BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012624
         (1397 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002519937.1| photosystem II protein D1 (chloroplast) [Eph...   685   0.0  
ref|YP_001876560.1| photosystem II protein D1 [Welwitschia mirab...   680   0.0  
ref|YP_002519735.1| photosystem II protein D1 [Gnetum parvifoliu...   680   0.0  
dbj|BAN16922.1| photosystem II protein D1 (chloroplast) [Gnetum ...   680   0.0  
ref|YP_001806672.1| photosystem II protein D1 [Cryptomeria japon...   677   0.0  
ref|YP_008082386.1| photosystem II protein D1 (chloroplast) [Tai...   676   0.0  
gb|AFN20138.1| photosystem II protein D1 (chloroplast) [Salvinia...   676   0.0  
gb|AFN20140.1| photosystem II protein D1 (chloroplast) [Dicranop...   676   0.0  
gb|AFN20139.1| photosystem II protein D1 (chloroplast) [Lygodium...   676   0.0  
gb|AHA12820.1| photosystem II protein D1 [Maranta leuconeura]         675   0.0  
ref|YP_008854491.1| photosystem II protein D1 [Ravenala madagasc...   675   0.0  
ref|YP_007374777.1| photosystem Q(B) protein (chloroplast) [Ophi...   675   0.0  
ref|YP_006503672.1| photosystem II protein D1 (chloroplast) [Ery...   675   0.0  
ref|YP_004021807.1| photosystem II protein D1 [Equisetum arvense...   675   0.0  
dbj|BAK86718.1| photosystem II protein D1 (chloroplast) [Sciadop...   675   0.0  
ref|YP_004891469.1| photosystem II protein D1 (chloroplast) [Tai...   675   0.0  
ref|YP_003587448.1| photosystem II reaction center protein D1 [O...   675   0.0  
gb|ABH88068.1| photosystem II protein D1 [Phaseolus vulgaris]         675   0.0  
gb|AAT57725.1| photosystem II 32 kDa protein [Frullania cf. mado...   674   0.0  
gb|AAR08485.1| photosystem II 32 kDa protein [Tetraplodon mnioides]   674   0.0  

>ref|YP_002519937.1| photosystem II protein D1 (chloroplast) [Ephedra equisetina]
            gi|220983538|dbj|BAH11305.1| photosystem II protein D1
            (chloroplast) [Ephedra equisetina]
          Length = 353

 Score =  685 bits (1768), Expect = 0.0
 Identities = 337/353 (95%), Positives = 338/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            L VACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LCVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTE+ESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTESESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 353


>ref|YP_001876560.1| photosystem II protein D1 [Welwitschia mirabilis]
            gi|163311615|gb|ABY26773.1| photosystem II protein D1
            [Welwitschia mirabilis] gi|220983407|dbj|BAH11176.1|
            photosystem II protein D1 (chloroplast) [Welwitschia
            mirabilis]
          Length = 353

 Score =  680 bits (1755), Expect = 0.0
 Identities = 333/353 (94%), Positives = 337/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESAS WGRFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESASVWGRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEA+SVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEASSVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTE+ESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTESESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAS+E NSIDG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVELNSIDG 353


>ref|YP_002519735.1| photosystem II protein D1 [Gnetum parvifolium]
            gi|512721558|ref|YP_008082178.1| photosystem II protein
            D1 (chloroplast) [Gnetum montanum]
            gi|156633559|sp|A6BM28.1|PSBA_GNEPA RecName:
            Full=Photosystem Q(B) protein; AltName: Full=32 kDa
            thylakoid membrane protein; AltName: Full=Photosystem II
            protein D1; Flags: Precursor gi|149941412|dbj|BAF64873.1|
            photosystem II protein D1 [Gnetum parvifolium]
            gi|220983477|dbj|BAH11245.1| photosystem II protein D1
            (chloroplast) [Gnetum parvifolium]
            gi|490345003|gb|AGL11023.1| photosystem II protein D1
            (chloroplast) [Gnetum montanum]
          Length = 353

 Score =  680 bits (1755), Expect = 0.0
 Identities = 333/353 (94%), Positives = 337/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESAS WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESASVWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEA+SVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEASSVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTE+ESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTESESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAS+E +SIDG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVELDSIDG 353


>dbj|BAN16922.1| photosystem II protein D1 (chloroplast) [Gnetum ula]
          Length = 353

 Score =  680 bits (1754), Expect = 0.0
 Identities = 333/353 (94%), Positives = 337/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESAS WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESASIWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEA+SVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEASSVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTE+ESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTESESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAS+E +SIDG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVELDSIDG 353


>ref|YP_001806672.1| photosystem II protein D1 [Cryptomeria japonica]
            gi|452849114|ref|YP_007474791.1| photosystem II protein
            D1 (chloroplast) [Taxus mairei]
            gi|512721475|ref|YP_008082096.1| photosystem II protein
            D1 (chloroplast) [Cunninghamia lanceolata]
            gi|568246628|ref|YP_008965173.1| photosystem II protein
            D1 (chloroplast) [Calocedrus formosana]
            gi|190360057|sp|B1VKF9.1|PSBA_CRYJA RecName:
            Full=Photosystem Q(B) protein; AltName: Full=32 kDa
            thylakoid membrane protein; AltName: Full=Photosystem II
            protein D1; Flags: Precursor gi|171854930|dbj|BAG16670.1|
            photosystem II protein D1 [Cryptomeria japonica]
            gi|239794299|dbj|BAH73296.1| photosystem II protein D1
            [Cryptomeria japonica] gi|239794381|dbj|BAH73377.1|
            photosystem II protein D1 [Cryptomeria japonica]
            gi|372863269|gb|AEX99340.1| photosystem II protein D1
            (chloroplast) [Taxus mairei] gi|372863346|gb|AEX99416.1|
            photosystem II protein D1 (chloroplast) [Taxus mairei]
            gi|372863510|gb|AEX99578.1| photosystem II protein D1
            (chloroplast) [Taxus mairei] gi|482841023|dbj|BAN16973.1|
            photosystem II protein D1 (chloroplast) [Calocedrus
            formosana] gi|490344913|gb|AGL10942.1| photosystem II
            protein D1 (chloroplast) [Cunninghamia lanceolata]
            gi|563317758|dbj|BAO19856.1| photosystem II protein D1
            (chloroplast) [Calocedrus formosana]
          Length = 353

 Score =  677 bits (1748), Expect = 0.0
 Identities = 332/353 (94%), Positives = 336/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESAS W RFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESASLWNRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA++E NSIDG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEANSIDG 353


>ref|YP_008082386.1| photosystem II protein D1 (chloroplast) [Taiwania flousiana]
            gi|490345244|gb|AGL11232.1| photosystem II protein D1
            (chloroplast) [Taiwania flousiana]
          Length = 353

 Score =  676 bits (1744), Expect = 0.0
 Identities = 330/353 (93%), Positives = 336/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESA+ W RFC+WITSTENRLYIGWFGVLM+PTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESANLWNRFCDWITSTENRLYIGWFGVLMVPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA++E NSIDG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEANSIDG 353


>gb|AFN20138.1| photosystem II protein D1 (chloroplast) [Salvinia molesta]
          Length = 353

 Score =  676 bits (1744), Expect = 0.0
 Identities = 332/353 (94%), Positives = 336/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESAS WGRFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESASLWGRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAS+E  SI+G
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVEAPSING 353


>gb|AFN20140.1| photosystem II protein D1 (chloroplast) [Dicranopteris linearis]
          Length = 353

 Score =  676 bits (1743), Expect = 0.0
 Identities = 331/353 (93%), Positives = 336/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESAS WGRFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESASLWGRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAS+E  S++G
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVEAPSVNG 353


>gb|AFN20139.1| photosystem II protein D1 (chloroplast) [Lygodium microphyllum]
          Length = 353

 Score =  676 bits (1743), Expect = 0.0
 Identities = 331/353 (93%), Positives = 336/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESAS WGRFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESASLWGRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAS+E  S++G
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASIEAPSVNG 353


>gb|AHA12820.1| photosystem II protein D1 [Maranta leuconeura]
          Length = 353

 Score =  675 bits (1742), Expect = 0.0
 Identities = 329/353 (93%), Positives = 336/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRES S WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGY+FG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYRFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA++E +SI+G
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVSSING 353


>ref|YP_008854491.1| photosystem II protein D1 [Ravenala madagascariensis]
            gi|557636979|gb|AHA12580.1| photosystem II protein D1
            [Ravenala madagascariensis]
          Length = 353

 Score =  675 bits (1742), Expect = 0.0
 Identities = 329/353 (93%), Positives = 336/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRES S WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGY+FG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYRFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA++E +SI+G
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVSSING 353


>ref|YP_007374777.1| photosystem Q(B) protein (chloroplast) [Ophioglossum californicum]
            gi|441017906|gb|AGC26690.1| photosystem Q(B) protein
            (chloroplast) [Ophioglossum californicum]
          Length = 353

 Score =  675 bits (1742), Expect = 0.0
 Identities = 330/353 (93%), Positives = 336/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESAS WGRFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAF+AAPPVDI
Sbjct: 1    MTAILERRESASLWGRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFVAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAS+E  S++G
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVEAPSVNG 353


>ref|YP_006503672.1| photosystem II protein D1 (chloroplast) [Erycina pusilla]
            gi|339431284|gb|AEJ72478.1| photosystem II protein D1
            (chloroplast) [Erycina pusilla]
          Length = 353

 Score =  675 bits (1742), Expect = 0.0
 Identities = 331/353 (93%), Positives = 334/353 (94%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRES S WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAS+E  SI+G
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVEIPSING 353


>ref|YP_004021807.1| photosystem II protein D1 [Equisetum arvense]
            gi|443329617|ref|YP_007374693.1| photosystem Q(B) protein
            (chloroplast) [Equisetum hyemale]
            gi|281371673|gb|ADA63606.1| photosystem II protein D1
            (chloroplast) [Equisetum arvense]
            gi|359751523|gb|AEV58317.1| photosystem II protein D1
            [Equisetum arvense] gi|441017808|gb|AGC26608.1|
            photosystem Q(B) protein (chloroplast) [Equisetum
            hyemale]
          Length = 353

 Score =  675 bits (1742), Expect = 0.0
 Identities = 331/353 (93%), Positives = 336/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESAS WGRFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESASLWGRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSL+YGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLIYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAS+E  SI+G
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVEAPSING 353


>dbj|BAK86718.1| photosystem II protein D1 (chloroplast) [Sciadopitys verticillata]
          Length = 353

 Score =  675 bits (1741), Expect = 0.0
 Identities = 330/353 (93%), Positives = 335/353 (94%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRES S W RFC+WITSTENRLYIGWFGV+MIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESTSLWNRFCDWITSTENRLYIGWFGVVMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA++E NSIDG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEANSIDG 353


>ref|YP_004891469.1| photosystem II protein D1 (chloroplast) [Taiwania cryptomerioides]
            gi|347977372|dbj|BAK86803.1| photosystem II protein D1
            (chloroplast) [Taiwania cryptomerioides]
          Length = 353

 Score =  675 bits (1741), Expect = 0.0
 Identities = 329/353 (93%), Positives = 336/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESA+ W RFC+WITSTENRLYIGWFGVLM+PTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESANLWNRFCDWITSTENRLYIGWFGVLMVPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERN+HNFPLDLA++E NSIDG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNSHNFPLDLAAVEANSIDG 353


>ref|YP_003587448.1| photosystem II reaction center protein D1 [Oncidium hybrid cultivar]
            gi|254833089|gb|ACT83092.1| photosystem II reaction
            center protein D1 [Oncidium hybrid cultivar]
          Length = 353

 Score =  675 bits (1741), Expect = 0.0
 Identities = 331/353 (93%), Positives = 334/353 (94%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRES S WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAS+E  SI+G
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVEVPSING 353


>gb|ABH88068.1| photosystem II protein D1 [Phaseolus vulgaris]
          Length = 359

 Score =  675 bits (1741), Expect = 0.0
 Identities = 330/354 (93%), Positives = 335/354 (94%)
 Frame = +2

Query: 230  TMTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVD 409
            TMTAILERRES S WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVD
Sbjct: 6    TMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVD 65

Query: 410  IDGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHF 589
            IDGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHF
Sbjct: 66   IDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHF 125

Query: 590  LLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGT 769
            LLGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGT
Sbjct: 126  LLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGT 185

Query: 770  FNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKF 949
            FNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+F
Sbjct: 186  FNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRF 245

Query: 950  GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNG 1129
            GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNG
Sbjct: 246  GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNG 305

Query: 1130 FNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            FNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA+ME  S++G
Sbjct: 306  FNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAMEAPSVNG 359


>gb|AAT57725.1| photosystem II 32 kDa protein [Frullania cf. madothecoides Davis 295]
            gi|119656691|gb|ABL86481.1| photosystem II 32 kDa protein
            (chloroplast) [Jubula hutchinsiae subsp. bogotensis]
            gi|134270045|emb|CAL36297.1| photosystem II 32 kDa
            protein [Jubula hutchinsiae subsp. bogotensis]
          Length = 353

 Score =  674 bits (1740), Expect = 0.0
 Identities = 330/353 (93%), Positives = 335/353 (94%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTA LERRESAS WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTATLERRESASIWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAS+E  +++G
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVEAPAVNG 353


>gb|AAR08485.1| photosystem II 32 kDa protein [Tetraplodon mnioides]
          Length = 353

 Score =  674 bits (1740), Expect = 0.0
 Identities = 329/353 (93%), Positives = 336/353 (95%)
 Frame = +2

Query: 233  MTAILERRESASAWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 412
            MTAILERRESAS WGRFC+W+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESASLWGRFCDWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 413  DGIREPVAGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 592
            DGIREPV+GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 593  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 772
            LGVACYMGREWELSFRLGMRPWI              FLIYP+GQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPLGQGSFSDGMPLGISGTF 180

Query: 773  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 952
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240

Query: 953  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1132
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1133 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASMEFNSIDG 1291
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAS+E  S++G
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVEAPSVNG 353