMHVLRLQRRQSELYREHEPATADLASDD 450
>ref|NP_001049775.1| Os03g0286800 [Oryza sativa Japonica Group]
gi|108707567|gb|ABF95362.1| WD domain containing
protein, putative, expressed [Oryza sativa Japonica
Group] gi|113548246|dbj|BAF11689.1| Os03g0286800 [Oryza
sativa Japonica Group] gi|215767148|dbj|BAG99376.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 477
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
L+RMM GDK +VNC+EPHP+ LATSGI+K +KIWTP+A +++P +A++++ +NKR
Sbjct: 346 LLRMMHGDKSVVNCIEPHPHFPFLATSGIDKTVKIWTPSANKVMSLPKNAKQIIASNKRA 405
Query: 301 REHQA---HTSFPPEMIMHLLRLQXXXXXXXXXXXRLDVDFEEDD 176
RE A + ++IMH+LRLQ D DD
Sbjct: 406 REIDASRPELTLSSDLIMHVLRLQRRQSELYREHEPATADLASDD 450
>ref|XP_006366399.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X1
[Solanum tuberosum] gi|565401839|ref|XP_006366400.1|
PREDICTED: DDB1- and CUL4-associated factor 8-like
isoform X2 [Solanum tuberosum]
Length = 472
Score = 92.4 bits (228), Expect = 5e-17
Identities = 47/104 (45%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LVR+M GD+ IVN L+PHP +LAT GIEK IK+W PT+ D +P D +E+M+ N+R
Sbjct: 343 LVRVMVGDRHIVNQLKPHPCIPVLATCGIEKTIKLWAPTSKDVTPLPPDVQEIMEANRRG 402
Query: 301 REHQAHTSFPPEMIMHLLRL--QXXXXXXXXXXXRLDVDFEEDD 176
RE + + P+MIMH+LRL + DVD ++DD
Sbjct: 403 REDHSRVTLTPDMIMHVLRLHRRQALAYIERRENLGDVDSDDDD 446
>ref|XP_006366123.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Solanum
tuberosum]
Length = 473
Score = 92.4 bits (228), Expect = 5e-17
Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LVR+M GD+ IVN L PHPY +LAT GIEK IK+WTP++ + +P DA+++M+ NKR
Sbjct: 347 LVRLMVGDRHIVNQLAPHPYIPVLATCGIEKTIKLWTPSSKNVTPLPRDAQKIMEANKRG 406
Query: 301 REHQAHTSFPPEMIMHLLRLQXXXXXXXXXXXRL--DVDFEEDD 176
RE + + P++IMH+LR+ D++ +EDD
Sbjct: 407 REDHSRATLTPDVIMHVLRMHRRQALAYVERRHTRGDIESDEDD 450
>ref|XP_004251276.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Solanum
lycopersicum]
Length = 472
Score = 92.4 bits (228), Expect = 5e-17
Identities = 47/104 (45%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LVR+M GD+ IVN L+PHP +LAT GIEK IK+W PT+ D +P D +E+M+ N+R
Sbjct: 343 LVRVMVGDRHIVNQLKPHPCIPVLATCGIEKTIKLWAPTSKDVTPLPPDVQEIMEANRRG 402
Query: 301 REHQAHTSFPPEMIMHLLRL--QXXXXXXXXXXXRLDVDFEEDD 176
RE + + P+MIMH+LRL + DVD ++DD
Sbjct: 403 REDHSRVTLTPDMIMHVLRLHRRQALAYIERRENLGDVDSDDDD 446
>ref|XP_004984829.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Setaria
italica]
Length = 520
Score = 92.0 bits (227), Expect = 7e-17
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
L+RMM GDK +VNC+EPHP+ +ATSGI+K +K+WTPTA +++P +A+E++ +N+R
Sbjct: 389 LMRMMNGDKSVVNCIEPHPHFPFMATSGIDKTVKLWTPTAKKVMSLPKNAKEIIASNERG 448
Query: 301 RE---HQAHTSFPPEMIMHLLRLQXXXXXXXXXXXRLDVDFEEDD 176
RE +A + ++IMH+LRL DF DD
Sbjct: 449 REVDASRAEVTLSSDVIMHVLRLHRRQSELHRENEPAAGDFASDD 493
>ref|XP_002532257.1| WD-repeat protein, putative [Ricinus communis]
gi|223528045|gb|EEF30123.1| WD-repeat protein, putative
[Ricinus communis]
Length = 479
Score = 92.0 bits (227), Expect = 7e-17
Identities = 38/81 (46%), Positives = 61/81 (75%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LVR+M GD+Q+VN +PHP+ + AT GIEK++K+W P A + ++PD+ E++M++N++
Sbjct: 347 LVRLMFGDRQVVNQFDPHPHMPMFATCGIEKSVKLWIPMASEDSSIPDNVEKIMESNRQG 406
Query: 301 REHQAHTSFPPEMIMHLLRLQ 239
RE + S P++IMH+LRLQ
Sbjct: 407 REDHSQVSLTPDVIMHVLRLQ 427
>gb|ABI34308.1| WD domain containing protein, putative [Solanum demissum]
Length = 454
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/80 (52%), Positives = 57/80 (71%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LVR+M GD+ IVN L+PHP +LAT GIEK IK+W PT+ D +P D +E+M+ N+R
Sbjct: 325 LVRVMVGDRHIVNQLKPHPCIPVLATCGIEKTIKLWAPTSKDVTPLPPDVQEIMEANRRG 384
Query: 301 REHQAHTSFPPEMIMHLLRL 242
RE + + P+MIMH+LRL
Sbjct: 385 REDHSRVTLTPDMIMHVLRL 404
>ref|XP_006651270.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Oryza
brachyantha]
Length = 480
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
L+RMM GDK +VNC+EPHP+ LATSGI+K +KIWTP A ++P +A++++ +N+R
Sbjct: 349 LLRMMHGDKSVVNCIEPHPHFPFLATSGIDKTVKIWTPAANKVTSLPKNAKQIIASNERG 408
Query: 301 REHQA---HTSFPPEMIMHLLRLQXXXXXXXXXXXRLDVDFEEDD 176
R+ A + ++IMH+LRLQ D D DD
Sbjct: 409 RQIDASRPELTLSSDLIMHVLRLQRRRSDLYREHEPADADLPSDD 453
>ref|XP_001761389.1| predicted protein [Physcomitrella patens]
gi|162687395|gb|EDQ73778.1| predicted protein
[Physcomitrella patens]
Length = 495
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/121 (42%), Positives = 67/121 (55%), Gaps = 18/121 (14%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LV +MKGD +VNCLEPHPYATILATSGIE IKIW+P + L +P D + +M+ NKR+
Sbjct: 360 LVALMKGDDTVVNCLEPHPYATILATSGIEDTIKIWSPESERILDLPHDTDRIMRINKRR 419
Query: 301 REHQAHT-SFPPEMIMHLL-----------------RLQXXXXXXXXXXXRLDVDFEEDD 176
RE QA+ P ++ LL ++ +D DF+EDD
Sbjct: 420 RESQANNIQLTPGLVRRLLLSRHLHMPNYNEGGTNTQVSFEGGYADDDGGVVDSDFDEDD 479
Query: 175 S 173
S
Sbjct: 480 S 480
>gb|ESW22231.1| hypothetical protein PHAVU_005G137900g [Phaseolus vulgaris]
Length = 484
Score = 90.5 bits (223), Expect = 2e-16
Identities = 40/81 (49%), Positives = 59/81 (72%)
Frame = -3
Query: 481 LVRMMKGDKQIVNCLEPHPYATILATSGIEKNIKIWTPTAGDRLAVPDDAEELMKNNKRK 302
LVR+M GD+ +VN LE HP+ ILAT G+EKN+KIWTP D +P + +E+M+ N++
Sbjct: 352 LVRLMVGDQHVVNQLEAHPHIPILATCGLEKNVKIWTPQGNDIPPLPGNVKEIMEGNRQG 411
Query: 301 REHQAHTSFPPEMIMHLLRLQ 239
RE ++ + P++IMH+LRLQ
Sbjct: 412 REDRSRVTLTPDVIMHVLRLQ 432