BLASTX nr result
ID: Ephedra28_contig00012731
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00012731
(1438 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005850343.1| hypothetical protein CHLNCDRAFT_142152 [Chlo... 103 1e-19
ref|XP_004335370.1| ribosomal RNA large subunit methyltransferas... 92 7e-16
gb|ETV81563.1| hypothetical protein H257_06048 [Aphanomyces astaci] 86 5e-14
ref|YP_003616564.1| THUMP domain protein [methanocaldococcus inf... 85 9e-14
ref|XP_002781579.1| hypothetical protein Pmar_PMAR009324 [Perkin... 82 7e-13
ref|XP_002773145.1| hypothetical protein Pmar_PMAR026973 [Perkin... 80 3e-12
gb|ETV92634.1| hypothetical protein H310_13083 [Aphanomyces inva... 77 2e-11
emb|CCA16368.1| Predicted 23S rRNA methylase containing THUMP do... 77 2e-11
ref|YP_003127374.1| THUMP domain-containing protein [Methanocald... 77 2e-11
ref|YP_003247150.1| THUMP domain-containing protein [Methanocald... 74 2e-10
gb|EQC41091.1| hypothetical protein, variant [Saprolegnia diclin... 74 2e-10
gb|EQC41090.1| hypothetical protein SDRG_02141 [Saprolegnia dicl... 74 2e-10
ref|WP_007044810.1| hypothetical protein [Methanotorris formicic... 73 3e-10
ref|YP_003458099.1| THUMP domain protein [Methanocaldococcus sp.... 71 1e-09
ref|NP_248253.1| hypothetical protein MJ_1257 [Methanocaldococcu... 70 2e-09
ref|YP_004485091.1| THUMP domain-containing protein [Methanotorr... 70 2e-09
ref|XP_002508711.1| predicted protein [Micromonas sp. RCC299] gi... 70 2e-09
ref|WP_017981104.1| hypothetical protein [Methanocaldococcus vil... 69 4e-09
ref|WP_004594248.1| THUMP domain-containing protein [Methanocald... 69 4e-09
ref|XP_004995147.1| hypothetical protein PTSG_04250 [Salpingoeca... 69 6e-09
>ref|XP_005850343.1| hypothetical protein CHLNCDRAFT_142152 [Chlorella variabilis]
gi|307110004|gb|EFN58241.1| hypothetical protein
CHLNCDRAFT_142152 [Chlorella variabilis]
Length = 486
Score = 103 bits (258), Expect = 1e-19
Identities = 87/352 (24%), Positives = 160/352 (45%), Gaps = 7/352 (1%)
Frame = +2
Query: 71 FCDRAEELGKVESEYNGPCLVLLHNCSLTAQQLLPHIRS-TFLRGYIMRVYWCQN---IA 238
F + E+G ++ +GPCLV LT +L I S + ++RVY+ Q+ +A
Sbjct: 128 FAEEVHEVGPC-TDRDGPCLVHYKRTRLTPAELNAWIYSNSSANAAVVRVYFLQSSPGVA 186
Query: 239 STKAHMVAHIRSLLKSLTPNTNKLSRFDAEDKASMQDEFGRLVDLDHVSDNYSRKSFRFR 418
++ +V + + + +L F + + D+ +L V + R
Sbjct: 187 LSRQQLVEQLVAAGPAPDGGRLRLQCFPRSLEGWLGDQLPPSFNLQPVDPAWVLHIVRMP 246
Query: 419 IQTHPRELADDLVHELGDFDCVLHDFTHSIYVVEADGNFLYGLDEGSNMY-LAPSNRVSL 595
+ + + + G + + FL+ L ++Y P +
Sbjct: 247 AEEQQQA---EPAKQQGQ--------------QQQEERFLWSLQRADHLYNYQPVRDKRV 289
Query: 596 SKGVSKASTKIEEALCVANFDLHKDMLVLDVGAAPGAWTEYVSHNVKAVLAIDPGRLCDQ 775
+ KA+ K+ EAL A L + V D+GAAPG WT ++ + VLA+DP + ++
Sbjct: 290 PDQLCKAAGKLSEALTAAGLQLTSGVAV-DLGAAPGGWTHVLAQRARLVLAVDPAPMDER 348
Query: 776 AQQKNVI-HICKKAEEAHAELESWTTQKLADLLVYDINKHPIEAVKIILSLIKYLKPGGR 952
A V+ H+ KAE A ++ + DL+V D+N+HP + V ++ L+ L PG
Sbjct: 349 ALVPGVVTHLACKAEAAVQQIVGMVGEAGVDLIVSDVNRHPSQIVDMLRPLLPLLHPGAA 408
Query: 953 LVLTLKFHGRGKVK-ESKLKEVYGLFHGILRNTECIWLMANSIYERTFMGIK 1105
+++TLKF GRG+ + E +++ + +WL+AN+ +E+T + K
Sbjct: 409 VIMTLKFFGRGQGRTEEWRQKLAEQLAPEFERVQLLWLLANTQHEQTAIAFK 460
>ref|XP_004335370.1| ribosomal RNA large subunit methyltransferase J, putative
[Acanthamoeba castellanii str. Neff]
gi|440792129|gb|ELR13357.1| ribosomal RNA large subunit
methyltransferase J, putative [Acanthamoeba castellanii
str. Neff]
Length = 424
Score = 91.7 bits (226), Expect = 7e-16
Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 19/266 (7%)
Frame = +2
Query: 368 DLDHVSDNY-----SRKSFRFRIQTHPRELADDLVHELGDFDCVLH--DFTHSIYVVEAD 526
DLD + D + K+ R+ P+ + +V+ L + LH FTH + +
Sbjct: 166 DLDFLQDIAHDAIRTNKARVLRLCVFPKSRTEAVVNAL-PAEVQLHPKQFTHVLSIARER 224
Query: 527 GNFLYGLDEGSNMYLAPSN---RVSLSKGVSKASTKIEEAL----CVANFDLHKDMLVLD 685
G + YGL ++ P + V + K VS+A K++E C+ D + +D
Sbjct: 225 GRYYYGLAP-KELFWGPESGVHSVQMDK-VSRAYHKMKEVFTRIDCLRLADTAQ-WTAID 281
Query: 686 VGAAPGAWTEYVSHNVKAVLAIDPGRLCDQAQQKNVIHICKKAEEAHAELESWTTQKLAD 865
VGAAPG WT+Y+S +K V++IDPG L + NV+H+ KK E+ EL + D
Sbjct: 282 VGAAPGGWTQYLSPLMKQVISIDPGELRIEL-PPNVVHLKKKVEDCMEELRK---EAPVD 337
Query: 866 LLVYDINK-HPIEAVKIILSLIKYLKPGGRLVLTLKFHGRG----KVKESKLKEVYGLFH 1030
+L D+N ++A++++L L L+ GG +V+T K R +VK L+ +
Sbjct: 338 MLACDMNMCEALQAIEVMLPLAPLLRKGGYIVMTWKLPKRMDVNLEVKTEALRVNFAEQF 397
Query: 1031 GILRNTECIWLMANSIYERTFMGIKL 1108
+ IWL+AN +YERT + K+
Sbjct: 398 AGFEIVQVIWLLAN-MYERTVVARKI 422
>gb|ETV81563.1| hypothetical protein H257_06048 [Aphanomyces astaci]
Length = 361
Score = 85.5 bits (210), Expect = 5e-14
Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 36/269 (13%)
Frame = +2
Query: 398 RKSFRFRIQTHPRELADDLVHELGDFDCVLH--DFTHSIYVVE---ADGNFLYGLD---- 550
++S FR+ +P L + LV L D+ H +H ++VV A +F YG+
Sbjct: 100 QRSSVFRVVAYPSHLQNKLVQLLHDYGYATHPRQHSHELHVVSSALAGPSFYYGVSAAGT 159
Query: 551 ----EGSNMYLAPSNRVSLSKGVS---------KASTKIEEALCVANFDLHKD---MLVL 682
+ + PS+ +++S VS +A K++EA + L L
Sbjct: 160 KSTRDPTTAMERPSSCMAISPEVSPSLHSQVPCRAYFKLQEACRGGSVSLLPPRGYFRAL 219
Query: 683 DVGAAPGAWTEYVSHN-VKAVLAIDPGRLCDQAQQKNVIHICKKAEEAHAELESWTTQKL 859
D+GA+PG WTE++S + V+A+DPG L ++IH+ E AH L T
Sbjct: 220 DIGASPGGWTEFLSSSGASCVVAVDPGMLTIPVDGVSIIHLNMLVEAAHPIL---ATMDK 276
Query: 860 ADLLVYDINKHPIEAVKIILSLIKYLKPGGRLVLTLKFHGRGKVK----------ESKLK 1009
+ V DIN P K+I S++ +L P +++LTLK GR + +++L
Sbjct: 277 FHVCVCDINVRPRSMAKLIRSVMAFLHPHAKVILTLKL-GRRPTEAAVQLAVQDVQTELG 335
Query: 1010 EVYGLFHGILRNTECIWLMANSIYERTFM 1096
+ +G + + WL AN+I ERT +
Sbjct: 336 QAFGAY-------DVRWLHANTINERTLV 357
>ref|YP_003616564.1| THUMP domain protein [methanocaldococcus infernus ME]
gi|502865370|ref|WP_013100346.1| hypothetical protein
[Methanocaldococcus infernus] gi|295434429|gb|ADG13600.1|
THUMP domain protein [Methanocaldococcus infernus ME]
Length = 326
Score = 84.7 bits (208), Expect = 9e-14
Identities = 58/168 (34%), Positives = 97/168 (57%), Gaps = 4/168 (2%)
Frame = +2
Query: 605 VSKASTKIEEALCVANFD-LHKDM-LVLDVGAAPGAWTEYVSHNVKAVLAIDPGRLCDQA 778
+S+A KI E + F + KD+ +VLD+G+APG W + +S K V A+DP L +
Sbjct: 167 ISRAENKIREL--IDKFPHIFKDLNVVLDIGSAPGGWVKVLSEVSKKVYAVDPAEL--KV 222
Query: 779 QQKNVIHICKKAEEAHAELESWTTQKLADLLVYDINKHPIEAVKIILSLIKYLKPGGRLV 958
+++N++HI K+AEE E + DL+ D N +P+E+ +I +K LK G ++
Sbjct: 223 KRENIVHIKKRAEEVEIE-------ETLDLITNDTNLYPLESFSLIERFLKNLKNNGYII 275
Query: 959 LTLKFHGRGKVKESKLKEVYGLFHGI--LRNTECIWLMANSIYERTFM 1096
TLK RGKVK++ L+EV + ++ + + L +N+ +ERT +
Sbjct: 276 YTLKGE-RGKVKDN-LREVLSYIDKLENIKLEKVVKLKSNTRWERTLI 321
>ref|XP_002781579.1| hypothetical protein Pmar_PMAR009324 [Perkinsus marinus ATCC 50983]
gi|239892429|gb|EER13374.1| hypothetical protein
Pmar_PMAR009324 [Perkinsus marinus ATCC 50983]
Length = 301
Score = 81.6 bits (200), Expect = 7e-13
Identities = 66/237 (27%), Positives = 110/237 (46%), Gaps = 9/237 (3%)
Frame = +2
Query: 416 RIQTHPRELADDLVHELGDFDCVLHDFTHSIYVVEADGNFLYGLDEGSNMY---LAPSNR 586
R+QT P + L + C D+TH VV DG +L G+ + Y + ++
Sbjct: 58 RLQTFPSRYQKTIADYLPEGMCHPRDYTHVAQVVYIDGLYLLGICQPEECYIGNIVETSN 117
Query: 587 VSLSKGVSKASTKIEEALCVANFDL---HKDMLVLDVGAAPGAWTEYV-SHNVKAVLAID 754
L+ V KA K+ EA F+ +M +DVGA+PG W+ Y+ + V ++A+D
Sbjct: 118 GRLTDSVCKAEYKLAEAFRRFGFEFGEKRDEMTAIDVGASPGGWSRYLYNEGVGRIIAVD 177
Query: 755 PGRLCDQAQQKNVIHICKKAEEAHAE-LESWTTQKLADLLVYDINKHPIEAVKIILSLIK 931
G + + H +EA + LE ++ D+ V D N P E++ ++ +
Sbjct: 178 KGEVDCSKSDGKIEHWDMLGQEAIQKLLEHEGHRESLDVYVCDANLPPPESLAMLRQASE 237
Query: 932 YLKPGGRLVLTLKFHGRGKVKESKLKEV-YGLFHGILRNTECIWLMANSIYERTFMG 1099
+KPG +V+T K + K K KE+ + F I + + L+AN+ E T G
Sbjct: 238 LIKPGAYVVVTFKNPYKRKADWYKAKELSFDDFSTICDHPTEVHLLANTPNETTVGG 294
>ref|XP_002773145.1| hypothetical protein Pmar_PMAR026973 [Perkinsus marinus ATCC 50983]
gi|239878106|gb|EER04961.1| hypothetical protein
Pmar_PMAR026973 [Perkinsus marinus ATCC 50983]
Length = 473
Score = 79.7 bits (195), Expect = 3e-12
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 9/237 (3%)
Frame = +2
Query: 416 RIQTHPRELADDLVHELGDFDCVLHDFTHSIYVVEADGNFLYGLDEGSNMY---LAPSNR 586
R+QT P + L + C D+TH VV DG +L G+ + Y + ++
Sbjct: 230 RLQTFPSRYQKIIADYLPEGMCHPRDYTHVAQVVYIDGLYLLGICQPEECYIGNIVETSN 289
Query: 587 VSLSKGVSKASTKIEEALCVANFDL---HKDMLVLDVGAAPGAWTEYV-SHNVKAVLAID 754
L+ V KA K+ EA ++ +M +DVGA+PG W+ Y+ + V ++A+D
Sbjct: 290 GRLTDSVCKAEYKLAEAFRRFGYEFGEKRDEMTAIDVGASPGGWSRYLYNEGVGRIIAVD 349
Query: 755 PGRLCDQAQQKNVIHICKKAEEAHAE-LESWTTQKLADLLVYDINKHPIEAVKIILSLIK 931
G + + H +EA + LE ++ D+ V D N P E++ ++ +
Sbjct: 350 KGEVDCSKSDGKIEHWDMLGQEAIQKLLEHEGHRESLDVYVCDANLPPPESLAMLRQASE 409
Query: 932 YLKPGGRLVLTLKFHGRGKVKESKLKEV-YGLFHGILRNTECIWLMANSIYERTFMG 1099
+KPG +V+T K + K K KE+ + F I + + L+AN+ E T G
Sbjct: 410 LIKPGAYVVVTFKNPYKRKADWYKAKELSFDDFSTICDHPTEVHLLANTPNETTVGG 466
>gb|ETV92634.1| hypothetical protein H310_13083 [Aphanomyces invadans]
Length = 345
Score = 77.0 bits (188), Expect = 2e-11
Identities = 73/250 (29%), Positives = 112/250 (44%), Gaps = 22/250 (8%)
Frame = +2
Query: 413 FRIQTHPRELADDLVHELGDFDCVLHD--FTHSIYVVEADGNFLYGLDEGSNMYLAPSNR 586
FR+ +P L LV L + H TH ++VV A Y Y
Sbjct: 103 FRVVAYPNHLQTKLVDLLHEHGYATHPTKHTHELHVVAAPRAAPY-------FYFGVLAV 155
Query: 587 VSLSKGV-SKASTKIEEAL-CVANFDLHK--------------DMLVLDVGAAPGAWTEY 718
VS + S+A + + EA+ C A F L + +D+GA+PG WT +
Sbjct: 156 VSKAPPTPSEAGSTVVEAIPCRAYFKLQEACRGGSMQLLPPQDGFRAIDIGASPGGWTSF 215
Query: 719 VSHN-VKAVLAIDPGRLCDQAQQKNVIHICKKAEEAHAELESWTTQKLADLLVYDINKHP 895
+S N V+A+DPG L ++IH+ E A +L +L DL V DIN P
Sbjct: 216 LSRNGASCVVAVDPGMLTIPVDGVSIIHLNMLVEAALPQLSE---MELFDLCVCDINVRP 272
Query: 896 IEAVKIILSLIKYLKPGGRLVLTLKFHGRGKVKESKLKEVYGLFHGILRN---TECIWLM 1066
K+I S++ +L +++LTLK GR + + + V + + R+ + WL
Sbjct: 273 RSMAKLIRSVLPFLTARAKVILTLKL-GRRPTETAVQQAVCDVQVELGRSFGAYDVRWLH 331
Query: 1067 ANSIYERTFM 1096
AN+I ERT +
Sbjct: 332 ANTINERTLV 341
>emb|CCA16368.1| Predicted 23S rRNA methylase containing THUMP domain (ISS) putative
[Albugo laibachii Nc14]
Length = 389
Score = 77.0 bits (188), Expect = 2e-11
Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Frame = +2
Query: 503 SIYVVEADGNFLYGLDEGSNMYL-APSNRVSLSKGVS-KASTKIEEALCVANFDLHKDML 676
+++ VE +G+ E S + L +P + + K V +A K++E L + + ++ D
Sbjct: 133 AVFQVENANYIYFGIREMSLVPLPSPLSSTPIQKIVPCRAYYKLQECLDIVH--VNADDR 190
Query: 677 VLDVGAAPGAWTEYVSHNVKAVLAIDPGRLCDQAQQKNVIHICKKAEEAHAELESWTTQK 856
VLD+GAAPG WT + V A+DPG L Q Q + H+ E+A +L QK
Sbjct: 191 VLDIGAAPGGWTRCLYERGACVTAVDPGELNIQVQPPRIQHLQMLLEDALPQLSK--MQK 248
Query: 857 LADLLVYDINKHPIEAVKIILSLIKYLKPGGRLVLTLKFHGRGKVKESKLKEVYGLFHGI 1036
D+ V DIN ++ ++L + L P LVLTLK G+ K E+ ++E + I
Sbjct: 249 F-DVCVCDINVRVHQSASLMLKVASLLAPSAFLVLTLKL-GK-KPNENAVQEAISIAERI 305
Query: 1037 LRN----TECIWLMANSIYERT 1090
L E WL AN+ ERT
Sbjct: 306 LSEHYHAFETKWLQANTRNERT 327
>ref|YP_003127374.1| THUMP domain-containing protein [Methanocaldococcus fervens AG86]
gi|502459515|ref|WP_012794896.1| hypothetical protein
[Methanocaldococcus fervens] gi|256793205|gb|ACV23874.1|
THUMP domain protein [Methanocaldococcus fervens AG86]
Length = 349
Score = 76.6 bits (187), Expect = 2e-11
Identities = 45/135 (33%), Positives = 73/135 (54%)
Frame = +2
Query: 593 LSKGVSKASTKIEEALCVANFDLHKDMLVLDVGAAPGAWTEYVSHNVKAVLAIDPGRLCD 772
+ + ++++ K++E + F V+D+G+APG W + +S K V AID G L
Sbjct: 182 VERPLNRSERKMQELMEKFPFIFENLNCVVDIGSAPGGWAKMLSKKAKKVYAIDTGEL-- 239
Query: 773 QAQQKNVIHICKKAEEAHAELESWTTQKLADLLVYDINKHPIEAVKIILSLIKYLKPGGR 952
+ + KN+IHI K+AE+ E + + DL+ D N +P E++ + L KYLK GG
Sbjct: 240 KVKAKNIIHIKKRAEDVDFEKD---IDEEIDLITNDTNLYPDESIFLTLKFAKYLKSGGY 296
Query: 953 LVLTLKFHGRGKVKE 997
++ TLK KE
Sbjct: 297 IIHTLKARNLETKKE 311
>ref|YP_003247150.1| THUMP domain-containing protein [Methanocaldococcus vulcanius M7]
gi|506213113|ref|WP_015732888.1| hypothetical protein
[Methanocaldococcus vulcanius]
gi|261369919|gb|ACX72668.1| THUMP domain protein
[Methanocaldococcus vulcanius M7]
Length = 349
Score = 73.9 bits (180), Expect = 2e-10
Identities = 42/113 (37%), Positives = 66/113 (58%)
Frame = +2
Query: 677 VLDVGAAPGAWTEYVSHNVKAVLAIDPGRLCDQAQQKNVIHICKKAEEAHAELESWTTQK 856
V+D+GA+PG W + +S K V AID G L + + N+IHI K+AE + + + +
Sbjct: 210 VVDIGASPGGWAKLLSKLAKKVYAIDTGEL--KVKNDNIIHIKKRAESVNFKED---INE 264
Query: 857 LADLLVYDINKHPIEAVKIILSLIKYLKPGGRLVLTLKFHGRGKVKESKLKEV 1015
DL+ D N +PIE++ + L + YLK GG ++ T+K K K+S L E+
Sbjct: 265 DIDLITNDTNLYPIESILLTLRFVNYLKSGGYIIHTVKAEDYSK-KKSSLSEI 316
>gb|EQC41091.1| hypothetical protein, variant [Saprolegnia diclina VS20]
Length = 316
Score = 73.6 bits (179), Expect = 2e-10
Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 5/242 (2%)
Frame = +2
Query: 395 SRKSFRFRIQTHPRELADDLVHELGDFDCVLHD--FTHSIYVVEADGNFLYGLDEGSNMY 568
S +S FR+ +P L LV L + +TH ++ V F +G+ +
Sbjct: 85 STRSETFRVIAYPSSLQTGLVALLAEHGIATDPKRYTHELHAVHDATVFRFGVVPRRVVA 144
Query: 569 LAPSNRVSLSKGVS-KASTKIEEALCVANFDLHKDMLVLDVGAAPGAWTEYVSHNVKAVL 745
AP L+ V +A K+ EAL + +D+GA+PG WTE++S V+
Sbjct: 145 EAP-----LADDVPCRAYHKLAEAL-LDQTPFPTGYRAIDIGASPGGWTEFLSSAGATVV 198
Query: 746 AIDPGRLCDQAQQKNVIHICKKAEEAHAELESWTTQKLADLLVYDINKHPIEAVKIILSL 925
A+DPG L NV+H+ E A L+ + + V DIN P +I S+
Sbjct: 199 AVDPGELI--VTHPNVLHVPLLLEHA---LDQISAMDKFHVCVCDINIRPQLMASLIASV 253
Query: 926 IKYLKPGGRLVLTLKFHGR--GKVKESKLKEVYGLFHGILRNTECIWLMANSIYERTFMG 1099
+L P +VLTLK R + +++V + + WL AN+I ERT
Sbjct: 254 APHLHPHAIVVLTLKLSKRPTDAAVDQAIRDVCHVLGDEFEHFRIEWLHANTINERTLFA 313
Query: 1100 IK 1105
K
Sbjct: 314 RK 315
>gb|EQC41090.1| hypothetical protein SDRG_02141 [Saprolegnia diclina VS20]
Length = 334
Score = 73.6 bits (179), Expect = 2e-10
Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 5/241 (2%)
Frame = +2
Query: 395 SRKSFRFRIQTHPRELADDLVHELGDFDCVLHD--FTHSIYVVEADGNFLYGLDEGSNMY 568
S +S FR+ +P L LV L + +TH ++ V F +G+ +
Sbjct: 85 STRSETFRVIAYPSSLQTGLVALLAEHGIATDPKRYTHELHAVHDATVFRFGVVPRRVVA 144
Query: 569 LAPSNRVSLSKGVS-KASTKIEEALCVANFDLHKDMLVLDVGAAPGAWTEYVSHNVKAVL 745
AP L+ V +A K+ EAL + +D+GA+PG WTE++S V+
Sbjct: 145 EAP-----LADDVPCRAYHKLAEAL-LDQTPFPTGYRAIDIGASPGGWTEFLSSAGATVV 198
Query: 746 AIDPGRLCDQAQQKNVIHICKKAEEAHAELESWTTQKLADLLVYDINKHPIEAVKIILSL 925
A+DPG L NV+H+ E A L+ + + V DIN P +I S+
Sbjct: 199 AVDPGELI--VTHPNVLHVPLLLEHA---LDQISAMDKFHVCVCDINIRPQLMASLIASV 253
Query: 926 IKYLKPGGRLVLTLKFHGR--GKVKESKLKEVYGLFHGILRNTECIWLMANSIYERTFMG 1099
+L P +VLTLK R + +++V + + WL AN+I ERT
Sbjct: 254 APHLHPHAIVVLTLKLSKRPTDAAVDQAIRDVCHVLGDEFEHFRIEWLHANTINERTLFA 313
Query: 1100 I 1102
+
Sbjct: 314 L 314
>ref|WP_007044810.1| hypothetical protein [Methanotorris formicicus]
gi|373558990|gb|EHP85305.1| THUMP domain-containing
protein [Methanotorris formicicus Mc-S-70]
Length = 339
Score = 72.8 bits (177), Expect = 3e-10
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 5/214 (2%)
Frame = +2
Query: 470 DFDCVLHDFTHSIYVVEADGNFLYGLDEGS---NMYLAPSNRVSLSKGVSKASTKIEEAL 640
DF + + Y+ D NF EG+ + YL L++ K +E
Sbjct: 137 DFKINIEIIQDTAYISIFDDNFNEFRHEGNIKKSKYLKRYIERPLNRSERKMKELVERYP 196
Query: 641 CVANFDLHKDMLVLDVGAAPGAWTEYVSHNVKAVLAIDPGRLCDQAQQKNVIHICKKAEE 820
+ + D+ +D+G+APG W + ++ N K V AID G L + ++ N+IHI K+AE+
Sbjct: 197 NIFDVDI-----AVDIGSAPGGWAKVLAENAKVVYAIDTGNL--RIKKDNIIHIKKRAED 249
Query: 821 AHAELESWTTQKLADLLVYDINKHPIEAVKIILSLIKYLKPGGRLVLTLKFHGRGKVKE- 997
LL D N +P E+ + + L K+L G ++ T+K + +KE
Sbjct: 250 I-------DNLPQCQLLTNDTNLYPEESALLTVKLSKFLVKNGYIIHTIKSENKYAIKED 302
Query: 998 -SKLKEVYGLFHGILRNTECIWLMANSIYERTFM 1096
SK+K+++ + ++ + + L AN+I E T M
Sbjct: 303 ISKVKKIFE--NANIKILKIMNLKANTINEVTLM 334
>ref|YP_003458099.1| THUMP domain protein [Methanocaldococcus sp. FS406-22]
gi|502745289|ref|WP_012980273.1| hypothetical protein
[Methanocaldococcus sp. FS406-22]
gi|288938608|gb|ADC69363.1| THUMP domain protein
[Methanocaldococcus sp. FS406-22]
Length = 349
Score = 71.2 bits (173), Expect = 1e-09
Identities = 44/141 (31%), Positives = 78/141 (55%)
Frame = +2
Query: 593 LSKGVSKASTKIEEALCVANFDLHKDMLVLDVGAAPGAWTEYVSHNVKAVLAIDPGRLCD 772
+ + ++++ K++E + F V+D+G++PG W + +S K V AID G L
Sbjct: 182 VERPLNRSERKMDELIKKFPFIFENLNCVVDIGSSPGGWAKMLSKKAKKVYAIDTGEL-- 239
Query: 773 QAQQKNVIHICKKAEEAHAELESWTTQKLADLLVYDINKHPIEAVKIILSLIKYLKPGGR 952
+ + N+IHI K+AE + + E +++ DL+ D N +P E++ + L KYLK G
Sbjct: 240 KIKANNIIHIKKRAE--YVDFEKDIGEEI-DLITNDTNLYPDESIFLTLKFAKYLKSNGY 296
Query: 953 LVLTLKFHGRGKVKESKLKEV 1015
++ TLK K K+ L++V
Sbjct: 297 IIHTLKARNL-KTKKEDLEQV 316
>ref|NP_248253.1| hypothetical protein MJ_1257 [Methanocaldococcus jannaschii DSM 2661]
gi|499173183|ref|WP_010870770.1| hypothetical protein
[Methanocaldococcus jannaschii]
gi|37999507|sp|Q58654.1|Y1257_METJA RecName:
Full=Uncharacterized protein MJ1257
gi|1591891|gb|AAB99268.1| hypothetical protein MJ_1257
[Methanocaldococcus jannaschii DSM 2661]
Length = 349
Score = 70.5 bits (171), Expect = 2e-09
Identities = 49/170 (28%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Frame = +2
Query: 593 LSKGVSKASTKIEEALCVANFDLHKDMLVLDVGAAPGAWTEYVSHNVKAVLAIDPGRLCD 772
+ + ++++ K++E + F V+D+G++PG W + +S K V AID G L
Sbjct: 182 IERPLNRSERKMQELMEKFPFIFENINCVVDIGSSPGGWAKMLSKKAKKVYAIDTGEL-- 239
Query: 773 QAQQKNVIHICKKAEEAHAELESWTTQKLADLLVYDINKHPIEAVKIILSLIKYLKPGGR 952
+ + N+IHI K+AE E + + DL+ D N +P E++ + L K+LK G
Sbjct: 240 KIKANNIIHIKKRAENVDFEKD---INEEIDLITNDTNLYPDESLFLTLKFAKHLKTNGY 296
Query: 953 LVLTLKFHGRGKVKESKLKEVYGL--FHGILRNTECIWLMANSIYERTFM 1096
++ TLK K K+ L++V + ++ ++ + I L AN+ E T +
Sbjct: 297 IIHTLKARNL-KTKKEDLEKVLKILSYYRNIKIFKIINLRANTKNELTLI 345
>ref|YP_004485091.1| THUMP domain-containing protein [Methanotorris igneus Kol 5]
gi|503565545|ref|WP_013799621.1| hypothetical protein
[Methanotorris igneus] gi|333751947|gb|AEF97026.1| THUMP
domain-containing protein [Methanotorris igneus Kol 5]
Length = 344
Score = 70.1 bits (170), Expect = 2e-09
Identities = 45/143 (31%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Frame = +2
Query: 674 LVLDVGAAPGAWTEYVSHNVKAVLAIDPGRLCDQAQQKNVIHICKKAEEAHAELESWTTQ 853
+V+D+G+APG W + ++ N K V AID G L + ++ N+IHI K+AE+
Sbjct: 208 VVIDIGSAPGGWAKVLAENAKVVYAIDTGEL--KIKKDNIIHIKKRAEDVE-------DL 258
Query: 854 KLADLLVYDINKHPIEAVKIILSLIKYLKPGGRLVLTLKFHGRGKVKE--SKLKEVYGLF 1027
LL D N +P E+ + + L K+L+ G ++ T+K + VKE K+K+++
Sbjct: 259 PQCQLLTNDTNLYPEESALLTVKLSKFLEENGYIIHTIKSENKYNVKEDIDKVKKIFE-- 316
Query: 1028 HGILRNTECIWLMANSIYERTFM 1096
+ ++ + + L AN+ E T M
Sbjct: 317 NANIKILKIMNLRANTKNEVTLM 339
>ref|XP_002508711.1| predicted protein [Micromonas sp. RCC299]
gi|226523988|gb|ACO69969.1| predicted protein
[Micromonas sp. RCC299]
Length = 602
Score = 70.1 bits (170), Expect = 2e-09
Identities = 73/253 (28%), Positives = 112/253 (44%), Gaps = 31/253 (12%)
Frame = +2
Query: 320 DAEDKASMQDEFGRLVDLDHVSDNYSRKSFRFRIQTHPRELADDLVHEL----------G 469
DA D A+++++ LVD + S + R R++ P L D ++ L G
Sbjct: 221 DALD-ATLREKLASLVDAALGGEKDSSFAARIRVRCFPPRLRDVVLEALEARPVLGGSHG 279
Query: 470 DFDCV-LHDFTHSIYVVEADGNF---LYGLDEGSNMYL---------APSNRVSLSKGVS 610
C + D TH++ VV G ++ LD L A R + + +
Sbjct: 280 WETCARVDDATHALDVVAVRGRAHVTVWSLDRTGPDSLRAWLMDAGEAARKRRTDAGAMC 339
Query: 611 KASTKIEEALCVANFDLHKDMLVLDVGAAPGAWTEYVSHNVKA-----VLAIDPGRLCDQ 775
+A KIEEA A + + +DVGAAPG WT+++ + A V A+DP L D
Sbjct: 340 RAFHKIEEATARAGVAIERTWRCVDVGAAPGGWTQWLCARLDAACGGEVFAVDPAELGDF 399
Query: 776 AQQK---NVIHICKKAEEAHAELESWTTQKLADLLVYDINKHPIEAVKIILSLIKYLKPG 946
+ NV H+ + E+A +E+ DLLV D N P A I+ + + L+ G
Sbjct: 400 KNGRLPPNVTHLKMRGEDA---VETVRRAGDVDLLVCDANVSPETATGIVSAFVPALRRG 456
Query: 947 GRLVLTLKFHGRG 985
LVLT K +G
Sbjct: 457 ATLVLTFKDATKG 469
>ref|WP_017981104.1| hypothetical protein [Methanocaldococcus villosus]
Length = 318
Score = 69.3 bits (168), Expect = 4e-09
Identities = 50/167 (29%), Positives = 81/167 (48%)
Frame = +2
Query: 470 DFDCVLHDFTHSIYVVEADGNFLYGLDEGSNMYLAPSNRVSLSKGVSKASTKIEEALCVA 649
DF + +YV D NF + + + L NR + ++++ K+ E +
Sbjct: 119 DFKINIEILQDKVYVSIFDKNFKEIVFKKNIEKLEKINRYK-ERPLNRSERKMSELMEKF 177
Query: 650 NFDLHKDMLVLDVGAAPGAWTEYVSHNVKAVLAIDPGRLCDQAQQKNVIHICKKAEEAHA 829
F VLD+G+APG W + +S K V AID L + + N+IHI +KAE +
Sbjct: 178 PFIFENLNTVLDIGSAPGGWVKVLSKRAKKVYAIDRADL--KVKADNIIHIKEKAENVNI 235
Query: 830 ELESWTTQKLADLLVYDINKHPIEAVKIILSLIKYLKPGGRLVLTLK 970
+ E DL+ D N +P E++ + L +K LK GG ++ T+K
Sbjct: 236 DEE-------VDLITNDTNLYPKESMILTLKFLKNLKSGGYIIQTVK 275
>ref|WP_004594248.1| THUMP domain-containing protein [Methanocaldococcus villosus]
gi|478431249|gb|ENN95620.1| THUMP domain-containing
protein [Methanocaldococcus villosus KIN24-T80]
Length = 317
Score = 69.3 bits (168), Expect = 4e-09
Identities = 50/167 (29%), Positives = 81/167 (48%)
Frame = +2
Query: 470 DFDCVLHDFTHSIYVVEADGNFLYGLDEGSNMYLAPSNRVSLSKGVSKASTKIEEALCVA 649
DF + +YV D NF + + + L NR + ++++ K+ E +
Sbjct: 118 DFKINIEILQDKVYVSIFDKNFKEIVFKKNIEKLEKINRYK-ERPLNRSERKMSELMEKF 176
Query: 650 NFDLHKDMLVLDVGAAPGAWTEYVSHNVKAVLAIDPGRLCDQAQQKNVIHICKKAEEAHA 829
F VLD+G+APG W + +S K V AID L + + N+IHI +KAE +
Sbjct: 177 PFIFENLNTVLDIGSAPGGWVKVLSKRAKKVYAIDRADL--KVKADNIIHIKEKAENVNI 234
Query: 830 ELESWTTQKLADLLVYDINKHPIEAVKIILSLIKYLKPGGRLVLTLK 970
+ E DL+ D N +P E++ + L +K LK GG ++ T+K
Sbjct: 235 DEE-------VDLITNDTNLYPKESMILTLKFLKNLKSGGYIIQTVK 274
>ref|XP_004995147.1| hypothetical protein PTSG_04250 [Salpingoeca rosetta]
gi|326438073|gb|EGD83643.1| hypothetical protein
PTSG_04250 [Salpingoeca rosetta]
Length = 571
Score = 68.6 bits (166), Expect = 6e-09
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Frame = +2
Query: 605 VSKASTKIEEALCVANFDLHKDMLVLDVGAAPGAWTEYVSHNVKAVLAIDPGR------- 763
+S+A K+ E L +F L +DM +DVGAAPG W++ ++ VLA+DPG
Sbjct: 359 ISRAYFKLNEVLLRRSFTLTRDMTAIDVGAAPGGWSQCMAKQAGLVLAVDPGAIEVPHIP 418
Query: 764 ----LCDQAQQKNVIHICKKAEEAHAELESWTTQKLADLLVYDINKHPIEAVKIILSLIK 931
+ ++ +IHI K+ +++HA LE + + D+N + ++ +
Sbjct: 419 YTPGMKRPSEPGTIIHIQKRMQDSHAILEEFGP---LHMYTCDMNVEFGVVLDLLAEVFP 475
Query: 932 YLKPGGRLVLTLKFHGRGKVKESKLKEVYGLFHGI-LRNTECIWLMANSIYERTFMGIKL 1108
+L G V+T+K + + +++ + + + + L AN E T +G+KL
Sbjct: 476 HLAVGALTVVTVKLFRKARHSLVAIRDAQTKIRQLGFGHVQVLHLFANKKQEFTVIGVKL 535
Query: 1109 E 1111
+
Sbjct: 536 D 536