BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012688
         (1842 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containi...   327   1e-86
ref|XP_006484205.1| PREDICTED: pentatricopeptide repeat-containi...   327   1e-86
ref|XP_006837135.1| hypothetical protein AMTR_s00110p00138300 [A...   318   5e-84
ref|XP_006354656.1| PREDICTED: pentatricopeptide repeat-containi...   317   1e-83
gb|EMJ26324.1| hypothetical protein PRUPE_ppa002589mg [Prunus pe...   313   2e-82
ref|XP_004297237.1| PREDICTED: pentatricopeptide repeat-containi...   311   6e-82
ref|XP_004229722.1| PREDICTED: pentatricopeptide repeat-containi...   310   2e-81
tpg|DAA57305.1| TPA: hypothetical protein ZEAMMB73_061992 [Zea m...   310   2e-81
gb|EOY01697.1| Pentatricopeptide repeat (PPR) superfamily protei...   309   2e-81
ref|XP_002458620.1| hypothetical protein SORBIDRAFT_03g036830 [S...   309   3e-81
emb|CBI27289.3| unnamed protein product [Vitis vinifera]              306   3e-80
gb|EXB44841.1| hypothetical protein L484_026421 [Morus notabilis...   305   3e-80
ref|XP_006644828.1| PREDICTED: pentatricopeptide repeat-containi...   305   4e-80
ref|XP_006301643.1| hypothetical protein CARUB_v10022087mg [Caps...   305   4e-80
ref|XP_002512079.1| pentatricopeptide repeat-containing protein,...   304   7e-80
gb|AAG52501.1|AC018364_19 unknown protein; 45065-49536 [Arabidop...   301   8e-79
ref|NP_177089.2| pentatricopeptide repeat-containing protein [Ar...   301   8e-79
ref|XP_003614163.1| Pentatricopeptide repeat-containing protein ...   300   1e-78
ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containi...   300   2e-78
ref|XP_002888712.1| hypothetical protein ARALYDRAFT_339164 [Arab...   300   2e-78

>ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
            [Vitis vinifera]
          Length = 655

 Score =  327 bits (838), Expect = 1e-86
 Identities = 189/566 (33%), Positives = 322/566 (56%), Gaps = 9/566 (1%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLSESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXX 1663
            K L N L+  + S   L++LKRAFA  + +LEK P  +LL+F T+  +L ++        
Sbjct: 96   KSLANSLIAHLASLHDLYNLKRAFASAVFLLEKNP--SLLDFGTVRTLLGSMNSANTAAP 153

Query: 1662 XXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSECEHARR 1483
                      N    P SMWG ++ +I     +    + +  E CR  ++   E      
Sbjct: 154  AFALINCMFKNRYFMPFSMWGGVIVEITRRNRSFVAFLRVFNETCRIAIDEKLESMKPDL 213

Query: 1482 VAFNSFLCACL-NLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLED 1306
             A N  L  C  +L+ VS+AE++++    LGI P+  SFG LA LYA  GL + +  LE 
Sbjct: 214  DACNVALEGCSQDLESVSEAEKVVEMMSVLGIQPDESSFGFLAYLYALKGLEEKIVELEG 273

Query: 1305 IMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISK-VYDKFV 1129
            +MR +G   ++  Y+ L+  Y+  G+LE  S+ +   +R +   D +    S+  Y + V
Sbjct: 274  LMRGFGFSSKKVIYSYLINAYVKSGNLEYVSRTIFRSLRED---DEQGPNFSEETYCEVV 330

Query: 1128 REFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILDKLYAK 970
            + FL     +DL   +I+ Q  E ++++V       +  A + LG L+KAH+ILD++  +
Sbjct: 331  KGFLQNGSIKDLASLIIETQKLEPSSIAVDRSIGYGIISACVSLGFLDKAHSILDEMNVQ 390

Query: 969  NLKAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESA 790
             +  G+G + S+L+++CKE++T +A++++ ++       D  +YD +I+A +S++D++SA
Sbjct: 391  GVSVGLGVYVSILKAFCKEHRTAEAAQLVTEISSLGLQLDAGSYDALIEASMSSQDFQSA 450

Query: 789  ISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIH 610
             S FR M+E  + ++  SY+T+MTGLTE  +P+LMAA L E   D R++VGT+DWNS+IH
Sbjct: 451  FSLFRDMREARVPDMKGSYLTMMTGLTENHRPELMAAFLDEIVEDPRVEVGTHDWNSIIH 510

Query: 609  SFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKA 430
            +FC++G L DAR+TF+ M+  +FE N+ TYL L+N Y + + Y  +  L   +++ I   
Sbjct: 511  AFCKVGRLEDARRTFRRMIFLQFEPNDQTYLSLINGYASAEKYFSVLMLWNEVKRRISID 570

Query: 429  LKCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQNS 250
               G++    +  L+D  L+AL+ GG     +QV++ +Q + I ++KWR +Q F+E    
Sbjct: 571  ---GEKGVKFDHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKIFVDKWRYKQAFMEVHKK 627

Query: 249  LEYSYFKKKNTVRWKVLMAFKRSVGL 172
            L+ +  +K+N  + + L+AFK   GL
Sbjct: 628  LKVAKVRKRNFRKMEALIAFKNWAGL 653


>ref|XP_006484205.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like
            [Citrus sinensis]
          Length = 666

 Score =  327 bits (837), Expect = 1e-86
 Identities = 190/566 (33%), Positives = 307/566 (54%), Gaps = 9/566 (1%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLSESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXX 1663
            K + N L+  + S    H+LKRAFA V+ ++EK P   LL+F T+  +L ++        
Sbjct: 107  KPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNP--KLLDFQTVHTLLGSMRNANTAAP 164

Query: 1662 XXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSECEHARR 1483
                      N    P  +WG  L  I  + S     +++  E CR  ++   +      
Sbjct: 165  AFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDEKLDFMKPNI 224

Query: 1482 VAFNSFL-CACLNLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLED 1306
             A N+ L   C  L  VS AE++IQ    LG+ PN  SFG LA LYA  GL + +  LE 
Sbjct: 225  YACNAALEGCCYGLQSVSDAEKVIQTMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 284

Query: 1305 IMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISK-VYDKFV 1129
            +M  +G   +  +Y+ L+ GY+  G+LESAS+ +L  +      + E    SK  Y + V
Sbjct: 285  LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG---GNMEQSDFSKETYCEVV 341

Query: 1128 REFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILDKLYAK 970
            + FL     + L   +I+AQ  E + + V       +  A + LG  +KAH+ILD++ A 
Sbjct: 342  KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 401

Query: 969  NLKAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESA 790
                G+G +   L++YCKE++T +A++++ D+       D  NYD +I+A I+++D++SA
Sbjct: 402  GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 461

Query: 789  ISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIH 610
             S FR M+E  I ++  SY+TIMTGL E  +P+LMAA L E   D R++V T+DWNS+IH
Sbjct: 462  FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 521

Query: 609  SFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKA 430
            +FC+ G L DA++T + M+  +FE N+ TYL L+N Y   + Y  +  +   +++ I   
Sbjct: 522  AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD 581

Query: 429  LKCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQNS 250
               GQ+       L+D  L+AL+ GG     +QV++ +Q + + ++KW+ +Q F+E    
Sbjct: 582  ---GQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK 638

Query: 249  LEYSYFKKKNTVRWKVLMAFKRSVGL 172
            L+ +  +K+N  + + L+AFK   GL
Sbjct: 639  LKVAKLRKRNFKKMEALIAFKNWAGL 664


>ref|XP_006837135.1| hypothetical protein AMTR_s00110p00138300 [Amborella trichopoda]
            gi|548839728|gb|ERM99988.1| hypothetical protein
            AMTR_s00110p00138300 [Amborella trichopoda]
          Length = 606

 Score =  318 bits (815), Expect = 5e-84
 Identities = 193/572 (33%), Positives = 324/572 (56%), Gaps = 15/572 (2%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLSESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXX 1663
            K L N L+  + S     +LKRAF+ V+++LEK P   L+  D+++I+L+ +        
Sbjct: 37   KHLTNSLISHLSSLKDTQNLKRAFSIVILLLEKDPQ--LISLDSIQILLEAIKLADLTAP 94

Query: 1662 XXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRK-NMENSSECEHAR 1486
                      N   PP  +WG +  ++  + S+    ++   EIC    M+ S       
Sbjct: 95   CLALMKAMLRNKFYPPFDVWGPVSIELCCKNSSFPEFLKFFNEICSTVAMDESLNFMKPD 154

Query: 1485 RVAFNSFLCACLNLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLED 1306
               FN+ L AC    +V++AE + +R   +G+ PN  SF ++A++Y+K GL + +  L+ 
Sbjct: 155  LPTFNAALEACCRFGLVTEAENVFERISDMGLKPNSISFSIMARIYSKKGLKEKILELQK 214

Query: 1305 IMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISKVYD---- 1138
             M    +  + ++Y+GL++GY++ GDL+SAS  +L ++R      +E      V D    
Sbjct: 215  QMHQLNLEHDAKFYSGLIIGYISSGDLKSASLFVLQMLREGSERSSEQVSQLGVLDEGTY 274

Query: 1137 KFVRE-FLDKERDEDLVGFVIQAQGAESAAL-------SVVTDALIRLGCLEKAHAILDK 982
            K + E FL + + ++L   ++     ES          S V DA I LG ++KAH++LD+
Sbjct: 275  KAISEGFLGQGKIKELAKLIMDCLEIESKLAVTAKSFGSGVIDASIGLGFVDKAHSVLDE 334

Query: 981  LYAKNLKAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKD 802
            + A+    GI  ++ +L++YCK+++TT+A++++ ++       D  +Y+ +ID  ++ +D
Sbjct: 335  MNAQGASVGIEIYTLILKAYCKDHRTTEATQLVSEIGSLGLRLDAESYETLIDIAMTNQD 394

Query: 801  YESAISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWN 622
            ++SA S FR M+E  I  +  SY+TIM GLTE  +P+LMAA L E   D R++VGT+DWN
Sbjct: 395  FQSAFSLFRDMREARIPTLKMSYLTIMAGLTENHRPELMAAFLDEVVSDPRVEVGTHDWN 454

Query: 621  SVIHSFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKS 442
            SVIHS+C++G L DAR+TF+ M+   FE NE T+L L + Y A + +  +  L   +RK 
Sbjct: 455  SVIHSYCKLGRLEDARRTFRRMVFLHFEPNEQTFLSLAHGYCAAEKFFSVLLLWTEMRKR 514

Query: 441  IYKALKCGQESPLL--NTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVF 268
            +   +  G+E+P +  N  L+D  L+ L+ GG    A+QV++ TQ L I ++KWR +QVF
Sbjct: 515  M--MVNAGKENPSIKFNHNLVDAFLYGLIKGGFFDAAMQVVEKTQELKIFVDKWRYKQVF 572

Query: 267  LERQNSLEYSYFKKKNTVRWKVLMAFKRSVGL 172
            +E    L+    +KKN  + + ++AFK  VGL
Sbjct: 573  METHKKLKLQRLRKKNYRKVEAILAFKNWVGL 604


>ref|XP_006354656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like
            isoform X1 [Solanum tuberosum]
            gi|565376327|ref|XP_006354657.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At1g69290-like isoform X2 [Solanum tuberosum]
          Length = 654

 Score =  317 bits (811), Expect = 1e-83
 Identities = 186/566 (32%), Positives = 313/566 (55%), Gaps = 9/566 (1%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLSESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXX 1663
            K L N ++  + S +  H++KRAFA V+ +LEK     LL+ +T+ ++L ++        
Sbjct: 95   KSLTNSVITHLSSLNDTHNIKRAFASVVFLLEK--KQELLKPETVHVLLNSMREANSAAP 152

Query: 1662 XXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSECEHARR 1483
                      N    P S+WG +L +I  +       +++  E CR  ++          
Sbjct: 153  AFALVKCMFKNRFFIPFSLWGDVLVEICRKNGNFGGFLQVFNENCRVAIDEKLNFLKPSL 212

Query: 1482 VAFNSFL-CACLNLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLED 1306
             A N+ L C C  ++ ++ AE++++    LG+ P+  SFGLLA LYA  GL + +A LE 
Sbjct: 213  AACNAALECCCREVESITDAEKVVETMSVLGVRPDECSFGLLAYLYALKGLKEKIAELEG 272

Query: 1305 IMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISKV-YDKFV 1129
            ++  +G   +  + + L+ G++  G+L S S  +L  +R    +D +     KV Y + V
Sbjct: 273  LISGFGFPDKGVFLSNLISGFVKCGNLASVSATILQGVRE---TDGQGFCFQKVTYSEVV 329

Query: 1128 REFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILDKLYAK 970
              FL     +DL   + + Q  ES ++ V       + +A + LG L+KAH I D++ A+
Sbjct: 330  SGFLQNGSIKDLAALIGETQTLESPSVIVERSVGYGIINACVNLGLLDKAHMIFDEMNAQ 389

Query: 969  NLKAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESA 790
                G+G +  +L++YCKE +T +A++++ D+       D + YD +I+A +S +D++SA
Sbjct: 390  GASLGLGVYLPILKAYCKEQRTAEAAQLVTDISGLGLQLDVATYDALIEASMSCQDFQSA 449

Query: 789  ISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIH 610
             S FR M+E  I ++  SY+TIMTGLTE  +P+LM+A L E   D RI++GT+DWNS+IH
Sbjct: 450  FSVFRDMREARIPDLQGSYLTIMTGLTESHRPELMSAFLDEIVEDPRIEIGTHDWNSIIH 509

Query: 609  SFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKA 430
            +FC+ G L DAR+TF+ M   +FE NE TYL L+N     + Y ++  L   +++ +   
Sbjct: 510  AFCKAGRLEDARRTFRRMTFLQFEPNEQTYLSLINGNMTVEKYFNVMMLWNEVKRKVSAE 569

Query: 429  LKCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQNS 250
               G+    L++ L+D  L+AL+ GG     +QV++ +Q   I ++KWR +Q F+E+   
Sbjct: 570  ---GETKLKLDSSLVDAFLYALVKGGFFDAVMQVVEKSQERKIFVDKWRYKQAFMEKHKK 626

Query: 249  LEYSYFKKKNTVRWKVLMAFKRSVGL 172
            L  S  ++KN  + + L+AFK   GL
Sbjct: 627  LRVSKLRRKNRGKMEALIAFKNWAGL 652


>gb|EMJ26324.1| hypothetical protein PRUPE_ppa002589mg [Prunus persica]
          Length = 655

 Score =  313 bits (802), Expect = 2e-82
 Identities = 185/565 (32%), Positives = 318/565 (56%), Gaps = 8/565 (1%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLSESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXX 1663
            K L N L+  + S   +H+LKRAFA V+ ++EK P    L+F+T+  +L  +        
Sbjct: 96   KSLTNSLITHLSSLGDIHNLKRAFATVVYVVEKNP--GFLDFETVGTLLDAMKCANTAAP 153

Query: 1662 XXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSECEHARR 1483
                      N    P S+WG +L +I+ +       + +  E CR  ++   E      
Sbjct: 154  AFALIKSVFKNRFFLPFSVWGNVLIEISRKNGNFVAFLRVFEENCRIALDEKLESMKPDL 213

Query: 1482 VAFNSFLCACLN-LDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLED 1306
             A N+ L  C   L+ VS AE++++    LG+ P+  SFG LA LYA  GL + +  LE 
Sbjct: 214  AACNAALEGCCRELESVSDAEKVVETMAVLGVRPDESSFGFLAYLYALKGLEEKITELEG 273

Query: 1305 IMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISKVYDKFVR 1126
            +M  +G   ++ + + L+ GY+  G LES S  +L ++R E   D  + G  + Y + V+
Sbjct: 274  LMGGFGFSNKRVFQSNLINGYVKSGKLESVSATILRILR-EGDGDFLNLG-EETYCEVVK 331

Query: 1125 EFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILDKLYAKN 967
             +L     ++L   +I+AQ  ES+ + V       + +A + +G  +KAH ILD++ A+ 
Sbjct: 332  GYLMSASVKELATLIIEAQKLESSTVVVDRSVGYGIVNACVHIGLSDKAHGILDEMNAQG 391

Query: 966  LKAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESAI 787
               G+G +  +L++YCKE++T +A++++ D+       D   YD +I++ +S++D++SA 
Sbjct: 392  GSLGLGVYVPILKAYCKEHRTAEATQLVMDVSNSGLQLDTGTYDALIESSMSSQDFQSAF 451

Query: 786  STFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIHS 607
            S +R M+E  I+++  SY+TIMTGL E  +P+LMAA L E   D RI+VGT+DWNS+IH+
Sbjct: 452  SLYRDMREARISDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVGTHDWNSIIHA 511

Query: 606  FCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKAL 427
            FC+ G L DAR+TF+ M+  + + NE TYL L++ Y + + Y  +  L   +++++    
Sbjct: 512  FCKAGRLEDARRTFRRMIFLQHKPNEQTYLSLISGYVSVEKYFCVLMLWHEVKRNVSVD- 570

Query: 426  KCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQNSL 247
              G++    +  ++D  L+AL+ GG     +QV++ +Q + + ++KWR +Q F+E    L
Sbjct: 571  --GEKGIKFDHNMVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWRYKQAFMETHKKL 628

Query: 246  EYSYFKKKNTVRWKVLMAFKRSVGL 172
            + S  +K+N  + + L+AFK   GL
Sbjct: 629  KVSKLRKRNFRKMEALVAFKNWAGL 653


>ref|XP_004297237.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like
            [Fragaria vesca subsp. vesca]
          Length = 651

 Score =  311 bits (797), Expect = 6e-82
 Identities = 190/568 (33%), Positives = 317/568 (55%), Gaps = 11/568 (1%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLSESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXX 1663
            K L N ++  + S   +H+LKRAFA V+ ++EK P   LLEF+T+  VL  +        
Sbjct: 92   KSLTNSMITHLASLGEIHNLKRAFASVVYVVEKSPE--LLEFETVGSVLGAMNCANTAAP 149

Query: 1662 XXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSECEHARR 1483
                      N    P S+WG+++ +I+         + +  E CR  +E   E      
Sbjct: 150  AFALIQCMFKNRFFLPFSVWGSVVVEISRRNGNFGAFLRVFEENCRVALEEKMEVMKPDL 209

Query: 1482 VAFNSFL--CACLNLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLE 1309
             A N+ L  C C  L+ VS AE++++    LG+ P+  SFG LA LYA  GL + ++ LE
Sbjct: 210  AACNAALEGCCC-ELESVSGAEKVVETMVGLGVRPDECSFGFLAYLYALKGLGEKISELE 268

Query: 1308 DIMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRN--EFCSDNEDCGISKVYDK 1135
             +M  +G    + +   L+ GY+  G LE  S+ +L  +R     C D +     + Y +
Sbjct: 269  GLMGGFGFSDRRVFRNNLINGYVKSGKLEFVSETILQGLRECGGECLDLD----GETYCR 324

Query: 1134 FVREFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILDKLY 976
             VR FLD    ++L   +I+AQ  ES+ ++V       V +A + +G  +KAH+ILD++ 
Sbjct: 325  VVRGFLDNGNVKELATLIIEAQKLESSTVAVDRSIGYGVVNACVGIGLSDKAHSILDEMN 384

Query: 975  AKNLKAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYE 796
            A+    G+G +  +L++Y KE++T +A++++ D+       D   YD +I+A IS++D++
Sbjct: 385  AQGGTLGLGVYVPILKAYSKEHRTAEATQLVMDISNSGLKLDTETYDTLIEASISSQDFQ 444

Query: 795  SAISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSV 616
            SA S FR M+E    ++  SY+T+MTGL E  +P+LMAA L E   D RI+VGT+DWNS+
Sbjct: 445  SAFSLFRDMREARTPDLKGSYLTMMTGLMENHRPELMAAFLDEVVEDPRIEVGTHDWNSI 504

Query: 615  IHSFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIY 436
            IH+FC+ G L DAR+TF+ M+  ++  N+ TYL L++ Y + + Y  +  L   ++++I 
Sbjct: 505  IHAFCKAGRLEDARRTFRRMVFLQYNPNDQTYLSLISGYVSVEKYFCVLMLWHEVKRNIS 564

Query: 435  KALKCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQ 256
                 G++    +  ++D  L+AL+ GG     +QV++ +Q + I ++KWR +Q F+E  
Sbjct: 565  VD---GEKGLKFDHNMVDAFLYALVKGGFFDAVMQVVEKSQEMKIFVDKWRYKQAFMETH 621

Query: 255  NSLEYSYFKKKNTVRWKVLMAFKRSVGL 172
              L+ S  +K++  + + L+AFK   GL
Sbjct: 622  KKLKVSKLRKRSFRKMEALVAFKNWAGL 649


>ref|XP_004229722.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like
            [Solanum lycopersicum]
          Length = 654

 Score =  310 bits (793), Expect = 2e-81
 Identities = 185/565 (32%), Positives = 311/565 (55%), Gaps = 8/565 (1%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLSESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXX 1663
            K L N ++I + S +   ++KRAFA V+ +LEK     LL+ +T+ ++L ++        
Sbjct: 95   KSLTNSVIIHLSSLNDTLNIKRAFASVVFLLEK--KQELLKPETVHVLLNSMRDANSAAP 152

Query: 1662 XXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSECEHARR 1483
                      N    P ++WG +L +I  +       +++  E CR  ++          
Sbjct: 153  AFALVKCMFKNRYFIPFNLWGDVLVEICRKNGNFGGFLQVFNENCRLAIDEKLNFLKPSL 212

Query: 1482 VAFNSFL-CACLNLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLED 1306
             A N+ L C C  ++  + AE++++    LG+ P+  SFGLLA LYA  GL + +A LE 
Sbjct: 213  EACNAALECCCREIESTTDAEKVVETMSVLGVRPDECSFGLLAYLYALKGLKEKIAELEG 272

Query: 1305 IMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISKVYDKFVR 1126
            ++  +G   +  + + L+ G++  G+L S S  +L  +R E C     C   + Y + V 
Sbjct: 273  LISGFGFPDKGVFLSNLISGFVKCGNLASVSATILQGVR-ETCGQGL-CFEERTYSEVVS 330

Query: 1125 EFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILDKLYAKN 967
             FL     +DL   + + Q  ES ++ V       + +A + LG L+KAH I D++ A+ 
Sbjct: 331  GFLQNGSIKDLAMLISETQTLESPSVIVERSVGYGIINACVNLGLLDKAHTIFDEMNAQG 390

Query: 966  LKAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESAI 787
               G+G +  +L++Y KE +T +A++++ D+       D + YD +I+A +S +D++SA 
Sbjct: 391  AALGLGVYLPILKAYRKEQRTAEAAQLVTDISGLGLQLDVATYDALIEASMSCQDFQSAF 450

Query: 786  STFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIHS 607
            S FR M+E  I ++  SY+TIMTGLTE  +P+LMAA L E   D RI++GT+DWNS+IH+
Sbjct: 451  SMFRDMREARIPDLQGSYLTIMTGLTESHRPELMAAFLDEIVEDPRIEIGTHDWNSIIHA 510

Query: 606  FCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKAL 427
            FC+ G L DAR+TF+ M   +FE NE TYL L+N     + Y ++  L   +++ +    
Sbjct: 511  FCKAGRLEDARRTFRRMTFLQFEPNEQTYLSLINGNVTVEKYFNVMMLWNEVKRKVSAE- 569

Query: 426  KCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQNSL 247
              G+    L++ L+D  L+AL+ GG     +QV++ +Q + I ++KWR +Q F+E+   L
Sbjct: 570  --GETKLKLDSSLVDAFLYALVKGGFFDAVMQVVEKSQEMKIFVDKWRYKQAFMEKHKKL 627

Query: 246  EYSYFKKKNTVRWKVLMAFKRSVGL 172
              S  ++KN  + + L+AFK   GL
Sbjct: 628  RVSKLRRKNRGKMEALIAFKNWAGL 652


>tpg|DAA57305.1| TPA: hypothetical protein ZEAMMB73_061992 [Zea mays]
          Length = 680

 Score =  310 bits (793), Expect = 2e-81
 Identities = 192/554 (34%), Positives = 298/554 (53%), Gaps = 16/554 (2%)
 Frame = -1

Query: 1785 LKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXXXXXXXXXXXXNGS-CPPIS 1609
            LKRAFA  + +LEK PH   +    LE +                       G   P  S
Sbjct: 137  LKRAFAAAVFLLEKSPHAAPVPEPALEALFSAFVAAGSAAPAVALARAMLRCGRRLPAFS 196

Query: 1608 MWGALLEKIAEEKSTAFYA-IEICLEICRKNMENSSECEHAR----RVAFNSFLCACLN- 1447
            +WG  L ++      AF A + +  E C+  +E  S  E A     R A NS L  C   
Sbjct: 197  VWGHPLIELTRTDPGAFAAFLTLFDEACKLVVEEKSPAEAAAMRPDRAACNSVLSGCCRG 256

Query: 1446 LDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQY 1267
            L  ++ AE +++   A+G++P+V SFG LA LYA  G+   V  L+ +    G   ++ +
Sbjct: 257  LGSLADAERVLETMSAVGVSPDVESFGCLAFLYAWRGVPSRVDELDTLFDALGF-SKKGF 315

Query: 1266 YAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISKVYDKFVREFLDKERDEDLVG 1087
            +  LV GYL  GD ES S  +L  +++    D+      + Y +  + F+D+ R  +L  
Sbjct: 316  FKNLVSGYLKSGDFESVSPIILRAVKDRRVGDDNGLD-EETYTEVAQCFVDRARIRELAQ 374

Query: 1086 FVIQAQGAESAALSV---------VTDALIRLGCLEKAHAILDKLYAKNLKAGIGPWSSV 934
             +IQA   E A  S+         + +A + LG L KAH+ILD++ A+    G+G +SS+
Sbjct: 375  LIIQAHEIELAQQSISVEDSVGFGIVNACVELGLLNKAHSILDEMTAQGASVGLGVYSSI 434

Query: 933  LRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESAISTFRKMKERGI 754
            L++YCKE KT +A++++ ++       D  +YD +IDA ++A D++SA + F+ M+E  +
Sbjct: 435  LKAYCKEQKTAEAAQLVAEISAAGLQLDAGSYDALIDASMTAHDFQSAFALFKDMREARL 494

Query: 753  AEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIHSFCQIGCLFDAR 574
             E+ TSY+TIMTGLTE  KP LMA+ L     D RI++ T+DWNS+IH+FC++G L DAR
Sbjct: 495  PELRTSYLTIMTGLTENNKPGLMASFLDSVVDDPRIEIATHDWNSIIHAFCKVGRLDDAR 554

Query: 573  KTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKALKCGQESPLLNT 394
            +T++ M+  RFE N  TYL L+N Y + + Y  +  L   +R+        G E    N 
Sbjct: 555  RTYRRMVFLRFEPNNQTYLSLINGYVSTEKYFSVLILWTEVRRR-------GIE---FNH 604

Query: 393  VLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQNSLEYSYFKKKNTV 214
             L+D  L+AL+ GG    A+QVI+  Q   I I+KWR +Q F+E    L+ +  +K+N  
Sbjct: 605  ELIDAFLYALVKGGFFDMAMQVIEKAQEFKIFIDKWRYKQAFMETHKKLKVAKLRKRNFR 664

Query: 213  RWKVLMAFKRSVGL 172
            + + L+AF+   G+
Sbjct: 665  KMEALVAFRNWAGI 678


>gb|EOY01697.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 655

 Score =  309 bits (792), Expect = 2e-81
 Identities = 182/566 (32%), Positives = 312/566 (55%), Gaps = 9/566 (1%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLSESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXX 1663
            K L N L+  + S    H+LKRAFA V+ ++EK P    L F+T+  VL+++        
Sbjct: 96   KPLTNSLITYLSSLKDTHNLKRAFASVVFVIEKNPKS--LSFETVTSVLRSMKIANTAAP 153

Query: 1662 XXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSECEHARR 1483
                      N    P  +WG +L  I+ +  +    + +  E CR  ++   +      
Sbjct: 154  AFALIKCMLKNRYFMPFVLWGDMLVDISRKNGSFVAFLRVFEECCRIAIDEKLDYMKPDL 213

Query: 1482 VAFNSFL-CACLNLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLED 1306
             A N+ L C C  L  VS AE++++    LG+ P+  SFG L+ LYA  GL + +  L++
Sbjct: 214  AACNAALECCCYELKSVSDAEKVVETMSVLGVRPDESSFGFLSYLYALKGLEEKIDELKN 273

Query: 1305 IMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGIS-KVYDKFV 1129
            +M  +G+  ++  Y+ L+ GY   G ++  S  +L  +R     +  D   S + Y + V
Sbjct: 274  LMLEFGLSNKKMVYSSLIGGYAKSGKIDLVSATILRSLRE---GNGNDLDFSDETYCEVV 330

Query: 1128 REFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILDKLYAK 970
            + +L     + L   +I+AQ  +S+ + V       +  A I LG  +KAH+ILD++ A+
Sbjct: 331  KGYLQNGVIKSLACLIIEAQKLQSSVVEVDKSIGYGIISACINLGLSDKAHSILDEMNAQ 390

Query: 969  NLKAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESA 790
                G+G +  +L++YCKE++T +A++++ D+       D   YD +I+A ++++D++SA
Sbjct: 391  GGSVGLGVYVPILKAYCKEHRTAEATQLVMDISSLALQLDAEMYDALIEASMTSQDFQSA 450

Query: 789  ISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIH 610
             + FR M+E  I ++  SY+TIMTGL E ++P+LMAA L E   D R++V T+DWNS+IH
Sbjct: 451  FTLFRDMREARIPDLKGSYLTIMTGLMENQRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 510

Query: 609  SFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKA 430
            +FC+ G L DAR+TF+ M   +FE N+ TYL L+N Y   + Y  +  L   ++   +K 
Sbjct: 511  AFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLINGYVTAEKYFSVLMLWNEVK---WKI 567

Query: 429  LKCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQNS 250
               G++    +  L+D  L+AL+ GG     +QV++ +Q + I ++KWR +Q F+E+   
Sbjct: 568  SGDGEKGIKFDHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKIFVDKWRYKQAFMEKHKK 627

Query: 249  LEYSYFKKKNTVRWKVLMAFKRSVGL 172
            L+ S  ++++  + + L+AFK   GL
Sbjct: 628  LKVSKLRRRSFRKMEALIAFKNWAGL 653


>ref|XP_002458620.1| hypothetical protein SORBIDRAFT_03g036830 [Sorghum bicolor]
            gi|241930595|gb|EES03740.1| hypothetical protein
            SORBIDRAFT_03g036830 [Sorghum bicolor]
          Length = 674

 Score =  309 bits (791), Expect = 3e-81
 Identities = 191/554 (34%), Positives = 300/554 (54%), Gaps = 16/554 (2%)
 Frame = -1

Query: 1785 LKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXXXXXXXXXXXXNGS-CPPIS 1609
            LKRAFA  + +LEK PH   +    L  +   L                   G   P  S
Sbjct: 131  LKRAFAAAVFLLEKSPHAAPVPEPALGALFSALAVAGSAAPAVALARAMLRCGRRLPAFS 190

Query: 1608 MWGALLEKIAEEKSTAFYA-IEICLEICRKNMENSSECEHA----RRVAFNSFLCACLN- 1447
            +WG  L ++      AF A +++  E C+  +E  S  E A     R A N+ L  C   
Sbjct: 191  VWGHPLIELTRADPGAFAAFLKVFDEACKLVVEEKSPAEAAVMRPDRAACNAILSGCCRG 250

Query: 1446 LDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQY 1267
            L  +  AE +++   A+G++P+V SFG LA LYA  G+   V  L+ ++   G   ++ +
Sbjct: 251  LGSLVDAERVLETMSAVGVSPDVESFGCLAFLYAWRGVRSRVDELDTLLDALGF-SKKGF 309

Query: 1266 YAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISKVYDKFVREFLDKERDEDLVG 1087
            +  LV GYL  GD ES S  +L  ++     D+      + Y +  + F+D+ R ++L  
Sbjct: 310  FKNLVSGYLKSGDFESVSPIILRAVKERRVGDDNGFD-EETYSEVAQCFVDQSRIKELAQ 368

Query: 1086 FVIQAQGAESAALSV---------VTDALIRLGCLEKAHAILDKLYAKNLKAGIGPWSSV 934
             +IQA   E    S+         + +A + LG L KAH+ILD++ A+    G+G +SS+
Sbjct: 369  LIIQAHEIELTQQSMSVEDSVGFGIVNACVELGLLNKAHSILDEMTAQGASIGLGVYSSI 428

Query: 933  LRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESAISTFRKMKERGI 754
            L++YCKE+KT +A++++ ++       D  +YD +IDA ++A D++SA + F+ M+E  +
Sbjct: 429  LKAYCKEHKTAEAAQLVAEISAAGLKLDAGSYDALIDASMTAHDFQSAFALFKDMREARL 488

Query: 753  AEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIHSFCQIGCLFDAR 574
             E+ TSY+TIMTGLTE  KP LMA+ L     D RI++ T+DWNS+IH+FC++G L DAR
Sbjct: 489  PELRTSYLTIMTGLTENNKPGLMASFLDSVVDDPRIEIATHDWNSIIHAFCKVGRLEDAR 548

Query: 573  KTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKALKCGQESPLLNT 394
            +T++ M+  RFE N  TYL L+N Y + + Y ++  L   +R+        G E    N 
Sbjct: 549  RTYRRMVFLRFEPNNQTYLSLINGYVSAEKYFNVLILWTEVRRK-------GTE---FNH 598

Query: 393  VLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQNSLEYSYFKKKNTV 214
             L+D  L+AL+ GG    A+QVI+  Q   I I+KWR +Q F+E    L+ +  +K+N  
Sbjct: 599  ELIDAFLYALVKGGFFDMAMQVIEKAQEFKIFIDKWRYKQAFMETHKKLKVAKLRKRNFR 658

Query: 213  RWKVLMAFKRSVGL 172
            + + L+AFK   G+
Sbjct: 659  KMEALVAFKNWAGI 672


>emb|CBI27289.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  306 bits (783), Expect = 3e-80
 Identities = 177/529 (33%), Positives = 301/529 (56%), Gaps = 9/529 (1%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLSESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXX 1663
            K L N L+  + S   L++LKRAFA  + +LEK P  +LL+F T+  +L ++        
Sbjct: 96   KSLANSLIAHLASLHDLYNLKRAFASAVFLLEKNP--SLLDFGTVRTLLGSMNSANTAAP 153

Query: 1662 XXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSECEHARR 1483
                      N    P SMWG ++ +I     +    + +  E CR  ++   E      
Sbjct: 154  AFALINCMFKNRYFMPFSMWGGVIVEITRRNRSFVAFLRVFNETCRIAIDEKLESMKPDL 213

Query: 1482 VAFNSFLCACL-NLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLED 1306
             A N  L  C  +L+ VS+AE++++    LGI P+  SFG LA LYA  GL + +  LE 
Sbjct: 214  DACNVALEGCSQDLESVSEAEKVVEMMSVLGIQPDESSFGFLAYLYALKGLEEKIVELEG 273

Query: 1305 IMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISK-VYDKFV 1129
            +MR +G   ++  Y+ L+  Y+  G+LE  S+ +   +R +   D +    S+  Y + V
Sbjct: 274  LMRGFGFSSKKVIYSYLINAYVKSGNLEYVSRTIFRSLRED---DEQGPNFSEETYCEVV 330

Query: 1128 REFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILDKLYAK 970
            + FL     +DL   +I+ Q  E ++++V       +  A + LG L+KAH+ILD++  +
Sbjct: 331  KGFLQNGSIKDLASLIIETQKLEPSSIAVDRSIGYGIISACVSLGFLDKAHSILDEMNVQ 390

Query: 969  NLKAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESA 790
             +  G+G + S+L+++CKE++T +A++++ ++       D  +YD +I+A +S++D++SA
Sbjct: 391  GVSVGLGVYVSILKAFCKEHRTAEAAQLVTEISSLGLQLDAGSYDALIEASMSSQDFQSA 450

Query: 789  ISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIH 610
             S FR M+E  + ++  SY+T+MTGLTE  +P+LMAA L E   D R++VGT+DWNS+IH
Sbjct: 451  FSLFRDMREARVPDMKGSYLTMMTGLTENHRPELMAAFLDEIVEDPRVEVGTHDWNSIIH 510

Query: 609  SFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKA 430
            +FC++G L DAR+TF+ M+  +FE N+ TYL L+N Y + + Y  +  L   +++ I   
Sbjct: 511  AFCKVGRLEDARRTFRRMIFLQFEPNDQTYLSLINGYASAEKYFSVLMLWNEVKRRISID 570

Query: 429  LKCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWR 283
               G++    +  L+D  L+AL+ GG     +QV++ +Q + I ++KWR
Sbjct: 571  ---GEKGVKFDHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKIFVDKWR 616


>gb|EXB44841.1| hypothetical protein L484_026421 [Morus notabilis]
            gi|587991060|gb|EXC75276.1| hypothetical protein
            L484_000401 [Morus notabilis]
          Length = 660

 Score =  305 bits (782), Expect = 3e-80
 Identities = 182/565 (32%), Positives = 316/565 (55%), Gaps = 8/565 (1%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLSESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXX 1663
            K L N L+  + S   +H+LKRAFA V+ ++EK P   LLEF+T+E +L +         
Sbjct: 101  KSLTNSLIAHLSSLDDVHNLKRAFASVVYVVEKNPE--LLEFETIEALLNSFKRANTAAP 158

Query: 1662 XXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSECEHARR 1483
                      N    P S+WG  + +I+ +  +    + +  E CR   +   +      
Sbjct: 159  AFALVKCMFKNRYFVPFSVWGNAIVEISRKNGSFAAFLRVFSENCRIATDEKLDFMKPDL 218

Query: 1482 VAFNSFL-CACLNLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLED 1306
             A N+ L   C  L  VS AE+++     LG+ P+  +FG L  LYA  GL + +  +E 
Sbjct: 219  DACNAALEGCCYQLQSVSDAEKVVGTMSVLGVRPDESTFGFLGYLYAFKGLEEKITEVER 278

Query: 1305 IMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISKVYDKFVR 1126
            +M  +       + + L+ GY+  G+L+S S  +L  +R E   +  + G  + Y + V+
Sbjct: 279  LMVWFCFKSRVGFRSNLISGYVKSGNLDSVSATILRGLR-EGGGEYFELG-EETYCEVVK 336

Query: 1125 EFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILDKLYAKN 967
             FL     + L   +I+AQ  E +A  V       + +A + +G  +KAH+ILD++ A+ 
Sbjct: 337  GFLQNGGIKALATLIIEAQKLEPSADMVDRSVGYGIINACVNVGLSDKAHSILDEMNAQK 396

Query: 966  LKAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESAI 787
               G+G +  +L++YCKE++T +A++++ D+R    + D   YD +I+A +S++D++SA+
Sbjct: 397  GFLGLGVYLPILKAYCKEHRTAEATQLVMDIRNSGLELDVGTYDSLIEASMSSQDFQSAL 456

Query: 786  STFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIHS 607
            + FR M+E  ++++  SY+TIMTGL E  +P+LMAA L +   D R+KVGT+DWNS+IH+
Sbjct: 457  TLFRDMREARVSDLKGSYLTIMTGLMENNRPELMAAFLDDAVEDPRVKVGTHDWNSIIHA 516

Query: 606  FCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKAL 427
            FC+ G L DAR+TF+ M+  +F+ NE TYL L++ Y + + Y ++  L   +++++    
Sbjct: 517  FCKAGRLEDARRTFRRMIFLQFKPNEQTYLSLISGYVSAEKYFNVLMLWNEVKRNVSID- 575

Query: 426  KCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQNSL 247
              G++    +  L+D  L+AL+ GG     +QV++ +Q + I ++KWR +  F+E    L
Sbjct: 576  --GEKGIKFDHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKIFVDKWRYKHAFMETHKKL 633

Query: 246  EYSYFKKKNTVRWKVLMAFKRSVGL 172
            + S  +++N  + + L+AFK   GL
Sbjct: 634  KVSKLRRRNFRKMEALIAFKNWAGL 658


>ref|XP_006644828.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like
            [Oryza brachyantha]
          Length = 671

 Score =  305 bits (781), Expect = 4e-80
 Identities = 182/554 (32%), Positives = 297/554 (53%), Gaps = 16/554 (2%)
 Frame = -1

Query: 1785 LKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXXXXXXXXXXXXNGS-CPPIS 1609
            LKRAFA  + +LEK PH   +    L+ V  +L                   G   PP S
Sbjct: 128  LKRAFAAAVFLLEKSPHAEPVPEAALQAVFTSLAAAGSAAPALALVRALLRCGRRLPPFS 187

Query: 1608 MWGALLEKIAEEKSTAFYAI-----EICLEICRKNMENSSECEHARRVAFNSFLCACLNL 1444
             WG+ L ++    + AF A      E C ++  +   +S+        + N+ L  C  L
Sbjct: 188  TWGSPLVEVTRADTGAFAAFLKVFDEACKQVVAEKSPSSAAAIRPDLSSCNAILGGCCRL 247

Query: 1443 -DMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQY 1267
               V+ AE +++   A+G++P++ SFG LA LYA  G+   V  L++++   G   ++ +
Sbjct: 248  LGSVTDAERVLETMSAIGVSPDMDSFGCLAFLYAWRGIPSRVDELDNLLDALGF-SKKTF 306

Query: 1266 YAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISKVYDKFVREFLDKERDEDLVG 1087
            +  L+ GYL     ES S  +L  +      D     +   Y +  + F+D  R  +L  
Sbjct: 307  FKNLISGYLKSCSFESVSSVILRAVEERRVGDGSAFDLES-YTEVAQFFVDSGRIRELAQ 365

Query: 1086 FVIQAQGAESAALSV---------VTDALIRLGCLEKAHAILDKLYAKNLKAGIGPWSSV 934
             +I+AQ  ES   S+         + +A + LG L KAH+ILD++ A+    G+G +SS+
Sbjct: 366  LIIKAQETESLQQSLAVEDSVGFGIVNACVELGLLNKAHSILDEMTAQGASVGLGVYSSI 425

Query: 933  LRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESAISTFRKMKERGI 754
            L++YCKE +T +A++++ ++       D  +YD +IDA ++A D+ SA S F++M+E  +
Sbjct: 426  LKAYCKEQRTAEAAQLVSEISAAGIQLDAGSYDALIDASMTAHDFLSAFSLFKEMREARL 485

Query: 753  AEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIHSFCQIGCLFDAR 574
             ++ TSY+TIMTGLTE  +P+LMA+ L     D RI++ T+DWNS+IH+FC++G L DAR
Sbjct: 486  PDLRTSYLTIMTGLTENNRPELMASFLDSVVDDLRIEIATHDWNSIIHAFCKVGRLEDAR 545

Query: 573  KTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKALKCGQESPLLNT 394
            +T++ M+  R+E N  TYL L+N Y + + Y  +  L   +R+          +    N 
Sbjct: 546  RTYRRMVFLRYEPNNQTYLSLINGYVSAEKYFSVLILWTEVRR----------KGADFNH 595

Query: 393  VLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQNSLEYSYFKKKNTV 214
             L+D  L+AL+ GG    A+QVI+  Q L I ++KWR +Q F+E    L+ +  +K+N  
Sbjct: 596  ELIDAFLYALVKGGFFDMAMQVIEKAQELKIFLDKWRHKQAFMETHKKLKVAKLRKRNFR 655

Query: 213  RWKVLMAFKRSVGL 172
            + + L+AFK   GL
Sbjct: 656  KMEALIAFKNWAGL 669


>ref|XP_006301643.1| hypothetical protein CARUB_v10022087mg [Capsella rubella]
            gi|482570353|gb|EOA34541.1| hypothetical protein
            CARUB_v10022087mg [Capsella rubella]
          Length = 658

 Score =  305 bits (781), Expect = 4e-80
 Identities = 183/572 (31%), Positives = 317/572 (55%), Gaps = 15/572 (2%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLS-----ESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXX 1678
            K L+N L+  + +     E+  H LKRAFA    ++EK P   LLEF+T+  VL+++   
Sbjct: 93   KRLINSLITHLSNTEGSGENTSHRLKRAFASAAYVIEKDPI--LLEFETVRSVLESMKLA 150

Query: 1677 XXXXXXXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSEC 1498
                           N    P  +WG L+  I  E  +    +++  E CR  ++   + 
Sbjct: 151  KASGPALALVKCMFKNRYFVPFDLWGHLIIDICRENGSLAAFLKVFKESCRIAVDEKLDF 210

Query: 1497 EHARRVAFNSFLCACLN-LDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNV 1321
                 VA N+ L AC   L+ ++ A+ +I+    LG+ P+  SFG LA LYA+ G  + +
Sbjct: 211  MKPDLVASNAALEACCRQLESLADADNVIESMAVLGVKPDESSFGFLAYLYARKGFREKI 270

Query: 1320 ASLEDIMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISK-V 1144
            + LE++M  +G       Y+ ++ GY+  GDL+S S  +L+ ++     D +D    +  
Sbjct: 271  SELENLMDGFGFASRGILYSNMISGYVKNGDLDSVSDVILYSLKG----DGKDSSFGEET 326

Query: 1143 YDKFVREFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILD 985
            Y + V+ F++ +  + L   +I+AQ  ES+++         + +A ++LG  +KAH+IL+
Sbjct: 327  YLELVKGFIENKSVKSLAKVIIEAQKLESSSIDADSSVGFGIINACVKLGFSDKAHSILE 386

Query: 984  KLYAKNL-KAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISA 808
            ++ A+     GIG +  +L++YCKE +T +A++++ ++       +   YD +I+A ++ 
Sbjct: 387  EMIAQGGGSVGIGVYVPILKAYCKEYRTAEATQLVTEINSSGLQLEVEIYDALIEASMTN 446

Query: 807  KDYESAISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTND 628
            +D+ SA + FR M+E   A++  SY+TIMTGL E ++P+LMAA L E   D R++V ++D
Sbjct: 447  QDFISAFTLFRDMRETRGADLKGSYLTIMTGLLENQRPELMAAFLDEVVEDPRVEVNSHD 506

Query: 627  WNSVIHSFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLR 448
            WNS+IH+FC+ G L DAR+TF+ M+  R+E N  TYL L+N Y + + Y ++  L   ++
Sbjct: 507  WNSIIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGYVSGEKYFNVLLLWNEIK 566

Query: 447  KSIYKALKCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVF 268
              I       ++   L+  L+D  L+AL+ GG    A+QV++ +Q + I ++KWR +Q F
Sbjct: 567  GKISSVE--AEKRSKLDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIFVDKWRYKQAF 624

Query: 267  LERQNSLEYSYFKKKNTVRWKVLMAFKRSVGL 172
            +E    L     +K+N  + + L+AFK   GL
Sbjct: 625  METHKKLRLPKLRKRNYKKMESLVAFKNWAGL 656


>ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223549259|gb|EEF50748.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 650

 Score =  304 bits (779), Expect = 7e-80
 Identities = 180/566 (31%), Positives = 313/566 (55%), Gaps = 9/566 (1%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLSESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXX 1663
            K L N L+  + S     +LKRAFA V+  +EK P    L+F+T++ VL+++        
Sbjct: 91   KSLANSLITHLSSLQDTLNLKRAFASVIFFMEKNPQS--LDFETVQSVLESMKFANSAAP 148

Query: 1662 XXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSECEHARR 1483
                      +    P  +WG L+  I+++       +++  E  R  ++   +      
Sbjct: 149  AFALVKCMFKHRYFMPFHLWGGLIGHISKKNGMFVAFLKVFEESYRIAVDEKLDFMKPDL 208

Query: 1482 VAFNSFL-CACLNLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLED 1306
             A N  L C C  ++ VS A+ +I+    LGI P+  SFG LA LYA  GL   +  L+ 
Sbjct: 209  GACNLALECCCEEIESVSDADNVIEIMSVLGIKPDEMSFGFLAYLYALKGLQDRIVELKS 268

Query: 1305 IMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISK-VYDKFV 1129
            +M  + ++ ++ +Y+ L+ GY+  G+LES S  ++  +R E   D ++  I++  Y + V
Sbjct: 269  LMEGFSVLNKRLFYSNLIRGYVKSGNLESVSATIICSLREE---DEKNYNINEETYCEVV 325

Query: 1128 REFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILDKLYAK 970
            + FL     + L   +I+A+  E  ++ +       V +A + LG  +KAH+ILD++ AK
Sbjct: 326  KGFLKDGSLKGLANLIIEARKLEPDSIEIDKSISFGVINACVNLGLSDKAHSILDEMDAK 385

Query: 969  NLKAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESA 790
                G G +  +L++YCKE +T +A++++ ++       D  +YD +I+A ++++D++SA
Sbjct: 386  GGSVGFGVYVPILKAYCKEGRTAEATQLVMEISNLGLQLDAGSYDALIEASMTSQDFQSA 445

Query: 789  ISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIH 610
             + FR M+E    ++  SY+TIMTGL E  +P+LMAA L E   D RI+V T+DWNS+IH
Sbjct: 446  FTLFRDMRESRSPDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVKTHDWNSIIH 505

Query: 609  SFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKA 430
            +FC+ G L DA++TF+ M+  +FE N+ TYL L+N Y   + Y  +  L   +++ +   
Sbjct: 506  AFCKAGRLEDAKRTFRRMIFLQFEPNDQTYLSLINGYVTAEKYFSVLMLWSEIKRRVSND 565

Query: 429  LKCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQNS 250
                ++S   +  L+D  L+AL+ GG     +QV++ +Q + I ++KW+ +Q F+E    
Sbjct: 566  ---KEKSFKFDQNLVDAFLYALVKGGFFDAVMQVVEKSQEMKIFVDKWKYKQAFMETHKK 622

Query: 249  LEYSYFKKKNTVRWKVLMAFKRSVGL 172
            L+ S  +K+N  + + L+AFK   GL
Sbjct: 623  LKVSKLRKRNFRKMEALIAFKNWAGL 648


>gb|AAG52501.1|AC018364_19 unknown protein; 45065-49536 [Arabidopsis thaliana]
          Length = 860

 Score =  301 bits (770), Expect = 8e-79
 Identities = 183/572 (31%), Positives = 316/572 (55%), Gaps = 15/572 (2%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLS-----ESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXX 1678
            K L+N L+  +       ES  H LKRAFA    ++EK P   LLEF+T+  +L+++   
Sbjct: 295  KRLINSLITHLSGVEGSGESISHRLKRAFASAAYVIEKDPI--LLEFETVRTLLESMKLA 352

Query: 1677 XXXXXXXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSEC 1498
                           N    P  +WG L+  I  E  +    +++  E CR +++   E 
Sbjct: 353  KAAGPALALVKCMFKNRYFVPFDLWGHLVIDICRENGSLAPFLKVFKESCRISVDEKLEF 412

Query: 1497 EHARRVAFNSFLCACLN-LDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNV 1321
                 VA N+ L AC   ++ ++ AE +I+    LG+ P+  SFG LA LYA+ GL + +
Sbjct: 413  MKPDLVASNAALEACCRQMESLADAENVIESMAVLGVKPDELSFGFLAYLYARKGLREKI 472

Query: 1320 ASLEDIMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGIS-KV 1144
            + LE++M  +G    +  Y+ ++ GY+  GDL+S S  +L  ++       E+   S + 
Sbjct: 473  SELENLMDGFGFASRRILYSNMISGYVKSGDLDSVSDVILHSLKE----GGEESSFSVET 528

Query: 1143 YDKFVREFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILD 985
            Y + V+ F++ +  + L   +++AQ  ES+ + V       + +A + LG  +KAH+IL+
Sbjct: 529  YCELVKGFIESKSVKSLAKVILEAQKLESSYVGVDSSVGFGIINACVNLGFSDKAHSILE 588

Query: 984  KLYAKNL-KAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISA 808
            ++ A+     GIG +  +L++YCKE +T +A++++ ++       D    + +I+A ++ 
Sbjct: 589  EMIAQGGGSVGIGVYVPILKAYCKEYRTAEATQLVTEISSSGLQLDVEISNALIEASMTN 648

Query: 807  KDYESAISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTND 628
            +D+ SA + FR M+E  + ++  SY+TIMTGL E ++P+LMAA L E   D R++V ++D
Sbjct: 649  QDFISAFTLFRDMRENRVVDLKGSYLTIMTGLLENQRPELMAAFLDEVVEDPRVEVNSHD 708

Query: 627  WNSVIHSFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLR 448
            WNS+IH+FC+ G L DAR+TF+ M+  R+E N  TYL L+N Y + + Y ++  L   ++
Sbjct: 709  WNSIIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGYVSGEKYFNVLLLWNEIK 768

Query: 447  KSIYKALKCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVF 268
              I       ++   L+  L+D  L+AL+ GG    A+QV++ +Q + I ++KWR +Q F
Sbjct: 769  GKISSVE--AEKRSRLDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIFVDKWRYKQAF 826

Query: 267  LERQNSLEYSYFKKKNTVRWKVLMAFKRSVGL 172
            +E    L     +K+N  + + L+AFK   GL
Sbjct: 827  METHKKLRLPKLRKRNYKKMESLVAFKNWAGL 858


>ref|NP_177089.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|193806277|sp|P0C7R4.1|PP110_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g69290 gi|332196785|gb|AEE34906.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 658

 Score =  301 bits (770), Expect = 8e-79
 Identities = 183/572 (31%), Positives = 316/572 (55%), Gaps = 15/572 (2%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLS-----ESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXX 1678
            K L+N L+  +       ES  H LKRAFA    ++EK P   LLEF+T+  +L+++   
Sbjct: 93   KRLINSLITHLSGVEGSGESISHRLKRAFASAAYVIEKDPI--LLEFETVRTLLESMKLA 150

Query: 1677 XXXXXXXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSEC 1498
                           N    P  +WG L+  I  E  +    +++  E CR +++   E 
Sbjct: 151  KAAGPALALVKCMFKNRYFVPFDLWGHLVIDICRENGSLAPFLKVFKESCRISVDEKLEF 210

Query: 1497 EHARRVAFNSFLCACLN-LDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNV 1321
                 VA N+ L AC   ++ ++ AE +I+    LG+ P+  SFG LA LYA+ GL + +
Sbjct: 211  MKPDLVASNAALEACCRQMESLADAENVIESMAVLGVKPDELSFGFLAYLYARKGLREKI 270

Query: 1320 ASLEDIMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGIS-KV 1144
            + LE++M  +G    +  Y+ ++ GY+  GDL+S S  +L  ++       E+   S + 
Sbjct: 271  SELENLMDGFGFASRRILYSNMISGYVKSGDLDSVSDVILHSLKE----GGEESSFSVET 326

Query: 1143 YDKFVREFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILD 985
            Y + V+ F++ +  + L   +++AQ  ES+ + V       + +A + LG  +KAH+IL+
Sbjct: 327  YCELVKGFIESKSVKSLAKVILEAQKLESSYVGVDSSVGFGIINACVNLGFSDKAHSILE 386

Query: 984  KLYAKNL-KAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISA 808
            ++ A+     GIG +  +L++YCKE +T +A++++ ++       D    + +I+A ++ 
Sbjct: 387  EMIAQGGGSVGIGVYVPILKAYCKEYRTAEATQLVTEISSSGLQLDVEISNALIEASMTN 446

Query: 807  KDYESAISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTND 628
            +D+ SA + FR M+E  + ++  SY+TIMTGL E ++P+LMAA L E   D R++V ++D
Sbjct: 447  QDFISAFTLFRDMRENRVVDLKGSYLTIMTGLLENQRPELMAAFLDEVVEDPRVEVNSHD 506

Query: 627  WNSVIHSFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLR 448
            WNS+IH+FC+ G L DAR+TF+ M+  R+E N  TYL L+N Y + + Y ++  L   ++
Sbjct: 507  WNSIIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGYVSGEKYFNVLLLWNEIK 566

Query: 447  KSIYKALKCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVF 268
              I       ++   L+  L+D  L+AL+ GG    A+QV++ +Q + I ++KWR +Q F
Sbjct: 567  GKISSVE--AEKRSRLDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIFVDKWRYKQAF 624

Query: 267  LERQNSLEYSYFKKKNTVRWKVLMAFKRSVGL 172
            +E    L     +K+N  + + L+AFK   GL
Sbjct: 625  METHKKLRLPKLRKRNYKKMESLVAFKNWAGL 656


>ref|XP_003614163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355515498|gb|AES97121.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 660

 Score =  300 bits (768), Expect = 1e-78
 Identities = 186/572 (32%), Positives = 304/572 (53%), Gaps = 15/572 (2%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLS-ESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXX 1666
            K L N LL  + S    + +LKRAFA  L +++K+P  NLLEF+T+  +L ++       
Sbjct: 97   KPLTNSLLTHLSSLPDNILNLKRAFASTLFLIQKHP--NLLEFNTIHAILLSIKSANTAP 154

Query: 1665 XXXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSECEHAR 1486
                            P  +WG +L  IA         + +  E CR   +   E     
Sbjct: 155  PAFSLVRSMFKYRFFIPFHLWGGVLVDIARNNDNLAAFLPLFEENCRVAFDEKLEFMIPD 214

Query: 1485 RVAFNSFLCAC-LNLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLE 1309
              + N+ L AC   L  V+ A  +++    LG+ P+V SFG LA LYA  GL   +  L+
Sbjct: 215  VASCNAALEACCFCLQSVTDANRVVEIMSKLGVKPDVFSFGFLAYLYALKGLQDKIDELK 274

Query: 1308 DIMRLYGIIPEQQ-YYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISKVYDK- 1135
             +M  +G     + +Y+ L+ GY+   +L S    +L  +     +D +D G    +D+ 
Sbjct: 275  VLMVGFGYSKNNKCFYSNLISGYVKSANLVSVESTILSSL-----NDRDDEGEVWSFDRD 329

Query: 1134 ----FVREFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAIL 988
                 V+E+L K   + L   +I+AQ  ES+ + V       + +A + +G  +KAH+IL
Sbjct: 330  TFCLVVKEYLHKGNIKGLANLIIEAQKLESSNIKVDESIGFGIVNACVSIGLSDKAHSIL 389

Query: 987  DKLYAKNLKAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISA 808
            D++ A     G+G +  +L++YCKEN+T +AS ++ ++       D   YD +I+  +S 
Sbjct: 390  DEMNALGGSVGLGVYVPILKAYCKENRTAEASLLVTEISSSGLKLDVETYDALIETSMSG 449

Query: 807  KDYESAISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTND 628
            +D++S  S FR M+   + ++  SY+TIMTGL E  +P+LMAA L E   D RI+VGT+D
Sbjct: 450  QDFQSVFSLFRDMRGARVLDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVGTHD 509

Query: 627  WNSVIHSFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLR 448
            WNS+IH+FC+ G L DAR+TF+ M   +FE N+ TYL L+N Y + + Y D+  L   ++
Sbjct: 510  WNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLINGYVSAEKYFDVMMLWNEVK 569

Query: 447  KSIYKALKCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVF 268
            +   K    G +    +  L+D  L+A++ GG     +QV++ ++ + I ++KWR +Q F
Sbjct: 570  R---KLAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKSKEMKIFVDKWRYKQAF 626

Query: 267  LERQNSLEYSYFKKKNTVRWKVLMAFKRSVGL 172
            +E    L+ +  +KKN  + + L+AFK   GL
Sbjct: 627  METHKKLKVARLRKKNVRKMEALIAFKNWAGL 658


>ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like
            [Cucumis sativus] gi|449517162|ref|XP_004165615.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g69290-like [Cucumis sativus]
          Length = 656

 Score =  300 bits (767), Expect = 2e-78
 Identities = 183/564 (32%), Positives = 312/564 (55%), Gaps = 7/564 (1%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLSESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXXXXXXX 1663
            K L N L+  + S   +H+LKRAFA V+ ++EK P   LL+F +++ +L ++        
Sbjct: 98   KSLTNSLIAHLSSIGDVHNLKRAFASVVFVIEKKPE--LLDFGSVKALLASMKCANTAAP 155

Query: 1662 XXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSECEHARR 1483
                      N    P S+WG  L  I  +  +    + +  E CR  ++   +      
Sbjct: 156  ALSLIKCMFKNRCFVPFSVWGKELVDICRQSGSLIPFLRVFEENCRIALDERLDFLKPDL 215

Query: 1482 VAFNSFLCACLN-LDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLED 1306
            +A N+ L  C + L+ V+ AE++I+    L + P+  SFG LA LYA  GL + +  LE 
Sbjct: 216  IACNAALEGCCHELESVTDAEKVIETMSLLYLRPDEVSFGALAYLYALKGLDQKIIELEV 275

Query: 1305 IMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISKVYDKFVR 1126
            +M  +G   +  +++ LV GY+   +  + SK +L  +++E C  +   G  K Y + V+
Sbjct: 276  LMGSFGFTCKDLFFSNLVSGYVNASNFAAVSKTMLRSLKDE-CGSHVHFG-EKTYLEMVK 333

Query: 1125 EFLDKERDEDLVGFVIQAQGAESAAL---SV---VTDALIRLGCLEKAHAILDKLYAKNL 964
             F+     ++L   +I AQ  ES++    S+   + +A + +G L+KA  ILD++ ++ +
Sbjct: 334  GFIQSGNLKELSALIIDAQNLESSSAVDGSIGFGIINACVNIGWLDKAQYILDEMNSQGV 393

Query: 963  KAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISAKDYESAIS 784
              G+G +  +L++Y KE++T  A+++I D+       D  NYD +I+A +S +D++SA +
Sbjct: 394  SLGLGVYLPILKAYRKEHRTAAATQLIMDISSSGIQLDAENYDALIEASMSNQDFQSAFT 453

Query: 783  TFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTNDWNSVIHSF 604
             FR M+E   ++   SY+TIMTGL E  +P+LMAA L E   D  ++VGT+DWNS+IH+F
Sbjct: 454  LFRSMRETRKSDTKASYLTIMTGLMENHRPELMAAFLDEIVEDPLVEVGTHDWNSIIHAF 513

Query: 603  CQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLRKSIYKALK 424
            C+ G L DAR+T++ M   +FE NE T+L L+N Y + + Y  +  L   L+   +K   
Sbjct: 514  CKAGRLEDARRTYRRMKFLQFEPNEQTFLSLINGYVSAERYFCVLMLWNELK---WKVTP 570

Query: 423  CGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVFLERQNSLE 244
             G+    L+  L+D  L+AL+ GG     +QV++ T+   I I+KW+ +Q F+E    L+
Sbjct: 571  NGESGIKLDNNLVDAFLYALVKGGFFDAVMQVVEKTKDTKIFIDKWKYKQAFMETHKKLK 630

Query: 243  YSYFKKKNTVRWKVLMAFKRSVGL 172
             +  +++N  + + L+AFK   GL
Sbjct: 631  VAKLRRRNYKKMESLIAFKNWAGL 654


>ref|XP_002888712.1| hypothetical protein ARALYDRAFT_339164 [Arabidopsis lyrata subsp.
            lyrata] gi|297334553|gb|EFH64971.1| hypothetical protein
            ARALYDRAFT_339164 [Arabidopsis lyrata subsp. lyrata]
          Length = 1042

 Score =  300 bits (767), Expect = 2e-78
 Identities = 178/567 (31%), Positives = 319/567 (56%), Gaps = 15/567 (2%)
 Frame = -1

Query: 1842 KVLVNDLLIRVLS-----ESALHDLKRAFADVLIILEKYPHHNLLEFDTLEIVLQNLTXX 1678
            K L+N L+  + +     E+  H LKRAFA    +++K P   LLEF+T+  +++++   
Sbjct: 93   KRLINSLITHLSNTEESGENTAHRLKRAFASAAYVIQKDPI--LLEFETVRTLMESMKLA 150

Query: 1677 XXXXXXXXXXXXXXXNGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENSSEC 1498
                           N    P  +WG L+  I  E  +    +++  E CR  ++   + 
Sbjct: 151  KAAGPALALVKCMFKNRYFVPFDLWGHLIIDICRENGSLAAFLKVFKESCRIAVDEKLDF 210

Query: 1497 EHARRVAFNSFLCACLN-LDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNV 1321
                 VA N+ L AC   L+ ++ A+ +I+    LG+ P+  SFG LA LYA+ GL + +
Sbjct: 211  MKPDLVASNAALEACCRQLESLADADNVIESMAVLGVKPDELSFGFLAYLYARKGLREKI 270

Query: 1320 ASLEDIMRLYGIIPEQQYYAGLVLGYLTRGDLESASKNLLFLIRNEFCSDNEDCGISK-V 1144
            + LE++M  +G    +  Y+ ++ GY+  GDL++ S  +L  ++     D ++ G  +  
Sbjct: 271  SELENLMDGFGFASRRILYSNMISGYVKSGDLDNVSDVILHSLKG----DGKESGFGEET 326

Query: 1143 YDKFVREFLDKERDEDLVGFVIQAQGAESAALSV-------VTDALIRLGCLEKAHAILD 985
            Y + V+ F++ +  + L   +I+AQ  ES+++         + +A + LG  +KAH+IL+
Sbjct: 327  YCELVKGFIESKSVKGLAKVIIEAQKLESSSIDADSSVGFGIINACVNLGFSDKAHSILE 386

Query: 984  KLYAKNL-KAGIGPWSSVLRSYCKENKTTKASKMIGDLRVEVCDFDYSNYDEVIDACISA 808
            ++ A+     GIG +  +L++YCKE +T +A++++ ++       D   Y+ +I+A ++ 
Sbjct: 387  EMIAQGGGSVGIGAYVPILKAYCKEYRTAEATQLVTEINSSGLQLDVEIYNALIEASMTN 446

Query: 807  KDYESAISTFRKMKERGIAEIHTSYMTIMTGLTEGRKPDLMAALLYENFLDSRIKVGTND 628
            +D+ SA + FR M+E  + ++  SY+TIMTGL E ++P+LMAA L E   D R++V ++D
Sbjct: 447  QDFISAFTLFRDMRETRVGDLKGSYLTIMTGLLENQRPELMAAFLDEVVEDPRVEVNSHD 506

Query: 627  WNSVIHSFCQIGCLFDARKTFQTMLKSRFEANENTYLPLVNAYRAKKMYCDISSLSMGLR 448
            WNS+IH+FC+ G L DAR+TF+ M+  R+E N  TYL L+N Y + + Y ++  L   ++
Sbjct: 507  WNSIIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGYVSGEKYFNVLLLWNEIK 566

Query: 447  KSIYKALKCGQESPLLNTVLLDKLLHALLFGGQVAEALQVIKMTQRLNISINKWRCQQVF 268
              I  +++  + S  L+  L+D  L+AL+ GG    A+QV++ +Q + I ++KWR +Q F
Sbjct: 567  GKI-SSMEAEKRSK-LDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIFVDKWRYKQAF 624

Query: 267  LERQNSLEYSYFKKKNTVRWKVLMAFK 187
            +E    L     +K+N  + + L+AFK
Sbjct: 625  METHKKLRLPKLRKRNYKKMESLVAFK 651