BLASTX nr result

ID: Ephedra28_contig00012583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012583
         (389 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006856210.1| hypothetical protein AMTR_s00059p00199900 [A...    65   1e-08
emb|CAN72113.1| hypothetical protein VITISV_009996 [Vitis vinifera]    59   5e-07
ref|XP_002281272.2| PREDICTED: serine/threonine-protein kinase S...    57   2e-06
emb|CBI32522.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_006856210.1| hypothetical protein AMTR_s00059p00199900 [Amborella trichopoda]
            gi|548860069|gb|ERN17677.1| hypothetical protein
            AMTR_s00059p00199900 [Amborella trichopoda]
          Length = 3764

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/94 (39%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
 Frame = -1

Query: 386  VCSIDGLPKASLFIS*LYCIHAFEQ--EHKLQATKNNSKESTYLVSFLHQIISQPVSSTQ 213
            V S+DGLP+A  +   L+CI+AFE+  +H      +N K+   ++S L+Q++  P++   
Sbjct: 1240 VLSLDGLPEAVGYAVQLHCIYAFEEGCKHLSIPIGSNPKQLPAMMSSLYQVVHYPINKVY 1299

Query: 212  RDFSGRIKLLRVYKFVMPK*SLTLNLSQKLIKMA 111
             D S  IK+LRV++ V P   LTL L Q+LI +A
Sbjct: 1300 EDCSLWIKILRVFRSVSPNSELTLKLFQQLITLA 1333


>emb|CAN72113.1| hypothetical protein VITISV_009996 [Vitis vinifera]
          Length = 1844

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/92 (31%), Positives = 56/92 (60%)
 Frame = -1

Query: 386  VCSIDGLPKASLFIS*LYCIHAFEQEHKLQATKNNSKESTYLVSFLHQIISQPVSSTQRD 207
            V  +DG+ +A+   + L+CI AFE+ +K + +++N K+   ++S   Q +  P++S  +D
Sbjct: 1247 VLPLDGVAEAAAHAAQLHCIFAFEEGYKHKDSQDNPKQLQSILSSYVQSVQSPINSIHQD 1306

Query: 206  FSGRIKLLRVYKFVMPK*SLTLNLSQKLIKMA 111
             +  +K+LRVY+ ++P   +TL L   L  +A
Sbjct: 1307 CNPWLKILRVYRTILPTSPVTLQLCMNLFSLA 1338


>ref|XP_002281272.2| PREDICTED: serine/threonine-protein kinase SMG1 [Vitis vinifera]
          Length = 3787

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/92 (30%), Positives = 55/92 (59%)
 Frame = -1

Query: 386  VCSIDGLPKASLFIS*LYCIHAFEQEHKLQATKNNSKESTYLVSFLHQIISQPVSSTQRD 207
            V  +DG+ +A+   + L+CI AFE+ +K + +++N K+   ++S   Q +  P++   +D
Sbjct: 1247 VLPLDGVAEAAAHAAQLHCIFAFEEGYKHKDSQDNPKQLQSILSSYVQSVQSPINRIHQD 1306

Query: 206  FSGRIKLLRVYKFVMPK*SLTLNLSQKLIKMA 111
             +  +K+LRVY+ ++P   +TL L   L  +A
Sbjct: 1307 CNPWLKILRVYRTILPTSPVTLQLCMNLFSLA 1338


>emb|CBI32522.3| unnamed protein product [Vitis vinifera]
          Length = 3305

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/92 (30%), Positives = 55/92 (59%)
 Frame = -1

Query: 386  VCSIDGLPKASLFIS*LYCIHAFEQEHKLQATKNNSKESTYLVSFLHQIISQPVSSTQRD 207
            V  +DG+ +A+   + L+CI AFE+ +K + +++N K+   ++S   Q +  P++   +D
Sbjct: 1012 VLPLDGVAEAAAHAAQLHCIFAFEEGYKHKDSQDNPKQLQSILSSYVQSVQSPINRIHQD 1071

Query: 206  FSGRIKLLRVYKFVMPK*SLTLNLSQKLIKMA 111
             +  +K+LRVY+ ++P   +TL L   L  +A
Sbjct: 1072 CNPWLKILRVYRTILPTSPVTLQLCMNLFSLA 1103


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