BLASTX nr result

ID: Ephedra28_contig00012562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012562
         (878 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006472675.1| PREDICTED: uncharacterized protein LOC102626...   249   9e-64
ref|XP_006434072.1| hypothetical protein CICLE_v10001001mg [Citr...   248   3e-63
ref|XP_006354053.1| PREDICTED: uncharacterized protein LOC102590...   245   1e-62
ref|XP_004237862.1| PREDICTED: uncharacterized protein LOC101264...   245   1e-62
ref|XP_002285818.1| PREDICTED: uncharacterized protein LOC100260...   243   7e-62
gb|ESW13116.1| hypothetical protein PHAVU_008G169200g [Phaseolus...   243   9e-62
ref|XP_002533875.1| DNA-directed RNA polymerase II, putative [Ri...   241   3e-61
ref|XP_004514262.1| PREDICTED: uncharacterized protein LOC101503...   238   2e-60
gb|EMJ26908.1| hypothetical protein PRUPE_ppa005050mg [Prunus pe...   238   3e-60
gb|EOY16120.1| DNA-directed RNA polymerase II protein isoform 1 ...   237   4e-60
ref|XP_003544777.1| PREDICTED: uncharacterized protein LOC100776...   237   4e-60
ref|XP_004138644.1| PREDICTED: uncharacterized protein LOC101217...   236   1e-59
ref|XP_003542641.1| PREDICTED: uncharacterized protein LOC100813...   235   1e-59
ref|XP_004300664.1| PREDICTED: uncharacterized protein LOC101292...   233   5e-59
ref|XP_003614901.1| hypothetical protein MTR_5g061040 [Medicago ...   230   5e-58
ref|XP_002302270.1| hypothetical protein POPTR_0002s09150g [Popu...   230   5e-58
gb|EXC06677.1| hypothetical protein L484_021513 [Morus notabilis]     229   1e-57
ref|XP_006827033.1| hypothetical protein AMTR_s00010p00224200 [A...   228   2e-57
ref|XP_006397280.1| hypothetical protein EUTSA_v10028627mg [Eutr...   221   2e-55
ref|NP_192594.2| DNA-directed RNA polymerase II protein [Arabido...   221   2e-55

>ref|XP_006472675.1| PREDICTED: uncharacterized protein LOC102626964 isoform X1 [Citrus
            sinensis] gi|568837325|ref|XP_006472676.1| PREDICTED:
            uncharacterized protein LOC102626964 isoform X2 [Citrus
            sinensis]
          Length = 478

 Score =  249 bits (636), Expect = 9e-64
 Identities = 144/287 (50%), Positives = 176/287 (61%), Gaps = 11/287 (3%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SVP +EL+ASLGYM+Q LNLV   L  P+L  SGFA SCSR+WQR SYWD+RP S+S+E+
Sbjct: 195  SVPSEELAASLGYMVQLLNLVVLNLAVPILHNSGFAGSCSRIWQRDSYWDARPSSRSNEY 254

Query: 697  PLFIPRQNSMVANQE------ASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPRQN    + E      +S NFGVASMES R P                   S++T
Sbjct: 255  PLFIPRQNYCSTSGENSWTDRSSSNFGVASMESERRP-QLDSSRSTSFNYTSASTHSVET 313

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSSK 359
             KD+Q+GI LLKKSVAC+TAYC+N      P + STFEAFAK+L T  SSKE R++ S K
Sbjct: 314  HKDLQKGISLLKKSVACLTAYCYNSLCLDVPAEASTFEAFAKLLATLSSSKEVRSVFSLK 373

Query: 358  ETKSRSKRNTQPSIR----LNDCVADXXXXXXXXXXXKYTRTEMTGTRIGLSHTRSFLNV 191
               SRS +  Q   R    +N  ++             +  T+        S   SFL  
Sbjct: 374  MACSRSCKQVQKLNRSVWNMNSAISS---TTLLESAHMFPITKNLSDNNLPSSAASFLYA 430

Query: 190  NEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
             E+SD GKN++LID WD++E PT PPPPS TEDVEHWTRAMIIDA K
Sbjct: 431  TEMSDIGKNESLIDGWDLVEHPTFPPPPSQTEDVEHWTRAMIIDATK 477


>ref|XP_006434072.1| hypothetical protein CICLE_v10001001mg [Citrus clementina]
            gi|567883029|ref|XP_006434073.1| hypothetical protein
            CICLE_v10001001mg [Citrus clementina]
            gi|567883031|ref|XP_006434074.1| hypothetical protein
            CICLE_v10001001mg [Citrus clementina]
            gi|567883033|ref|XP_006434075.1| hypothetical protein
            CICLE_v10001001mg [Citrus clementina]
            gi|557536194|gb|ESR47312.1| hypothetical protein
            CICLE_v10001001mg [Citrus clementina]
            gi|557536195|gb|ESR47313.1| hypothetical protein
            CICLE_v10001001mg [Citrus clementina]
            gi|557536196|gb|ESR47314.1| hypothetical protein
            CICLE_v10001001mg [Citrus clementina]
            gi|557536197|gb|ESR47315.1| hypothetical protein
            CICLE_v10001001mg [Citrus clementina]
          Length = 478

 Score =  248 bits (632), Expect = 3e-63
 Identities = 143/287 (49%), Positives = 176/287 (61%), Gaps = 11/287 (3%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SVP +EL+ASLGYM+Q LNLV   L  P+L  SGFA SCSR+WQR SYWD+RP S+S+E+
Sbjct: 195  SVPSEELAASLGYMVQLLNLVVLNLAVPVLHNSGFAGSCSRIWQRDSYWDARPSSRSNEY 254

Query: 697  PLFIPRQNSMVANQE------ASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPRQN    + E      +S NFGVASMES R P                   S++T
Sbjct: 255  PLFIPRQNYCSTSGENSWTDRSSSNFGVASMESERRP-QLDSSRSASFNYTSASTHSVET 313

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVLTFIS-SKEARNILSSK 359
             KD+Q+GI LLKKSVAC+TAYC+N      P + STFEAFAK+L  +S SKE R++ S K
Sbjct: 314  HKDLQKGISLLKKSVACLTAYCYNSLCLDVPAEASTFEAFAKLLATLSLSKEVRSVFSLK 373

Query: 358  ETKSRSKRNTQPSIR----LNDCVADXXXXXXXXXXXKYTRTEMTGTRIGLSHTRSFLNV 191
               SRS +  Q   R    +N  ++             +  T+        S   SFL  
Sbjct: 374  MACSRSCKQVQKLNRSVWNMNSAISS---TTLLESAHMFPITKNLSDNNLPSSAASFLYA 430

Query: 190  NEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
             E+SD GKN++LID WD++E PT PPPPS TEDVEHWTRAMIIDA K
Sbjct: 431  TEMSDIGKNESLIDGWDLVEHPTFPPPPSQTEDVEHWTRAMIIDATK 477


>ref|XP_006354053.1| PREDICTED: uncharacterized protein LOC102590673 isoform X1 [Solanum
            tuberosum] gi|565375051|ref|XP_006354054.1| PREDICTED:
            uncharacterized protein LOC102590673 isoform X2 [Solanum
            tuberosum]
          Length = 483

 Score =  245 bits (626), Expect = 1e-62
 Identities = 141/289 (48%), Positives = 171/289 (59%), Gaps = 13/289 (4%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SVP DELSASLGYM+Q LNLV   + AP L  SGFA SCSR+WQR SYWD+RP S+S E+
Sbjct: 195  SVPSDELSASLGYMVQLLNLVIRCVCAPALHNSGFAGSCSRIWQRDSYWDARPSSRSGEY 254

Query: 697  PLFIPRQNSMVANQEAS------------GNFGVASMESPRIPXXXXXXXXXXXXXXXXF 554
            PLFIPRQN   +  EAS             NFGV SMES R P                 
Sbjct: 255  PLFIPRQNFCSSGGEASWYDRSCSNSGTSSNFGVTSMESDRKPRLDSSSSSSFNYASAS- 313

Query: 553  IRSLQTDKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEAR 377
            + S++T KD+Q+GI LLKKSVACITAYC+N      P + STFE FA++L T  SSKE R
Sbjct: 314  LHSIETHKDLQKGIALLKKSVACITAYCYNTLCLEVPAEASTFETFARLLATLSSSKEVR 373

Query: 376  NILSSKETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIGLSHTRSFL 197
            ++ S K + SR+ +  QP  +    V                    T      S + + +
Sbjct: 374  SVFSLKMSGSRASKQVQPLNKSVWNVDSAGSSSTLMESGHVPVLRNTFENALPSSSGNLI 433

Query: 196  NVNEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
               EVSDA +N+NLI++WD+IE P  PPPPSHTEDVEHWTRAM IDA K
Sbjct: 434  YATEVSDARRNENLIEDWDLIEHPPFPPPPSHTEDVEHWTRAMFIDATK 482


>ref|XP_004237862.1| PREDICTED: uncharacterized protein LOC101264619 [Solanum
            lycopersicum]
          Length = 481

 Score =  245 bits (626), Expect = 1e-62
 Identities = 142/290 (48%), Positives = 173/290 (59%), Gaps = 14/290 (4%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SVP DELSASLGYM+Q LNLV   + AP L  SGFA SCSR+WQR SYWD+RP S+S E+
Sbjct: 195  SVPSDELSASLGYMVQLLNLVVRCVCAPALHNSGFAGSCSRIWQRDSYWDARPSSRSGEY 254

Query: 697  PLFIPRQNSMVANQEA------------SGNFGVASMESPRIPXXXXXXXXXXXXXXXXF 554
            PLFIPRQN   +  EA            S NFGV SMES R P                 
Sbjct: 255  PLFIPRQNFCSSGGEASWYDRSSSNSGTSSNFGVTSMESDRKP-RLDSSSSSSFNYASAS 313

Query: 553  IRSLQTDKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEAR 377
            + S++T KD+Q+GI LLKKSVACITAYC+N      P + STFE FA++L T  SSKE R
Sbjct: 314  LHSIETHKDLQKGIALLKKSVACITAYCYNTLCLEVPAEASTFETFARLLATLSSSKEVR 373

Query: 376  NILSSKETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIGL-SHTRSF 200
            ++ S K + SR+ +  QP   LN  V +           +            L S   + 
Sbjct: 374  SVFSLKMSGSRASKQVQP---LNKSVWNVDSAGSSSTLMESGHVPRNTFEKSLPSSGGNL 430

Query: 199  LNVNEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
            +   EVS+ G+N+NLI++WD+IE P  PPPPSHTEDVEHWTRAM IDA K
Sbjct: 431  MYATEVSNVGRNENLIEDWDLIEHPPFPPPPSHTEDVEHWTRAMFIDATK 480


>ref|XP_002285818.1| PREDICTED: uncharacterized protein LOC100260778 [Vitis vinifera]
            gi|302141899|emb|CBI19102.3| unnamed protein product
            [Vitis vinifera]
          Length = 478

 Score =  243 bits (620), Expect = 7e-62
 Identities = 140/287 (48%), Positives = 176/287 (61%), Gaps = 11/287 (3%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SVP DEL+ASLGYM+Q LNLV   L AP L  SGFA SCSR+WQR SYW+ RP S+S+E+
Sbjct: 195  SVPSDELAASLGYMVQLLNLVVYNLAAPALHNSGFAGSCSRIWQRESYWNPRPSSRSNEY 254

Query: 697  PLFIPRQNSMVANQE------ASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPRQN    N E      +S NFG+ASMES R P                 + S++T
Sbjct: 255  PLFIPRQNLCSTNGENSWSERSSSNFGIASMESDRKP-RLESSGSSSFNYSSASLHSVET 313

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVLTFI-SSKEARNILSSK 359
             KD+Q+GI LLKKSVAC+T YC++      PT+ STFEAFAK+L  + SSKE R++ S K
Sbjct: 314  HKDLQKGISLLKKSVACLTTYCYSSLCLDVPTEASTFEAFAKLLAILSSSKEVRSVFSLK 373

Query: 358  ETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIGLSH----TRSFLNV 191
               SRS +  Q   +LN  + +           +   T      I  ++      SFL  
Sbjct: 374  MACSRSCKQVQ---QLNKSIWNMNSAISSSTLLESAHTLPMTRNIFDNNLPNSAASFLYT 430

Query: 190  NEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
             E+SD GKN++LI+EWD++E    PPPPS TED+EHWTRAMIIDA K
Sbjct: 431  TEMSDIGKNESLIEEWDLVEHANFPPPPSQTEDIEHWTRAMIIDATK 477


>gb|ESW13116.1| hypothetical protein PHAVU_008G169200g [Phaseolus vulgaris]
            gi|561014256|gb|ESW13117.1| hypothetical protein
            PHAVU_008G169200g [Phaseolus vulgaris]
          Length = 476

 Score =  243 bits (619), Expect = 9e-62
 Identities = 145/287 (50%), Positives = 183/287 (63%), Gaps = 11/287 (3%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SVP +ELSASLGYM+Q LNLV   L AP L  SGFA SCSR+WQR SYWD+RP S+S+E+
Sbjct: 195  SVPSEELSASLGYMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEY 254

Query: 697  PLFIPRQN-------SMVANQEASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQ 539
            PLFIPRQN       +  +  ++S NFGVASMES +                   + S+Q
Sbjct: 255  PLFIPRQNYCSTAGENSWSTDKSSSNFGVASMESEK-RNRLDSSGNSNFNYSLASLHSVQ 313

Query: 538  TDKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSS 362
            T KD+Q+GI LLKKSVACITAYC+N     +P++ STFE+FAK+L T  SSKE R++ S 
Sbjct: 314  THKDLQKGISLLKKSVACITAYCYNSLCLDAPSEASTFESFAKLLATLSSSKEVRSVFSL 373

Query: 361  KETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIG---LSHTRSFLNV 191
            K  +SR+ +  Q   +LN  V +           +   +  T TRI     S T SFL  
Sbjct: 374  KMAQSRTCKQVQ---QLNKSVWNMNSVISSTTLLESAHSVPT-TRIENYLPSSTASFLYA 429

Query: 190  NEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
             +++D GKN+ LI+ WDIIE PT PPPPS +EDVEHWTRAM IDAK+
Sbjct: 430  TDLND-GKNECLIEGWDIIEHPTFPPPPSQSEDVEHWTRAMFIDAKR 475


>ref|XP_002533875.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
            gi|223526176|gb|EEF28506.1| DNA-directed RNA polymerase
            II, putative [Ricinus communis]
          Length = 478

 Score =  241 bits (615), Expect = 3e-61
 Identities = 141/287 (49%), Positives = 176/287 (61%), Gaps = 11/287 (3%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            S+P +EL+ASLGYM+Q LNLV   L AP L  SGFA SCSR+WQR SYW++RP S+S+E+
Sbjct: 195  SIPSEELAASLGYMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRDSYWNARPSSRSNEY 254

Query: 697  PLFIPRQNSMVANQE------ASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPRQ     + E      +S NFGVASMES R                     S++T
Sbjct: 255  PLFIPRQRYCSTSGENSWTDRSSSNFGVASMESERRARLDSSRSSSFNYNSASP-HSVET 313

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSSK 359
             KD+Q+GI L+KKSVAC+TAY +N+     P + STFEAFAK+L T  SSKE R++ S K
Sbjct: 314  HKDLQKGISLMKKSVACVTAYGYNLLCLDVPAEASTFEAFAKLLATLSSSKEVRSVFSLK 373

Query: 358  ETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIGLSHTR----SFLNV 191
               SRS +  Q   +LN  V +           +          I  ++ R    SFL  
Sbjct: 374  MACSRSCKQVQ---KLNKSVWNVNSIISSSTLMESAHAPHLTKNINDNNLRNSATSFLFA 430

Query: 190  NEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
            NE+SDAGKN++LID WD++E PT PPPPS TEDVEHWTRAM IDA K
Sbjct: 431  NEISDAGKNESLIDGWDLVEHPTFPPPPSQTEDVEHWTRAMFIDATK 477


>ref|XP_004514262.1| PREDICTED: uncharacterized protein LOC101503483 isoform X1 [Cicer
           arietinum]
          Length = 427

 Score =  238 bits (607), Expect = 2e-60
 Identities = 146/286 (51%), Positives = 177/286 (61%), Gaps = 10/286 (3%)
 Frame = -2

Query: 877 SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
           SVP + LS SLGYM+Q LNLV   L AP L  SGFA SCSR+WQR SYWD+RP S+S+E+
Sbjct: 147 SVPSEALSTSLGYMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEY 206

Query: 697 PLFIPRQNSMVANQE------ASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
           PLFIPRQN    + E      +S NFGVASMES R P                   S+QT
Sbjct: 207 PLFIPRQNYCSTSGENSWSDKSSSNFGVASMESDRRPRLDSSGSSSFNYSLGSS-HSVQT 265

Query: 535 DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSSK 359
            KD+Q+GI LLKKSVACITAYC+N      P + STFEAFAK+L T  SSKE R++ S K
Sbjct: 266 HKDLQKGISLLKKSVACITAYCYNSLCLDVPIEASTFEAFAKLLATLSSSKEVRSVFSLK 325

Query: 358 ETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIG---LSHTRSFLNVN 188
             +SR+ +  Q   +LN  V +           +   +  T TRI     S   SFL   
Sbjct: 326 MARSRTCKQVQ---QLNKSVWNMNSAISSTTLLESAHSVPT-TRIENYMPSSAASFLYPT 381

Query: 187 EVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
           + SD GK++ LI+ WDI+E PTLPPPPS +EDVEHWTRAM IDAK+
Sbjct: 382 DSSD-GKSECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKR 426


>gb|EMJ26908.1| hypothetical protein PRUPE_ppa005050mg [Prunus persica]
            gi|462422646|gb|EMJ26909.1| hypothetical protein
            PRUPE_ppa005050mg [Prunus persica]
          Length = 479

 Score =  238 bits (606), Expect = 3e-60
 Identities = 139/287 (48%), Positives = 177/287 (61%), Gaps = 11/287 (3%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SVP +EL+ASLGYM+Q LNLV   L AP L  SGFA SCSR+WQR SYWD+RP S+S+E+
Sbjct: 196  SVPSEELAASLGYMVQLLNLVVQNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEY 255

Query: 697  PLFIPRQNSMVANQE------ASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPRQN    + E      +S NFGVAS++S R P                   S++T
Sbjct: 256  PLFIPRQNYCSTSGENSWSDRSSSNFGVASIDSERKPHLDSSGSSSFNYTSASQ-HSVET 314

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSSK 359
             KD+QRGI LLKKSVACITAYC+N      P++ STFEAFAK+L T  SSKE  ++ S K
Sbjct: 315  HKDLQRGISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLLATLSSSKEVHSVFSLK 374

Query: 358  ETKSRSKRNTQPSIRLNDCV----ADXXXXXXXXXXXKYTRTEMTGTRIGLSHTRSFLNV 191
               SRS +  Q   +LN  V    +              T T+        ++  S L  
Sbjct: 375  MACSRSCKQVQ---QLNKSVWNVNSAISSTTLLDSAHAMTMTKNLYEYNLPTYATSSLCS 431

Query: 190  NEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
             E+SD+GKN++L++ WD++E PT PPPPS +ED+EHWTRAM IDAK+
Sbjct: 432  TELSDSGKNESLVEGWDLVEHPTFPPPPSQSEDIEHWTRAMFIDAKR 478


>gb|EOY16120.1| DNA-directed RNA polymerase II protein isoform 1 [Theobroma cacao]
          Length = 479

 Score =  237 bits (605), Expect = 4e-60
 Identities = 139/287 (48%), Positives = 175/287 (60%), Gaps = 11/287 (3%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SVP ++L+ASLGYM+Q LNLV   L AP L  SGFA SCSR+WQR SYW++RP S+S+E+
Sbjct: 196  SVPSEQLAASLGYMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRDSYWNARPSSRSNEY 255

Query: 697  PLFIPRQNSMVANQE------ASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPRQN    + +      +S NFGVASMES R P                   +++T
Sbjct: 256  PLFIPRQNYCSTSGDNSWTDRSSSNFGVASMESERRPRLDSSGSNSFNYSSASS-HTVET 314

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVLTFISS-KEARNILSSK 359
             KD+Q GI LLKKSVACITA+C+N      PT+ STFEAF+K+L  +SS KE R++ S K
Sbjct: 315  HKDLQIGISLLKKSVACITAFCYNSLCLDVPTEASTFEAFSKLLATLSSTKEVRSVFSLK 374

Query: 358  ETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTR----TEMTGTRIGLSHTRSFLNV 191
               SRS +  Q   +LN  V +           +       T+        S   SFL  
Sbjct: 375  MACSRSSKQAQ---QLNKSVWNVNSAMSSSMLLESAHMLPLTKNLSDHNLPSSAASFLFA 431

Query: 190  NEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
             E+ D GKN++LI+EWD++E PT PPPPS TEDVEHWTRAM IDA K
Sbjct: 432  TEMPDIGKNESLIEEWDLVEHPTFPPPPSQTEDVEHWTRAMFIDATK 478


>ref|XP_003544777.1| PREDICTED: uncharacterized protein LOC100776426 isoformX1 [Glycine
            max]
          Length = 475

 Score =  237 bits (605), Expect = 4e-60
 Identities = 145/285 (50%), Positives = 177/285 (62%), Gaps = 10/285 (3%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SVP +ELS SLGYM+Q LNLV   L AP L  SGFA SCSR+WQR SYWD+RP S+S+E+
Sbjct: 195  SVPSEELSTSLGYMVQLLNLVIHNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEY 254

Query: 697  PLFIPRQNSMVANQE------ASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPRQN    + E      +S NFGVAS+ES R                     S+QT
Sbjct: 255  PLFIPRQNYCSTDGENSWSERSSSNFGVASVESER-RHRLDSSGSTSFNYSLASSHSVQT 313

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSSK 359
             KD+Q+GI LLKKSV CITAYC+N      P++ STFEAFAK+L T  SSKE R++ S K
Sbjct: 314  HKDLQKGISLLKKSVVCITAYCYNSLCLDVPSEASTFEAFAKLLATLASSKEVRSVFSLK 373

Query: 358  ETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIG---LSHTRSFLNVN 188
              +SR+ +  Q   +LN  V +           +   +  T TRI     S T SFL   
Sbjct: 374  MARSRTCKQVQ---QLNKSVWNMNSAISSTTLLESAHSVPT-TRIENYLPSSTGSFLYAA 429

Query: 187  EVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAK 53
            ++SD GKN+ LI+ WDI+E PT PPPPS +EDVEHWTRAM IDAK
Sbjct: 430  DLSD-GKNECLIEGWDIVEHPTFPPPPSQSEDVEHWTRAMFIDAK 473


>ref|XP_004138644.1| PREDICTED: uncharacterized protein LOC101217421 [Cucumis sativus]
            gi|449524750|ref|XP_004169384.1| PREDICTED:
            uncharacterized LOC101217421 [Cucumis sativus]
          Length = 476

 Score =  236 bits (601), Expect = 1e-59
 Identities = 137/286 (47%), Positives = 173/286 (60%), Gaps = 10/286 (3%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SV P ELSASLGYM+Q LNLV  YL AP L TSGFA SCSR+WQR SYW++ P S+S+E+
Sbjct: 195  SVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQRDSYWNACPSSRSNEY 254

Query: 697  PLFIPRQNSMVANQE------ASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            P+F+PRQ+    + E      +S NFGVAS+ES R P                   S+++
Sbjct: 255  PVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENRSFNYSSASP-HSIES 313

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSSK 359
             KD+Q+GI LLKKSVAC+TAY +N      P++ STFEAFAK+L T  SSKE R++ S K
Sbjct: 314  HKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLATLSSSKEVRSVFSLK 373

Query: 358  ETKSRSKRNTQPSIRLN---DCVADXXXXXXXXXXXKYTRTEMTGTRIGLSHTRSFLNVN 188
               SRS ++ Q  I+     + +A              T  E        S   S+L   
Sbjct: 374  MASSRSTKHIQKPIKSTWNVNSIASSMLFESGHSQIMKTNYESNLP----SSASSYLYAT 429

Query: 187  EVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
            E SD GKND+ I+ WD++E PT PPPPS  ED+EHWTRAMIIDA K
Sbjct: 430  EFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATK 475


>ref|XP_003542641.1| PREDICTED: uncharacterized protein LOC100813297 [Glycine max]
          Length = 474

 Score =  235 bits (600), Expect = 1e-59
 Identities = 144/286 (50%), Positives = 178/286 (62%), Gaps = 10/286 (3%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SVP +ELS SLGYM+Q LNL+   L AP L  SGFA SCSR+WQR SYWD+RP S+S+E+
Sbjct: 195  SVPSEELSTSLGYMVQLLNLIVHNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEY 254

Query: 697  PLFIPRQNSMVA------NQEASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPRQN          ++ +S NFGVASMES R                     S+QT
Sbjct: 255  PLFIPRQNYCSTGGENSWSERSSSNFGVASMESER-RHRLDSSGSSSFNYSLASSHSVQT 313

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSSK 359
             KD+Q+GI LLKKSVACITAYC+N      P++ STFEAFAK+L T  SSKE R++ S K
Sbjct: 314  HKDLQKGISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLLATLSSSKEVRSVFSLK 373

Query: 358  ETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIG---LSHTRSFLNVN 188
              +SR+ +  Q   +LN  V +           +   +  T TRI     S T SFL   
Sbjct: 374  MPRSRTCKQVQ---QLNKSVWNMNSAISSTTLLESAHSVPT-TRIENYLPSATASFLYAT 429

Query: 187  EVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
            + SD GKN+ L++ WDI+E PT PPPPS +EDVEHWTRAM IDAK+
Sbjct: 430  D-SD-GKNECLVEGWDIVEHPTFPPPPSQSEDVEHWTRAMFIDAKR 473


>ref|XP_004300664.1| PREDICTED: uncharacterized protein LOC101292418 [Fragaria vesca
            subsp. vesca]
          Length = 478

 Score =  233 bits (595), Expect = 5e-59
 Identities = 142/288 (49%), Positives = 176/288 (61%), Gaps = 12/288 (4%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SVP +EL+ASLGYM+Q LNLV   L AP L  SGFA SCSR+WQR SYWD+RP S+S+E+
Sbjct: 196  SVPSEELAASLGYMVQLLNLVVQNLGAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEY 255

Query: 697  PLFIPRQNSMVANQE------ASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPRQN    + E      +S NFGVAS+ES R P                   S++T
Sbjct: 256  PLFIPRQNYCSTSGENSWSDRSSSNFGVASIESERKPRLDSSGSSSFNYSSASQ-HSVET 314

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSSK 359
             KD+QRGI LLKKSVACITAYC+N      P++ STFEAFAK+L T  SSKE  ++ S K
Sbjct: 315  HKDLQRGISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLLSTLSSSKEVHSVFSLK 374

Query: 358  ETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIGL-----SHTRSFLN 194
               SRS +  Q   +LN  V +               T MT T+        ++  SFL+
Sbjct: 375  MACSRSCKQVQ---QLNKSVWNVNSAISSTTLLDSAHT-MTMTKNFYENNIPNYATSFLS 430

Query: 193  VNEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
              E+SD GKN+  I+ WD++E PTL PPPS +ED+EHWTRAM ID  K
Sbjct: 431  STEMSDVGKNECTIEGWDLVEHPTL-PPPSQSEDIEHWTRAMFIDVTK 477


>ref|XP_003614901.1| hypothetical protein MTR_5g061040 [Medicago truncatula]
            gi|355516236|gb|AES97859.1| hypothetical protein
            MTR_5g061040 [Medicago truncatula]
          Length = 501

 Score =  230 bits (587), Expect = 5e-58
 Identities = 146/298 (48%), Positives = 181/298 (60%), Gaps = 23/298 (7%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQ---- 710
            SVP +ELSASLGYM+Q LNLVA  L AP L  SGFA SCSR+WQR SYWD+RP S+    
Sbjct: 195  SVPSEELSASLGYMVQLLNLVAHNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSKNF 254

Query: 709  ---------SHEHPLFIPRQNSMVA------NQEASGNFGVASMESPRIPXXXXXXXXXX 575
                     S+E+PLFIPRQN          ++++S NFGVASMES R P          
Sbjct: 255  FNLKYSLFFSNEYPLFIPRQNYCSTSGENSWSEKSSSNFGVASMESDRRPRLDSSGSSSF 314

Query: 574  XXXXXXFIRSLQTDKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TF 398
                     S+Q+ KD+Q+GI LLKKSVACITAYC+N      P++ STFEAFAK+L T 
Sbjct: 315  NYSLASS-HSVQSHKDLQKGISLLKKSVACITAYCYNSLCFDIPSEASTFEAFAKLLATL 373

Query: 397  ISSKEARNILSSKETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIG- 221
             SSKE R++ S K  +SR+ +  Q   +LN  V +           + T +  T TRI  
Sbjct: 374  SSSKEVRSVFSLKMARSRTCKQVQ---QLNKSVWNMNSANSSTTLLESTHSVPT-TRIEN 429

Query: 220  --LSHTRSFLNVNEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAK 53
               +   SFL   + SD  K++ LI+ WDI+E PTLPPPPS +EDVEHWTRAM IDAK
Sbjct: 430  YMPNSAASFLYPTDSSDR-KSECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAK 486


>ref|XP_002302270.1| hypothetical protein POPTR_0002s09150g [Populus trichocarpa]
            gi|566157047|ref|XP_006386388.1| hypothetical protein
            POPTR_0002s09150g [Populus trichocarpa]
            gi|566157050|ref|XP_006386389.1| hypothetical protein
            POPTR_0002s09150g [Populus trichocarpa]
            gi|222843996|gb|EEE81543.1| hypothetical protein
            POPTR_0002s09150g [Populus trichocarpa]
            gi|550344610|gb|ERP64185.1| hypothetical protein
            POPTR_0002s09150g [Populus trichocarpa]
            gi|550344611|gb|ERP64186.1| hypothetical protein
            POPTR_0002s09150g [Populus trichocarpa]
          Length = 475

 Score =  230 bits (587), Expect = 5e-58
 Identities = 134/287 (46%), Positives = 171/287 (59%), Gaps = 11/287 (3%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SV  +EL+ASLGYM+Q LNLVA  L AP L  +GFA SCSR+WQR SYW++ P S+S+E+
Sbjct: 193  SVSSEELAASLGYMVQLLNLVAHNLAAPTLHNAGFAGSCSRIWQRDSYWNACPSSRSNEY 252

Query: 697  PLFIPRQNSMVANQE------ASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPRQN    + E      +S NFGVASMES R P                   S++T
Sbjct: 253  PLFIPRQNYCSTSSENSWTDKSSSNFGVASMESERRPHLDSTRSNSFNYSSVSP-HSVET 311

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSSK 359
             KD+Q+G+ LLKKSVAC+TAYC+N+     P+D STFEAFAK+L T  SSKE R++ + K
Sbjct: 312  HKDLQKGVSLLKKSVACVTAYCYNLLCLDVPSDTSTFEAFAKLLSTLSSSKEVRSVFNLK 371

Query: 358  ETKSRSKRNTQPSIR----LNDCVADXXXXXXXXXXXKYTRTEMTGTRIGLSHTRSFLNV 191
               SRS +  Q   +    +N  ++                T         +   SFL  
Sbjct: 372  MACSRSCKQVQKLNKSVWNVNSAISSSALLESAHALQLMKNTSDNNLP---NSAASFLFA 428

Query: 190  NEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
              +SD GKN++ ID WD++E PT PPPPS  ED+EHWTRAM IDA K
Sbjct: 429  TGISD-GKNESFIDGWDLVEHPTFPPPPSQVEDIEHWTRAMFIDATK 474


>gb|EXC06677.1| hypothetical protein L484_021513 [Morus notabilis]
          Length = 478

 Score =  229 bits (583), Expect = 1e-57
 Identities = 139/287 (48%), Positives = 170/287 (59%), Gaps = 11/287 (3%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SV  +EL ASLGYM+Q LNL+   L AP L  SGFA S SR+WQR SYWD+RP S+S+E+
Sbjct: 195  SVASEELGASLGYMVQLLNLIVRILAAPALHNSGFAGSNSRIWQRDSYWDARPSSRSNEY 254

Query: 697  PLFIPRQNSMVANQE------ASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPRQN    + E      +S NFGV S+ES R                     S++T
Sbjct: 255  PLFIPRQNYCSTSVENSWSDRSSSNFGVTSIESER-KVRLDSSGSNSFNYSSASPHSIET 313

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSSK 359
             KD+Q+GI LLKKSVACIT YC+N      P++ STFEAFAK+L T  SSKE R++ S K
Sbjct: 314  HKDLQKGISLLKKSVACITTYCYNSLCLDVPSEASTFEAFAKLLATLSSSKELRSVCSIK 373

Query: 358  ETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIGLSH----TRSFLNV 191
               SRS +  Q   +LN  V +               T  +   IG ++      SFL  
Sbjct: 374  SACSRSNKQVQ---QLNKSVWNVNSAFASTTLLDSAHTVASMKNIGENNLPNPATSFLYA 430

Query: 190  NEVSDAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
             E SDAGKN+ +I+ WD+IE PT PPPPS  EDVEHWTRAM IDA K
Sbjct: 431  TE-SDAGKNEFIIEGWDLIEHPTFPPPPSQCEDVEHWTRAMFIDATK 476


>ref|XP_006827033.1| hypothetical protein AMTR_s00010p00224200 [Amborella trichopoda]
            gi|548831462|gb|ERM94270.1| hypothetical protein
            AMTR_s00010p00224200 [Amborella trichopoda]
          Length = 487

 Score =  228 bits (582), Expect = 2e-57
 Identities = 133/279 (47%), Positives = 169/279 (60%), Gaps = 3/279 (1%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            SV  +EL+ASLGYM+  ++LVA YL AP+L  SGFA SCSR+WQR SYWD  P SQ+ E+
Sbjct: 199  SVQSEELAASLGYMVHLVDLVAWYLRAPILHNSGFAGSCSRIWQRNSYWDVSPASQNKEY 258

Query: 697  PLFIPRQNSMVANQEASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQTDKDVQR 518
            PLFIPRQNS   N E+S NFGVASMES + P                   S++T KD+Q+
Sbjct: 259  PLFIPRQNSCAVNAESS-NFGVASMESEKKPHVDGVGSISFNYSSASP-HSVETHKDLQK 316

Query: 517  GILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVLTFISSKEARNILSSKETKSRSK 338
            GI LLKKSVACITAYC N      P+++STFEAFAK+L  I +K+     +SK   SRS+
Sbjct: 317  GISLLKKSVACITAYCCNTLCLDFPSEMSTFEAFAKLLQTIGAKKEVQSFTSKIACSRSR 376

Query: 337  RNTQP---SIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIGLSHTRSFLNVNEVSDAGK 167
            +  Q    S+     + +            +  +     + G S   SFL  NE + + K
Sbjct: 377  KPVQQVNTSVLQEQYLINSVTSSYCLEGSAHAPSIKPDKQKGRSDM-SFLYTNEATISKK 435

Query: 166  NDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
             D L++ WDI+E P LPP PS +EDVEHWTRAM IDA K
Sbjct: 436  GDCLVEGWDIVEHPPLPPRPSESEDVEHWTRAMFIDATK 474


>ref|XP_006397280.1| hypothetical protein EUTSA_v10028627mg [Eutrema salsugineum]
            gi|557098297|gb|ESQ38733.1| hypothetical protein
            EUTSA_v10028627mg [Eutrema salsugineum]
          Length = 474

 Score =  221 bits (564), Expect = 2e-55
 Identities = 129/283 (45%), Positives = 170/283 (60%), Gaps = 7/283 (2%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            S+P +EL+ASLG M+Q LNLV   L AP L  SGFA SCSR+WQR SYWD+RP ++S+E+
Sbjct: 195  SIPSEELAASLGLMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRDSYWDARPSTRSNEY 254

Query: 697  PLFIPRQN---SMVAN---QEASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPRQN   + V N    + S NFGVASMES R                     S+++
Sbjct: 255  PLFIPRQNYCSTSVENSWTDKNSSNFGVASMESDRKEARLDSTGRNSFNYSSASPHSVES 314

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSSK 359
             +D+Q+GI LLKKSVAC+TAYC+N      P + STFEAFAK+L T  SSKE R++ S K
Sbjct: 315  HRDLQKGIALLKKSVACLTAYCYNSLCLEVPPEASTFEAFAKLLATLSSSKEVRSVFSLK 374

Query: 358  ETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIGLSHTRSFLNVNEVS 179
               SRS +  Q   +LN  + +                         +   S+L+  E+S
Sbjct: 375  MASSRSCKQAQ---QLNKSIWNAHSVISSSILESSHLPRNASYNQDPNSAASYLSGTELS 431

Query: 178  DAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
            +  K++++ + WD++E P  PPPPS +EDVEHWTRAM IDAKK
Sbjct: 432  EIRKSNDM-NGWDLVEHPKYPPPPSQSEDVEHWTRAMFIDAKK 473


>ref|NP_192594.2| DNA-directed RNA polymerase II protein [Arabidopsis thaliana]
            gi|23297675|gb|AAN13006.1| unknown protein [Arabidopsis
            thaliana] gi|332657255|gb|AEE82655.1| DNA-directed RNA
            polymerase II protein [Arabidopsis thaliana]
          Length = 473

 Score =  221 bits (564), Expect = 2e-55
 Identities = 129/283 (45%), Positives = 167/283 (59%), Gaps = 7/283 (2%)
 Frame = -2

Query: 877  SVPPDELSASLGYMLQFLNLVACYLYAPLLLTSGFAASCSRVWQRASYWDSRPFSQSHEH 698
            S+P +EL+ SLGYM+Q LNLV   L AP L +SGFA SCSR+WQR SYWD R  ++S+E+
Sbjct: 195  SIPSEELAVSLGYMVQLLNLVVHNLAAPALHSSGFAGSCSRIWQRDSYWDGRTSTRSNEY 254

Query: 697  PLFIPRQN---SMVAN---QEASGNFGVASMESPRIPXXXXXXXXXXXXXXXXFIRSLQT 536
            PLFIPR+N   + V N    + S NFGVASMES R                     S+++
Sbjct: 255  PLFIPRRNYCSTSVENSWTDKNSSNFGVASMESDRKEPRLDSPGSNSFKYSSASPHSIES 314

Query: 535  DKDVQRGILLLKKSVACITAYCFNVFYCVSPTDISTFEAFAKVL-TFISSKEARNILSSK 359
             +D+Q+GI LLKKSVAC+TAYC+N      P + STFEAFAK+L T  SSKE R++ S K
Sbjct: 315  HRDLQKGIALLKKSVACLTAYCYNSLCLEVPPEASTFEAFAKLLATLSSSKEVRSVFSLK 374

Query: 358  ETKSRSKRNTQPSIRLNDCVADXXXXXXXXXXXKYTRTEMTGTRIGLSHTRSFLNVNEVS 179
               SRS +  Q   +LN  + +                  T      +   S+L+  E+S
Sbjct: 375  MASSRSGKQAQ---QLNKSIWNAHSVISSSLLESAHLPRNTSYNQDPNSPASYLSATELS 431

Query: 178  DAGKNDNLIDEWDIIERPTLPPPPSHTEDVEHWTRAMIIDAKK 50
                ND  ++ WD++E P  PPPPS +EDVEHWTRAM IDAKK
Sbjct: 432  TRKNND--MNGWDLVEHPKYPPPPSQSEDVEHWTRAMFIDAKK 472


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