BLASTX nr result
ID: Ephedra28_contig00012686
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00012686
(691 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001765111.1| predicted protein [Physcomitrella patens] gi... 93 7e-17
ref|XP_006837385.1| hypothetical protein AMTR_s00111p00127690 [A... 89 1e-15
ref|XP_003560798.1| PREDICTED: DNA-directed RNA polymerase I sub... 87 5e-15
ref|XP_001689933.1| DNA-directed RNA polymerase I subunit [Chlam... 84 4e-14
ref|XP_002956702.1| hypothetical protein VOLCADRAFT_107352 [Volv... 83 9e-14
dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare] 82 2e-13
ref|XP_002965454.1| hypothetical protein SELMODRAFT_83849 [Selag... 82 2e-13
ref|XP_002984537.1| hypothetical protein SELMODRAFT_120289 [Sela... 82 2e-13
gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Ory... 80 6e-13
ref|NP_001051059.2| Os03g0711700 [Oryza sativa Japonica Group] g... 80 6e-13
gb|EAZ28342.1| hypothetical protein OsJ_12319 [Oryza sativa Japo... 80 6e-13
ref|XP_004982002.1| PREDICTED: DNA-directed RNA polymerase I sub... 78 3e-12
ref|XP_006650488.1| PREDICTED: DNA-directed RNA polymerase I sub... 77 4e-12
ref|XP_003078380.1| RNA polymerase III subunit C11 (ISS) [Ostreo... 77 4e-12
ref|XP_005850517.1| hypothetical protein CHLNCDRAFT_140360 [Chlo... 77 7e-12
gb|EGB08901.1| hypothetical protein AURANDRAFT_25278 [Aureococcu... 76 9e-12
ref|XP_001416763.1| predicted protein [Ostreococcus lucimarinus ... 76 1e-11
ref|XP_005651569.1| hypothetical protein COCSUDRAFT_83584 [Cocco... 75 1e-11
gb|ETV95831.1| hypothetical protein H310_10875 [Aphanomyces inva... 71 4e-10
gb|ETV75003.1| transcription factor S [Aphanomyces astaci] 71 4e-10
>ref|XP_001765111.1| predicted protein [Physcomitrella patens]
gi|162683698|gb|EDQ70106.1| predicted protein
[Physcomitrella patens]
Length = 130
Score = 93.2 bits (230), Expect = 7e-17
Identities = 38/55 (69%), Positives = 49/55 (89%)
Frame = +3
Query: 42 SEEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPKCHHKSTEN 206
++E DE+QQRA ++++CP CK+P LEYYT+QLRSADEGQTVF ECPKCHHK ++N
Sbjct: 75 AKESDEMQQRAVVNDECPRCKNPSLEYYTKQLRSADEGQTVFYECPKCHHKFSQN 129
>ref|XP_006837385.1| hypothetical protein AMTR_s00111p00127690 [Amborella trichopoda]
gi|548840003|gb|ERN00239.1| hypothetical protein
AMTR_s00111p00127690 [Amborella trichopoda]
Length = 102
Score = 89.0 bits (219), Expect = 1e-15
Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 RHLNLEPFVKIS-DSEEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECP 179
R LNLEPFV++ D+ E D+ QR ++E CP C +P LEY+T+QLRSADEGQTVF +CP
Sbjct: 33 RDLNLEPFVQLDKDTREEDKGVQRTVVNEPCPKCLNPQLEYHTKQLRSADEGQTVFYDCP 92
Query: 180 KCHHKSTENS 209
KC HK + N+
Sbjct: 93 KCRHKFSVNT 102
>ref|XP_003560798.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
[Brachypodium distachyon]
Length = 125
Score = 87.0 bits (214), Expect = 5e-15
Identities = 37/69 (53%), Positives = 48/69 (69%)
Frame = +3
Query: 3 RHLNLEPFVKISDSEEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPK 182
R L +EPFV + + ++D I QR + E CP C HP LEY+T+QLR+ADEGQTVF ECP+
Sbjct: 57 RELKIEPFVTLESAPKMDVIVQRVVVDETCPKCGHPQLEYHTKQLRAADEGQTVFYECPE 116
Query: 183 CHHKSTENS 209
C H N+
Sbjct: 117 CRHNFKVNN 125
>ref|XP_001689933.1| DNA-directed RNA polymerase I subunit [Chlamydomonas reinhardtii]
gi|158283921|gb|EDP09671.1| DNA-directed RNA polymerase
I subunit [Chlamydomonas reinhardtii]
Length = 124
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = +3
Query: 3 RHLNLEPFVKISDSEEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPK 182
R LEP VK + EE+ + ++RAT+ E CP C H LEYYT QLRSADEGQTVF EC
Sbjct: 56 RRFALEPLVKSVEDEELLKGRKRATVDEPCPKCNHRQLEYYTMQLRSADEGQTVFYECKN 115
Query: 183 CHHKSTENS 209
C HK ++N+
Sbjct: 116 CGHKYSQNT 124
>ref|XP_002956702.1| hypothetical protein VOLCADRAFT_107352 [Volvox carteri f.
nagariensis] gi|300258063|gb|EFJ42304.1| hypothetical
protein VOLCADRAFT_107352 [Volvox carteri f.
nagariensis]
Length = 124
Score = 82.8 bits (203), Expect = 9e-14
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = +3
Query: 3 RHLNLEPFVKISDSEEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPK 182
R LEP VK + EE+ + ++RAT+ E CP C+H +EYYT QLRSADEGQTVF EC K
Sbjct: 56 RRFALEPLVKSVEDEELLKGRKRATVDEPCPKCQHRPMEYYTMQLRSADEGQTVFYECRK 115
Query: 183 CHHKSTENS 209
C +K ++N+
Sbjct: 116 CGYKYSQNT 124
>dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 125
Score = 82.0 bits (201), Expect = 2e-13
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +3
Query: 3 RHLNLEPFVKISDSEEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPK 182
R L ++PFV + + +D + QR+ CP C H LEYYT+QLRSADEGQT+F ECP+
Sbjct: 57 RELKIKPFVVLESAPNLDIVVQRSLTERACPKCNHHELEYYTKQLRSADEGQTIFYECPE 116
Query: 183 CHHKSTENS 209
C H EN+
Sbjct: 117 CGHAFNENT 125
>ref|XP_002965454.1| hypothetical protein SELMODRAFT_83849 [Selaginella moellendorffii]
gi|300166268|gb|EFJ32874.1| hypothetical protein
SELMODRAFT_83849 [Selaginella moellendorffii]
Length = 115
Score = 82.0 bits (201), Expect = 2e-13
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 63 QQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPKCHHKSTENS 209
++R ++EDCP CK+P LEYYTRQLRSADEGQTVF ECPKC HK ++N+
Sbjct: 67 RRRCGVNEDCPKCKNPQLEYYTRQLRSADEGQTVFYECPKCRHKFSQNT 115
>ref|XP_002984537.1| hypothetical protein SELMODRAFT_120289 [Selaginella moellendorffii]
gi|300147925|gb|EFJ14587.1| hypothetical protein
SELMODRAFT_120289 [Selaginella moellendorffii]
Length = 115
Score = 82.0 bits (201), Expect = 2e-13
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 63 QQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPKCHHKSTENS 209
++R ++EDCP CK+P LEYYTRQLRSADEGQTVF ECPKC HK ++N+
Sbjct: 67 RRRCGVNEDCPKCKNPQLEYYTRQLRSADEGQTVFYECPKCRHKFSQNT 115
>gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Oryza sativa Japonica Group]
gi|108710721|gb|ABF98516.1| Transcription factor S-II
family protein, expressed [Oryza sativa Japonica Group]
Length = 126
Score = 80.1 bits (196), Expect = 6e-13
Identities = 36/69 (52%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 RHLNLEPFVKISDS-EEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECP 179
R L L+P+V + + +E D I +RAT++++C CK+P L+YYT+QLRSADEGQTVF +C
Sbjct: 57 RELKLDPYVILETTLKEEDVIVERATVNKECEKCKNPELQYYTKQLRSADEGQTVFYKCA 116
Query: 180 KCHHKSTEN 206
C H+ EN
Sbjct: 117 NCRHEFNEN 125
>ref|NP_001051059.2| Os03g0711700 [Oryza sativa Japonica Group]
gi|255674831|dbj|BAF12973.2| Os03g0711700 [Oryza sativa
Japonica Group]
Length = 154
Score = 80.1 bits (196), Expect = 6e-13
Identities = 36/69 (52%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 RHLNLEPFVKISDS-EEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECP 179
R L L+P+V + + +E D I +RAT++++C CK+P L+YYT+QLRSADEGQTVF +C
Sbjct: 85 RELKLDPYVILETTLKEEDVIVERATVNKECEKCKNPELQYYTKQLRSADEGQTVFYKCA 144
Query: 180 KCHHKSTEN 206
C H+ EN
Sbjct: 145 NCRHEFNEN 153
>gb|EAZ28342.1| hypothetical protein OsJ_12319 [Oryza sativa Japonica Group]
gi|218193626|gb|EEC76053.1| hypothetical protein
OsI_13248 [Oryza sativa Indica Group]
Length = 156
Score = 80.1 bits (196), Expect = 6e-13
Identities = 36/69 (52%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 RHLNLEPFVKISDS-EEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECP 179
R L L+P+V + + +E D I +RAT++++C CK+P L+YYT+QLRSADEGQTVF +C
Sbjct: 87 RELKLDPYVILETTLKEEDVIVERATVNKECEKCKNPELQYYTKQLRSADEGQTVFYKCA 146
Query: 180 KCHHKSTEN 206
C H+ EN
Sbjct: 147 NCRHEFNEN 155
>ref|XP_004982002.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
[Setaria italica]
Length = 123
Score = 77.8 bits (190), Expect = 3e-12
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +3
Query: 3 RHLNLEPFVKISDSEEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPK 182
R L +EPFV + + + + +R CP C HPI EYY+RQ+RSADEG+T F EC K
Sbjct: 57 RELKIEPFVTLESAPMQEVVVRRPKTRRPCPECNHPIAEYYSRQMRSADEGETTFYECMK 116
Query: 183 CHH 191
CHH
Sbjct: 117 CHH 119
>ref|XP_006650488.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Oryza
brachyantha]
Length = 125
Score = 77.4 bits (189), Expect = 4e-12
Identities = 37/68 (54%), Positives = 46/68 (67%)
Frame = +3
Query: 3 RHLNLEPFVKISDSEEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPK 182
R L L+PFV + + + + +RATI+ CP C + LEYYT+QLRSADEGQTVF EC
Sbjct: 57 RDLKLDPFVVLESTLKDETAVKRATINRLCPECGYHELEYYTKQLRSADEGQTVFFECRD 116
Query: 183 CHHKSTEN 206
C HK EN
Sbjct: 117 CRHKFNEN 124
>ref|XP_003078380.1| RNA polymerase III subunit C11 (ISS) [Ostreococcus tauri]
gi|116056832|emb|CAL53121.1| RNA polymerase III subunit
C11 (ISS) [Ostreococcus tauri]
Length = 136
Score = 77.4 bits (189), Expect = 4e-12
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3
Query: 30 KISDSEEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPKCHHKSTENS 209
K+ EEV ++RAT+ E CP CKH L +YT QLRSADEGQTVF ECPKC+H ++N+
Sbjct: 79 KVGAGEEVT--RERATVDEKCPKCKHKGLNFYTMQLRSADEGQTVFYECPKCNHTFSQNN 136
>ref|XP_005850517.1| hypothetical protein CHLNCDRAFT_140360 [Chlorella variabilis]
gi|307110179|gb|EFN58415.1| hypothetical protein
CHLNCDRAFT_140360 [Chlorella variabilis]
Length = 146
Score = 76.6 bits (187), Expect = 7e-12
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
Frame = +3
Query: 3 RHLNLEPFVKISDSEEVDEIQQ---RATISEDCPNCKHPILEYYTRQLRSADEGQTVFKE 173
R +EP +K + E +E+ + RAT+ E CP C +PILEYYT QLRSADEGQTVF E
Sbjct: 73 RQYAMEPLIKSREQLEFEELLKNRVRATVEEPCPRCGNPILEYYTMQLRSADEGQTVFYE 132
Query: 174 CPK--CHHKSTENS 209
CPK C ++ + N+
Sbjct: 133 CPKRDCGYRYSTNN 146
>gb|EGB08901.1| hypothetical protein AURANDRAFT_25278 [Aureococcus anophagefferens]
Length = 173
Score = 76.3 bits (186), Expect = 9e-12
Identities = 31/57 (54%), Positives = 42/57 (73%)
Frame = +3
Query: 39 DSEEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPKCHHKSTENS 209
D++ + RAT+ E+CP C HP+LE+YT Q+RS DEGQTVF EC KC HK ++N+
Sbjct: 117 DADAGPKKSTRATVEEECPECGHPVLEFYTMQMRSVDEGQTVFYECLKCRHKFSQNN 173
>ref|XP_001416763.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576989|gb|ABO95056.1| predicted protein
[Ostreococcus lucimarinus CCE9901]
Length = 125
Score = 75.9 bits (185), Expect = 1e-11
Identities = 34/60 (56%), Positives = 44/60 (73%)
Frame = +3
Query: 30 KISDSEEVDEIQQRATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPKCHHKSTENS 209
++ +EEV ++RAT+ E CP CKH L +YT QLRSADEGQTVF ECPKC H ++N+
Sbjct: 68 RVGATEEVT--RERATVDEKCPKCKHKGLNFYTMQLRSADEGQTVFYECPKCSHTFSQNN 125
>ref|XP_005651569.1| hypothetical protein COCSUDRAFT_83584 [Coccomyxa subellipsoidea
C-169] gi|384253550|gb|EIE27025.1| hypothetical protein
COCSUDRAFT_83584 [Coccomyxa subellipsoidea C-169]
Length = 120
Score = 75.5 bits (184), Expect = 1e-11
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Frame = +3
Query: 3 RHLNLEPFVKISDSEEVDEIQQ---RATISEDCPNCKHPILEYYTRQLRSADEGQTVFKE 173
R NLEP VK E+ QQ RAT+ +DCP C + +EYYTRQLRSADEGQT+F E
Sbjct: 56 RRFNLEPLVKEKKKEDEFLEQQGRTRATVDDDCPKCGNHGMEYYTRQLRSADEGQTIFYE 115
Query: 174 CPKC 185
CP C
Sbjct: 116 CPNC 119
>gb|ETV95831.1| hypothetical protein H310_10875 [Aphanomyces invadans]
Length = 124
Score = 70.9 bits (172), Expect = 4e-10
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +3
Query: 69 RATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPKCHHKSTENS 209
RAT+ E CP C HP +E+YT QLRSADEGQTVF EC KC H+ + N+
Sbjct: 78 RATVEETCPKCGHPEMEFYTLQLRSADEGQTVFYECKKCGHRYSVNT 124
>gb|ETV75003.1| transcription factor S [Aphanomyces astaci]
Length = 124
Score = 70.9 bits (172), Expect = 4e-10
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +3
Query: 69 RATISEDCPNCKHPILEYYTRQLRSADEGQTVFKECPKCHHKSTENS 209
RAT+ E CP C HP +E+YT QLRSADEGQTVF EC KC H+ + N+
Sbjct: 78 RATVEETCPKCGHPEMEFYTLQLRSADEGQTVFYECKKCGHRYSVNT 124