BLASTX nr result

ID: Ephedra28_contig00012691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012691
         (804 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22069.1| unknown [Picea sitchensis] gi|116785114|gb|ABK236...   215   1e-53
gb|AFK46555.1| unknown [Lotus japonicus]                              207   5e-51
gb|ESW03389.1| hypothetical protein PHAVU_011G010100g [Phaseolus...   204   2e-50
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su...   204   4e-50
ref|XP_004251169.1| PREDICTED: DNA-directed RNA polymerase II su...   203   5e-50
ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, ...   202   1e-49
ref|XP_002973726.1| hypothetical protein SELMODRAFT_173532 [Sela...   202   1e-49
ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycin...   202   1e-49
ref|XP_004489205.1| PREDICTED: DNA-directed RNA polymerase II su...   200   4e-49
gb|EMJ02624.1| hypothetical protein PRUPE_ppa013559mg [Prunus pe...   199   9e-49
ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II su...   199   9e-49
gb|ACJ83854.1| unknown [Medicago truncatula] gi|388519401|gb|AFK...   199   1e-48
ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa poly...   197   3e-48
ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II su...   197   4e-48
ref|XP_001753081.1| predicted protein [Physcomitrella patens] gi...   196   6e-48
ref|XP_006292069.1| hypothetical protein CARUB_v10018264mg [Caps...   196   8e-48
gb|EOX96660.1| DNA-directed RNA polymerase II subunit RPB11 [The...   195   1e-47
ref|XP_003578343.1| PREDICTED: DNA-directed RNA polymerase II su...   194   2e-47
ref|XP_002877842.1| ATRPB13.6 [Arabidopsis lyrata subsp. lyrata]...   194   2e-47
ref|XP_002447457.1| hypothetical protein SORBIDRAFT_06g001360 [S...   194   2e-47

>gb|ABK22069.1| unknown [Picea sitchensis] gi|116785114|gb|ABK23600.1| unknown
           [Picea sitchensis] gi|116790373|gb|ABK25590.1| unknown
           [Picea sitchensis] gi|224284720|gb|ACN40091.1| unknown
           [Picea sitchensis]
          Length = 120

 Score =  215 bits (548), Expect = 1e-53
 Identities = 105/120 (87%), Positives = 114/120 (95%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYEKFVVPEGTKKV+YERD+KIMNAATFVIEREDHTIGNI+RMQLHRDPNVLFAG
Sbjct: 1   MNAPDRYEKFVVPEGTKKVSYERDMKIMNAATFVIEREDHTIGNIVRMQLHRDPNVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY*EAL 293
           YKLPHPLQYKILLRIQT+SQSSPMQAYNLAI+DLDKELDHLK +FE+E+ R QS+  E L
Sbjct: 61  YKLPHPLQYKILLRIQTTSQSSPMQAYNLAIDDLDKELDHLKRSFEDEMVRLQSENREGL 120


>gb|AFK46555.1| unknown [Lotus japonicus]
          Length = 116

 Score =  207 bits (526), Expect = 5e-51
 Identities = 98/116 (84%), Positives = 108/116 (93%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+YERD KI+NAA+F IEREDHTIGNILRMQLHRDPNVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPNVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           YKLPHPLQYKI++RI T+SQSSPMQAYN +INDLDKELDHLKNAFE ++ RF  DY
Sbjct: 61  YKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELDHLKNAFEADMLRFSRDY 116


>gb|ESW03389.1| hypothetical protein PHAVU_011G010100g [Phaseolus vulgaris]
          Length = 116

 Score =  204 bits (520), Expect = 2e-50
 Identities = 96/116 (82%), Positives = 108/116 (93%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+YERD KI+NAA+F IERE+HTIGNILRMQLHRDPNVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           YKLPHPLQYKI++RI T+SQSSPMQAYN +INDLD+ELDHLKNAFE E+ +F  DY
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDRELDHLKNAFEAEMLKFSRDY 116


>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Cucumis sativus] gi|449516703|ref|XP_004165386.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB11-like [Cucumis sativus]
          Length = 116

 Score =  204 bits (518), Expect = 4e-50
 Identities = 97/116 (83%), Positives = 107/116 (92%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+YERD KI+NAA+F IERE+HTIGNILRMQLHRD NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           YKLPHPLQYKI++RI T+SQSSPMQAYN AINDLDKELDHLKNAFE E ++F  DY
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAKFSRDY 116


>ref|XP_004251169.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Solanum lycopersicum] gi|565346226|ref|XP_006340167.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 11-like [Solanum tuberosum]
          Length = 116

 Score =  203 bits (517), Expect = 5e-50
 Identities = 97/116 (83%), Positives = 106/116 (91%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEG KKV+YERD KIMNAATF +EREDHTIGNI+RMQLHRD NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGVKKVSYERDTKIMNAATFTVEREDHTIGNIVRMQLHRDDNVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           YKLPHPLQYKILLRIQT+SQSSPMQAYN AINDLDKELDHLK+ FE E+++   DY
Sbjct: 61  YKLPHPLQYKILLRIQTTSQSSPMQAYNQAINDLDKELDHLKSQFEGELAKHTRDY 116


>ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11
           [Glycine max]
          Length = 116

 Score =  202 bits (514), Expect = 1e-49
 Identities = 95/116 (81%), Positives = 108/116 (93%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+YERD KI+NAA+F IERE+HTIGNILRMQLHRDPNVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           YKLPHPLQYKI++RI T+SQSSPMQAYN +INDLD+ELDHLK+AFE E+ +F  DY
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKSAFEAEMLKFSRDY 116


>ref|XP_002973726.1| hypothetical protein SELMODRAFT_173532 [Selaginella moellendorffii]
           gi|302788013|ref|XP_002975776.1| hypothetical protein
           SELMODRAFT_150734 [Selaginella moellendorffii]
           gi|300156777|gb|EFJ23405.1| hypothetical protein
           SELMODRAFT_150734 [Selaginella moellendorffii]
           gi|300158764|gb|EFJ25386.1| hypothetical protein
           SELMODRAFT_173532 [Selaginella moellendorffii]
          Length = 117

 Score =  202 bits (513), Expect = 1e-49
 Identities = 90/116 (77%), Positives = 110/116 (94%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV YERD+K+MNA  F I+REDHT+GN++RMQLHRDPNVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVAYERDMKVMNAGAFTIQREDHTVGNVVRMQLHRDPNVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           YKLPHPLQYKI++++QT+SQSSP+QAYNLA++DLDKEL+HLK AFE+EV++ Q+DY
Sbjct: 61  YKLPHPLQYKIIVKVQTTSQSSPIQAYNLALSDLDKELEHLKRAFESEVAQRQTDY 116


>ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycine max]
           gi|255626235|gb|ACU13462.1| unknown [Glycine max]
          Length = 116

 Score =  202 bits (513), Expect = 1e-49
 Identities = 94/116 (81%), Positives = 108/116 (93%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+YERD KI+NAA+F IERE+HTIGNILRMQLHRDPNVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           YKLPHPLQYKI++RI T+SQSSPMQAYN ++NDLD+ELDHLK+AFE E+ +F  DY
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFEAEMLKFSRDY 116


>ref|XP_004489205.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like [Cicer
           arietinum] gi|502152948|ref|XP_004509165.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB11-like
           isoform X1 [Cicer arietinum]
           gi|502152950|ref|XP_004509166.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB11-like isoform X2 [Cicer
           arietinum]
          Length = 116

 Score =  200 bits (509), Expect = 4e-49
 Identities = 95/116 (81%), Positives = 105/116 (90%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+YERD KI+NAA+F IEREDHTI NILRMQLHRDPNVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIANILRMQLHRDPNVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           YKLPHPLQYKI++RI T+SQSSPMQAYN +INDLDKELD LKN FE E+ +F  DY
Sbjct: 61  YKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELDQLKNGFEAELLKFSKDY 116


>gb|EMJ02624.1| hypothetical protein PRUPE_ppa013559mg [Prunus persica]
          Length = 116

 Score =  199 bits (506), Expect = 9e-49
 Identities = 95/116 (81%), Positives = 106/116 (91%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+YERD KI+NAA+F IEREDHTIGNILRMQLHRD NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDENVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           YKLPHPLQYKI++RI T+SQSSPMQAYN AINDLDKELDHLK+ FE EV++   +Y
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSCFEAEVAKHSVEY 116


>ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Vitis
           vinifera] gi|296082163|emb|CBI21168.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score =  199 bits (506), Expect = 9e-49
 Identities = 94/116 (81%), Positives = 107/116 (92%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+YERD KI+NAA+F +EREDHTIGNILRMQLHRD NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           YKLPHPLQYKI++RI T+SQSSPMQAYN AINDLDKELD+LKNAFE E+++   +Y
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFEVELAKHSREY 116


>gb|ACJ83854.1| unknown [Medicago truncatula] gi|388519401|gb|AFK47762.1| unknown
           [Medicago truncatula]
          Length = 116

 Score =  199 bits (505), Expect = 1e-48
 Identities = 94/116 (81%), Positives = 105/116 (90%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV YERD KI+NAA+F IEREDHTIGNILRMQLH+DPNVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVAYERDTKIINAASFTIEREDHTIGNILRMQLHKDPNVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           YKLPHPLQYKI++RI T+SQSSPMQAYN +INDLDKELD LK+ FE E+ +F  DY
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEAELLKFSKDY 116


>ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa polypeptide family protein
           [Populus trichocarpa] gi|566186802|ref|XP_006379118.1|
           hypothetical protein POPTR_0009s07520g [Populus
           trichocarpa] gi|118484276|gb|ABK94017.1| unknown
           [Populus trichocarpa] gi|222849662|gb|EEE87209.1|
           DNA-directed RNA polymerase II 13.6 kDa polypeptide
           family protein [Populus trichocarpa]
           gi|550331237|gb|ERP56915.1| hypothetical protein
           POPTR_0009s07520g [Populus trichocarpa]
          Length = 116

 Score =  197 bits (502), Expect = 3e-48
 Identities = 94/116 (81%), Positives = 105/116 (90%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+YERD KI+NAA+F +EREDHTIGNILRMQLHRD NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDDNVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           YKLPHPL+YKI++RI T+SQSSPMQAYN AINDLDKELDHLKNAFE E++     Y
Sbjct: 61  YKLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAELANRPGQY 116


>ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           isoform 2 [Fragaria vesca subsp. vesca]
          Length = 118

 Score =  197 bits (501), Expect = 4e-48
 Identities = 97/118 (82%), Positives = 107/118 (90%), Gaps = 2/118 (1%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+YERD KI+NAA+F IEREDHTIGNILRMQLHRD NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDENVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSR--FQSDY 305
           YKLPHPLQYKI++RI T+SQSSPMQAYN AINDLDKELDHLK+ FE EV++   Q DY
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSNFEAEVAKHSMQVDY 118


>ref|XP_001753081.1| predicted protein [Physcomitrella patens]
           gi|162695780|gb|EDQ82122.1| predicted protein
           [Physcomitrella patens]
          Length = 117

 Score =  196 bits (499), Expect = 6e-48
 Identities = 89/116 (76%), Positives = 107/116 (92%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEG KKV YERD+K+MNAATF +EREDHT+GN++RMQLHRDP+VLFAG
Sbjct: 1   MNAPDRYERFVVPEGMKKVAYERDMKVMNAATFTVEREDHTVGNVIRMQLHRDPSVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           Y+LPHPLQY+++++IQT+SQSSPMQAYNLAI DL KELDHLK  FE+E S+ Q+DY
Sbjct: 61  YRLPHPLQYRLVVKIQTTSQSSPMQAYNLAITDLIKELDHLKAVFEHETSQKQADY 116


>ref|XP_006292069.1| hypothetical protein CARUB_v10018264mg [Capsella rubella]
           gi|482560776|gb|EOA24967.1| hypothetical protein
           CARUB_v10018264mg [Capsella rubella]
          Length = 116

 Score =  196 bits (498), Expect = 8e-48
 Identities = 92/116 (79%), Positives = 107/116 (92%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+Y+RD KI+NAA+F IEREDHTIGNI+RMQLHRD NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYDRDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           Y+LPHPL+YKI++RI T+SQSSPMQAYN AINDLDKELD+LKN FE EV++F + Y
Sbjct: 61  YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFSNQY 116


>gb|EOX96660.1| DNA-directed RNA polymerase II subunit RPB11 [Theobroma cacao]
          Length = 169

 Score =  195 bits (496), Expect = 1e-47
 Identities = 93/106 (87%), Positives = 101/106 (95%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+YERD KI+NAA+F IEREDHTIGNI+RMQLHRD NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFE 335
           YKLPHPLQYKI++RI T+SQSSPMQAYN AINDLDKELDHLKNAFE
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE 106


>ref|XP_003578343.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           isoform 1 [Brachypodium distachyon]
           gi|357159117|ref|XP_003578344.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB11-like isoform 2
           [Brachypodium distachyon]
          Length = 119

 Score =  194 bits (494), Expect = 2e-47
 Identities = 92/113 (81%), Positives = 105/113 (92%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV++E+D KIMNAA+F IEREDHTIGNILRMQLHRDPNVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSFEKDTKIMNAASFTIEREDHTIGNILRMQLHRDPNVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQ 314
           YKLPHPLQYKI++RI T+SQSSP QAYN AINDLD EL++LK AFE+E +RF+
Sbjct: 61  YKLPHPLQYKIIVRIHTASQSSPTQAYNQAINDLDSELENLKQAFEDEKNRFE 113


>ref|XP_002877842.1| ATRPB13.6 [Arabidopsis lyrata subsp. lyrata]
           gi|297323680|gb|EFH54101.1| ATRPB13.6 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 116

 Score =  194 bits (494), Expect = 2e-47
 Identities = 91/116 (78%), Positives = 107/116 (92%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+Y+RD KI+NAA+F IEREDHTIGNI+RMQLHRD NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYDRDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQSDY 305
           Y+LPHPL+YKI++RI T+SQSSPMQAYN AINDLDKELD+LKN FE EV++F + +
Sbjct: 61  YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFSNQF 116


>ref|XP_002447457.1| hypothetical protein SORBIDRAFT_06g001360 [Sorghum bicolor]
           gi|241938640|gb|EES11785.1| hypothetical protein
           SORBIDRAFT_06g001360 [Sorghum bicolor]
          Length = 117

 Score =  194 bits (494), Expect = 2e-47
 Identities = 91/113 (80%), Positives = 106/113 (93%)
 Frame = -3

Query: 652 MNAPDRYEKFVVPEGTKKVTYERDLKIMNAATFVIEREDHTIGNILRMQLHRDPNVLFAG 473
           MNAPDRYE+FVVPEGTKKV+YERD KI+NAA+F IEREDHTIGNI+RMQLHRDPNVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG 60

Query: 472 YKLPHPLQYKILLRIQTSSQSSPMQAYNLAINDLDKELDHLKNAFENEVSRFQ 314
           YKLPHPLQYKI++RI T+SQSSP QAY+ A+NDLDKEL++LK AFE+E +RF+
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPTQAYSQAVNDLDKELEYLKQAFEDEKNRFE 113


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